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At least 883 records · Page 49

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DOE OSTI2020

Machine learning with bond information for local structure optimizations in surface science

Local optimization of adsorption systems inherently involves different scales: within the substrate, within the molecule, and between the molecule and the substrate. In this work, we show how the explicit modeling of different characteristics of the bonds in these systems improves the performance of machine learning methods for optimization. Furthermore, we introduce an anisotropic kernel in the Gaussian process regression framework that guides the search for the local minimum, and we show its overall good performance across different types of atomic systems. The method shows a speed-up of up to a factor of two compared with the fastest standard optimization methods on adsorption systems. Additionally, we show that a limited memory approach is not only beneficial in terms of overall computational resources but can also result in a further reduction of energy and force calculations.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2018

A non-intrusive parallel-in-time approach for simultaneous optimization with unsteady PDEs

This paper presents a non-intrusive framework for integrating existing unsteady partial differential equation (PDE) solvers into a parallel-in-time simultaneous optimization algorithm. The time-parallelization is provided by the non-intrusive software library XBraid [Parallel multigrid in time, software available at http://llnl.gov/casc/xbraid], which applies an iterative multigrid reduction technique to the time domain of existing time-marching schemes for solving unsteady PDEs. Its general user-interface has been extended in [S. Günther, N.R. Gauger, and J.B. Schroder, A non-intrusive parallel-in-time adjoint solver with the XBraid library, Comput. Vis. Sci. 19 (2018), pp. 85–95. Available at arXiv, math.OC/1705.00663] for computing adjoint sensitivities such that gradients of output quantities with respect to design changes can be computed parallel-in-time alongside with the primal PDE solution. In this paper, the primal and adjoint XBraid iterations are embedded into a simultaneous optimization framework, namely the One-shot method. In this method, design updates towards optimality are employed after each state and adjoint update such that optimality and feasibility of the design and the PDE solution are reached simultaneously. Finally, the time-parallel optimization method is validated on an advection-dominated flow control problem which shows significant speedup over a classical time-serial optimization algorithm.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2020

Numerical Modeling of Anisotropic Elastic-Wave Sensitivity Propagation for Optimal Design of Time-Lapse Seismic Surveys

Reliable subsurface time-lapse seismic monitoring is crucial for many geophysical applications, such as enhanced geothermal system characterization, geologic carbon utilization and storage, and conventional and unconventional oil/gas reservoir characterization, etc. In this work, we develop an elastic-wave sensitivity propagation method for optimal design of cost-effective time-lapse seismic surveys considering the fact that most of subsurface geologic layers and fractured reservoirs are anisotropic instead of isotropic. For anisotropic media, we define monitoring criteria using qP- and qS-wave sensitivity energies after decomposing qP- and qS-wave components from the total elastic-wave sensitivity wavefield using a hybrid time- and frequency-domain approach. Geophones should therefore be placed at locations with significant qP- and qS-wave sensitivity energies for cost-effective time-lapse seismic monitoring in an anisotropic geology setting. Our numerical modeling results for a modified anisotropic Hess model demonstrate that, compared with the isotropic case, subsurface anisotropy changes the spatial distributions of elastic-wave sensitivity energies. Consequently, it is necessary to consider subsurface anisotropies when designing the spatial distribution of geophones for cost-effective time-lapse seismic monitoring. This finding suggests that it is essential to use our new anisotropic elastic-wave sensitivity modeling method for optimal design of time-lapse seismic surveys to reliably monitor the changes in subsurface reservoirs, fracture zones or target monitoring regions.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2015

Relative entropy and optimization-driven coarse-graining methods in VOTCA

We discuss recent advances of the VOTCA package for systematic coarse-graining. Two methods have been implemented, namely the downhill simplex optimization and the relative entropy minimization. We illustrate the new methods by coarse-graining SPC/E bulk water and more complex water-methanol mixture systems. The CG potentials obtained from both methods are then evaluated by comparing the pair distributions from the coarse-grained to the reference atomistic simulations.We have also added a parallel analysis framework to improve the computational efficiency of the coarse-graining process.

74 ATOMIC AND MOLECULAR PHYSICS↗

DOE OSTI2022

System and method for reasoning about the optimality of a configuration parameter of a distributed system

Embodiments provide a system and method for reasoning about the optimality of a configuration parameter of a distributed system. During operation, the system obtains a multi-layer graph for a system with a plurality of components, wherein the multi-layer graph comprises a configuration subgraph, a vulnerability subgraph, and a dependency subgraph. The system determines, based on the multi-layer graph, constraint relationships associated with configuration parameters for the components, wherein the constraint relationships include security constraints and functionality constraints. The system computes an unsatisfiable core which comprises a set of mutually incompatible constraints. The system resolves, based on a strategy and over multiple iterations, the unsatisfiable core by analyzing one pair of mutually incompatible constraints per a respective iteration, to obtain a new unsatisfiable core which comprises a smaller number of mutually incompatible constraints than the computed unsatisfiable core or a previously computed unsatisfiable core from a most recent iteration.

Soroush, Hamed↗

DOE OSTI2025

Machine learning for reparameterization of multi-scale closures

Scientific machine learning (ML) is becoming increasingly useful in learning closure models for multi-scale physics problems; however, many ML approaches require a vast array of training data and can struggle with generalization and interpretability. Here, rather than learning an entire closure operator, we adopt an existing reduced-dimension model of the microphysics and learn an optimal re-parameterization of the solver. We demonstrate two approaches for training the reduced dimension closure model (1) an a priori method that optimizes the closure parameterization and the neural network parameters separately and (2) an a posteriori method that simultaneously optimizes both. Using the simulation of biomass pyrolysis as a motivating example, we show that the a posteriori method achieves better target losses and is less dependent on training dataset size for generalizability. We then demonstrate the impact that implementing this reparameterization has at the macroscale, showing improved predictive performance with no modification to the underlying macroscale solvers.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2021

A scalable algorithm for the optimization of neural network architectures

In this work, we propose a new scalable method to optimize the architecture of an artificial neural network. The proposed algorithm, called Greedy Search for Neural Network Architecture, aims to determine a neural network with minimal number of layers that is at least as performant as neural networks of the same structure identified by other hyperparameter search algorithms in terms of accuracy and computational cost. Numerical results performed on benchmark datasets show that, for these datasets, our method outperforms state-of-the-art hyperparameter optimization algorithms in terms of attainable predictive performance by the selected neural network architecture, and time-to-solution for the hyperparameter optimization to complete.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2016

Optimization of viral resuspension methods for carbon-rich soils along a permafrost thaw gradient

Permafrost stores approximately 50% of global soil carbon (C) in a frozen form; it is thawing rapidly under climate change, and little is known about viral communities in these soils or their roles in C cycling. In permafrost soils, microorganisms contribute significantly to C cycling, and characterizing them has recently been shown to improve prediction of ecosystem function. In other ecosystems, viruses have broad ecosystem and community impacts ranging from host cell mortality and organic matter cycling to horizontal gene transfer and reprogramming of core microbial metabolisms. Here we developed an optimized protocol to extract viruses from three types of high organic-matter peatland soils across a permafrost thaw gradient (palsa, moss-dominated bog, and sedge-dominated fen). Three separate experiments were used to evaluate the impact of chemical buffers, physical dispersion, storage conditions, and concentration and purification methods on viral yields. The most successful protocol, amended potassium citrate buffer with bead-beating or vortexing and BSA, yielded on average as much as 2-fold more virus-like particles (VLPs) g –1 of soil than other methods tested. All method combinations yielded VLPs g –1 of soil on the 10 8 order of magnitude across all three soil types. The different storage and concentration methods did not yield significantly more VLPs g –1 of soil among the soil types. In conclusion, this research provides much-needed guidelines for resuspending viruses from soils, specifically carbon-rich soils, paving the way for incorporating viruses into soil ecology studies.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2018

Optimal Operation of a Plug-In Hybrid Vehicle

In this work, we present a convex optimization control method that has been shown in simulations to increase the fuel efficiency of a plug-in hybrid electric vehicle by over 10%. Using information on energy demand and energy use profiles, the problem is defined to preferentially use battery resources sourced from the grid over petroleum resources. We pose the general nonlinear optimal resource management problem over a predetermined route as a convex optimization problem using a reduced model of the vehicle. This problem is computationally efficient enough to be optimized “on the fly” on the on-board vehicle computer and is thus able to adapt to changing vehicle conditions in real time. Lastly, using this reduced model to generate control inputs for the detailed vehicle simulator autonomie, we record efficiency gains of over 10% as compared to the industry standard charge depleting charge sustaining controller over synthetic mixed urban-suburban routes.

02 PETROLEUM↗

DOE OSTI2015

Bi-directional evolutionary optimization for photonic band gap structures

Toward an efficient and easy-implement optimization for photonic band gap structures, this paper extends the bi-directional evolutionary structural optimization (BESO) method for maximizing photonic band gaps. Photonic crystals are assumed to be periodically composed of two dielectric materials with the different permittivity. Based on the finite element analysis and sensitivity analysis, BESO starts from a simple initial design without any band gap and gradually re-distributes dielectric materials within the unit cell so that the resulting photonic crystal possesses a maximum band gap between two specified adjacent bands. Numerical examples demonstrated the proposed optimization algorithm can successfully obtain the band gaps from the first to the tenth band for both transverse magnetic and electric polarizations. Some optimized photonic crystals exhibit novel patterns markedly different from traditional designs of photonic crystals.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

DOE OSTI2017

Homogenizing Advanced Alloys: Thermodynamic and Kinetic Simulations Followed by Experimental Results

Segregation of solute elements occurs in nearly all metal alloys during solidification. The resultant elemental partitioning can severely degrade as-cast material properties and lead to difficulties during post-processing (e.g., hot shorts and incipient melting). Many cast articles are subjected to a homogenization heat treatment in order to minimize segregation and improve their performance. Traditionally, homogenization heat treatments are based upon past practice or time-consuming trial and error experiments. Through the use of thermodynamic and kinetic modeling software, NETL has designed a systematic method to optimize homogenization heat treatments. Use of the method allows engineers and researchers to homogenize casting chemistries to levels appropriate for a given application. The method also allows for the adjustment of heat treatment schedules to fit limitations on in-house equipment (capability, reliability, etc.) while maintaining clear numeric targets for segregation reduction. In this approach, the Scheil module within Thermo-Calc is used to predict the as-cast segregation present within an alloy, and then diffusion controlled transformations is used to model homogenization kinetics as a function of time and temperature. Examples of computationally designed heat treatments and verification of their effects on segregation and properties of real castings are presented.

36 MATERIALS SCIENCE↗

DOE OSTI2018

Risk-Informed Systems Analysis (RISA) Dynamic Fire PRA Roadmap

Modeling and implementing fire safety for nuclear power plants is a costly activity. Because of the complexity of fire phenomenon and multiple operational procedures, it is difficult to computationally provide assurance that the mitigation methods are adequate for critical areas using current analysis methods. An economical method to provide more accurate modeling and optimize mitigation methods is needed to improve nuclear power viability. This report describes the initial investigation into modeling and simulation tools for application of fire as part of the Risk-Informed Systems Analysis (RISA), formerly Risk-Informed Safety Margin Characterization (RISMC). The report provides a framework of how 3D modeling and simulation techniques could be combined with a dynamic Probabilistic Risk Analysis (PRA) to reduce compounding conservatism present in current Fire PRA methods. Electrical Power Research Institute has analyzed current Fire PRA practices and identified the most significant contributors to risk and areas for improving analysis. This framework describes how to apply dynamic PRA and simulation methods for key contributors/scenarios, credit missing factors of manual fire suppression, and applying conditional probabilities.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

DOE OSTI2019

Industry Fire Modeling Enhancement Tools and Methods. Light Water Reactor Sustainability Program report

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

DOE OSTI2022

Assessment of Bacterial Inoculant Delivery Methods for Cereal Crops

Despite growing evidence that plant growth-promoting bacteria can be used to improve crop vigor, a comparison of the different methods of delivery to determine which is optimal has not been published. An optimal inoculation method ensures that the inoculant colonizes the host plant so that its potential for plant growth-promotion is fully evaluated. The objective of this study was to compare the efficacy of three seed coating methods, seedling priming, and soil drench for delivering three bacterial inoculants to the sorghum rhizosphere and root endosphere. The methods were compared across multiple time points under axenic conditions and colonization efficiency was determined by quantitative polymerase chain reaction (qPCR). Two seed coating methods were also assessed in the field to test the reproducibility of the greenhouse results under non-sterile conditions. In the greenhouse seed coating methods were more successful in delivering the Gram-positive inoculant (Terrabacter sp.) while better colonization from the Gram-negative bacteria (Chitinophaga pinensis and Caulobacter rhizosphaerae) was observed with seedling priming and soil drench. This suggested that Gram-positive bacteria may be more suitable for the seed coating methods possibly because of their thick peptidoglycan cell wall. We also demonstrated that prolonged seed coating for 12 h could effectively enhance the colonization of C. pinensis, an endophytic bacterium, but not the rhizosphere colonizing C. rhizosphaerae. In the field only a small amount of inoculant was detected in the rhizosphere. This comparison demonstrates the importance of using the appropriate inoculation method for testing different types of bacteria for their plant growth-promotion potential.

Terrabacter↗

DOE OSTI2018

On-line optimization scheme for HVAC demand response

A computer-implemented method of optimizing demand-response (DR) of a heating, ventilation, and air-conditioning (HVAC) system of a building, includes determining (30, 31, 32) a value of an objective function F.sub.ij of a HVAC system for each of a plurality of DR strategies j for each of a plurality of weather patterns i that is a weighted sum of an energy cost of the HVAC system and a thermal comfort loss of the HVAC system, assigning (33, 34, 35, 36) a likelihood score L.sub.i,j to each of a selected subset of near-optimal DR strategies j for each weather pattern i, and selecting (37, 38) those near-optimal DR strategies with large overall likelihood scores L.sub.j to create an optimal strategy pool of DR strategies. An optimal strategy pool can be searched (39) in real-time for an optimal DR strategy for a given weather pattern.

42 ENGINEERING↗

DOE OSTI2019

Optimized sub-sampling in an electron microscope

Disclosed are methods for optimized sub-sampling in an electron microscope. With regard at least to utilization of electron dose budgets, of time for acquisition of measurements, and of computing/processing capabilities, very high efficiencies can be achieved by informing and/or adapting subsequent sub-sampling measurements according to one or more earlier-acquired sparse datasets and/or according to analyzes thereof.

Stevens, Andrew J.↗

DOE OSTI2020

Fire Risk Investigation in 3D (FRI3D) Software and Process for Integrated Fire Modeling

Modeling and implementing fire safety for nuclear power plants is a costly activity. Because of the complexity of fire phenomena and multiple operational procedures, it is difficult to computationally provide assurance that mitigation methods are adequate for critical areas using current analysis methods in a cost-effective manner. The nuclear industry needs efficient methods to provide more accurate modeling and optimize mitigation methods to improve nuclear power plant understanding for fire scenarios. This report describes the work done over the last two year on the Fire Risk Investigation in 3D (FRI3D) software. This software simplifies the modeling process by importing existing plant models and data, incorporating a 3D modeling environment and coupling with the fire simulation software CFAST. This eliminates the manual labor and errors associated with much of the fire modeling process. The report lays out the status and path of FRID software for the Risk Informed Safety Analysis pathway of the Light Water Reactor Sustainability project at Idaho National Laboratory and industry collaborators to best help reduce costs and improve realism in fire probabilistic risk analysis.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2016

Poster - 19: Investigation of Electron Reference Dosimetry Based on Optimal Chamber Shift

An addendum/revision to AAPM TG-51 electron reference dosimetry is highly expected to meet the clinical requirement with the increasing usage of new ion chambers not covered in TG-51. A recent study, Med. Phys. 41, 111701, proposed a new fitting equation for the beam quality conversion factor k’{sub Q} to a wide spectrum of chambers. In the study, an optimal Effective Point of Measurement (EPOM) from Monte Carlo calculations was recommended and the fitting parameters to k’{sub Q} was based on it. We investigated the absolute dose obtained based on the optimal EPOM method and the original TG-51 method with k’{sub R50} determined differently. The results showed that using the Markus curve is a better choice than the well-guarded chamber fitting for an IBA PPC-05 parallel plate chamber if we need to strictly follow the AAPM TG-51 protocol. We also examined the usage of the new fitting equation with measurement performed at the physical EPOM, instead of the optimal EPOM. The former is more readily determined and more practical in clinics. Our study indicated that the k’{sub Q} fitting based on the optimal EPOM can be used to measurement at the physical EPOM with no significant clinical impact. The inclusion of Farmer chamber gradient correction P{sub gr} in k’{sub Q}, as in the mentioned study, asks for the precise positioning of chamber center at dref. It is not recommended in clinics to avoid over-correction for low electron energies, especially for an institute having matching Linacs implemented.

60 APPLIED LIFE SCIENCES↗