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At least 883 records · Page 49

From Nonclassical to Classical: Crystallization Seeds Reshape Nucleation Mechanisms

Crystalline seeds are widely employed in crystallization to accelerate nucleation and control product polymorphs; yet, their impact on nucleation mechanisms remains poorly understood. While homogeneous nucleation of crystals from solution often proceeds through nonclassical pathways involving amorphous intermediates, it is unclear how seeds that promote heterogeneous nucleation reshape these mechanisms and govern polymorph selection. Here, in this study, we provide the first direct evidence that crystalline seeds can bypass the need for amorphous intermediates as nucleation sites, converting nonclassical nucleation mechanisms into classical, monomer-by-monomer crystallization pathways. Using molecular dynamics simulations of zeolite synthesis, we uncover a complex reaction network of competing nucleation processes mediated by intermediate interfacial polymorphs. The interplay between thermodynamic stability and kinetic favorability of these interfacial polymorphs dictates nucleation outcomes, creating a dynamic balance between the interfacial polymorph stability and crystallization rates. Furthermore, we show that the synthesis environment-whether monomers or aggregates serve as reactants-profoundly impacts these pathways. At moderate supersaturation, seeds eliminate amorphous intermediates and promote classical nucleation, whereas high supersaturation or aggregate-based reactants favor nonclassical pathways, even in the presence of seeds. These findings establish a general framework for understanding how seeds govern crystallization mechanisms, with broad implications for controlling nucleation kinetics, polymorph selection, and material properties. While focused on zeolites, this work reveals insights that may be applicable to biominerals, pharmaceuticals, functional materials, and catalysts, providing a basis for engineering crystallization pathways in diverse applications.

Chu-Jon, Carlos [Univ. of Utah, Salt Lake City, UT↗

Negative linear compressibility and complex phase behaviour in 7 Li 2 CO 3

We present a combination of neutron powder-diffraction measurements demonstrating negative linear compressibility and irregular thermal expansion in 7 Li 2 CO 3 . This is shown to be due to an interplay between the tilting of the rigid carbonate group and the shear strain in the unit cell, which leads to a first-order transition from monoclinic to hexagonal symmetry. The phase evolution is shown to be highly sensitive to the level of hydrostaticity in the sample. Under hydrostatic conditions, the sample begins transformation at 8.5 GPa leading to a change from tetrahedral to octahedral Li coordination. Symmetry adapted basis mode analysis, combined with density functional theoretical (DFT) calculations and Raman spectroscopy, is used to show that this transition is reverse proper ferroelastic in nature.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Fast transformations between configuration state function and Slater determinant bases for direct configuration interaction

A hybrid configuration state function (CSF) and Slater determinant (SD) basis full configuration interaction (CI) program was developed to simultaneously take advantage of fast SD basis algorithms for σ = Hc formation and the smaller CI vector length and more robust convergence offered by a CSF basis. Graphical processing unit acceleration of the direct CSF-SD and SD-CSF basis transformation algorithms ensures that the combined transformation time per iteration relative to σ formation is small (~15%). In addition to the obvious benefits of reducing the memory footprint of the CI vector, additional computational savings are demonstrated that rely directly on the size of the CI basis, in one particular case reducing the CI time-to-solution of a HF-CAS-(16,16)-CI/6-31G calculation of ethylene from 1954.79 s to 956 s by using a CSF basis, a 2.0× speedup.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Infrared spectroscopy of RG–Co + (H 2 O) complexes (RG = Ar, Ne, He): The role of rare gas “tag” atoms

RG n –Co + (H 2 O) cation complexes (RG = Ar, Ne, He) are generated in a supersonic expansion by pulsed laser vaporization. Here, complexes are mass-selected using a time-of-flight spectrometer and studied with infrared laser photodissociation spectroscopy, measuring the respective mass channels corresponding to the elimination of the rare gas “tag” atom. Spectral patterns and theory indicate that the structures of the ions with a single rare gas atom have this bound to the cobalt cation opposite the water moiety in a near-C 2v arrangement. The O–H stretch vibrations of the complex are shifted compared to those of water because of the metal cation charge-transfer interaction; these frequencies also vary systematically with the rare gas atom attached. The efficiencies of photodissociation also vary with the rare gas atoms because of their widely different binding energies to the cobalt cation. The spectrum of the argon complex could only be measured when at least three argon atoms were attached. In the case of the helium complex, the low binding energy allows the spectra to be measured for the low-frequency H–O–H scissors bending mode and for the O–D stretches of the deuterated analog. The partially resolved rotational structure for the antisymmetric O–H and O–D stretches reveals the temperature of these complexes (6 K) and establishes the electronic ground state. The helium complex has the same 3 B 1 ground state as the tag-free complex studied previously by Metz and co-workers (2013), but the A rotational constant is contaminated by vibrational averaging from the bending motion of the helium.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Codiscovering graphical structure and functional relationships within data: A Gaussian Process framework for connecting the dots

Most problems within and beyond the scientific domain can be framed into one of the following three levels of complexity of function approximation. Type 1: Approximate an unknown function given input/output data. Type 2: Consider a collection of variables and functions, some of which are unknown, indexed by the nodes and hyperedges of a hypergraph (a generalized graph where edges can connect more than two vertices). Given partial observations of the variables of the hypergraph (satisfying the functional dependencies imposed by its structure), approximate all the unobserved variables and unknown functions. Type 3: Expanding on Type 2, if the hypergraph structure itself is unknown, use partial observations of the variables of the hypergraph to discover its structure and approximate its unknown functions. These hypergraphs offer a natural platform for organizing, communicating, and processing computational knowledge. While most scientific problems can be framed as the data-driven discovery of unknown functions in a computational hypergraph whose structure is known (Type 2), many require the data-driven discovery of the structure (connectivity) of the hypergraph itself (Type 3). We introduce an interpretable Gaussian Process (GP) framework for such (Type 3) problems that does not require randomization of the data, access to or control over its sampling, or sparsity of the unknown functions in a known or learned basis. Its polynomial complexity, which contrasts sharply with the super-exponential complexity of causal inference methods, is enabled by the nonlinear ANOVA capabilities of GPs used as a sensing mechanism.

Science & Technology - Other Topics↗

Thermodynamics of calcium binding to heparin: Implications of solvation and water structuring for polysaccharide biofunctions

Heparan sulfates are found in all animal tissues and have essential roles in living systems. This family of biomacromolecules modulates binding to calcium ions (Ca 2+ ) in low free energy reactions that influence biochemical processes from cell signaling and anticoagulant efficacy to biomineralization. Despite their ubiquity, the thermodynamic basis for how heparans and similarly functionalized biomolecules regulate Ca 2+ interactions is not yet established. Using heparosan (Control) and heparins with different positions of sulfate groups, we quantify how SO 3 − and COO − content and SO 3 − position modulate Ca 2+ binding by isothermal titration calorimetry. The free energy of all heparin-Ca2+ interactions (ΔG rxn ) is dominated by entropic contributions due to favorable water release from polar, hydrophilic groups. Heparin with both sulfate esters (O-SO 3 − ) and sulfamides (N-SO 3 − ) has the strongest binding to Ca 2+ compared to heparosan and to heparin with only O-SO 3 − groups (~3X). By linking Ca 2+ binding thermodynamics to measurements of the interfacial energy for calcite (CaCO 3 ) crystallization onto polysaccharides, we show molecule-specific differences in nucleation rate can be explained by differences in water structuring during Ca 2+ interactions. A large entropic term (-TΔS rxn ) upon Ca 2+ –polysaccharide binding correlates with high interfacial energy to CaCO 3 nucleation. Combining our measurements with literature values indicates many Ca 2+ –polysaccharide interactions have a shared thermodynamic signature. The resulting enthalpy–entropy compensation relationship suggests these interactions are generally dominated by water restructuring involving few conformational changes, distinct from Ca 2+ –protein binding. Our findings quantify the thermodynamic origins of heparin-specific interactions with Ca 2+ and demonstrate the contributions of solvation and functional group position during biomacromolecule-mediated ion regulation.

15 GEOTHERMAL ENERGY↗

Partial wrapping of single-stranded DNA by replication protein A and modulation through phosphorylation

Abstract Single-stranded DNA (ssDNA) intermediates which emerge during DNA metabolic processes are shielded by replication protein A (RPA). RPA binds to ssDNA and acts as a gatekeeper to direct the ssDNA towards downstream DNA metabolic pathways with exceptional specificity. Understanding the mechanistic basis for such RPA-dependent functional specificity requires knowledge of the structural conformation of ssDNA when RPA-bound. Previous studies suggested a stretching of ssDNA by RPA. However, structural investigations uncovered a partial wrapping of ssDNA around RPA. Therefore, to reconcile the models, in this study, we measured the end-to-end distances of free ssDNA and RPA–ssDNA complexes using single-molecule FRET and double electron–electron resonance (DEER) spectroscopy and found only a small systematic increase in the end-to-end distance of ssDNA upon RPA binding. This change does not align with a linear stretching model but rather supports partial wrapping of ssDNA around the contour of DNA binding domains of RPA. Furthermore, we reveal how phosphorylation at the key Ser-384 site in the RPA70 subunit provides access to the wrapped ssDNA by remodeling the DNA-binding domains. These findings establish a precise structural model for RPA-bound ssDNA, providing valuable insights into how RPA facilitates the remodeling of ssDNA for subsequent downstream processes.

Biochemistry & Molecular Biology↗

Parton distribution functions of heavy mesons on the light front

The parton distribution functions (PDFs) of heavy mesons are evaluated from their light-front wave functions, which are obtained from a basis light-front quantization in the leading Fock sector representation. We consider the mass eigenstates from an effective Hamiltonian consisting of the confining potential adopted from light-front holography in the transverse direction, a longitudinal confinement, and a one-gluon exchange interaction with running coupling. In this work we present the gluon and the sea quark PDFs which we generate dynamically from the QCD evolution of the valence quark distributions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Using density functional theory to construct multiphase equations of state: tin as an example

We present a general methodology for using density functional theory (DFT) calculations as a basis for constructing multiphase equations of state (EOS). Focusing on tin as an example, we discuss the full process of generating a tabular EOS, starting from first-principles calculations and arriving at a full EOS in agreement with existing experimental data. We begin by describing DFT calculations for the five solid phases and liquid phase of tin, including cold curve, phonon, and DFT-based molecular dynamics calculations. We then discuss methods for incorporating DFT results into materials models used in OpenSesame, the program used to create a full tabular multiphase EOS. Next, we outline a general strategy for adjusting model parameters in OpenSesame to fit to a variety of experimental data, including isobaric data, isothermal data, shock data, solid-solid phase boundary measurements, and measurements of the melt curve. We end with a discussion of the advantages of using DFT data as a foundation for EOS generation and discuss potential strategies for automated EOS generation based on the fitting process highlighted in this work.

74 ATOMIC AND MOLECULAR PHYSICS↗

Blockchain for Fault-Tolerant Grid Operations

Radial topology and vast geographic coverage make distribution systems prone to widespread power outages upon the failure of a single (or multiple) upstream component. Fault-handling algorithms depend heavily on correct estimations of the system’s state to effectively isolate the affected area and reduce the number of affected customers while maintaining operational safety. The work described here leverages the core features of distributed, consensus-based decision-making processes and the immutability of blockchain, and demonstrates their value in improving fault-tolerant grid operations. In this work, blockchain was used to create a trusted data-sharing platform that enables independent actors to reconstruct the system state; this enables distributed resources to make intelligent decisions with limited knowledge. Although the process requires data sharing, its algorithms have been designed to limit the amount of private information that is exchanged, which helps preserve business-sensitive data and maintain customer privacy. In addition, by reducing the information that must be shared, the communication requirements are also reduced; (however, an in-depth analysis of the communication requirements is beyond the scope of this project). The proposed use cases are intended to represent a foundational basis for third parties to develop functional solutions that can eventually be deployed in the field. To further provide guidance, the envisioned use cases have incorporated design requirements that consider the blockchain characteristics and a need to limit information from surrounding resources, which preserve the assumption and the possibility that such resources could belong to different entities. This report presents a detailed design of the three use cases with the tools needed to enable the analysis being tested. The implemented gross error detection method can detect mismatches when the error exceeds 3.8 times the sensor’s rated accuracy. Detection of the circuit breaker state successfully identified the correct states across all simulation tests. A distribution-system power-flow solution in the simulator OpenDSS generally possesses a convergency tolerance of 0.01% on the voltage magnitude. The evaluation of possible reconnection using voltage magnitude—preserving the data ownership—has a voltage magnitude difference smaller than 0.001% from the OpenDSS result. The results preserving data ownership have a difference within the expected power flow tolerance with full knowledge of the system, which surpasses expectations.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Simulating and Optimizing Quantum State Transport

The goal of this project was to produce an accurate simulator of the “pitch and catch” process of sending quantum states between SRF cavities, and to find a method for optimizing the control pumps. We developed a program in C++ to integrate the equations of motion with high speed and precision, and used this as a basis for finding an optimal control function to maximize the state transfer efficiency. To demonstrate this we have shown an example of an optimal drive function and the resulting system dynamics, as well as a heat map of the cost function for a range of drive amplitudes.

Weston, Jacob↗

MARVEL Hazard Evaluation ECAR-6440

MARVEL Hazards Evaluation evaluated the impacts of MARVEL operations, hazards, and postulated accidents. The hazard evaluation of MARVEL events and associated operations was performed for selection and evaluation of safety classification of systems, structures, and components (SSCs) and SSC safety functions, and for selection of design basis accidents (DBAs) applicable to the MARVEL microreactor design.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Electromagnetic containerless processing requirements and recommended facility concept and capabilities for space lab

Containerless melting, reaction, and solidification experiments and processes which potentially can lead to new understanding of material science and production of new or improved materials in the weightless space environment are reviewed in terms of planning for spacelab. Most of the experiments and processes discussed are amenable to the employment of electromagnetic position control and electromagnetic induction or electron beam heating and melting. The spectrum of relevant properties of materials, which determine requirements for a space laboratory electromagnetic containerless processing facility are reviewed. Appropriate distributions and associated coil structures are analyzed and compared on the basis of efficiency, for providing the functions of position sensing, control, and induction heating. Several coil systems are found capable of providing these functions. Exchangeable modular coils in appropriate sizes are recommended to achieve the maximum power efficiencies, for a wide range of specimen sizes and resistivities, in order to conserve total facility power.

Frost, R. T.↗

Civil aircraft

This study deals with aircraft material and structural requirements, advantages of composites, airframe and engine applications, design procedures, problem areas, and future trends in civil aircraft. The selection of materials and design of structure for any given component or part must be made not only on the basis of the mechanical and structural functions, but must also consider the operational and cost parameters for civil aircraft. Composites have caused the orientation to shift from a metal-based philosophy for design, where only incremental improvements could be anticipated, to one where substantial changes in design approaches are possible. Future designs are likely to include a combination of new approaches and composite materials.

Mayer, N. J.↗

Photoabsorption in formaldehyde

Theoretical studies of the vertical electronic dipole excitation and ionization spectra in molecular formaldehyde are reported. The investigations relied on configuration-interaction calculations and moment-theory techniques. A double-zeta basis of contracted Gaussian-lobe functions supplemented with appropriate polarization and bond functions was used to construct Fock spectra in C(2 nu) symmetry for certain states near the ground state equilibrium geometry. The ionization energies, discrete vertical transition frequencies, and oscillator strengths for occupied and vertical Fock orbitals are in general accord with experimental determinations and other theoretical calculations. Stieltjes and Chebyshev vertical electronic photoionization profiles were calculated and found to be in good agreement with appropriately averaged photoionization-mass spectrometric measurements of the cross section for parent H2CO(+) ion production.

Langhoff, P. W.↗

Dynamics and certain mechanisms in the changes of the skeletal-muscular system of man under bedrest conditions

Bed rest conditions evaluated varied in the longitudinal axis of the body, perpendicular to the vector gravitational forces, and the cranial portion of the body inclined from the horizontal. The duration of bed rest fluctuated in various experiments from 30 to 182 days. The state of muscle and neuromuscular system was judged on the basis of the recording of various functional indices, as well as by certain results of morphological and biochemical studies and data from the study of motor functions.

Oganov, V. G.↗

Characterization of oriented cracks with differential strain analysis

Linear strain of a rock sample as a function of hydrostatic pressure can be measured with a precision of 2 millionths. Such high-precision data for three orthogonal directions allow calculation of the distribution function for the porosity due to cracks' closing completely at a given pressure. Such data for at least six independent directions yield the zero-pressure strain tensor due to cracks' closing completely at a given pressure. The principal values and axes of this tensor distribution function provide information about the orientation of cracks as a function of closure pressure. The mathematical basis for the technique is developed, and the technique is illustrated with differential strain data for two samples, the Westerly (Rhode Island) granite and the Twin Sisters (Washington) dunite. Strain-tensor calculations reveal that each of these samples has a different type of anisotropic crack distribution.

Siegfried, R.↗

Advanced panel-type influence coefficient methods applied to unsteady three dimensional potential flows

A panel method for solving unsteady, subsonic wind-body-tail flow problems is formulated and partially verified. The method is applicable to general aircraft configurations consisting of arbitrary arrangements of wings, bodies, tails, and nacelles. The wake may be located arbitrarily and the unsteady, transverse component of vorticity in the wake may be assigned any covection velocity. The wake in the unsteady flow problem, therefore, can be given the location and convection velocity of the wake produced by a steady flow which is the mean flow of the unsteady flow problem. The panel method has been used as a basis for expanding the unsteady kernel function in a power series to obtain panel influence coefficients which can be integrated in closed form.

Dusto, A. R.↗