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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 883 records · Page 49
All sourcesNASA NTRSDOE OSTI
DOE OSTI2020

A tyrosine phosphoregulatory system controls exopolysaccharide biosynthesis and biofilm formation in Vibrio cholerae

Production of an extracellular matrix is essential for biofilm formation, as this matrix both secures and protects the cells it encases. Mechanisms underlying production and assembly of matrices are poorly understood. Vibrio cholerae, relies heavily on biofilm formation for survival, infectivity, and transmission. Biofilm formation requires Vibrio polysaccharide (VPS), which is produced by vps gene-products, yet the function of these products remains unknown. Here, we demonstrate that the vps gene-products vpsO and vpsU encode respectively for a tyrosine kinase and a cognate tyrosine phosphatase. Collectively, VpsO and VpsU act as a tyrosine phosphoregulatory system to modulate VPS production. We present structures of VpsU and the kinase domain of VpsO, and we report observed autocatalytic tyrosine phosphorylation of the VpsO C-terminal tail. The position and amount of tyrosine phosphorylation in the VpsO C-terminal tail represses VPS production and biofilm formation through a mechanism involving the modulation of VpsO oligomerization. We found that tyrosine phosphorylation enhances stability of VpsO. Regulation of VpsO phosphorylation by the phosphatase VpsU is vital for maintaining native VPS levels. This study provides new insights into the mechanism and regulation of VPS production and establishes general principles of biofilm matrix production and its inhibition.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

DEEPEN: Newberry Volcano MT and Gravity Data - 2022 and 2023 Acquisition and Processing

As part of DEEPEN (DE-risking Exploration of geothermal Plays in magmatic ENvironments), a 3D play fairway analysis (PFA) was conducted at Newberry Volcano in Central Oregon for multiple play types (conventional hydrothermal, superhot EGS, and supercritical). For use in this PFA, combined full tensor broadband magnetotelluric (MT) and gravity data were acquired, processed, and inverted by Enthalpion Energy LLC (Enthalpion) with support from NREL staff. The data collection efforts took place from June 19th to July 24. Data were collected with the goal of gaining an improved understanding of the South Flank and the extent of the magma chamber. This GDR submission includes the raw data, single inversions, joint inversions, resolution matrices, and a report on these processes. More detailed information about the folder structure of the datasets included in this submission may be found on pages 94-97 of Magnetotelluric and Gravity Survey Report.pdf below.

15 GEOTHERMAL ENERGY↗
DOE OSTI2023

Investigation into Na and Cs activity coefficients in high salt solutions to support Cs removal in Hanford tank waste

The treatment of Hanford tank waste is one of the most technically challenging environmental cleanup activities for the U.S. Department of Energy to date. To expedite the processing of liquid waste stored in underground tanks in southeastern Washington state, it is necessary to remove the significant dose contributor, 137 Cs. Toward this effort, ion exchange with crystalline silicotitanate (CST) has been employed as part of the Tank Side Cesium Removal system. The model used to predict Cs exchange onto CST was developed using activity coefficients calculated from the Bromley equation. A series of batch contact tests that varied in [Na] were conducted to look at the impact of Na concentration on Cs distribution. Experimental distribution ratios ( K d ) were compared to the distribution ratios predicted using three different activity coefficient models: (1) commercially available HSC software, (2) the Bromley equation, and (3) a simplified approach adapted from Marcos-Arroyo et al. Ultimately, the Bromley method underpredicted the effect of ionic strength on the Na activity coefficient ( γ Na+ ), HSC overestimated the impact of ionic strength on the expected performance due to the Cs activity coefficient ( γ Cs+ ), but the simplified approach predicted the experimental K d values quite well in a binary matrix. In conclusion, expansion of this approach in complex matrices is necessary for application to Hanford tank waste.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗
DOE OSTI2021

Structural mechanism for modulation of functional amyloid and biofilm formation by Staphylococcal Bap protein switch

The Staphylococcal Bap proteins sense environmental signals (such as pH, [Ca 2+ ]) to build amyloid scaffold biofilm matrices via unknown mechanisms. We here report the crystal structure of the aggregation-prone region of Staphylococcus aureus Bap which adopts a dumbbell-shaped fold. The middle module (MM) connecting the N-terminal and C-terminal lobes consists of a tandem of novel double-Ca 2+ -binding motifs involved in cooperative interaction networks, which undergoes Ca 2+ -dependent order-disorder conformational switches. The N-terminal lobe is sufficient to mediate amyloid aggregation through liquid-liquid phase separation and maturation, and subsequent biofilm formation under acidic conditions. Such processes are promoted by disordered MM at low [Ca 2+ ] but inhibited by ordered MM stabilized by Ca 2+ binding, with inhibition efficiency depending on structural integrity of the interaction networks. Furthermore, these studies illustrate a novel protein switch in pathogenic bacteria and provide insights into the mechanistic understanding of Bap proteins in modulation of functional amyloid and biofilm formation, which could be implemented in the anti-biofilm drug design.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

NOvA Inclusive Nue CC Cross Section Data Release

NOvA inclusive electron neutrino cross section results presented at Neutrino2020Exposure:8.09E20 protons-on-target, neutrino-enhanced beamData release contains 3 ROOT files containing the double-differential measurement with respect to electron angle (cos theta) and electron energy, a single-differential measurement with respect to squared four-momentum transfer (Q2), and the total cross section as a function of neutrino energy. The 1D cross-section measurements include the same kinematic phase space restrictions present in the double-differential analysis.The files, xsec_{dThdE/Enu/dQ2}.root, contain the extracted cross section and associated covariance matrices for the double-differential cross section with respect to the observed electron kinematics, dThdE, neutrino energy, Enu, and squared four-momentum transfer, Q^2.In each file there will be the following histograms:— TH2D/TH1D xsec: unfolded measured cross section— TH2D xsec_cov: cross section covariance matrix— TH2D stat_cov: statistical covariance matrixIncludes text files, xsec_{dThdE/Enu/dQ2}.txt show the corresponding histograms in plain text format.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2021

Continuous sensor suite measurements of weather, energy, soil and flux at four PumpHouse sites at the East River, Colorado

The purpose of this package is to monitor energy and water fluxes using a comprehensive set of sensors integrated on a tripod set up at 4 locations at the East River watershed in Colorado in the Upper Colorado River Basin as part of the Scientific Focus Area (SFA) research led by the Lawrence Berkeley National Lab (LBNL). This is a continuous sensor suite measurements of weather, energy, soil and flux at four East River pumphouse sites (ER-PHS1, ER-PHS2, ER-PHS3 and ER-PHS4) include: (1) soil CO2 concentration, CO2 flux and heat flux from soil surface; (2) photosynthetic active radiation flux at 1 m; (3) incoming/outcoming short and long wave radiation at 1 m, and user calculated net short and long wave radiation; (4) oxygen concentration and surface infrared temperature; (5) soil volumetric water content, temperature, and electrical conductivity at 10, 30, 60, 115 cm depth 115 cm depth; (6) soil matric potential and temperature at 30 cm depth; (7) incoming short wave radiation at 3 m height; (8) rainfall precipitation; (9) lightning strikes and strike distances; (10) wind direction and speed, maximum wind gust at 3 m; (11) air temperature, vapor pressure and barometric pressure at 3 m; (12) X _axis_level and Y_axis_level_(degree), tilt of the ATMOS 41 sensor; (13) maximum rainfall rate; (14) relative humidity sensor temperature at 3 m; (15) internally calculated vapor pressure deficit at 3 m with vapor pressure, relative humidity and sensor temperature measurements; (16) user calculated vapor pressure.These datasets contain data from Oct 11 2019 to March 20, 2020, and new datasets will be updated on annual basis. Files uploaded in Excel and Word, with copies in csv and pdf format.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Data used in manuscript "Quantifying Subsurface Flow and Solute Transport in a Snowmelt-recharged Hillslope with Multiyear Water Balance", submitted to Water Resources Research on 5-26-2022

Data in this package were used to calculate subsurface flow and solute (specifically dissolved nitrogen) transport in the Pumphouse Lower Montane (PLM) hillslope. These data are included in separate CSV files associated with each figure presented in the manuscript. The files describe site locations and elevations, weather data (air temperatures and precipitation), modeled evapotranspiration, time dependent groundwater elevations, calculated annual subsurface flow, hydraulic conductivity values, time trends in subsurface flow within different zones, pore water concentrations of total dissolve nitrogen (TDN), rates of TDN transport, soil water matric potentials following snowmelt, soil water contents during drainage, and evapotranspiration calculated by soil water mass balance versus by CLM4 model.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Surface elevation, snow depth, vegetation height, and color imagery from multiple UAV surveys from 2018 to 2023 across a watershed near Teller road mile marker 27, Seward Peninsula, Alaska

Multiple photogrammetric surveys using an unoccupied aerial system (UAS) were performed across a watershed along Teller road on the Seward Peninsula (Alaska) to investigate terrain, vegetation and snowpack properties. This work was led by the environmental geophysics team from Lawrence Berkeley National Laboratory as part of the Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic). The multiple photogrammetric surveys used mostly a DJI Matrice 210 UAS with a DJI X5S camera, Ground Control Points (GCPs) surveyed with a Real Time Kinematic (RTK)-GPS, and a structure from motion (SfM) technique for photogrammetric reconstruction. Digital Surface elevation Models (DSMs) were inferred at various times of year, including near peak in plant and leaf density (July 19 2017), close to peak in snow depth (April 1 2019 and April 11 2022), and at low plant and leaf density of tall after the first bare-ground date (June 9 2019). Snow and canopy height were obtained by subtracting DSMs from a Digital Terrain Model (DTM) proxy inferred from the June 9 2019 survey. The derived products include ortho-mosaiced RGB map, DSMs, a DTM proxy, snow depth (April 2019 and 2022) and canopy height (July 2017). Unprocessed and processed data products are included in this package (processing levels 0-2). Data and metadata are provided as text (*.csv), image (*.jpg), and GeoTiff (*.tif) formats. This metadata document contains a description of the survey and processing steps and the inferred products.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic) was a 15-year research effort (2012-2027) to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy’s Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy’s Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

LiDAR Point Cloud Data from the 2018 NGEE Arctic UAS Campaign at the Teller 47 Field Site, Seward Peninsula, Alaska

Airborne remote sensing data collected from Los Alamos National Laboratory’s (LANL) heavy-lift unoccupied aerial system (UAS) hexacopter platform operated by NGEE Arctic scientists from the EES-14 group at Los Alamos National Laboratory. These data were collected in July 2018 at a field site near mile marker 47 along the Teller Road between Nome, Alaska and Teller, Alaska. A DJI Matrice 600 Pro Airframe and Routescene UAV LiDAR System was used to collect LiDAR data. The LiDAR data has undergone basic post-processing using Routescene LidarViewer Pro software to create point cloud data (.laz files). This data package contains point clouds (.laz), processing metadata files (json.lvp), and post-processed kinematic files (.csv). Ancillary aircraft data, flight mission parameters, weather conditions, and lidar data and imagery can be found in NGA281 (https://doi.org/10.5440/1671794).The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Soil Water Potentials (1990-2018) from a calibrated ELM-FATES, and rooting depth analyses scripts, PA-BCI, Panama

This dataset has ELM-FATES simulation outputs and scripts that accompany and reproduce the manuscript, Chitra-Tarak et al. (2021) Hydraulically-vulnerable trees survive on deep-water access during droughts in a tropical forest. New Phytologist. https: //doi.org/10.1111/nph.17464”. This dataset is organized into four parts: (1) source code for the model, Energy Exascale Earth System Land Model-Functionally Assembled Advanced Terrestrial simulator (ELM-FATES) (2) R scripts associated with ELM-FATES simulations: to prepare files for parameter ensemble simulation runs, calibrate the model with observed hydrological fluxes observed at BCI, re-run the model with tuned parameters and obtain long-term soil matric potentials by depth (3) ELM-FATES hydrological simulation outputs at PA-BCI, Panama (1990-2018, daily), and (4) R scripts for inverse rooting depth modeling and post-processing: prepare datasets and inversely model tree rooting depths at BCI, test hypotheses about the relationship of rooting depths with plant hydraulic traits and drought-induced mortality, and reproduce the manuscript itself. n.b. 1. Data needed to run R scripts in (2) and (4) and thus to reproduce the manuscript are sourced from various public datasets. Refer to the data availability section of the accompanying manuscript. 2. This dataset version (prepared on May 12, 2021) matches the revised and published version of the accompanying manuscript (published May 16, 2021) replacing a previous version. In the publication, this dataset is cited as follows: Chitra-Tarak R, Xu C, Aguilar S, Anderson-Teixeira K, Chambers J, Detto M, Faybishenko B, Fisher R, Knox R, Koven C et al. 2020. Soil water potentials (1990–2018) from a calibrated ELM-FATES, and rooting depth analyses scripts, PA-BCI, Panama. 2.0. NGEE Tropics Data Collection. doi: 10.15486/ngt/1696806

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Simulated tree recruitment at PA-BCI under four precipitation scenarios

Simulated recruitment rates are provided for four tropical tree plant functional types (PFTs) which vary in drought and shade tolerance, at Barro Colorado Island, Panama (PA-BCI). Recruitment rates are predicted using the Tree Recruitment Scheme (TRS; Hanbury-Brown et al., 2022) and model data output from the Ecosystem Demography model version 2 with hydrodynamics (ED2; Medvigy et al., 2009, Powell et al., 2018). Predictions of recruitment are provided under four precipitation scenarios: “BASE” = recycled 2008-2014 observed meteorology (Faybishenko & Paton, 2021), “SYN-ENSO” = two exceptionally strong El Niño events within 30 years (Powell et al., 2018), “WET” = 30% increase in precipitation compared to BASE, and DRY-DS = dry season (January–April) precipitation reduced by 75% compared to BASE. In addition to recruitment rates, this dataset provides TRS predictions of PFT-specific seed bank and seedling pool dynamics (tracked in units of carbon) and ED predictions of understory photosynthetically active radiation and soil matric potential at 6 cm soil depth.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Thermomechanical properties of stereolithographic 3D-printed zinc oxide nanocomposites

Stereolithography (SLA) is a highly versatile additive manufacturing technique that utilizes various ink formulations to fabricate 3D-printed nanocomposite structures with desired properties. Zinc oxide (ZnO) is a promising candidate due to its excellent mechanical and thermal stability, and compatibility with various polymeric matrices. Here, in this work, varying ink formulations containing ZnO nanoparticles, along with employing appropriate post-printing curing parameters to fabricate SLA 3D-printed acrylate-based nanocomposites with improved mechanical and thermal properties, were reported. This study can significantly contribute to expanding its potential use in practical applications such as biomedical and structural applications.

36 MATERIALS SCIENCE↗
DOE OSTI2024

Beam correction for multi-pass arcs in FFA@CEBAF: status update

This work examines the multi-pass steering of six electron beams in an FFA arc ranging from approximately 10.5 GeV to 22 GeV. Shown here is an algorithm based on singular value decomposition (SVD) to successfully steer all six beams through the arc given precise knowledge of all beam positions at each of one hundred and one diagnostic locations with one hundred individual corrector magnets: that is successive application of SVD to different 100 × 101 response matrices—one for each beam energy. Further, a machine learning scheme is developed which only requires knowledge of the energy-averaged beam position at each location to provide equivalent steering. Extension of this scheme to other beam optics quantities as well as transverse and longitudinal coupling is explored.

Accelerator Physics↗
DOE OSTI2023

G2Aero: A Python package for separable shape tensors

G2Aero is a Python package for the design and deformation of discrete planar curves and tubular surfaces using a geometric data-driven approach. G2Aero utilizes a topology of product manifolds: the Grassmannian, $\mathcal{G}$($\mathcal{n}$, 2) - the set of 2-dimensional subspaces in $\mathbb{R}$ $\mathcal{n}$ - and the symmetric positive-definite (SPD) manifold, $\mathcal{S}^{2}_{++}$ - the set of 2x2 SPD matrices. The package provides a novel framework for representing separable deformations to shapes, which consist of stretching, scaling, rotating, and translating - also known as affine deformations - and a set of complementary deformations - which we refer to as undulation-type deformations. We focus on airfoil and blade design applications to emphasize the utility of the methods in an environment where the separation of affine and undulation-type deformations is critical. Notable functionalities of the framework for blade design include: 1) generating novel 2D (airfoil) shapes informed by a database of physically relevant airfoils, 2) building 3D blades by interpolating sequences of 2D airfoil cross-sections, and 3) generating blades with consistent perturbations along the blade span. We discuss the framework and provide examples in the context of wind energy applications, specifically wind turbine blade design. Figure 1 shows the wire frame obtained by interpolating airfoils defining the IEA 15-MW wind turbine blade and applying affine transformations corresponding to twist, chordal scaling, and bending. This, and all other figures in the paper, can be reproduced following examples and referencing supporting documentation provided in the G2Aero package.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2026

Alginate–Amorphous Calcium Carbonate Hydrogels for Controlled Therapeutic Release

Alginate hydrogels are widely explored as biocompatible matrices for transdermal delivery of therapeutic compounds but burst release and mechanical stability remain persistent challenges in drug delivery systems. This experimental study investigated alginate–amorphous calcium carbonate (ACC) hydrogel composites designed to regulate release of model anti-inflammatory compound, ibuprofen. Hydrogels containing 1.6–2.0 wt% sodium alginate were crosslinked with CaCl₂ and combined with ACC through two incorporation pathways: (i) separate addition of ACC and ibuprofen or (ii) co-precipitation of ACC onto ibuprofen prior to hydrogel incorporation. Hydrogels without ACC served as Control. Biocomposite structure and properties were characterized and release profiles quantified using Korsmeyer–Peppas (KP) model.Burst release was curbed as crosslinking time increased, highlighting importance of network density in diffusion control. Co-precipitating ACC with ibuprofen prior to incorporating into the hydrogel suppressed burst release and sustained release for > ~72 h. Rheological measurements indicate ACC reinforces hydrogel network, increasing storage modulus while maintaining hydration and flexibility. KP model indicates release is diffusion-controlled, with deviations reflecting contributions from diffusion barriers and morphologic/structural changes near the ACC coated ibuprofen. ACC within alginate hydrogels provides a strategy for tuning drug release while preserving mechanical properties relevant to transdermal applications.

36 MATERIALS SCIENCE↗
DOE OSTI2021

"Spectrally gapped" random walks on networks: a Mean First Passage Time formula

We derive an approximate but explicit formula for the Mean First Passage Time of a random walker between a source and a target node of a directed and weighted network. The formula does not require any matrix inversion, and it takes as only input the transition probabilities into the target node. It is derived from the calculation of the average resolvent of a deformed ensemble of random sub-stochastic matrices H=\langle H\rangle +\delta H H = ⟨ H ⟩ + δ H , with \langle H\rangle ⟨ H ⟩ rank- 1 1 and non-negative. The accuracy of the formula depends on the spectral gap of the reduced transition matrix, and it is tested numerically on several instances of (weighted) networks away from the high sparsity regime, with an excellent agreement.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2024

Density-matrix mean-field theory

Mean-field theories have proven to be efficient tools for exploring diverse phases of matter, complementing alternative methods that are more precise but also more computationally demanding. Conventional mean-field theories often fall short in capturing quantum fluctuations, which restricts their applicability to systems with significant quantum effects. In this article, we propose an improved mean-field theory, density-matrix mean-field theory (DMMFT). DMMFT constructs effective Hamiltonians, incorporating quantum environments shaped by entanglements, quantified by the reduced density matrices. Therefore, it offers a systematic and unbiased approach to account for the effects of fluctuations and entanglements in quantum ordered phases. As demonstrative examples, we show that DMMFT can not only quantitatively evaluate the renormalization of order parameters induced by quantum fluctuations, but can also detect the topological quantum phases. Additionally, we discuss the extensions of DMMFT for systems at finite temperatures and those with disorders. Our work provides an efficient approach to explore phases exhibiting unconventional quantum orders, which can be particularly beneficial for investigating frustrated spin systems in high spatial dimensions.

Physics↗
DOE OSTI2024

Replica symmetry breaking in spin glasses in the replica-free Keldysh formalism

We show that the algebra of Parisi ultrametric matrices is recovered by the real-time, replica-free, Dyson-Keldysh equations of infinite-range quantum spin glasses in the late time glassy limit. This connects to earlier results on classical and quantum systems showing how ultrametricity emerges from the persistent slow aging dynamics of the glass phase. The stationary spin glass state thereby spontaneously breaks thermal symmetry, or the Kubo-Martin-Schwinger relation of a state in global thermal equilibrium. We describe the Keldysh path integral of the infinite-range Ising model in transverse and longitudinal fields, and in the context of the Landau expansion of the action functional, show how the long-time limit connects to the full replica symmetry breaking obtained in the equilibrium formalism. We also illustrate our formalism by applying it to the spherical quantum p p -spin model, which only exhibits one-step replica symmetry breaking.

Lang, Johannes (ORCID:0000000283533392)↗