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At least 865 records · Page 48

Identification and overexpression of endogenous transcription factors to enhance lipid accumulation in the biotechnologically relevant species Chlamydomonas pacifica

Sustainable low-carbon energy solutions are critical to mitigating global carbon emissions. Algae-based platforms offer potential by converting carbon dioxide into valuable products while aiding carbon sequestration. However, scaling algae cultivation faces challenges like contamination in outdoor systems. Previously, our lab evolved Chlamydomonas pacifica, an extremophile green alga, which tolerates high temperature, pH, salinity, and light, making it ideal for large-scale bioproduct production, including biodiesel. Here, we enhanced lipid accumulation in evolved C. pacifica by identifying and overexpressing key endogenous transcription factors through genome-wide in-silico analysis and in-vivo testing. These factors include Lipid Remodeling Regulator 1 (CpaLRL1), Nitrogen Response Regulator 1 (CpaNRR1), Compromised Hydrolysis of Triacylglycerols 7 (CpaCHT7), and Phosphorus Starvation Response 1 (CpaPSR1). Under nitrogen deprivation, CpaLRL1, CpaNRR1, and CpaCHT7 overexpression enhanced lipid accumulation compared to wild-type. However, CpaPSR1 increased lipid accumulation compared to wild-type in normal media and did not increase further under nitrogen deprivation, highlighting the difference in function based on media conditions. Notably, lipid analysis of CpaPSR1 under normal media conditions revealed a 2.4-fold increase in triglycerides (TAGs) compared to the wild-type, highlighting its potential for biodiesel production. This approach provides a framework for transcription factor-focused metabolic engineering in algae, advancing bioenergy and biomaterial production.

Biofuels↗

On the Role of Macrophysics and Microphysics in Km-Scale Simulations of Mixed-Phase Clouds During Cold Air Outbreaks

Regional atmospheric models struggle to maintain supercooled liquid in mixed-phase clouds during polar cold-air outbreaks (CAOs). Previous studies focused on the parameterization of aerosol, microphysics and turbulence to understand the origin of this widespread model bias. This study investigates the role of sub-grid cloud fraction parameterizations (CFP) in the simulation of mixed-phase cloud. Km-scale simulations are performed for a large number of CAO cases over Norway, for which continuous ground observations were collected at one site over 6 months. We use a novel analysis that attributes the cloud-radiative errors to deficiencies in specific cloud regimes. We show that the CFP matters for cloud-radiative effects in CAOs, but that it is probably not the primary cause of the lack of liquid water in simulated mixed-phase clouds. Of all the CFP sensitivities explored in this study, the prognostic representation of both liquid and ice shows most promise in increasing the liquid water path. A newly proposed hybrid CFP with prognostic frozen and diagnostic liquid cloud fraction reproduces some of the benefits of the prognostic scheme at reduced cost and complexity. All simulations appear to produce too large precipitation particles. As a result, reducing the snow deposition rate increases the liquid water path and improves the precipitation size distributions, while simulations are less sensitive to reduced riming rates.

54 ENVIRONMENTAL SCIENCES↗

Enriched East Asian oxygen isotope of precipitation indicates reduced summer seasonality in regional climate and westerlies

Speleothem oxygen isotope records over East Asia reveal apparently large and rapid paleoclimate changes over the last several hundred thousand years. However, what the isotopic variation actually represent in terms of the regional climate and circulation is debated. We present an answer that emerges from an analysis of the interannual variation in amount-weighted annual δ 18 O of precipitation over East Asia as simulated by an isotope-enabled model constrained by large-scale atmospheric reanalysis fields. 18 O-enriched years have reduced summer seasonality both in terms of precipitation isotopes and in the large-scale circulation. Changes occur between June and October, where the δ 18 O of precipitation (δ 18 O p ) transitions from the isotopically heavier winter to the lighter summer regime. For 18 O-enriched years, this transition is less pronounced. Variations in precipitation amount alone are insufficient to explain the amount-weighted annual δ 18 O p between 18 O-enriched and 18 O-depleted years. Reduced summer seasonality is also expressed in the low-level monsoonal southerlies and upper-level westerlies; for the latter, the northward migration across the Tibetan Plateau in the summer is less pronounced. Our result thus implicates the westerlies across the plateau as the proximate cause of East Asian paleomonsoon changes, manifested as a modulation of its summer peak.

54 ENVIRONMENTAL SCIENCES↗

Technology and times scales in Photonic Doppler Velocimetry (PDV)

Photonic Doppler Velocimetry (PDV) is a fiber-based measurement amenable to a wide range of experimental conditions. Interference between two optical signals—one Doppler shifted and the other not—is the essential principle in these measurements. A confluence of commercial technologies, largely driven by the telecommunication industry, makes PDV particularly convenient at near-infrared wavelengths. This discussion considers how measurement time scales of interest relate to the design, operation, and analysis of a PDV measurement, starting from the steady state through nanosecond resolution. Benefits and outstanding challenges of PDV are summarized, with comparisons to related diagnostics.

47 OTHER INSTRUMENTATION↗

Strategies for community-sourced biocuration in bioinformatics: a case study on MIBiG 4.0

Biocuration is essential to transform molecular sequence data into standardized, machine-readable resources. Such curated datasets enable comparative analysis, predictive modeling, and data integration across bioinformatics platforms. While professional biocuration is resource-intensive and usually limited to institutional settings, community-driven approaches can mobilize large-scale annotation of specialized datasets and are more resilient to disruptions in scientific funding. Here, we present a model for community-powered curation applied to the Minimum Information about a Biosynthetic Gene Cluster (MIBiG) repository. Through a framework of workflows for metadata capture, annotation validation, and contributor coordination, the MIBiG 4.0 initiative recruited 267 scientists across 178 institutions from 33 countries, volunteering an estimated 4000 h of work. These efforts expanded the MIBiG repository by 22% and enhanced its usability in downstream molecular data analyses in comparative genomic analyses, natural product discovery, and machine learning applications. We provide strategies and actionable lessons for adopting this model, supporting the sustainability of curated bioinformatics resources central to nucleic acid research and related fields.

biocuration↗

In-Plane Anisotropy of Charge Density Wave Fluctuations in 1⁢𝑇−TiSe 2

We report measurements of anisotropic triple-𝑞 charge density wave (CDW) fluctuations in the transition metal dichalcogenide 1⁢𝑇−TiSe 2 over a large volume of reciprocal space with x-ray diffuse scattering. Above the transition temperature, 𝑇 CDW , the in-plane diffuse scattering is marked by ellipses which reveal that the in-plane fluctuations are anisotropic. In addition, the out-of-plane diffuse scattering is characterized by rodlike structures which indicate that the CDW fluctuations in neighboring layers are largely decoupled. Furthermore, our analysis of the diffuse scattering line shapes and orientations suggests that the three charge density wave components contain independent phase fluctuations with a hierarchy of length scales, leading to intricate fluctuation patterns that go beyond the conventional 2D-to-3D crossover picture.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Deep Direct-Use Geothermal Feasibility Study for Hawthorne NV

The Hawthorne Nevada, deep direct-use geothermal study is a two-year effort funded by the U.S. Department of Energy to determine the techno-economic feasibility of implementing a large-scale, direct-use facility for the Hawthorne Army Depot (HAD) and the public facilities of the city of Hawthorne and Mineral County. The approach links a production side analysis (PSA) and a demand side analysis (DSA) into a whole-system analysis (WSA) to provide an integrated assessment of the resource and the probability of delivering economically viable direct-use energy to Hawthorne. Hawthorne, Nevada is in the western part of the Basin and Range province and has been the focus of geothermal investigations for over 40 years. Over the last 15 years, several studies completed by the U.S. Navy Geothermal Program Office (GPO) in conjunction with industry professionals quantified the existence of several low temperature geothermal prospects, the most promising of which is called Prospect A. The promise of Prospect A is based on drilling and flow testing that produced ~100 °C water at flow rates of up to 31 l/s (500 gallons per minute). Measured productivity indexes range from 40-85 l/s/MPa, suggesting a warm and productive heat source. Despite the promise of the resource, uncertainties in its spatial extent and long-term sustainability mean that techno-economic analyses must include probabilities of the sustainability of the resource under different operating scenarios. Here, the PSA is conducted by integrating a wide range of disparate data to estimate lognormal P90, P50, and P10 resource capacities. These capacities are used as input to a thermal-hydrologic (T-H) model to estimate thermal drawdown for each capacity estimate for several different DSA scenarios. Using a systems-based approach, the WSA links the dynamic T-H simulations of the PSA/DSA combinations with the techno-economic model GEOPHIRES to account for both the temporal dynamics and uncertainties in the system to produce probabilistic distributions of several performance metrics including the levelized cost of heat (LCOH) and the return on investment (ROI). This report is the final delivery for the project and documents the study's activities and results.

15 GEOTHERMAL ENERGY↗

Deep-Learning-Based Segmentation of Keyhole in In-Situ X-ray Imaging of Laser Powder Bed Fusion

In laser powder bed fusion processes, keyholes are the gaseous cavities formed where laser interacts with metal, and their morphologies play an important role in defect formation and the final product quality. The in-situ X-ray imaging technique can monitor the keyhole dynamics from the side and capture keyhole shapes in the X-ray image stream. Keyhole shapes in X-ray images are then often labeled by humans for analysis, which increasingly involves attempting to correlate keyhole shapes with defects using machine learning. However, such labeling is tedious, time-consuming, error-prone, and cannot be scaled to large data sets. To use keyhole shapes more readily as the input to machine learning methods, an automatic tool to identify keyhole regions is desirable. In this paper, a deep-learning-based computer vision tool that can automatically segment keyhole shapes out of X-ray images is presented. The pipeline contains a filtering method and an implementation of the BASNet deep learning model to semantically segment the keyhole morphologies out of X-ray images. The presented tool shows promising average accuracy of 91.24% for keyhole area, and 92.81% for boundary shape, for a range of test dataset conditions in Al6061 (and one AliSi10Mg) alloys, with 300 training images/labels and 100 testing images for each trial. Prospective users may apply the presently trained tool or a retrained version following the approach used here to automatically label keyhole shapes in large image sets.

36 MATERIALS SCIENCE↗

Probing multi-dimensional composition spaces in search of strong metallic alloys

Refractory complex concentrated alloys (RCCA) offer exceptionally high-temperature strength compared to pure metals and dilute alloys, but predictive theory for RCCA design is lacking. We present large-scale molecular Dynamics (MD) simulations of crystal plasticity to explore alloy compositions for maximum mechanical strength, focusing on Fe-Ta-W and Nb-Ta-Mo-W alloy families modeled with Embedded Atom Model (EAM) and Spectral Neighbor Analysis Potentials (SNAP). To efficiently guide the search for strong alloy compositions, we employ iterative optimization using Gaussian process regression. Many simulated RCCA compositions exhibit pronounced cocktail strengthening, with strengths surpassing their strongest constituent metal, tungsten. Contrary to expectations, the highest strength is found on binary edges of the RCCA composition space. Detailed analyses of atomistic simulations reveal that, similar to pure BCC metals, plastic response in RCCA is primarily governed by screw dislocations. However, at large strains, dislocation multiplication and interactions (Taylor hardening) become the dominant mechanisms contributing to RCCA strength.

Materials science↗

Scalability of high-performance PDE solvers

Performance tests and analyses are critical to effective high-performance computing software development and are central components in the design and implementation of computational algorithms for achieving faster simulations on existing and future computing architectures for large-scale application problems. In this article, we explore performance and space-time trade-offs for important compute-intensive kernels of large-scale numerical solvers for partial differential equations (PDEs) that govern a wide range of physical applications. We consider a sequence of PDE-motivated bake-off problems designed to establish best practices for efficient high-order simulations across a variety of codes and platforms. We measure peak performance (degrees of freedom per second) on a fixed number of nodes and identify effective code optimization strategies for each architecture. In addition to peak performance, we identify the minimum time to solution at 80% parallel efficiency. The performance analysis is based on spectral and p-type finite elements but is equally applicable to a broad spectrum of numerical PDE discretizations, including finite difference, finite volume, and h-type finite elements.

97 MATHEMATICS AND COMPUTING↗

Subtropical Eastern North Pacific SST bias in earth system models

Karthik Balaguru (PNNL), Luke Van Roekel (LLNL), L. Ruby Leung (PNNL) and Milena Veneziani (LLNL) Abstract: This study systematically evaluates the warm SST bias in the Subtropical Eastern North Pacific (SENP), a problem plaguing most CMIP6 models, using the Energy Exascale Earth System Model version 1 (E3SM). Compared to the model at its standard resolution (1o atmosphere, 30-60 km ocean), the SST bias improves in several regions at high resolution (0.25o atmosphere, 18-6 km ocean) except in subtropical eastern boundary regions, such as the SENP. A mixed layer heat budget analysis reveals that errors in the surface radiative fluxes and horizontal heat advection are primarily responsible for the bias. Analysis of HighResMIP models indicates that the lack of improvement in the SENP SST bias with resolution is not native to E3SM alone. A larger CMIP6 inter-model correlation of SST bias with biases in surface winds than radiation highlights the important role of large-scale circulation biases in the SENP SST bias in coupled models.

Balaguru, Karthik↗

Design analysis of a particle-based thermal energy storage system for concentrating solar power or grid energy storage

Energy storage is becoming indispensable for expanding renewable energy integration, and it is critical to the future low-carbon energy supply. Large-capacity, grid scale energy storage can support the integration of solar and wind power and support grid resilience with the diminishing capacity of baseload fossil power plants. With the development of thermal energy storage (TES) for concentrating solar power systems, standalone TES for grid integration becomes attractive due to the declining renewable generation cost and an increasing need for energy storage. The standalone TES system introduced in this paper can play a big role in the carbon-free energy future with capacity larger than batteries and cost likely lower than other energy storage methods such as pumped storage hydropower and compressed air energy storage, both of which also have geological limitations. To this end, we describe a TES system that uses stable, inexpensive solid particles as a TES media to provide scalable, low cost energy storage. The particle-based TES has the ability to drive various thermal power cycles including conventional steam-Rankine, air Brayton turbine with combined-cycle ability, or the emerging supercritical carbon dioxide Brayton power cycle. This work describes the containment design method including a concrete silo and an internal-insulation layer for the particle-TES system. The economic analysis shows significantly low storage cost when the particle-TES is integrated with Brayton combined-cycle power generation. The paper shows the design approach of the particle-TES system and its economic potential for bulk energy storage. The advantage of the particle-TES system as a promising bulk energy storage method is its ability to economically support dispatchable renewable grid penetration for larger capacity and longer discharging hours than current battery storage technologies.

25 ENERGY STORAGE↗

A novel approach for large-scale wind energy potential assessment

Increasing wind energy generation is central to grid decarbonization, yet methods to estimate wind energy potential are not standardized, leading to inconsistencies and even skewed results. This study aims to improve the fidelity of wind energy potential estimates through an approach that integrates geospatial analysis and machine learning (i.e., Gaussian process regression). We demonstrate this approach to assess the spatial distribution of wind energy capacity potential in the Contiguous United States (CONUS). We find that the capacity-based power density ranges from 1.70 MW/km2 (25th percentile) to 3.88 MW/km2 (75th percentile) for existing wind farms in the CONUS. The value is lower in agricultural areas (2.73 ± 0.02 MW/km2, mean ± 95 % confidence interval) and higher in other land cover types (3.30 ± 0.03 MW/km2). Notably, advancements in turbine manufacturing could reduce power density in areas with lower wind speeds by adopting low specific-power turbines, but improve power density in areas with higher wind speeds (>8.35 m/s at 120m above the ground), highlighting opportunities for repowering existing wind farms. Wind energy potential is shaped by wind resource quality and is regionally characterized by land cover and physical conditions, revealing significant capacity potential in the Great Plains and Upper Texas. The results indicate that areas previously identified as hot spots using existing approaches (e.g., the west of the Rocky Mountains) may have a limited capacity potential due to low wind resource quality. Improvements in methodology and capacity potential estimates in this study could serve as a new basis for future energy systems analysis and planning.

Dai, Tao↗

Electrode Erosion and Prefire Studies Towards Fusion Scale Pulsed Power

This study presents a comprehensive investigation of electrode erosion and discharge behavior in spark gap switches over long switching cycle lifetimes. Brass, copper–tungsten (CuW), and stainless steel electrodes are tested under controlled conditions to quantify material degradation, debris accumulation, and changes in breakdown voltage. High-resolution imaging and statistical analysis of spark channel locations and gap breakdown voltages reveal how surface evolution influences long-term performance and reliability. These results provide essential data for lifetime modeling and inform design strategies for pulsed power systems in emerging applications such as private sector fusion energy and large-scale facilities like Sandia’s Z Machine and proposed ZX upgrades, where high repetition reliability and predictable behavior are critical.

electrical breakdown↗

Grid Utility Asset Vulnerability Assessment (GUAVA) Software Tool

Increasing demand and changes in generation portfolios is pushing power grid to operate towards the limit. However, due to lack of analytical tools for understanding various scales of impact on grid, it is becoming more vulnerable to wide scale power outages and blackouts. A vulnerable grid operating at its limit can be easily disrupted by asset failures caused by devastating hurricanes which has been known to damage transmission and distribution lines along its track. In this direction, researchers have focused on determining these assets by conducting Monte Carlo simulations of hurricanes with uncertainties and collected a large set of simulation data. To determine the infrastructure updates necessary for mitigating wide scale impact of hurricanes on the grid, we propose a software tool named “Grid Utility Asset Vulnerability Analysis” (GUAVA) framework. GUAVA presents a novel data-driven probabilistic analytical approach to (1) post-process hurricane failure scenarios, (2) identify/rank assets that are most vulnerable and critical to failing and are associated with highest impact/risk, and (3) to inform system upgrade decisions & prioritization. Based on the observed results and employed data-driven methodology, it is expected GUAVA can be adapted to provide power system planners with a recommendation engine for making informed decisions to improve resilience of grid.

Mahapatra, Kaveri↗

Market Implications of Alternative Operating Reserve Modeling in Wholesale Electricity Markets

Pricing and settlement mechanisms are crucial for efficient resource allocation, investment incentives, market competition, and regulatory oversight. In the United States, Regional Transmission Operators (RTOs) adopts a uniform pricing scheme that hinges on the marginal costs of supplying additional electricity. This study investigates the pricing and settlement impacts of alternative reserve constraint modeling, highlighting how even slight variations in the modeling of constraints can drastically alter market clearing prices, reserve quantities, and revenue outcomes. Focusing on the diverse market designs and assumptions in ancillary services by U.S. RTOs, particularly in relation to capacity sharing and reserve substitutions, the research examines four distinct models that combine these elements based on a large-scale synthetic power system test data. Our study provides a critical insight into the economic implications and the underlying factors of these alternative reserve constraints through market simulations and data analysis.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Fire, insect and disease‐caused tree mortalities increased in forests of greater structural diversity during drought

Abstract Structural diversity is an emerging dimension of biodiversity that accounts for size variations in organs among individuals in a community. Previous studies show significant effects of structural diversity on forest growth, but its effects on forest mortality are not known, particularly at a large scale. To address this knowledge gap, we quantified structural diversity using stem structural diversity (SSD) based on both tree diameter and height. We obtained U.S. Forest Service Forest Inventory and Analysis (FIA) data from over 2400 plots across southcentral U.S. forests that have suffered a recent drought. Using data from multiple sampling times, we calculated SSD and compared the relative importance of SSD, species diversity, functional diversity and other stand attributes in determining tree mortalities caused by fire, insects and diseases. We also used FIRETEC, a physics‐based fire model, to test the effect of SSD on canopy consumption by fire. Our results showed that (1) SSD was positively associated with tree mortalities caused by all three disturbances; (2) species richness was negatively associated with insect‐ and disease‐caused mortalities; (3) functional diversity was negatively associated with fire‐ and disease‐caused mortalities and (4) more phylogenetically related species had more similar mortality rates by insect and disease but not fire. Moreover, the FIRETEC model showed increasing canopy consumption by fire in stands with greater SSD. Together, the different tree mortalities during drought associated with SSD more consistently than the other biodiversity metrics were evaluated. Synthesis . Our results suggest that SSD could be considered in modelling forest dynamics and planning management to sustain forest health under disturbances.

54 ENVIRONMENTAL SCIENCES↗

Particle Handling in Particle-Based Pumped Thermal Energy Storage

A particle-based pumped thermal electricity storage system stores high-temperature heat (~1000 degrees C) in low-cost silica sand and generates power through an efficient power cycle. Central to this system is a counterflow direct-contact gas/particle fluidized-bed heat exchanger, which can significantly improve the heat exchange process due to the large heat transfer surface area of particles. To showcase a lab-scale 10- to 20-kWe heat exchange process with particles heating up to 300 degrees C, a comprehensive hydrodynamic analysis of the fluidization condition inside the heat exchanger was conducted. The heat exchanger was designed to target for heat exchange process of 10-20 kW and accommodate an air mass flow rate of 0.3-0.7 kg/s. The fluidization condition was set to maintain stable bubbling fluidization, thereby maximizing the particle-to-air heat transfer. An air distributor was designed to equally distribute air over the bed, which can avoid defluidized zones in the heat exchanger. Additionally, particle handling systems including L-valves, screw conveyors, and pneumatic conveyors were developed for the prototype heat exchanger, efficiently conveying high-temperature particles at 0.2-0.5 kg/s. This work lays the foundation for scaling up the system and integrating it into larger energy storage applications, demonstrating its potential for efficient, high-temperature thermal energy storage and power generation.

25 ENERGY STORAGE↗