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At least 865 records · Page 48

Computational analysis of an autophagy/translation switch based on mutual inhibition of MTORC1 and ULK1

We constructed a mechanistic, computational model for regulation of (macro)autophagy and protein synthesis (at the level of translation). The model was formulated to study the system-level consequences of interactions among the following proteins: two key components of MTOR complex 1 (MTORC1), namely the protein kinase MTOR (mechanistic target of rapamycin) and the scaffold protein RPTOR; the autophagy-initiating protein kinase ULK1; and the multimeric energy-sensing AMP-activated protein kinase (AMPK). Inputs of the model include intrinsic AMPK kinase activity, which is taken as an adjustable surrogate parameter for cellular energy level or AMP:ATP ratio, and rapamycin dose, which controls MTORC1 activity. Outputs of the model include the phosphorylation level of the translational repressor EIF4EBP1, a substrate of MTORC1, and the phosphorylation level of AMBRA1 (activating molecule in BECN1-regulated autophagy), a substrate of ULK1 critical for autophagosome formation. The model incorporates reciprocal regulation of mTORC1 and ULK1 by AMPK, mutual inhibition of MTORC1 and ULK1, and ULK1-mediated negative feedback regulation of AMPK. Through analysis of the model, we find that these processes may be responsible, depending on conditions, for graded responses to stress inputs, for bistable switching between autophagy and protein synthesis, or relaxation oscillations, comprising alternating periods of autophagy and protein synthesis. A sensitivity analysis indicates that the prediction of oscillatory behavior is robust to changes of the parameter values of the model. The model provides testable predictions about the behavior of the AMPK-MTORC1-ULK1 network, which plays a central role in maintaining cellular energy and nutrient homeostasis.

59 BASIC BIOLOGICAL SCIENCES↗

IACMI Project 4.7: Pultruded Textile Carbon Fiber for Spar Caps (Final Report)

The primary objective of this project was to demonstrate the potential to significantly reduce the cost of wind turbine blades with carbon fiber reinforced polymer (CFRP) structure. Applicability of textile carbon fibers (TCF) were evaluated for use in pultruded spar cap (SC) elements as a path to cost reduction for utility scale wind turbine blades. In earlier work for the Department of Energy (DOE) Wind Energy Technologies Office (WETO), a collaboration of Sandia National Laboratory (SNL), Oak Ridge National Laboratory (ORNL), and Montana State University has demonstrated potential for pultruded TCF to compete with infused fiberglass and commercially available carbon fiber pultruded sections for spar cap construction. In the design cases evaluated, the TCF sections fared well when compared on cost per unit composite stiffness and cost per unit composite compressive strength for those designs [1]. Both stiffness and compressive strength tend to be key factors in the design of blade composite Spar Cap which carry the bulk of the blade structural loads in bending. Spar Cap design tends to distribute largely symmetric tensile and compressive stresses to opposite sides of the spar structure, but since carbon fiber composite compressive strength is typically 20-50% lower than tensile strength, the compressive loading reaches failure levels well before the tensile loading. Stiffness is critical in containing the large tip deflection in high wind loading situations. However, materials and process development were very limited in the earlier study and the work in this project was expanded to make the comparative information more representative of what will be required in order to make further inroads towards implementation. Similar to that study, this project team confirmed that the primary materials of interest for pultruded spar cap elements should be thermoset (TS) resins reinforced by carbon fibers, utilizing as high a percentage of TCF as practical to benchmark cost and performance against commercial carbon fibers. To make the closest comparison possible and eliminate specific test article size, resin selection, and equipment/operational nuance effects, the team planned to pultrude sections with 100% commercially available carbon fiber (Panex 35 carbon fiber from Zoltek) as well as samples utilizing high fractions of TCF. The resin system chosen was based on formulations recommended by large wind industry supplier Hexion and consisted of Hexion resin RSL-4597, curing agent CCA-138, and internal mold release additive 117, along with common kaolin filler ASP400P from BASF. As commonly deployed in spar cap configurations, the team had a mold built to pultrude a rectangular spar cap element of 100mm width and 3mm thickness. The extremely limited number of samples produced for the earlier study were produced with a “generic” epoxy utilized for a variety of applications by the pultruder contracted to produce test articles for demonstration purposes. More importantly, those samples were produced at a fiber fraction only slightly over 50%. Based on feedback from our industrial advisory team for that project and strongly recommended by this project team, the consensus is that it is highly desirable to obtain fiber fractions of 65-68% for significant penetration in wind blade spar cap. Although this requirement has yet to be exhaustively confirmed in readily available information, this was established as a project goal and informally decided we needed to exceed 60% fiber fraction to gain serious industry consideration. Previous TCF pultrusion trials have been challenged by the lack of robust TCF packages, resulting in non-uniform tension across and between tows, as well as excess labor and waste for removal of interleaved paper. The non-uniform tension and associated intermingling of tows in textile acrylic fiber tows and associated difficulties created from broken filaments in carbon fiber conversion inhibit the ordered packing necessary to enhance fiber fraction elevation. (These “cross-overs” are not considered undesirable for textile applications and there is some sense that they might be advantageous for those applications). In addition to work that is ongoing at the acrylic fiber manufacturers to improve their formats, The Institute of Advanced Composites Manufacturing Innovation (IACMI) Project 6.12 (report PA16-0349-6.12-01) [2] has developed and demonstrated a more robust packaging and creeling approach that at least partially addresses these issues, thus improving control of the TCF feed into the pultrusion unit. It was hoped that these and other improvements currently being implemented would allow us to achieve fiber fractions at least approaching these fiber fraction targets. During this project, sections utilizing 100% commercially available carbon fiber reinforcement were produced as a baseline, as well as sections reinforced with about 94% TCF and the balance being commercially available fiber for comparison. The most important finding was that similar to results reported in the earlier WETO-funded project and results from tests of TCF reported at IACMI meetings, this work demonstrated that sections pultruded with TCF in an epoxy resin frequently utilized in actual spar cap production had stiffness and compressive strengths largely comparable to similar sections pultruded with a commercially available carbon fiber also frequently utilized in the wind industry. Although the amount of that data is limited, some of the tensile strength results were actually closer than would have been expected based on fiber strength results provided by the TCF and commercial fiber producers. The actual test data are reported and discussed in detail in Section 5. The pultruded sections dominated by TCF reinforcement were approximately 8-10% lower in fiber fraction than for the sections produced using commercial fiber alone, making direct comparison difficult. The COVID-19 project has provided significant insight into the current state-of-the-art with various TCF product forms. The data obtained in this project will guide the planned improvements at the precursor level, especially in attaining uniform tensioning and payout to facilitate enhanced fiber fractions and overall processability of the TCF composites. The project team is providing guidance to stakeholders concerning the attributes, needs, and potential demand for TCF in wind blade spar caps. Results achieved in this project are consistent with findings in the related work cited [1] and support this guidance and the high potential for this product type. TCF precursor-producing partners continue to express interest in enhancing their product forms and the team looks forward to working with these improved materials as they become available.

42 ENGINEERING↗

Functional Redundancy in Soil Microbial Community Based on Metagenomics Across the Globe

Understanding the contribution of soil microbial communities to ecosystem processes is critical for predicting terrestrial ecosystem feedbacks under changing climate. Our current understanding lacks a consistent strategy to formulate the linkage between microbial systems and ecosystem processes due to the presumption of functional redundancy in soil microbes. Here we present a global soil microbial metagenomic analysis to generalize patterns of microbial taxonomic compositions and functional potentials across climate and geochemical gradient. Our analyses show that soil microbial taxonomic composition varies widely in response to climate and soil physicochemical gradients, while microbial functional attributes based on metagenomic gene abundances are redundant. Among 17 climate zones, microbial taxonomic compositions were more distinct than functional potentials, as climate and edaphic properties showed more significant influence on microbial taxonomic compositions than on functional potentials. Microbial taxonomies formed a larger and more complex co-occurrence network with more module structures than functional potentials. Functional network was strongly inter-connected among different categories, whereas taxonomic network was more positively interactive in the same taxonomic groups. This study provides strong evidence to support the hypothesis of functional redundancy in soil microbes, as microbial taxonomic compositions vary to a larger extent than functional potentials based on metagenomic gene abundances in terrestrial ecosystems across the globe.

59 BASIC BIOLOGICAL SCIENCES↗

Applications of Multibody for Everybody (M4E) in Marine Energy

Multibody for Everybody (M4E) is an open-source symbolic dynamics modeling framework designed to automate the derivation of equations of motion and simulation of constrained multibody systems using the joint coordinate formulation.

16 TIDAL AND WAVE POWER↗

A survey of modal synthesis methods.

Several modal synthesis procedures for the dynamic analysis of largy composite structural systems are surveyed. The matrix formulation of the free-free modal synthesis procedures is presented. Also given are schematic flow charts of the analysis procedure used in three prominent methods. The advantages and disadvantages of several modal synthesis methods for different classes of structural problems are presented in order to enable the engineer to select the best procedure for his particular type of problem.

Hart, G. C.↗

High speed flow past wings

The analytical solution to the transonic small perturbation equation which describes steady compressible flow past finite wings at subsonic speeds can be expressed as a nonlinear integral equation with the perturbation velocity potential as the unknown function. This known formulation is substituted by a system of nonlinear algebraic equations to which various methods are applicable for its solution. Due to the presence of mathematical discontinuities in the flow solutions, however, a main computational difficulty was to ensure uniqueness of the solutions when local velocities on the wing exceeded the speed of sound. For continuous solutions this was achieved by embedding the algebraic system in an one-parameter operator homotopy in order to apply the method of parametric differentiation. The solution to the initial system of equations appears then as a solution to a Cauchy problem where the initial condition is related to the accompanying incompressible flow solution. In using this technique, however, a continuous dependence of the solution development on the initial data is lost when the solution reaches the minimum bifurcation point. A steepest descent iteration technique was therefore, added to the computational scheme for the calculation of discontinuous flow solutions. Results for purely subsonic flows and supersonic flows with and without compression shocks are given and compared with other available theoretical solutions.

Norstrud, H.↗

The inclusion problem with a crack crossing the boundary

The problem of an elastic plane containing an elastic inclusion is considered. It is assumed that both the plane and the inclusion contain a radial crack and the two cracks are collinear. The problem is formulated in terms of a system of singular integral equations. In the interesting limiting cases in which the crack tips approach the interface from either one or both sides, the dominant parts of the kernels become generalized Cauchy kernels giving rise to stress singularities of other than minus 1/2 power. For these unusual cases of a crack terminating at or crossing the interface stress intensity factors are defined and some detailed results are given for various crack-inclusion geometries and material combinations.

Erdogan, F.↗

SIRU development. Volume 1: System development

A complete description of the development and initial evaluation of the Strapdown Inertial Reference Unit (SIRU) system is reported. System development documents the system mechanization with the analytic formulation for fault detection and isolation processing structure; the hardware redundancy design and the individual modularity features; the computational structure and facilities; and the initial subsystem evaluation results.

Gilmore, J. P.↗

Approximations in the minimum time-to-climb problem

The minimum time-to-climb problem is formulated as a third order system and three approximate solutions based on reduced order systems are presented. The first of these is the often used energy state, the second is the less frequently used two state and the third is a slightly altered form of the second, herein called the modified two state. These three approximations are discussed and compared both qualitatively and, by using a numerical example, quantitatively. The numerical example is also solved by the steepest descent method to provide a basis for comparison. It is concluded that the modified two state approximation is significantly better than the other two. This approximation is used to assess the sensitivity of climb performance to various vehicle parameters and it is found that, as expected, thrust and weight influence the time-to-climb most strongly.

Ardema, M. D.↗

Information preserving coding for multispectral data

A general formulation of the data compression system is presented. A method of instantaneous expansion of quantization levels by reserving two codewords in the codebook to perform a folding over in quantization is implemented for error free coding of data with incomplete knowledge of the probability density function. Results for simple DPCM with folding and an adaptive transform coding technique followed by a DPCM technique are compared using ERTS-1 data.

Duan, J. R.↗

The 1973 GSFC battery workshop, second day

Technological progress in the development, testing, and manufacturing of nickel-cadmium battery cells as well as hydrogen cells is presented. The following major topics were discussed: (1) carbonate analysis; (2) nickel-cadmium memory effect; (3) use of batteries in an automatic acquisition and control system; (4) accelerated testing; (5) formulation of a mathematical odel for a nickel-cadmium cell; (6) development of a light weight nickel-cadmium battery capable of delivering 20 watt hours per pound; (7) magnetic testing of nickel-cadmium cells; (8) design and performance characteristics of nickel-hydrogen and silver-hydrogen cells; and (9) development of a semiprismatic cell design. For Vol. 1, see N75-15152.

Source record↗

A Kalman filter for the Stoland system

A simple Kalman filter for potential use in STOL navigation systems is described. The mathematical formulation of all the elements of the filter, its initialization and overall operation are presented. Simulation results show that a typical approach flight to landing, the Kalman filter has much smaller errors during navigation on TACAN data and during transition from TACAN to MODILS data than a complementary filter. Summary type flow charts of the Kalman filter logic designed for the Sperry 1819A computer are presented. Also, the memory and real time requirements of the Kalman filter and complementary filter are described. The Kalman filter is shown to gain its superior performance at the expense of real time and memory required in the onboard computer.

Schmidt, S. F.↗

The inclusion problem with a crack crossing the boundary

A solution is given to the problems of a crack in an elastic inclusion with one or both ends approaching and terminating at the interface, of two collinear cracks (one in the inclusion and one in the matrix), and of a crack crossing the interface. The problems are formulated in terms of a system of singular integral equations. In the second case, the dominant parts of the kernels become generalized Cauchy kernels giving rise to stress singularities of powers other than one over the square root. For this case stress intensity factors are defined and some detailed results are presented for various crack-inclusion geometries and material combinations.

Erdogan, F.↗

Fracture of composite panels

The fracture problem in panels consisting of periodically arranged load carrying and buffer strips of different materials is considered. The main emphasis is placed on the problem of a crack terminating at and crossing the interfaces and on the stress free end problem. The problem is formulated in terms of a system of singular integral equations, and numerical solutions are obtained for certain material combinations. With the study of possible crack propagation and delamination in mind, certain stress intensity factors are defined and calculated. A main result is that when the crack touches or intersects a bimaterial interface, the stress state has no longer the standard square root singularity, and, to study further propagation of the crack, the conventional fracture models need to be modified, or new models need to be developed.

Erdogan, F.↗

Retrospective studies of operating problems in air transport

An epidemiological model for the study of human errors in aviation is presented. In this approach, retrospective data are used as the basis for formulation of hypotheses as to system factors which may have contributed to such errors. Prospective experimental studies of aviation operations are also required in order to prove or disprove the hypotheses, and to evaluate the effectiveness of intervention techniques designed to solve operational problems in the aviation system.

Billings, C. E.↗

Stress-intensity factors for a wedge-loaded edge crack in a semi-infinite strip

The problem of a semi infinite strip containing an edge crack is considered. It is assumed that the strip is loaded by a frictionless rigid wedge pressed into the crack. The resulting crack contact problem is formulated in terms of a system of singular integral equations. The behavior of the solution near the singular points is studied in detail. A series of numerical examples are given and the results are compared with those obtained by the method of boundary collocation and by the simple beam theory.

Erodogan, F.↗

Tripropellant Engine Study

The feasibility of modifying the space shuttle main engine (SSME) for dual mode operation was investigated. Various high power cycle engine configurations derived from the SSME were configurations that will allow sequential burning of LOX/hydrocarbon and LOX/hydrogen were studied in order to identify concepts that make maximum use of SSME hardware and best satisfy the dual mode booster engine system application. Engine cycles were formulated for LOX/RP-1, LOX/CH4, and LOX/C3H8 propellants. Flow rates and operating cycles were established and the adaptability of the major components of the SSME was evaluated.

Wheeler, D. B.↗

The problem of an inclined crack in an orthotropic strip

The elastostatic problem for an infinite orthotropic strip containing crack was considered. It was assumed that the orthogonal axes of material orthotropy may have an arbitrary angular orientation with respect to the orthogonal axes of geometric symmetry of the uncracked strip. The crack was located along an axis of orthotropy, hence, at an arbitrary angle with respect to the sides of the strip. The general problem was formulated in terms of a system of singular integral equations for arbitrary crack surface tractions. As examples Modes 1 and 2 stress intensity factors were calculated for the strip having an internal or an edge crack with various lengths and angular orientations.

Delale, F.↗