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At least 865 records · Page 48

Separating Oil-Water Mixtures Using Bump Arrays

Particle separation is an important process step across many fields. One technique being applied for separating solids such as blood components or sand particles from carrier fluids is the use of arrays of aligned posts called deterministic lateral arrays to bump particles to one side in the flow stream to enhance separation. This technique may be useful for separation of deformable particles. The ability to efficiently separate two-phase industrial (oil/water) mixtures is key for future use of valuable resources. Over 1 trillion gallons of petroleum production water could be reclaimed annually for reuse in the drought-ridden western US states. The ability to reclaim this petroleum production water may be critical for the Central High Plains (Colorado, Kansas, Oklahoma, Texas, and New Mexico). Trends in just the High Plains area already lost 20 to 25% of the irrigated farming area due to insufficient ground water storage to irrigate, and farmland losses are expected to grow to 40%. Proving this technology is key to reuse of petroleum production water for crop irrigation or to replace water from currently failing aquifers in rich agricultural lands of the Central High Plains. We conducted experiments applying mesofluidic separation for flowing two-phase (oil/water) mixtures. Experiments were conducted using oils of differing viscosities with water as the carrier fluid; separation was achieved over a range of oil-water concentrations. We describe the results of these experiments in this paper.

oil-water separation, micelle, droplet separation,↗

Microbial Communities across Global Marine Basins Show Important Compositional Similarities by Depth

The environmental surveys following the 2010 Deepwater Horizon (DWH) spill identified a variety of hydrocarbon-degrading microorganisms, and laboratory studies with field-collected water samples then demonstrated faster-than-expected hydrocarbon biodegradation rates at 5°C. Knowledge about microbial community composition, diversity, and functional metabolic capabilities aids in understanding and predicting petroleum biodegradation by microbial communities in situ and is therefore an important component of the petroleum spill response decision-making process. This study investigates the taxonomic composition of microbial communities in six different global basins where petroleum and gas activities occur. Shallow-water communities were strikingly similar across basins, while deep-water communities tended to show subclusters by basin, with communities from the epipelagic, mesopelagic, and bathypelagic zones sometimes appearing within the same cluster. Microbial taxa that were enriched in the water column in the Gulf of Mexico following the DWH spill were found across marine basins. Several hydrocarbon-degrading genera (e.g., Actinobacteria, Pseudomonas, and Rhodobacteriacea) were common across all basins. Other genera such as Pseudoalteromonas and Oleibacter were highly enriched in specific basins.

59 BASIC BIOLOGICAL SCIENCES↗

Spatiotemporal analysis of lung immune dynamics in lethal Coccidioides posadasii infection

Coccidioidomycosis, or Valley fever, is a lung disease caused by inhalation of Coccidioides fungi, prevalent in the Southwestern United States, Mexico, and parts of Central and South America. Annually, the United States reports 10,000–20,000 cases, although those numbers are expected to increase as climate change expands the fungal geographic range. While 60% of infections are asymptomatic, 40% symptomatic infections are often misdiagnosed due to similarities with bronchitis or pneumonia. A small subset of infection progress to severe illness, necessitating a better understanding of immune responses during lethal infection. Using single-cell RNA sequencing and spatial transcriptomics, we characterized lung responses during Coccidioides infection. We identified monocyte-derived Spp1-expressing macrophages as potential mediators of tissue remodeling and fibrosis, marked by high expression of profibrotic and proinflammatory transcripts. These macrophages showed elevated TGF-β and IL-6 signaling, pathways involved in fibrosis pathogenesis. Additionally, we observed significant neutrophil infiltration and defective lymphocyte responses, indicating severe adaptive immunity dysregulation in lethal, acute infection. These findings enhance our understanding of Coccidioides infection and suggest new therapeutic targets.

59 BASIC BIOLOGICAL SCIENCES↗

Dating submarine landslides using the transient response of gas hydrate stability

Abstract Submarine landslides are prevalent on the modern-day seafloor, yet an elusive problem is constraining the timing of past slope failure. We present a novel age-dating technique based on perturbations to underlying gas hydrate stability caused by slide-impacted seafloor changes. Using three-dimensional (3-D) seismic data, we mapped an irregular bottom simulating reflection (BSR) underneath a submarine landslide in the Orca Basin, Gulf of Mexico. The irregular BSR mimics the pre-slide seafloor geometry rather than the modern bathymetry. Therefore, we suggest that the gas hydrate stability zone (GHSZ) is still adjusting to the post-slide sediment temperature. We applied transient conductive heat-flow modeling to constrain the response of the GHSZ to the slope failure, which yielded a most likely age of ca. 8 ka, demonstrating that gas hydrate can respond to landslides even on multimillennial time scales. We further provide a generalized analytical solution that can be used to remotely date submarine slides in the absence of traditional dating techniques.

Geology↗

Nonparametric Inference for the Reproductive Rate in Generalized Compartmental Models

We develop a tractable nonparametric model for the time-varying reproductive rate of infectious diseases that combines the structure of a deterministic compartmental model and a stochastic model for incidence data. We use Bayesian inference to estimate, with uncertainty, the reproductive rate of the Coronavirus 2019 outbreak in the U.S. states of California, Florida, Michigan, New Mexico, New York, and Texas from January 2020 to March 2022. Employing the inferred reproductive rates, we estimate the posterior distribution of the time-varying reproduction numbers for each state. Compering the time-varying reproduction numbers across the states, we identify some epidemic waves, potentially driven from changes in human behavior and virus mutations.

97 MATHEMATICS AND COMPUTING↗

Established Regulatory Limits for Surface Water and Groundwater

The regulatory limits for surface water and groundwater contained in this database comprise chemical-specific preliminary remediation goals (PRGs) based on potential Applicable or Relevant and Appropriate Requirements (ARARs). These values should be used in conjunction with PRGs based on risk assessment to ensure that the PRGs for a site meet the residual risk requirements for protection of human health and the environment in the National Oil and Hazardous Substance Pollution Contingency Plan (NCP). In some cases, the values presented in this database may be To-Be-Considered (TBC) Guidance because these values are superseded by site-specific state requirements. ARARs are available for the Federal government, California, Georgia, Illinois, Kentucky, New Jersey, New Mexico, Nevada, New York, Ohio, South Carolina, Tennessee, Washington, and Wisconsin. The dataset provides maximum contaminant levels for drinking water and water quality criteria for fresh and marine environments based on acute and chronic exposures. Users can select ARAR sources, drinking water standards and water quality standards, individual chemicals, and retrieve results in tabular or spreadsheet formats for analysis. ARARs are derived from authoritative sources, including federal and state government agencies. The dataset supports environmental risk assessments, regulatory decision-making, and environmental planning, with tools for benchmarking against promulgated standards. This structured approach ensures a robust evaluation of environmental risks tailored to regulatory needs.

Stewart, Debra [Oak Ridge National Laboratory (ORN↗

A Succession of Cloud, Precipitation, Aerosol and Air Quality Field Experiments in the Coastal Urban Environment

The interactions and feedbacks among clouds, aerosols, pollutants, and the thermodynamic and kinematic environment remains an area of active research with important implications for our understanding of climate, weather and air quality. These linkages are further complicated in coastal and urban environments where local circulations and anthropogenic influences impact each of these components and their interactions. Within this context, fundamental questions regarding the lifecycle of convective clouds, aerosols and pollutants have brought together a diverse, integrated, and interagency collaboration of scientists to collect and analyze measurements, in the Houston, Texas, area, from the summer of 2021 through the summer of 2022, with subsequent modeling studies to address these important research objectives. Herein, the U.S. Department of Energy’s Atmospheric Radiation Measurement (ARM) Facility and Atmospheric System Research (ASR) Program, the National Science Foundation’s (NSF) Physical and Dynamic Meteorology Program, the National Aeronautic and Space Administration’s (NASA’s) Tropospheric Composition Research and Health and Air Quality Applied Sciences Programs and the Texas Commission on Environmental Quality (TCEQ) are collaborating on a joint set of field campaigns to study the interactions of cloud, aerosol, and pollutants within the coastal, urban environment. In the Houston area, onshore flow from the Gulf of Mexico and the associated sea breeze circulation generates numerous isolated convective cells, particularly in the summer months, that interact with a variety of urban and industrial emissions.

54 ENVIRONMENTAL SCIENCES↗

Advancing Marine Arctic Science through Facilitating International Collaborations

The Consortium for the Advancement of Marine Arctic Science (CAMAS) held its inaugural Workshop and Early Career School in Santa Fe, New Mexico, from 13 to 16 February 2024. The event brought together 80 Arctic marine scientists from around the world to discuss current research and to develop ideas for collaborative research projects that can be executed in the next few years to advance our understanding of the marine Arctic system.

54 ENVIRONMENTAL SCIENCES↗

Are North Atlantic Tropical Cyclones Modulated by the Madden–Julian Oscillation in HighResMIP AGCMs?

This study assesses the representation of the observed relationship between Atlantic tropical cyclones (TCs) and the Madden–Julian oscillation (MJO) across nine models participating in CMIP6 High Resolution Model Intercomparison Project (HighResMIP). Most models struggle to faithfully reproduce the observed impacts of the MJO on Atlantic TCs, with the primary issue being the underestimated TC activity over the Atlantic main development region (MDR). The negative biases in genesis frequency within the MDR can be further attributed to weaker-than-observed African easterly wave (AEW) activity south of ∼12°N. Errors in the diabatic heating profile within the Atlantic intertropical convergence zone lead to insufficient potential vorticity production in the lower troposphere and constrain the amplification of AEWs. In addition to the biased TC climatology, the eastward-propagating power of the MJO is consistently underestimated across all models. Nevertheless, in models with a higher eastward–westward power ratio, the simulated MJO demonstrates a stronger capacity to modulate subseasonal TC activity. Models with relatively realistic eastward propagation of the MJO also exhibit greater variance in tropical intraseasonal convection. Stronger contrasts in convective heating over the North Atlantic between phases 2–3 and phases 6–7 drive larger fluctuations in MDR shear and AEW activity over the Gulf of Mexico and West Africa, resulting in a more pronounced TC response to the MJO. Overall, our findings suggest that improved MDR TC climatology and MJO propagation are essential for models to accurately capture the observed modulations of Atlantic TCs by the MJO.

54 ENVIRONMENTAL SCIENCES↗

Future Projection of Tropical Upper-Tropospheric Troughs and Implications for Tropical Cyclone Activity

Summertime tropical upper-tropospheric troughs (TUTTs) provide a unified framework to better understand how extratropical and tropical forcings jointly modulate basin-scale tropical cyclone (TC) activity. In this study, we examine future changes in TUTTs and their implications for TC activity. Multimodel ensemble-mean projections from 45 Coupled Model Intercomparison Project phase 6 (CMIP6) models suggest a contraction of the Pacific TUTT and an expansion of the Atlantic TUTT as the climate warms. Consistently, future changes in environment-based TC indices indicate that the large-scale conditions will become more favorable for TC genesis and intensification over the central North Pacific but less favorable over the tropical North Atlantic and Gulf of Mexico. Utilizing a TC-permitting large-ensemble dataset [i.e., the Database for Policy Decision-Making for Future Climate Change (d4PDF)] that adequately captures the observed interannual TUTT–TC relationships, we further confirm the impacts of projected TUTT changes on the TC activity in a warmer climate. In contrast, the TUTT–TC relationship is poorly represented in most CMIP6 High-Resolution Model Intercomparison Project (HighResMIP) models; such deficiencies call for caution when assessing future TC risk based on explicitly tracked TCs in these models. Additionally, CMIP6 projections show large intermodel spread in TUTT changes, implying uncertainty in projected TC activity, especially over the central-to-eastern Pacific and the North Atlantic. This intermodel spread is associated with interhemispheric sea surface temperature warming asymmetry, which leads to a meridional shift of the intertropical convergence zone (ITCZ) and the simultaneous weakening or strengthening of TUTTs in the North Pacific and North Atlantic. The potential contributions of anthropogenic aerosol forcing and oceanic circulation to this interhemispheric warming asymmetry are briefly examined.

Climate Change↗

Frontal Maintenance in Submesoscale Flows

Classic deformation theory includes parameters—divergence, total strain, and vorticity—that are invariant to changes in the coordinate system. However, these parameters are sometimes ambiguous with respect to characterizing how fronts are formed and maintained because the presence of a front imposes a reference coordinate system. To help remedy this ambiguity, we propose a framework in frontal coordinates based on along- and cross-front velocity gradients to better characterize frontal maintenance, which can also be used to define divergence and normal strain in frontal coordinates. The framework with these four parameters (along-, cross-front velocity gradients, divergence, and normal strain in frontal coordinate) defines eight characteristic flow types at a front, providing a complete characterization of the flow that strengthens or weakens a front. This framework highlights the importance of the “strain efficiency” concept, which unambiguously defines the contribution of total strain to frontogenesis. Two examples, one based on a realistic simulation of submesoscales in the northern Gulf of Mexico and the other based on an idealized model with similar flow characteristics, are provided to demonstrate how this framework can be used to enhance our understanding of frontal dynamics in submesoscale flows.

frontogenesis↗

Intensification of Hurricane Sally (2020) over the Mississippi River Plume

Abstract Tropical Cyclone (TC) Sally formed on 11 September 2020, traveled through the Gulf of Mexico (GMX), and intensified rapidly before making landfall on the Alabama coast as a devastating category-2 TC with extensive coastal and inland flooding. In this study, using a combination of observations and idealized numerical model experiments, we demonstrate that the Mississippi River plume played a key role in the intensification of Sally near the northern Gulf Coast. As the storm intensified and its translation slowed before landfall, sea surface cooling was reduced along its track, coincident with a pronounced increase in SSS. Further analysis reveals that TC Sally encountered a warm Loop Current eddy in the northern GMX close to the Mississippi River plume. Besides deepening the thermocline, the eddy advected low-salinity Mississippi River plume water into the storm’s path. This resulted in the development of strong upper-ocean salinity stratification, with a shallow layer of freshwater lying above a deep, warm “barrier layer.” Consequently, TC-induced mixing and the associated sea surface cooling were reduced, aiding Sally’s intensification. These results suggest that the Mississippi River plume and freshwater advection by the Loop Current eddies can play an important role in TC intensification near the U.S. Gulf Coast.

54 ENVIRONMENTAL SCIENCES↗

The use of nocturnal flights for barrier crossing in a diurnally migrating songbird

The migration patterns of land birds can generally be divided into those species that migrate principally during the day and those that migrate during the night. Some species may show individual plasticity in the use of day or night flight, particularly when crossing large, open-water or desert barriers. However, individual plasticity in circadian patterns of migratory flights in diurnally migrating songbirds has never been investigated. We used high precision GPS tracking of a diurnal, migratory swallow, the purple martin (Progne subis), to determine whether individuals were flexible in their spring migration strategies to include some night flight, particularly at barrier crossing. Most (91%) of individuals made large (sometimes > 1000 km), open-water crossings of the Caribbean Sea and the Gulf of Mexico that included the use of night flight. 32% of all water crossings were initiated at night, demonstrating that night flight is not only used to complete large crossings but may confer other advantages for diurnal birds. Birds were not more likely to initiate crossings with supportive winds, however crossings were more likely when they reduced travel distances. Our results are consistent with diurnal birds using night flight to help achieve time- and energy-savings through ‘short cuts’ at barrier crossings, at times and locations when foraging opportunities are not available. Overall, our results demonstrate the use of nocturnal flight and a high degree of individual plasticity in migration strategies on a circadian scale in a species generally considered to be a diurnal migrant. Nocturnal flights at barrier crossing may provide time and energy savings where foraging opportunities are low in an otherwise diurnal strategy. Future research should target how diel foraging and refueling strategies support nocturnal flights and barrier crossing in this and other diurnal species.

54 ENVIRONMENTAL SCIENCES↗

The ancestral environment of teosinte populations shapes their root microbiome

Summary Background The composition of the root microbiome affects the host’s growth, with variation in the host genome associated with microbiome variation. However, it is not known whether this intra-specific variation of root microbiomes is a consequence of plants performing targeted manipulations of them to adapt to their local environment or varying passively with other traits. To explore the relationship between the genome, environment and microbiome, we sampled seeds from teosinte populations across its native range in Mexico. We then grew teosinte accessions alongside two modern maize lines in a common garden experiment. Metabarcoding was performed using universal bacterial and fungal primers to profile their root microbiomes. Results The root microbiome varied between the two modern maize lines and the teosinte accessions. We further found that variation of the teosinte genome, the ancestral environment (temperature/elevation) and root microbiome were all correlated. Multiple microbial groups significantly varied in relative abundance with temperature/elevation, with an increased abundance of bacteria associated with cold tolerance found in teosinte accessions taken from high elevations. Conclusions Our results suggest that variation in the root microbiome is pre-conditioned by the genome for the local environment (i.e. non-random). Ultimately, these claims would be strengthened by confirming that these differences in the root microbiome impact host phenotype, for example, by confirming that the root microbiomes of high-elevation teosinte populations enhance cold tolerance.

Genetics & Heredity↗

Introduction to special section: Induced seismicity

Induced seismicity refers to earthquakes related to anthropogenic activities such as wastewater disposal, hydraulic fracturing, and geothermal energy production. In Oklahoma, wastewater disposal is considered to have caused more than 100 earthquakes of magnitude 4 and above (M4+) since 2010. Similarly, over 50 such events have been recorded in the Permian Basin of Texas and New Mexico. Additionally, some of these earthquakes have magnitudes exceeding 5.0, including a magnitude 5.8 event in Pawnee, Oklahoma, in a magnitude 5.6 event in the Peace River Oil Sands Area in Alberta, and a magnitude 5.4 event in the Delaware Basin of Texas.

58 GEOSCIENCES↗

Partner with a Third-Party Delivery Service or Not? A Prediction-and-Decision Tool for Restaurants Facing Takeout Demand Surges During a Pandemic

Amidst the COVID-19 pandemic, restaurants become more reliant on no-contact pick-up or delivery ways for serving customers. As a result, they need to make tactical planning decisions such as whether to partner with online platforms, to form their own delivery team, or both. In this paper, we develop an integrated prediction-decision model to analyze the profit of combining the two approaches and to decide the needed number of drivers under stochastic demand. We first use the susceptible-infected-recovered (SIR) model to forecast future infected cases in a given region and then construct an autoregressive-moving-average (ARMA) regression model to predict food-ordering demand. Using predicted demand samples, we formulate a stochastic integer program to optimize food delivery plans. We conduct numerical studies using COVID-19 data and food-ordering demand data collected from local restaurants in Nuevo Leon, Mexico, from April to October 2020, to show results for helping restaurants build contingency plans under rapid market changes. Our method can be used under unexpected demand surges, various infection/vaccination status, and demand patterns. Here, our results show that a restaurant can benefit from partnering with third-party delivery platforms when (i) the subscription fee is low, (ii) customers can flexibly decide whether to order from platforms or from restaurants directly, (iii) customers require more efficient delivery, (iv) average delivery distance is long, or (v) demand variance is high.

97 MATHEMATICS AND COMPUTING↗

Mucilage produced by aerial roots hosts diazotrophs that provide nitrogen in Sorghum bicolor

Sorghum ( Sorghum bicolor ) is an important food, feed, and fodder crop worldwide and is gaining popularity as an energy crop due to its high potential for biomass production. Some sorghum accessions develop many aerial roots and produce an abundant carbohydrate-rich mucilage after rain. This aerial root mucilage is similar to that observed in landraces of maize ( Zea mays ) from southern Mexico, which have been previously shown to host diazotrophs. In this study, we characterized the aerial root development of several sorghum accessions and the impact of humidity on this trait. We conducted a microbiome study of the aerial root mucilage of maize and sorghum and isolated numerous diazotrophs from field sorghum mucilage. We observed that the prevailing phyla in the mucilage were Pseudomonadota, Bacteroidota, and Bacillota. However, bacterial abundances varied based on the genotype and the location. Using acetylene reduction, 15 N 2 gas feeding, and 15 N isotope dilution assays, we confirmed that these sorghum accessions can acquire about 40% of their nitrogen from the atmosphere through these associations on aerial roots. Nitrogen fixation in sorghum aerial root mucilage offers a promising avenue to reduce reliance on synthetic fertilizers and promote sustainable agricultural practices for food, feed, fodder, and bioenergy production.

Venado, Rafael E.↗

Comparing variability in diagnosis of upper respiratory tract infections in patients using syndromic, next generation sequencing, and PCR-based methods

Early and accurate diagnosis of respiratory pathogens and associated outbreaks can allow for the control of spread, epidemiological modeling, targeted treatment, and decision making–as is evident with the current COVID-19 pandemic. Many respiratory infections share common symptoms, making them difficult to diagnose using only syndromic presentation. Yet, with delays in getting reference laboratory tests and limited availability and poor sensitivity of point-of-care tests, syndromic diagnosis is the most-relied upon method in clinical practice today. Here, we examine the variability in diagnostic identification of respiratory infections during the annual infection cycle in northern New Mexico, by comparing syndromic diagnostics with polymerase chain reaction (PCR) and sequencing-based methods, with the goal of assessing gaps in our current ability to identify respiratory pathogens. Of 97 individuals that presented with symptoms of respiratory infection, only 23 were positive for at least one RNA virus, as confirmed by sequencing. Whereas influenza virus (n = 7) was expected during this infection cycle, we also observed coronavirus (n = 7), respiratory syncytial virus (n = 8), parainfluenza virus (n = 4), and human metapneumovirus (n = 1) in individuals with respiratory infection symptoms. Four patients were coinfected with two viruses. In 21 individuals that tested positive using PCR, RNA sequencing completely matched in only 12 (57%) of these individuals. Few individuals (37.1%) were diagnosed to have an upper respiratory tract infection or viral syndrome by syndromic diagnostics, and the type of virus could only be distinguished in one patient. Thus, current syndromic diagnostic approaches fail to accurately identify respiratory pathogens associated with infection and are not suited to capture emerging threats in an accurate fashion. We conclude there is a critical and urgent need for layered agnostic diagnostics to track known and unknown pathogens at the point of care to control future outbreaks.

60 APPLIED LIFE SCIENCES↗