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At least 865 records · Page 48

Visualizing large data sets in the earth sciences

The authors describe the capabilities of McIDAS, an interactive visualization system that is vastly increasing the ability of earth scientists to manage and analyze data from remote sensing instruments and numerical simulation models. McIDAS provides animated three-dimensionsal images and highly interactive displays. The software can manage, analyze, and visualize large data sets that span many physical variables (such as temperature, pressure, humidity, and wind speed), as well as time and three spatial dimensions. The McIDAS system manages data from at least 100 different sources. The data management tools consist of data structures for storing different data types in files, libraries of routines for accessing these data structures, system commands for performing housekeeping functions on the data files, and reformatting programs for converting external data to the system's data structures. The McIDAS tools for three-dimensional visualization of meteorological data run on an IBM mainframe and can load up to 128-frame animation sequences into the workstations. A highly interactive version of the system can provide an interactive window into data sets containing tens of millions of points produced by numerical models and remote sensing instruments. The visualizations are being used for teaching as well as by scientists.

Hibbard, William↗

Application of High-Dimensional Fuzzy K-Means Cluster Analysis to CALIOP/CALIPSO Version 4.1 Cloud-Aerosol Discrimination

This study applies fuzzy k-means (FKM) cluster analyses to a subset of the parameters reported in the CALIPSO lidar level 2 data products in order to classify the layers detected as either clouds or aerosols. The results obtained are used to assess the reliability of the cloud–aerosol discrimination (CAD) scores reported in the version 4.1 release of the CALIPSO data products. FKM is an unsupervised learning algorithm, whereas the CALIPSO operational CAD algorithm (COCA) takes a highly supervised approach. Despite these substantial computational and architectural differences, our statistical analyses show that the FKM classifications agree with the COCA classifications for more than 94 % of the cases in the troposphere. This high degree of similarity is achieved because the lidar-measured signatures of the majority of the clouds and the aerosols are naturally distinct, and hence objective methods can independently and effectively separate the two classes in most cases. Classification differences most often occur in complex scenes (e.g., evaporating water cloud filaments embedded in dense aerosol) or when observing diffuse features that occur only intermittently (e.g., volcanic ash in the tropical tropopause layer). The two methods examined in this study establish overall classification correctness boundaries due to their differing algorithm uncertainties. In addition to comparing the outputs from the two algorithms, analysis of sampling, data training, performance measurements, fuzzy linear discriminants, defuzzification, error propagation, and key parameters in feature type discrimination with the FKM method are further discussed in order to better understand the utility and limits of the application of clustering algorithms to space lidar measurements. In general, we find that both FKM and COCA classification uncertainties are only minimally affected by noise in the CALIPSO measurements, though both algorithms can be challenged by especially complex scenes containing mixtures of discrete layer types. Our analysis results show that attenuated backscatter and color ratio are the driving factors that separate water clouds from aerosols; backscatter intensity, depolarization, and mid-layer altitude are most useful in discriminating between aerosols and ice clouds; and the joint distribution of backscatter intensity and depolarization ratio is critically important for distinguishing ice clouds from water clouds.

Zeng, Shan↗

Radio emission and orbital motion from the close-encounter star–brown dwarf binary WISE J072003.20–084651.2

We report the detection of radio emission and orbital motion from the nearby star–brown dwarf binary WISE J072003.20–084651.2AB. Radio observations across the 4.5–6.5 GHz band with the Very Large Array identify at the position of the system quiescent emission with a flux density of 15 ± 3 μJy, and a highly polarized radio source that underwent a 2–3 minute burst with peak flux density 300 ± 90 μJy. The latter emission is likely a low-level magnetic flare similar to optical flares previously observed for this source. No outbursts were detected in separate narrow-band Hα monitoring observations. We report new high-resolution imaging and spectroscopic observations that confirm the presence of a co-moving T5.5 secondary and provide the first indications of three-dimensional orbital motion. We used these data to revise our estimates for the orbital period (4.1{sub −1.3}{sup +2.7} year) and tightly constrain the orbital inclination to be nearly edge-on (93.°6{sup +1.°6}{sub −1.°4}), although robust measures of the component and system masses will require further monitoring. The inferred orbital motion does not change the high likelihood that this radio-emitting very low-mass binary made a close pass to the Sun in the past 100 kyr.

79 ASTRONOMY AND ASTROPHYSICS↗

MONTI: A Multi-Omics Non-negative Tensor Decomposition Framework for Gene-Level Integrative Analysis

Multi-omics data is frequently measured to enrich the comprehension of biological mechanisms underlying certain phenotypes. However, due to the complex relations and high dimension of multi-omics data, it is difficult to associate omics features to certain biological traits of interest. For example, the clinically valuable breast cancer subtypes are well-defined at the molecular level, but are poorly classified using gene expression data. Here, we propose a multi-omics analysis method called MONTI (Multi-Omics Non-negative Tensor decomposition for Integrative analysis), which goal is to select multi-omics features that are able to represent trait specific characteristics. Here, we demonstrate the strength of multi-omics integrated analysis in terms of cancer subtyping. The multi-omics data are first integrated in a biologically meaningful manner to form a three dimensional tensor, which is then decomposed using a non-negative tensor decomposition method. From the result, MONTI selects highly informative subtype specific multi-omics features. MONTI was applied to three case studies of 597 breast cancer, 314 colon cancer, and 305 stomach cancer cohorts. For all the case studies, we found that the subtype classification accuracy significantly improved when utilizing all available multi-omics data. MONTI was able to detect subtype specific gene sets that showed to be strongly regulated by certain omics, from which correlation between omics types could be inferred. Furthermore, various clinical attributes of nine cancer types were analyzed using MONTI, which showed that some clinical attributes could be well explained using multi-omics data. We demonstrated that integrating multi-omics data in a gene centric manner improves detecting cancer subtype specific features and other clinical features, which may be used to further understand the molecular characteristics of interest. The software and data used in this study are available at: https://github.com/inukj/MONTI.

59 BASIC BIOLOGICAL SCIENCES↗

CFD predictions of near-field pressure signatures of a low-boom aircraft

A three dimensional Euler marching code has been utilized to predict near-field pressure signatures of an aircraft with low boom characteristics. Computations were extended to approximately six body lengths aft of the aircraft in order to obtain pressure data at three body lengths below the aircraft for a cruise Mach number of 1.6. The near-field pressure data were extrapolated to the ground using a Whitham based method. The distance below the aircraft where the pressure data are attained is defined in this paper as the 'separation distance.' The influences of separation distances and the still highly three-dimensional flow field on the predicted ground pressure signatures and boom loudness are presented in this paper.

Fouladi, Kamran↗

Numerical Benchmark for High-Reynolds-Number Supercritical Flows with Large Density Gradients

Because of the extreme complexity of physical phenomena at high pressure, only limited data are available for solver validation at device-relevant conditions such as liquid rocket engines, gas turbines, or diesel engines. In the present study, a two-dimensional direct numerical simulation is used to establish a benchmark for supercritical flow at a high Reynolds number and high-density ratio at conditions typically encountered in liquid rocket engines. Emphasis has been placed on maintaining the flow characteristics of actual systems with simple boundary conditions, grid spacing, and geometry. Results from two different state-of-the-art codes, with markedly different numerical formalisms, are compared using this benchmark. The strong similarity between the two numerical predictions lends confidence to the physical accuracy of the results. The established database can be used for solver benchmarking and model development at conditions relevant to many propulsion and power systems.

Engineering↗

Global Velocities from VLBI

Precise geodetic Very Long Baseline Interferometry (VLBI) measurements have been made since 1979 at about 130 points on all major tectonic plates, including stable interiors and deformation zones. From the data set of about 2900 observing sessions and about 2.3 million observations, useful three-dimensional velocities can be derived for about 80 sites using an incremental least-squares adjustment of terrestrial, celestial, Earth rotation and site/session-specific parameters. The long history and high precision of the data yield formal errors for horizontal velocity as low as 0.1 mm/yr, but the limitation on the interpretation of individual site velocities is the tie to the terrestrial reference frame. Our studies indicate that the effect of converting precise relative VLBI velocities to individual site velocities is an error floor of about 0.4 mm/yr. Most VLBI horizontal velocities in stable plate interiors agree with the NUVEL-1A model, but there are significant departures in Africa and the Pacific. Vertical precision is worse by a factor of 2-3, and there are significant non-zero values that can be interpreted as post-glacial rebound, regional effects, and local disturbances.

Ma, Chopo↗

Efficient GPU-Accelerated MultiSource Global Fit Pipeline for LISA Data Analysis

The large-scale analysis task of deciphering gravitational-wave signals in the LISA data stream will be difficult, requiring a large amount of computational resources and extensive development of computational methods. Its high dimensionality, multiple model types, and complicated noise profile require a global fit to all parameters and input models simultaneously. In this work, we detail our global fit algorithm, called “Erebor,” designed to accomplish this challenging task. It is capable of analyzing current state-of-the-art datasets and then growing into the future as more pieces of the pipeline are completed and added. We describe our pipeline strategy, the algorithmic setup, and the results from our analysis of the LDC2A Sangria dataset, which contains massive black hole binaries, compact galactic binaries, and a parametrized noise spectrum whose parameters are unknown to the user. The Erebor algorithm includes three unique and very useful contributions: GPU acceleration for enhanced computational efficiency; ensemble Markov Chain Monte Carlo (MCMC) sampling with multiple MCMC walkers per temperature for better mixing and parallelized sample creation; and special online updates to reversible-jump (or transdimensional) sampling distributions to ensure sampler mixing and accurate initial estimates for detectable sources in the data.We recover posterior distributions for all 15 (6) of the injected massive black hole binaries (MBHB) in the LDC2A training (hidden) dataset. We catalog ∼12000 galactic binaries (∼8000 as high confidence detections) for both the training and hidden datasets. All of the sources and their posterior distributions are provided in publicly available catalogs.

LISA↗

Experimental and Numerical Investigation of Air Radiation in Superorbital Expanding Flow

To investigate air radiation in expanding flows and provide experimental data for validating associated computational models, experiments were conducted in the X2 expansion tunnel facility at the Centre for Hypersonics of the University of Queensland. A 54 turning angle wedge model was employed to generate steady expanding flows with in flow total enthalpies of 50.7, 63.4 and 75.4 MJkg. VUV spectra from 118 to 180 nm were acquired across the wedge at three equispaced distances away from the top of the model, as well as through its top surface. High speed filtered images were also obtained by coupling a Shimadzu 1 MHz high speed camera to a bandpass filter to obtain calibrated images of the 777 nm oxygen triplet. Both the across-wedge VUV spectra and filtered images of the 777 nm atomic oxygen were compared with NEQAIR simulations, which were performed using flow field data from two-dimensional CFD simulations with two-temperature 11-species air chemistry utilizing the in-house Navier-Stokes flow solver Eilmer3. Data extracted from consecutive frames of the filtered high speed images confirmed up to 8 s of available test time for the flow conditions tested. For the strongly radiating 149 and 174 nm atomic nitrogen lines, large disagreement between experimental data and NEQAIR predictions can be observed from the start of the expansion fan where the electron-ion recombination process commences. The spatial extent, or spans of the radiance profiles of the 149 and 174 nm N lines are significantly under predicted by NEQAIR, and are very close to those of N, N+ and electron number density profiles, which follow that of flow density. The electron-ion recombination process is proposed as the main reason for these discrepancies. The comparisons between NEQAIR simulations and filtered images of the 777 nm oxygen triplet show good agreement in the post-shock compression region and the start of the expansion fan for the 63.4 MJkg condition, but with up to a factor of three over prediction by NEQAIR further downstream, which is attributed to electron-impact excitation. Similar trends are found with the 75.4 MJkg condition, with reduced level of agreement in the compression region, which can be due to uncertainties in inflow condition.

Earth entry↗

Experimental and Numerical Investigation of Air Radiation in Superorbital Expanding Flow

To investigate air radiation in expanding flows and provide experimental data for validating associated computational models, experiments were conducted in the X2 expansion tunnel facility at the Centre for Hypersonics of the University of Queensland. A 54deg turning angle wedge model was employed to generate steady expanding flows with in flow total enthalpies of 50.7, 63.4 and 75.4 MJ/kg. VUV spectra from 118 to 180 nm were acquired across the wedge at three equispaced distances away from the top of the model, as well as through its top surface. High speed filtered images were also obtained by coupling a Shimadzu 1 MHz high speed camera to a bandpass filter to obtain calibrated images of the 777 nm oxygen triplet. Both the across-wedge VUV spectra and filtered images of the 777 nm atomic oxygen were compared with NEQAIR simulations, which were performed using flow field data from two-dimensional CFD simulations with two-temperature 11-species air chemistry utilising the in-house Navier-Stokes flow solver Eilmer3. Data extracted from consecutive frames of the filtered high speed images confirmed up to 8 s of available test time for the flow conditions tested. For the strongly radiating 149 and 174 nm atomic nitrogen lines, large disagreement between experimental data and NEQAIR predictions can be observed from the start of the expansion fan where the electron-ion recombination process commences. The spatial extent, or spans of the radiance profiles of the 149 and 174 nm N lines are significantly underpredicted by NEQAIR, and are very close to those of N, N+ and electron number density profiles, which follow that of flow density. The electron-ion recombination process is proposed as the main reason for these discrepancies. The comparisons between NEQAIR simulations and filtered images of the 777 nm oxygen triplet show good agreement in the post-shock compression region and the start of the expansion fan for the 63.4 MJ/kg condition, but with up to a factor of three overprediction by NEQAIR further downstream, which is attributed to electron-impact excitation. Similar trends are found with the 75.4 MJ/kg condition, with reduced level of agreement in the compression region, which can be due to uncertainties in inflow condition.

expansion tube↗

Mapping strain fields induced in Zr-based bulk metallic glasses during in-situ nanoindentation by X-ray nanodiffraction

A pioneer in-situ synchrotron X-ray nanodiffraction approach for characterization and visualization of strain fields induced by nanoindentation in amorphous materials is introduced. In-situ nanoindentation experiments were performed in transmission mode using a monochromatic and highly focused sub-micron X-ray beam on 40 μm thick Zr-based bulk metallic glass under two loading conditions. Spatially resolved X-ray diffraction scans in the deformed volume of Zr-based bulk metallic glass covering an area of 40 × 40 μm{sup 2} beneath the pyramidal indenter revealed two-dimensional map of elastic strains. The largest value of compressive elastic strain calculated from diffraction data at 1 N load was −0.65%. The region of high elastic compressive strains (<−0.3%) is located beneath the indenter tip and has radius of 7 μm.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Calculation and Correlation of the Unsteady Flowfield in a High Pressure Turbine

Forced vibrations in turbomachinery components can cause blades to crack or fail due to high-cycle fatigue. Such forced response problems will become more pronounced in newer engines with higher pressure ratios and smaller axial gap between blade rows. An accurate numerical prediction of the unsteady aerodynamics phenomena that cause resonant forced vibrations is increasingly important to designers. Validation of the computational fluid dynamics (CFD) codes used to model the unsteady aerodynamic excitations is necessary before these codes can be used with confidence. Recently published benchmark data, including unsteady pressures and vibratory strains, for a high-pressure turbine stage makes such code validation possible. In the present work, a three dimensional, unsteady, multi blade-row, Reynolds-Averaged Navier Stokes code is applied to a turbine stage that was recently tested in a short duration test facility. Two configurations with three operating conditions corresponding to modes 2, 3, and 4 crossings on the Campbell diagram are analyzed. Unsteady pressures on the rotor surface are compared with data.

Bakhle, Milind A.↗

End-wall boundary layer measurements in a two-stage fan

Detailed flow measurements made in the casing boundary layer of a two-stage transonic fan are summarized. These measurements were taken at a station upstream of the fan, between all blade rows, and downstream of the last row. Conventional boundary layer parameters were calculated from the measured data. A classical two dimensional casing boundary layer was measured at the fan inlet and extended inward to approximately 15 percent of span. A highly three dimensional boundary layer was measured at the exit of each blade row and extended inward to approximately 10 percent of span. The steep radial gradient of axial velocity noted at the exit of the rotors was reduced substantially as the flow passed through the stators. This reduced gradient is attributed to flow mixing. The amount of flow mixing was reflected in the radial redistribution of total temperature as the flow passed through the stators. The blockage factors calculated from the measured data show an increase in blockage across the rotors and a decrease across the stators. For this fan the calculated blockages for the second stage were essentially the same as those for the first stage.

Ball, C. L.↗

Long-range 3D imaging of highly dynamic objects using the intensity ratios of partial beams of reflected laser light

The procedural aspects of obtaining long-range three-dimensional images of highly dynamic objects using the ratios of partial beam intensities of the reflected laser light are considered. Alongside with the object images, the proposed method simultaneously provides the data on the object relief with high resolution on a set of surface points during a single-pulse location cycle. The high resolving power and speed of the method ensure the efficiency of its application to detecting and recognition of remote highly dynamic objects, including low-dimensional ones, by their 3D characteristics. (paper)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Assembly and Delivery of Rabbit Capsules for Irradiation of Reinforced Radiation Resistant SiC-SiC Composites in the High Flux Isotope Reactor

The development of reinforced radiation resistant composites presents a critical challenge for in-vessel component application in advanced high temperature reactors. In its pursuit of this, Physical Optics Corporation (POC) is interested in developing a silicon carbide (SiC)-based ceramic matrix composite (CMC) with improved thermal conductivity in a high neutron radiation environment. The US Department of Energy (DOE) is supporting research efforts to develop Advanced Reactor Technology. Ultimately, the results of this project will determine the viability of using SiC matrix composites in hot structures in advanced high temperature reactors. The first objective of this project is to irradiate torsion and bend bar specimens in the High Flux Isotope Reactor (HFIR) and develop an initial data set to evaluate the evolution of composite mechanical strength, dimensional changes, and thermal conductivity. This report briefly describes the irradiation experiment design concepts, summarizes the irradiation test matrix, and reports on the successful delivery of three rabbit capsules to the HFIR. Rabbits of both torsion and bend bar configurations have been assembled, welded, evaluated, and delivered to the HFIR along with a complete quality assurance fabrication package.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Improved Acquisition and Reconstruction for Wavelength-Resolved Neutron Tomography

Wavelength-resolved neutron tomography (WRNT) is an emerging technique for characterizing samples relevant to the materials sciences in 3D. WRNT studies can be carried out at beam lines in spallation neutron or reactor-based user facilities. Because of the limited availability of experimental time, potential imperfections in the neutron source, or constraints placed on the acquisition time by the type of sample, the data can be extremely noisy resulting in tomographic reconstructions with significant artifacts when standard reconstruction algorithms are used. Furthermore, making a full tomographic measurement even with a low signal-to-noise ratio can take several days, resulting in a long wait time before the user can receive feedback from the experiment when traditional acquisition protocols are used. In this paper, we propose an interlaced scanning technique and combine it with a model-based image reconstruction algorithm to produce high-quality WRNT reconstructions concurrent with the measurements being made. The interlaced scan is designed to acquire data so that successive measurements are more diverse in contrast to typical sequential scanning protocols. The model-based reconstruction algorithm combines a data-fidelity term with a regularization term to formulate the wavelength-resolved reconstruction as minimizing a high-dimensional cost-function. Using an experimental dataset of a magnetite sample acquired over a span of about two days, we demonstrate that our technique can produce high-quality reconstructions even during the experiment compared to traditional acquisition and reconstruction techniques. In summary, the combination of the proposed acquisition strategy with an advanced reconstruction algorithm provides a novel guideline for designing WRNT systems at user facilities.

47 OTHER INSTRUMENTATION↗

The transonic multi-foil Augmentor-Wing

The paper describes the development of a transonic blown multi-foil Augmentor-Wing airfoil section that has a thickness/chord (t/c) value of 0.18. In comparison with an unblown single-foil supercritical section of the same overall t/c the new multi-foil section is characterized by an increased drag rise Mach number, increased buffet boundaries, and a reduction in 'effective' drag due to blowing. Potential advantages of the Augmentor-Wing are considered and the testing of three high-speed models in a trisonic pressurized wind tunnel (possessing a two-dimensional transonic insert) is discussed. The data indicate that a very thick wing is feasible since separations toward the rear of the main foil can be controlled both by shroud location and augmentor blowing.

Farbridge, J. E.↗

Two dimensional convolute integers for machine vision and image recognition

Machine vision and image recognition require sophisticated image processing prior to the application of Artificial Intelligence. Two Dimensional Convolute Integer Technology is an innovative mathematical approach for addressing machine vision and image recognition. This new technology generates a family of digital operators for addressing optical images and related two dimensional data sets. The operators are regression generated, integer valued, zero phase shifting, convoluting, frequency sensitive, two dimensional low pass, high pass and band pass filters that are mathematically equivalent to surface fitted partial derivatives. These operators are applied non-recursively either as classical convolutions (replacement point values), interstitial point generators (bandwidth broadening or resolution enhancement), or as missing value calculators (compensation for dead array element values). These operators show frequency sensitive feature selection scale invariant properties. Such tasks as boundary/edge enhancement and noise or small size pixel disturbance removal can readily be accomplished. For feature selection tight band pass operators are essential. Results from test cases are given.

Edwards, Thomas R.↗