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At least 865 records · Page 48

Quantum computing for fusion energy science applications

This is a review of recent research exploring and extending present-day quantum computing capabilities for fusion energy science applications. We begin with a brief tutorial on both ideal and open quantum dynamics, universal quantum computation, and quantum algorithms. Then, we explore the topic of using quantum computers to simulate both linear and nonlinear dynamics in greater detail. Because quantum computers can only efficiently perform linear operations on the quantum state, it is challenging to perform nonlinear operations that are generically required to describe the nonlinear differential equations of interest. In this work, we extend previous results on embedding nonlinear systems within linear systems by explicitly deriving the connection between the Koopman evolution operator, the Perron–Frobenius evolution operator, and the Koopman–von Neumann evolution (KvN) operator. We also explicitly derive the connection between the Koopman and Carleman approaches to embedding. Extension of the KvN framework to the complex-analytic setting relevant to Carleman embedding, and the proof that different choices of complex analytic reproducing kernel Hilbert spaces depend on the choice of Hilbert space metric are covered in the appendixes. Finally, we conclude with a review of recent quantum hardware implementations of algorithms on present-day quantum hardware platforms that may one day be accelerated through Hamiltonian simulation. We discuss the simulation of toy models of wave–particle interactions through the simulation of quantum maps and of wave–wave interactions important in nonlinear plasma dynamics.

Joseph, I. (ORCID:0000000255400840)↗

Analysis of EDP performance

The objective of this contract was the investigation of the potential performance gains that would result from an upgrade of the Space Station Freedom (SSF) Data Management System (DMS) Embedded Data Processor (EDP) '386' design with the Intel Pentium (registered trade-mark of Intel Corp.) '586' microprocessor. The Pentium ('586') is the latest member of the industry standard Intel X86 family of CISC (Complex Instruction Set Computer) microprocessors. This contract was scheduled to run in parallel with an internal IBM Federal Systems Company (FSC) Internal Research and Development (IR&D) task that had the goal to generate a baseline flight design for an upgraded EDP using the Pentium. This final report summarizes the activities performed in support of Contract NAS2-13758. Our plan was to baseline performance analyses and measurements on the latest state-of-the-art commercially available Pentium processor, representative of the proposed space station design, and then phase to an IBM capital funded breadboard version of the flight design (if available from IR&D and Space Station work) for additional evaluation of results. Unfortunately, the phase-over to the flight design breadboard did not take place, since the IBM Data Management System (DMS) for the Space Station Freedom was terminated by NASA before the referenced capital funded EDP breadboard could be completed. The baseline performance analyses and measurements, however, were successfully completed, as planned, on the commercial Pentium hardware. The results of those analyses, evaluations, and measurements are presented in this final report.

Source record↗

Mineral and organic matrix interaction in normally calcifying tendon visualized in three dimensions by high-voltage electron microscopic tomography and graphic image reconstruction

To define the ultrastructural accommodation of mineral crystals by collagen fibrils and other organic matrix components during vertebrate calcification, electron microscopic 3-D reconstructions were generated from the normally mineralizing leg tendons from the domestic turkey, Meleagris gallopavo. Embedded specimens containing initial collagen mineralizing sites were cut into 0.5-micron-thick sections and viewed and photographed at 1.0 MV in the Albany AEI-EM7 high-voltage electron microscope. Tomographic 3-D reconstructions were computed from a 2 degree tilt series of micrographs taken over a minimum angular range of +/- 60 degrees. Reconstructions of longitudinal tendon profiles confirm the presence of irregularly shaped mineral platelets, whose crystallographic c-axes are oriented generally parallel to one another and directed along the collagen long axes. The reconstructions also corroborate observations of a variable crystal length (up to 170 nm measured along crystallographic c-axes), the presence of crystals initially in either the hole or overlap zones of collagen, and crystal growth in the c-axis direction beyond these zones into adjacent overlap and other hole regions. Tomography shows for the first time that crystal width varies (30-45 nm) but crystal thickness is uniform (approximately 4-6 nm at the resolution limit of tomography); more crystals are located in the collagen hole zones than in the overlap regions at the earliest stages of tendon mineralization; the crystallographic c-axes of the platelets lie within +/- 15-20 degrees of one another rather than being perfectly parallel; adjacent platelets are spatially separated by a minimum of 4.2 +/- 1.0 nm; crystals apparently fuse in coplanar alignment to form larger platelets; development of crystals in width occurs to dimensions beyond single collagen hole zones; and a thin envelope of organic origin may be present along or just beneath the surfaces of individual mineral platelets. Implicit in the results is that the formation of crystals occurs at different sites and times by independent nucleation events in local regions of collagen. These data provide the first direct visual evidence from 3-D imaging describing the size, shape, orientation, and growth of mineral crystals in association with collagen of a normally mineralizing vertebrate tissue. They support concepts that c-axial crystal growth is unhindered by collage hole zone dimensions, that crystals are organized in the tendon in a series of generally parallel platelets, and that crystal growth in width across collagen fibrils may follow channels or grooves formed by adjacent hole zones in register.

Non-NASA Center↗

Evaluation of a Cloud Resolving Model Using TRMM Observations for Multiscale Modeling Applications

The climate change simulation community is moving toward use of global cloud resolving models (CRMs), however, current computational resources are not sufficient to run global CRMs over the hundreds of years necessary to produce climate change estimates. As an intermediate step between conventional general circulation models (GCMs) and global CRMs, many climate analysis centers are embedding a CRM in each grid cell of a conventional GCM. These Multiscale Modeling Frameworks (MMFs) represent a theoretical advance over the use of conventional GCM cloud and convection parameterizations, but have been shown to exhibit an overproduction of precipitation in the tropics during the northern hemisphere summer. In this study, simulations of clouds, precipitation, and radiation over the South China Sea using the CRM component of the NASA Goddard MMF are evaluated using retrievals derived from the instruments aboard the Tropical Rainfall Measuring Mission (TRMM) satellite platform for a 46-day time period that spans 5 May - 20 June 1998. The NASA Goddard Cumulus Ensemble (GCE) model is forced with observed largescale forcing derived from soundings taken during the intensive observing period of the South China Sea Monsoon Experiment. It is found that the GCE configuration used in the NASA Goddard MMF responds too vigorously to the imposed large-scale forcing, accumulating too much moisture and producing too much cloud cover during convective phases, and overdrying the atmosphere and suppressing clouds during monsoon break periods. Sensitivity experiments reveal that changes to ice cloud microphysical parameters have a relatively large effect on simulated clouds, precipitation, and radiation, while changes to grid spacing and domain length have little effect on simulation results. The results motivate a more detailed and quantitative exploration of the sources and magnitude of the uncertainty associated with specified cloud microphysical parameters in the CRM components of MMFs.

Posselt, Derek J.↗

Numerical Simulation of a High-Lift Configuration with Embedded Fluidic Actuators

Numerical simulations have been performed for a vertical tail configuration with deflected rudder. The suction surface of the main element of this configuration is embedded with an array of 32 fluidic actuators that produce oscillating sweeping jets. Such oscillating jets have been found to be very effective for flow control applications in the past. In the current paper, a high-fidelity computational fluid dynamics (CFD) code known as the PowerFLOW(Registered TradeMark) code is used to simulate the entire flow field associated with this configuration, including the flow inside the actuators. The computed results for the surface pressure and integrated forces compare favorably with measured data. In addition, numerical solutions predict the correct trends in forces with active flow control compared to the no control case. Effect of varying yaw and rudder deflection angles are also presented. In addition, computations have been performed at a higher Reynolds number to assess the performance of fluidic actuators at flight conditions.

Vatsa, Veer N.↗

Numerical Simulation of a High-Lift Configuration Embedded with High Momentum Fluidic Actuators

Numerical simulations have been performed for a vertical tail configuration with deflected rudder. The suction surface of the main element of this configuration, just upstream of the hinge line, is embedded with an array of 32 fluidic actuators that produce oscillating sweeping jets. Such oscillating jets have been found to be very effective for flow control applications in the past. In the current paper, a high-fidelity computational fluid dynamics (CFD) code known as the PowerFLOW R code is used to simulate the entire flow field associated with this configuration, including the flow inside the actuators. A fully compressible version of the PowerFLOW R code valid for high speed flows is used for the present simulations to accurately represent the transonic flow regimes encountered in the flow field due to the actuators operating at higher mass flow (momentum) rates required to mitigate reverse flow regions on a highly-deflected rudder surface. The computed results for the surface pressure and integrated forces compare favorably with measured data. In addition, numerical solutions predict the correct trends in forces with active flow control compared to the no control case. The effect of varying the rudder deflection angle on integrated forces and surface pressures is also presented.

Vatsa, Veer N.↗

Visualizing and analyzing 3D biomolecular structures using Mol* at RCSB.org: Influenza A H5N1 virus proteome case study

The easiest and often most useful way to work with experimentally determined or computationally predicted structures of biomolecules is by viewing their three-dimensional (3D) shapes using a molecular visualization tool. Mol* was collaboratively developed by RCSB Protein Data Bank (RCSB PDB, RCSB.org) and Protein Data Bank in Europe (PDBe, PDBe.org) as an open-source, web-based, 3D visualization software suite for examination and analyses of biostructures. It is capable of displaying atomic coordinates and related experimental data of biomolecular structures together with a variety of annotations, facilitating basic and applied research, training, education, and information dissemination. Across RCSB.org, the RCSB PDB research-focused web portal, Mol* has been implemented to support single-mouse-click atomic-level visualization of biomolecules (e.g., proteins, nucleic acids, carbohydrates) with bound cofactors, small-molecule ligands, ions, water molecules, or other macromolecules. RCSB.org Mol* can seamlessly display 3D structures from various sources, allowing structure interrogation, superimposition, and comparison. Using influenza A H5N1 virus as a topical case study of an important pathogen, we exemplify how Mol* has been embedded within various RCSB.org tools—allowing users to view polymer sequence and structure-based annotations integrated from trusted bioinformatics data resources, assess patterns and trends in groups of structures, and view structures of any size and compositional complexity. In addition to being linked to every experimentally determined biostructure and Computed Structure Model made available at RCSB.org, Standalone Mol* is freely available for visualizing any atomic-level or multi-scale biostructure at rcsb.org/3d-view.

3D biostructure↗

Application of an Embedded Fracture and Borehole Modeling Approach to the Understanding of EGS Collab Experiment 1

EGS Collab is a series of meso-scale experiments and associated numerical simulation activities being funded by the United States Department of Energy, Geothermal Technologies Office (GTO) to investigate enhanced geothermal system processes under in-situ stress and slightly elevated temperature conditions. This project is designed to provide scientists and engineers with immediate access to impermeable rock at scales larger than possible in the laboratory, but generally smaller than those for commercial production. Immediate access to rock is provided via the existing drifts of the former Homestake Gold Mine, now operated as the Sanford Underground Research Facility in Lead, South Dakota. The objectives of the EGS Collab project are to develop well controlled fracture networks between injector and producer boreholes using normal and shear stimulation for permeability enhancement. The first experimental site was located off the West Access drift on the 4850 Level (4850 feet below ground surface) in phyllite of the Precambrian Poorman formation, and involved the creation of a fracture network comprising a combination of hydraulic and natural fractures. A second experimental site is now being considered near the battery alcove on the 4100 Level in amphibolite and rhyolite of the Yates Unit. Data generated during these experiments will be compared against predictions of a suite of computer codes specifically designed to solve problems involving coupled thermal, hydrological, geomechanical, and geochemical processes. Comparisons between experimental and numerical simulation results will provide code developers with direction for improvements and verification of process models, build confidence in the suite of available numerical tools, and ultimately identify critical future development needs for the geothermal modeling community. Moreover, conducting thorough comparisons of models, modelling approaches, measurement approaches and measured data, via the EGS Collab project, will serve to identify techniques that are most likely to succeed at the Frontier Observatory for Research in Geothermal Energy (FORGE), the GTO’s flagship EGS research effort. Experiment 1 has comprised a series of successful tests, including a long-term chilled-water circulation test, but the testbed has two atypical EGS elements. Active ventilation in the adjacent drift over a 50-year period cooled the testbed rock mass and hydraulic fracturing intersected monitoring boreholes making them conduits for fluid flow. Numerical simulations executed in support of the design of the EGS Collab Experiment 1, computed a radial temperature distribution and stress gradient orthogonal to the drift axis, resulting in the forecast of an oblong hydraulic fracture geometry, extended in the direction of the drift from the stimulation borehole. This paper describes the numerical simulation of long-term chilled-water circulation test with an embedded fracture and borehole modeling approach. The principal objective of the simulation work is show agreement between experimental observations in terms of production fluid temperatures, monitoring borehole temperatures, injection and production pressures, and tracer recoveries using a single conceptual model for the fracture network, using characterization and monitoring data generally available for EGS. A secondary objective is to improve the numerical simulation result comparisons with additional data available from the broader monitoring equipment within the testbed versus deeper, hotter, and more remote EGS. One complicating factor for comparisons between the numerical simulation results and experimental observations, is the Joule-Thomson heating associated with large pressure drops across the fracture network.

numerical simulation, embedded fractures and boreh↗

Modeling low cycle fatigue (LCF) of additively manufactured Hastelloy X using An accelerated crystal plasticity fatigue damage model

This paper presents a microstructure-based model for low cycle fatigue (LCF) behavior and life of Nickel-based alloy Hastelloy X manufactured using laser-powder bed fusion (L-PBF) additive manufacturing (AM). AM Hastelloy X, a solution-strengthened alloy, is tested at elevated temperature under fully reversed LCF conditions at different strain levels. A generalized plane strain finite element model is generated from electron backscatter diffraction (EBSD) characterization. The constitutive behavior of the material under fatigue is modeled using crystal plasticity and calibrated with both monotonic tensile and cyclic stress–strain data. The fatigue micro-crack initiation and propagation in the microstructure is modeled using a modified Chaboche fatigue damage model. An embedded boundary condition with a homogenous medium is used to apply the cyclic deformation and prevent numerically introduced over-constraints during fatigue simulation. A ‘cycle-jump’ method is used to accelerate the fatigue simulation and reduce the computational cost. The simulation results are compared to LCF experiments, showing satisfactory matches in cyclic stress behavior and number of cycles to macro-crack initiation for all applied strain ranges. In addition, the model illustrates the potential for quantifying microscale fatigue life impacting factors such as microstructure and surface roughness, which is needed to accurately quantify the reliability of AM components in service.

36 MATERIALS SCIENCE↗

A Deep Learning Pipeline for Optimizing Large-scale Phase Field Simulations

Phase field (PF) simulations are computationally expensive but remain a key analysis tool to understand the complex mechanisms of additive manufacturing (AM) processes. Each PF simulation-aided analysis requires thousands of node hours on leadership-class supercomputers. One of the main goals of these analyses is the study of microstructure evolution during the build process which begins with the onset of nucleation. Nucleation occurs under certain thermomechanical conditions which are not known a priori and many PF simulations are required to identify ranges of input thermo-mechanical parameters that can result in the onset of nucleation. Since many of the simulations do not result in nucleation, an analysis campaign often ends up wasting tremendous amounts of precious computing resources executing nucleation-absent simulations. The goal of this work is to design and train deep learning models to inform a PF simulation about the likelihood of the occurrence of nucleation in a future simulation time-step based on the state summary over a finite number of past time-steps of a running simulation. If the prediction determines that the running simulation is unlikely to reach nucleation in the allotted time, then its execution is stopped immediately ultimately resulting in vast reduction in wasted computations when accrued over all the PF simulations typically performed in a single or multiple analysis campaign(s). The paper presents the performance of a machine learning pipeline that uses a convolutional neural network (CNN) model to learn an embedding which is then used with a self-attention network to build a multi-task deep learning model to predict the likelihood of nucleation. The model also predicts the input parameters used in a simulation. Performance is compared with a baseline pipeline that uses an off-the-shelf LeNet-5 model to learn the initial embedding. Despite their smaller size, performance results indicate significant improvement in accuracy of the proposed models compared to the larger baseline models.

Kannan, Ramakrishnan {ramki}↗

cuAlign: Scalable Network Alignment on GPU Accelerators

Given two graphs, the objective of network alignment is to find the best one-to-one mapping of vertices in one graph (??) to vertices in the other (??), such that the number of overlaps is maximized. We say that edges(??, ??) ???and(??', ??') ??? are overlapped if ?? is mapped to ??' and ?? is mapped to??'. Network alignment is an important optimization problem with several applications in bioinformatics, computer vision and ontology matching. Since it is an NP-hard problem, efficient heuristics and scalable implementations are necessary. In this work, we introduce a new framework that combines the concepts of intra-network proximity using vertex embedding,Belief Propagation (BP) and approximate weighted matching, and provides qualitative improvements up to22%over state-of-the-art approaches. We also provide scalable implementations on GPU accelerators, demonstrating up to19×speedup for Belief Propagation and 3× speedup for approximate weighted matching relative to previous multithreaded implementation. A combination of combinatorial and algebraic kernels within the network alignment algorithm poses significant hurdles for parallelization. Load imbalance and irregular DRAM traffic limit achievable performance on GPUs. Our novel approach identifies and exploits unique structural proper-ties of the BP-based algorithm and employs code fusion to reduce data movement between different steps of the algorithm. Using a diverse set of inputs, we demonstrate qualitative improvements of our algorithms, and performance gains of our GPU-accelerated implementation. We believe that our work will enable algorithmic improvements and practical applications of network alignment.

Xiang, Lizhi↗

Scaled Runge-Kutta algorithms for treating the problem of dense output

A set of scaled Runge-Kutta algorithms for the third- through fifth-orders are developed to determine the solution at any point within the integration step at a relatively small increase in computing time. Each scaled algorithm is designed to be used with an existing Runge-Kutta formula, using the derivative evaluations of the defining algorithm along with an additional derivative evaluation (or two). Third-order, scaled algorithms are embedded within the existing formulas at no additional derivative expense. Such algorithms can easily be adopted to generate interpolating polynomials (or dependent variable stops) efficiently.

Horn, M. K.↗

Engineering Performance

Under Goddard Space Flight Center and Jet Propulsion Laboratory SBIR (Small Business Innovative Research) contracts, AST Engineering Services, Inc. developed a system engineering computer software tool to model how certain applications will affect a proposed system's performance. Quantitative System Engineering (QASE) evaluates system timing, capacity and availability. The system is used to predict performance of proposed real-time, aerospace systems, embedded systems, and/or scientific systems, as well as in support of NASA's EDOS (Earth Observing System (EOS) Data and Operations System) initiative.

Source record↗

Reduced-Order Modeling of a Heaving Airfoil

A reduced-order model of a flapping airfoil is developed using Proper Orthogonal Decomposition (POD). The proper basis functions, developed from snapshots of full Navier-Stokes simulations, are used for a Galerkin projection of the governing equations. The resulting coupled, nonlinear ordinary di.erential equations have a low dimension because the first few basis members capture most of the energy of the flow. The reduced-order model is used to simulate heaving motions that are both similar to and different from the motion(s) used to generate the basis functions, and the errors in the model are quantified. Several methods are used to generate mode sets that can be used over a range of heaving parameters, including snapshots from one, two, and multiple Navier-Stokes simulations. As snapshots from additional simulations are added to the decomposition, the mode sets become richer and can simulate a wider range of parameter space, at some computational cost. Whereas the POD method is fully applicable in three dimensions, the simulation technique based on a body-fixed and body-fitted grid suffers large overhead when extended to three dimensions. To reduce the overhead, an embedding technique is discussed which embeds the solid wing into a fixed Cartesian grid. The wing, which can now have multiple pieces and also be flexible, is represented by a distribution of body forces. This distribution is determined to give exactly the flow around a flapping wing.

Haj-Hariri, H.↗

Towards Efficient Scientific Data Management Using Cloud Storage

A software prototype allows users to backup and restore data to/from both public and private cloud storage such as Amazon's S3 and NASA's Nebula. Unlike other off-the-shelf tools, this software ensures user data security in the cloud (through encryption), and minimizes users operating costs by using space- and bandwidth-efficient compression and incremental backup. Parallel data processing utilities have also been developed by using massively scalable cloud computing in conjunction with cloud storage. One of the innovations in this software is using modified open source components to work with a private cloud like NASA Nebula. Another innovation is porting the complex backup to- cloud software to embedded Linux, running on the home networking devices, in order to benefit more users.

He, Qiming↗

A Waveform Skewness Index for Measuring Time Series Nonlinearity and Its Applications to the ENSO-Indian Monsoon Relationship

Many geophysical time series possess nonlinear characteristics that reflect the underlying physics of the phenomena the time series describe. The nonlinear character of times series can change with time, so it is important to quantify time series nonlinearity without assuming stationarity. A common way of quantifying the time evolution of time series nonlinearity is to compute sliding skewness time series, but it is shown here that such an approach can be misleading when time series contain periodicities. To remedy this deficiency of skewness, a new waveform skewness index is proposed for quantifying local nonlinearities embedded in time series. A waveform skewness spectrum is proposed for determining the frequency components that are contributing to time series waveform skewness. The new methods are applied to the El Niño–Southern Oscillation (ENSO) and the Indian monsoon to test a recently proposed hypothesis that states that changes in the ENSO–Indian monsoon relationship are related to ENSO nonlinearity. We show that the ENSO–Indian rainfall relationship weakens during time periods of high ENSO waveform skewness. The results from two different analyses suggest that the breakdown of the ENSO–Indian monsoon relationship during time periods of high ENSO waveform skewness is related to the more frequent occurrence of strong central Pacific El Niño events, supporting arguments that changes in the ENSO–Indian rainfall relationship are not solely related to noise.

Justin Schulte↗

Tag and seal employing a micromachine artifact

A method and apparatus to authenticate a tamper resistant seal that includes a population of particles embedded in an adhesive, the population including at least one micromachine artifact of a predetermined physical shape.

47 OTHER INSTRUMENTATION↗

Long short-term memory embedded nudging schemes for nonlinear data assimilation of geophysical flows

Reduced rank nonlinear filters are increasingly utilized in data assimilation of geophysical flows, but often require a set of ensemble forward simulations to estimate forecast covariance. On the other hand, predictor-corrector type nudging approaches are still attractive due to their simplicity of implementation when more complex methods need to be avoided. However, optimal estimate of nudging gain matrix might be cumbersome. In this paper, we put forth a fully nonintrusive recurrent neural network approach based on a long short-term memory (LSTM) embedding architecture to estimate the nudging term, which plays a role not only to force the state trajectories to the observations but also acts as a stabilizer. Furthermore, our approach relies on the power of archival data and the trained model can be retrained effectively due to power of transfer learning in any neural network applications. In order to verify the feasibility of the proposed approach, we perform twin experiments using Lorenz 96 system. Our results demonstrate that the proposed LSTM nudging approach yields more accurate estimates than both extended Kalman filter (EKF) and ensemble Kalman filter (EnKF) when only sparse observations are available. With the availability of emerging AI-friendly and modular hardware technologies and heterogeneous computing platforms, we articulate that our simplistic nudging framework turns out to be computationally more efficient than either the EKF or EnKF approaches.

42 ENGINEERING↗