Structural Clustering: A New Approach to Support Performance Analysis at Scale
Abstract not provided
97 MATHEMATICS AND COMPUTING↗
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Results for “Cluster Analysis”
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Multimodal Image Analysis and Uncertainty Quantification via Nonparametric Probabilistic Clustering.
Abstract not provided.
Chen, Maximillian Gene↗
The Completed SDSS-IV Extended Baryon Oscillation Spectroscopic Survey: N-body Mock Challenge for Galaxy Clustering Measurements
We develop a series of N-body data challenges, functional to the final analysis of the extended Baryon Oscillation Spectroscopic Survey (eBOSS) Data Release 16 (DR16) galaxy sample. The challenges are primarily based on high-fidelity catalogues constructed from the Outer Rim simulation - a large box size realization (3h(-1) Gpc) characterized by an unprecedented combination of volume and mass resolution, down to 1.85 x 10(9) h(-1)M(circle dot). We generate synthetic galaxy mocks by populating Outer Rim haloes with a variety of halo occupation distribution (HOD) schemes of increasing complexity, spanning different redshift intervals. We then assess the performance of three complementary redshift space distortion (RSD) models in configuration and Fourier space, adopted for the analysis of the complete DR16 eBOSS sample of Luminous Red Galaxies (LRG5). We find all the methods mutually consistent, with comparable systematic errors on the Alcock-Paczynski parameters and the growth of structure, and robust to different HOD prescriptions - thus validating the robustness of the models and the pipelines used for the baryon acoustic oscillation (BAO) and full shape clustering analysis. In particular, all the techniques are able to recover and alpha(11) to within 0.9 per cent, and f sigma(8) to within 1.5 per cent. As a by-product of our work, we are also able to gain interesting insights on the galaxy-halo connection. Our study is relevant for the final eBOSS DR16 'consensus cosmology', as the systematic error budget is informed by testing the results of analyses against these high-resolution mocks. In addition, it is also useful for future large-volume surveys, since similar mock-making techniques and systematic corrections can be readily extended to model for instance the Dark Energy Spectroscopic Instrument (DESI) galaxy sample.
cosmology: theory, large-scale structure of Univer↗
Constraints on Nonthermal Pressure at Galaxy Cluster Outskirts from a Joint SPT and XMM-Newton Analysis
We present joint South Pole Telescope and XMM-Newton observations of eight massive galaxy clusters (0.8–2 × 10$^{15}$ M$_{⊙}$) spanning a redshift range of 0.16–0.35. Employing a novel Sunyaev–Zel’dovich + X-ray fitting technique, we effectively constrain the thermodynamic properties of these clusters out to the virial radius. The resulting best-fit electron density, deprojected temperature, and deprojected pressure profiles are in good agreement with previous observations of massive clusters. For the majority of the cluster sample (five out of eight clusters), the entropy profiles exhibit a self-similar behavior near the virial radius. We further derive hydrostatic mass, gas mass, and gas fraction profiles for all clusters up to the virial radius. Comparing the enclosed gas fraction profiles with the universal gas fraction profile, we obtain nonthermal pressure fraction profiles for our cluster sample at >0.5R$_{500}$, demonstrating a steeper increase between R$_{500}$ and R$_{200}$ that is consistent with the hydrodynamical simulations. Our analysis yields nonthermal pressure fraction ranges of 8%–28% (median: 15% ± 11%) at R$_{500}$ and 21%–35% (median: 27% ± 12%) at R$_{200}$. Notably, weak-lensing mass measurements are available for only four clusters in our sample, and our recovered total cluster masses, after accounting for nonthermal pressure, are consistent with these measurements.
79 ASTRONOMY AND ASTROPHYSICS↗
The many-body expansion for aqueous systems revisited: III. Hofmeister ion – water interactions
We report a Many Body Energy (MBE) analysis of aqueous ionic clusters containing anions and cations at the two opposite ends of the Hofmeister series, viz. the kosmotropes Ca2+, SO42- and chaotropes NH4+ and ClO4- with 9 water molecules to quantify the how these ions in altering the interaction between the water molecules in their immediate surrounding. The current results are contrasted to the ones reported earlier for water clusters as well as for alkali metal and halide ion aqueous clusters of the same size, which lie in the middle of the Hofmeister series. Through this analysis, noteworthy differences between the MBE of kosmotropes and chaotropes were identified. The MBE of kosmotropes is dominated by ion-water interactions that extends beyond the 4-body term, the point at which the MBE of pure water converges. The percentage contribution of the 2- B to the total cluster binding energy is noticeably larger. The disruption due to the dominant ion results in weak, unfavorable water-water interactions. The MBE for chaotropes, on the other hand, was found to converge more quickly as it more closely resembles that of pure water clusters. Chaotropes exhibit weaker overall binding energies and ion-water interactions with more favorable water-water interactions, somewhat recovering the pattern of the 2-4 body terms exemplified by pure water clusters. More importantly, both kosmotropic and chaotropic ions exhibit an anticorrelation between the 2-B ion-water (I-W) and water-water (W-W) interactions as well as between the 3-B (I-W-W) and (I-W) interactions. The consideration of two different structural arrangements (ion inside and outside of a water cluster) suggests that fully solvated (ion inside) chaotropes disrupt the hydrogen bonding network in a similar manner as partially solvated (ion outside) kosmotropes and offer useful insights into the modeling requirements of bulk vs. an interface. Finally, the 2-B contribution to the total Basis Set Superposition Error (BSSE) correction for the kosmotropic and chaotropic ions follows the previously reported erf profile vs. intermolecular distance. When scaled for the corresponding dimer energies and distances, a single profile fits the current results together with all previously reported ones for the pure water and halide water clusters.
Herman, Kristina M.↗
The Gaseous Content of the Universe at Zeta less than 1.6
Together with graduate student Hsiao-Wen Chen, I have measured and analyzed structural and morphological parameters of 38 galaxies in eight fields for which sensitive measurements of corresponding Ly(alpha) absorption toward background QSOs are available. These measurements are based on Wide Field Planetary Camera 2 (WFPC2) observations obtained with the Hubble Space Telescope (HST) and provide a first look at how the incidence and extent of tenuous gas around galaxies depends on galaxy luminosity, size, and morphological type and on geometry of the impact. The primary result of the analysis is that the amount of gas encountered along the line of sight depends on the galaxy impact parameter and B-band luminosity but does not depend strongly on the galaxy average surface brightness, disk-to-bulge ratio, or redshift. This result confirms and improves upon an anti-correlation between Ly(alpha) absorption equivalent width and galaxy impact parameter found previously. More importantly, this result provides the first quantitative means of relating statistics of faint galaxies to statistics of Ly(alpha) absorption systems. which we plan to exploit to constrain the luminosity function of galaxies beyond the realm of current surveys. Results have been submitted for publication and will greatly improve our statistical conclusions . Together with graduate student Noriaki Yahata. I have measured and classified spectral properties of over 1000 faint galaxies and stars obtained in our low-resolution spectroscopic survey. The goal of this project is two-fold: (1) to exhaustively characterize the spectral properties of all faint galaxies that comprise our current survey, and (2) to gain experience with our measurement and classification code. which ultimately will be used on a data base of 20,000 galaxies to be obtained with the Two-Degree Field (2df) spectrograph at the Anglo-Australian Telescope (AAT). The results will ultimately be used for many goals, but so far we have concentrated on using the results to make a binary classification of the galaxies (i.e. early type versus late type) and to then exploit the density-morphology relationship to obtain a crude density indicator. The primary result of the analysis is that the incidence and extent of tenuous gas around galaxies shows no strong preference for local galaxy environment, at least over the range of densities spanned by the current observations. Along similar lines, two instances of Ly(alpha) absorption lines that arise in groups or clusters were examined. Analysis demonstrates that some can produce corresponding absorption lines and that LY(alpha) absorption lines do not avoid a high-density environment. A new measure of the galaxy-absorber cross-correlation function defines the statistical criterion by which galaxies and absorber pairs are to be matched. I have identified a damped Ly(alpha) absorption system at redshift z equals approximately 0.16, the lowest redshift confirmed to date. The most important results of the analysis are learning that the metal abundances of the absorption system are less than 10 percent of the solar metal abundance and that the absorbing gas is not rotating with the galaxy disk.
Source record↗
Mechanism of vacancy formation induced by hydrogen in tungsten
We report a hydrogen induced vacancy formation mechanism in tungsten based on classical molecular dynamics simulations. We demonstrate the vacancy formation in tungsten due to the presence of hydrogen associated directly with a stable hexagonal self-interstitial cluster as well as a linear crowdion. The stability of different self-interstitial structures has been further studied and it is particularly shown that hydrogen plays a crucial role in determining the configuration of SIAs, in which the hexagonal cluster structure is preferred. Energetic analysis has been carried out to prove that the formation of SIA clusters facilitates the formation of vacancies. Such a mechanism contributes to the understanding of the early stage of the hydrogen blistering in tungsten under a fusion reactor environment.
36 MATERIALS SCIENCE↗
Precision growth index using the clustering of cosmic structures and growth data
We use the clustering properties of Luminous Red Galaxies (LRGs) and the growth rate data provided by the various galaxy surveys in order to constrain the growth index γ) of the linear matter fluctuations. We perform a standard χ{sup 2}-minimization procedure between theoretical expectations and data, followed by a joint likelihood analysis and we find a value of γ=0.56± 0.05, perfectly consistent with the expectations of the ΛCDM model, and Ω{sub m0} =0.29± 0.01, in very good agreement with the latest Planck results. Our analysis provides significantly more stringent growth index constraints with respect to previous studies, as indicated by the fact that the corresponding uncertainty is only ∼ 0.09 γ. Finally, allowing γ to vary with redshift in two manners (Taylor expansion around z=0, and Taylor expansion around the scale factor), we find that the combined statistical analysis between our clustering and literature growth data alleviates the degeneracy and obtain more stringent constraints with respect to other recent studies.
79 ASTRONOMY AND ASTROPHYSICS↗
Do blue galaxy-clusters have hot intracluster gas?
Abstract We present herein a systematic X-ray analysis of blue galaxy clusters at z = 0.84 discovered by the Subaru telescope. The sample consisted of 43 clusters identified by combining red-sequence and blue-cloud surveys, covering a wide range of emitter fractions (i.e., 0.3–0.8). The spatial extent of the over-density region of emitter galaxies was approximately 1 Mpc in radius. The average cluster mass was estimated as 0.6(<1.5) × 1014 M⊙ from the stacked weak-lensing measurement. We analyzed the XMM-Newton archival data, and measured the X-ray luminosity of the hot intracluster medium. As a result, diffuse X-ray emission was marginally detected in 14 clusters, yielding an average luminosity of 5 × 1042 erg s−1. To the contrary, it was not significant in 29 clusters. The blue clusters were significantly fainter than the red-dominated clusters, and the X-ray luminosity did not show any meaningful correlation either with emitter fraction or richness. The X-ray surface brightness was low, but the amount of gas mass was estimated to be comparable to that observed in the 1013–1014 M⊙ cluster. Based on the results, we suggest that the blue clusters are at the early formation stage, and the gas is yet to be compressed and heated up to produce appreciable X-rays. Follow-up spectroscopic measurements are essential to clarify the dynamical status and co-evolution of galaxies and hot gas in the blue clusters.
Misato, Rana↗
Diffusion of small anti-Schottky clusters in UO 2
The aggregation of irradiation-induced defect clusters in UO 2 leads to the formation of dislocation loops and cavities which contribute swelling and ultimately produce deleterious effects on the fuel. Despite their fundamental role in fuel evolution, the kinetics of these defect clusters are not currently well understood. In this work, we investigate the diffusive behavior of interstitial clusters via Molecular Dynamics (MD) simulations. In this work, our investigation considers a range of defect cluster sizes, each composed of N UO 2 units or anti-Schottky defects. We report a complex cluster size - mobility relation; increasing cluster size corresponds to an increase in mobility up until a critical size (N=4) where diffusivity reaches a maximum, after which the trend reverts and further increasing size corresponds to a decrease in mobility. The rapid migration observed correlates well with the very low barriers reported in a few historic experimental studies. Further analysis of the cluster shape and orientation reveals a strong structural preference for near-planar configurations oriented normal to the $\langle$100$\rangle$ direction. Rotational energy barriers are found to be similar in both magnitude and trend to the observed diffusion barriers. Lastly, connections are drawn to the behavior of large defect clusters including the formation of (1/3) $\langle$111$\rangle$ Frank dislocation loops.
36 MATERIALS SCIENCE↗
Three-Dimensional Modeling of Fracture Clusters in Geothermal Reservoirs
The objective of this is to develop a 3-D numerical model for simulating mode I, II, and III (tensile, shear, and out-of-plane) propagation of multiple fractures and fracture clusters to accurately predict geothermal reservoir stimulation using the virtual multi-dimensional internal bond (VMIB). Effective development of enhanced geothermal systems can significantly benefit from improved modeling of hydraulic fracturing. In geothermal reservoirs, where the temperature can reach or exceed 350oC, thermal and poro-mechanical processes play an important role in fracture initiation and propagation. In this project hydraulic fracturing of hot subsurface rock mass will be numerically modeled by extending the virtual multiple internal bond theory and implementing it in a finite element code, WARP3D, a three-dimensional finite element code for solid mechanics. The new constitutive model along with the poro-thermoelastic computational algorithms will allow modeling the initiation and propagation of clusters of fractures, and extension of pre-existing fractures. The work will enable the industry to realistically model stimulation of geothermal reservoirs. The project addresses the Geothermal Technologies Office objective of accurately predicting geothermal reservoir stimulation (GTO technology priority item). The project goal will be attained by: (i) development of the VMIB method for application to 3D analysis of fracture clusters; (ii) development of poro- and thermoelastic material sub-routines for use in 3D finite element code WARP3D; (iii) implementation of VMIB and the new material routines in WARP3D to enable simulation of clusters of fractures while accounting for the effects of the pore pressure, thermal stress and inelastic deformation; (iv) simulation of 3D fracture propagation and coalescence and formation of clusters, and comparison with laboratory compression tests; and (v) application of the model to interpretation of injection experiments (planned by our industrial partner) with reference to the impact of the variations in injection rate and temperature, rock properties, and in-situ stress.
15 GEOTHERMAL ENERGY↗
Dark Energy Survey Year 6 Results: Redshift Calibration of the MagLim++ Lens Sample
In this work, we derive and calibrate the redshift distribution of the MagLim++ lens galaxy sample used in the Dark Energy Survey Year 6 (DES Y6) 3x2pt cosmology analysis. The 3x2pt analysis combines galaxy clustering from the lens galaxy sample and weak gravitational lensing. The redshift distributions are inferred using the SOMPZ method - a Self-Organizing Map framework that combines deep-field multi-band photometry, wide-field data, and a synthetic source injection (Balrog) catalog. Key improvements over the DES Year 3 (Y3) calibration include a noise-weighted SOM metric, an expanded Balrog catalogue, and an improved scheme for propagating systematic uncertainties, which allows us to generate O($10^8$) redshift realizations that collectively span the dominant sources of uncertainty. These realizations are then combined with independent clustering-redshift measurements via importance sampling. The resulting calibration achieves typical uncertainties on the mean redshift of 1-2%, corresponding to a 20-30% average reduction relative to DES Y3. We compress the $n(z)$ uncertainties into a small number of orthogonal modes for use in cosmological inference. Marginalizing over these modes leads to only a minor degradation in cosmological constraints. This analysis establishes the MagLim++ sample as a robust lens sample for precision cosmology with DES Y6 and provides a scalable framework for future surveys.
Giannini, G. [Chicago U., Astron. Astrophys. Ctr.;↗
Dark Energy Survey Year 6 results: Redshift calibration of the MagLim++ lens sample
In this work, we derive and calibrate the redshift distribution of the MagLim++ lens galaxy sample used in the Dark Energy Survey Year 6 (DES Y6) 3 x 2pt cosmology analysis. The 3 x 2pt analysis combines galaxy clustering from the lens galaxy sample and weak gravitational lensing. The redshift distributions are inferred using the SOMPZ method - a Self-Organizing Map framework that combines deep-field multi-band photometry, wide-field data, and a synthetic source injection ( B alrog) catalog. Key improvements over the DES Year 3 (Y3) calibration include a noise-weighted SOM metric, an expanded Balrog catalogue, and an improved scheme for propagating systematic uncertainties, which allows us to generate O(10 8 ) redshift realizations that collectively span the dominant sources of uncertainty. These realizations are then combined with independent clustering-redshift measurements via importance sampling. The resulting calibration achieves typical uncertainties on the mean redshift of 1-2%, corresponding to a 20-30% average reduction relative to DES Y3. We compress the n(z) uncertainties into a small number of orthogonal modes for use in cosmological inference. Marginalizing over these modes leads to only a minor degradation in cosmological constraints. Here, this analysis establishes the MagLim++ sample as a robust lens sample for precision cosmology with DES Y6 and provides a scalable framework for future surveys.
dark energy↗
Elevated Expression of a Functional Suf Pathway in Escherichia coli BL21(DE3) Enhances Recombinant Production of an Iron-Sulfur Cluster-Containing Protein
Structural and spectroscopic analysis of iron-sulfur [Fe-S] cluster-containing proteins is often limited by the occupancy and yield of recombinantly produced proteins. In this work, we report that Escherichia coli BL21(DE3), a strain routinely used to overproduce [Fe-S] cluster-containing proteins, has a nonfunctional Suf pathway, one of two E. coli [Fe-S] cluster biogenesis pathways. We confirmed that BL21(DE3) and commercially available derivatives carry a deletion that results in an in-frame fusion of sufA and sufB genes within the sufABCDSE operon. We show that this fusion protein accumulates in cells but is inactive in [Fe-S] cluster biogenesis. Restoration of an intact Suf pathway combined with enhanced suf operon expression led to a remarkable (~3-fold) increase in the production of the [4Fe-4S] cluster-containing BchL protein, a key component of the dark-operative protochlorophyllide oxidoreductase complex. These results show that this engineered “SufFeScient” derivative of BL21(DE3) is suitable for enhanced large-scale synthesis of an [Fe-S] cluster-containing protein.
59 BASIC BIOLOGICAL SCIENCES↗
Legacy ExtraGalactic UV Survey with The Hubble Space Telescope: Stellar Cluster Catalogs and First Insights Into Cluster Formation and Evolution in NGC 628
We report the large effort that is producing comprehensive high-level young star cluster (YSC) catalogs for a significant fraction of galaxies observed with the Legacy ExtraGalactic UV Survey (LEGUS) Hubble treasury program. We present the methodology developed to extract cluster positions, verify their genuine nature, produce multiband photometry (from NUV to NIR), and derive their physical properties via spectral energy distribution fitting analyses. We use the nearby spiral galaxy NGC 628 as a test case for demonstrating the impact that LEGUS will have on our understanding of the formation and evolution of YSCs and compact stellar associations within their host galaxy. Our analysis of the cluster luminosity function from the UV to the NIR finds a steepening at the bright end and at all wavelengths suggesting a dearth of luminous clusters. The cluster mass function of NGC 628 is consistent with a power-law distribution of slopes ∼−2 and a truncation of a few times 10{sup 5} M{sub ⊙}. After their formation, YSCs and compact associations follow different evolutionary paths. YSCs survive for a longer time frame, confirming their being potentially bound systems. Associations disappear on timescales comparable to hierarchically organized star-forming regions, suggesting that they are expanding systems. We find mass-independent cluster disruption in the inner region of NGC 628, while in the outer part of the galaxy there is little or no disruption. We observe faster disruption rates for low mass (≤10{sup 4} M{sub ⊙}) clusters, suggesting that a mass-dependent component is necessary to fully describe the YSC disruption process in NGC 628.
79 ASTRONOMY AND ASTROPHYSICS↗
The z ∼ 1.03 Merging Cluster SPT-CL J0356–5337: New Strong Lensing Analysis with HST and MUSE
We present a strong lensing analysis and reconstruct the mass distribution of SPT-CL J0356−5337, a galaxy cluster at redshift z = 1.034. Our model supersedes previous models by making use of new multiband Hubble Space Telescope data and Multi-Unit Spectroscopic Explorer (MUSE) spectroscopy. We identify two additional lensed galaxies to inform a more well-constrained model using 12 sets of multiple images in five separate lensed sources. The three previously known sources were spectroscopically confirmed by G. Mahler et al. at redshifts of z = 2.363, z = 2.364, and z = 3.048. We measured the spectroscopic redshifts of two of the newly discovered arcs using MUSE data, at z = 3.0205 and z = 5.3288. We increase the number of cluster member galaxies by a factor of 3 compared to previous work. We also report the detection of extended Lyα emission from several background galaxies. We measure the total projected mass density of the two major subcluster components, one dominated by the brightest cluster galaxy and the other by a compact group of luminous red galaxies. We find ${M}_{{\rm{B}}{\rm{C}}{\rm{G}}}(\lt 80\,\rm{kpc})=3.9{3}_{-0.14}^{+0.21}\times 1{0}^{13}$ M⊙ and ${M}_{{\rm{LRG}}}(\lt 80\,\rm{kpc})=2.9{2}_{-0.23}^{+0.16}\times 1{0}^{13}$ M⊙, yielding a mass ratio of $1.3{5}_{-0.08}^{+0.16}$ . The strong lensing constraints offer a robust estimate of the projected mass density regardless of modeling assumptions; allowing more substructure in this line of sight does not change the results or conclusions. Our results corroborate the conclusion that SPT-CL J0356−5337 is dominated by two mass components and is likely undergoing a major merger on the plane of the sky.
79 ASTRONOMY AND ASTROPHYSICS↗
The K2 M67 study: revisiting old friends with K2 reveals oscillating red giants in the open cluster M67
Observations of stellar clusters have had a tremendous impact in forming our understanding of stellar evolution. The open cluster M67 has a particularly important role as a calibration benchmark for stellar evolution theory due to its near-solar composition and age. As a result, it has been observed extensively, including attempts to detect solar-like oscillations in its main sequence and red giant stars. However, any asteroseismic inference has so far remained elusive due to the difficulty in measuring these extremely low-amplitude oscillations. Here we report the first unambiguous detection of solar-like oscillations in the red giants of M67. We use data from the Kepler ecliptic mission, K2, to measure the global asteroseismic properties. We find a model-independent seismic-informed distance of 816 ± 11 pc, or (m−M){sub 0} = 9.57±0.03 mag, an average red giant mass of 1.36±0.01 M{sub ⊙}, in agreement with the dynamical mass from an eclipsing binary near the cluster turn-off, and ages of individual stars compatible with isochrone fitting. We see no evidence of strong mass loss on the red giant branch. We also determine seismic logg of all the cluster giants with a typical precision of ∼0.01 dex. Our results generally show good agreement with independent methods and support the use of seismic scaling relations to determine global properties of red giant stars with near-solar metallicity. We further illustrate that the data are of such high quality that future work on individual mode frequencies should be possible, which would extend the scope of seismic analysis of this cluster.
79 ASTRONOMY AND ASTROPHYSICS↗
Reference Site Conditions for Floating Wind Arrays in the United States
Floating offshore wind farm design is highly site-specific, requiring detailed information about the specific conditions of a project area for realistic design studies. Unfortunately, publicly available site condition data for potential floating offshore wind project sites in the United States is scarce. To support U.S. offshore wind research, we developed reference site condition datasets, including metocean and seabed information, for four potential floating wind project areas in the U.S.: Humboldt Bay, Morro Bay, the Gulf of Maine, and the Gulf of Mexico. These datasets were compiled using publicly available data. Our metocean analysis, covering wind, waves, and surface currents, utilized measurement data from 2000 to 2020. Sources included the National Renewable Energy Laboratory’s National Offshore Wind Dataset for wind data, National Data Buoy Center buoys for wave data, and the High Frequency Radar Network for surface currents. These data were integrated into hourly time series used to compute extreme return periods up to 500 years, monthly statistics, and joint probability clusters for fatigue analysis. Soil conditions were evaluated using the usSEABED database and bathymetry grids were interpolated from the NCEI Digital Elevation Model Global Mosaic. In addition to providing curated reference site condition datasets for four U.S. areas, our assessment highlights the need for more publicly available metocean and soil condition data.
17 WIND ENERGY↗