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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 847 records · Page 47

Characterization of Canopy Layering in Forested Ecosystems Using Full Waveform Lidar

Canopy structure, the vertical distribution of canopy material, is an important element of forest ecosystem dynamics and habitat preference. Although vertical stratification, or "canopy layering," is a basic characterization of canopy structure for research and forest management, it is difficult to quantify at landscape scales. In this paper we describe canopy structure and develop methodologies to map forest vertical stratification in a mixed temperate forest using full-waveform lidar. Two definitions-one categorical and one continuous-are used to map canopy layering over Hubbard Brook Experimental Forest, New Hampshire with lidar data collected in 2009 by NASA's Laser Vegetation Imaging Sensor (LVIS). The two resulting canopy layering datasets describe variation of canopy layering throughout the forest and show that layering varies with terrain elevation and canopy height. This information should provide increased understanding of vertical structure variability and aid habitat characterization and other forest management activities.

lidar↗

The influence of burn severity on dissolved organic carbon concentrations across a stream network differs based on seasonal wetness conditions

Large, high-severity wildfires in many regions across the globe have increased concerns about their impacts on carbon cycling in watersheds. Altered sources of carbon and changes in catchment hydrology after wildfire can lead to shifts in dissolved organic carbon (DOC) concentrations in streams, which can have negative impacts on aquatic ecosystem health and downstream drinking-water treatment. Despite its importance, post-fire DOC responses remain relatively unconstrained in the literature, and we lack critical knowledge of how burn severity, landscape elements, and climate interact to affect DOC concentrations. To improve our understanding of the impact of burn severity on DOC concentrations, we measured DOC at 129 sites across a stream network extending upstream, within, and downstream of a large, high-severity wildfire in Oregon, USA. We collected samples across the study sub-basin during four distinct seasonal wetness conditions. We used our high-spatial-resolution data to develop spatial stream network (SSN) models to predict DOC across the stream network and to improve our understanding of the controls on DOC concentrations. Spatially, we found no obvious wildfire signal – instead, we observed a pattern of increasing DOC concentrations from the high-elevation headwaters to the sub-basin outlet, while the mainstem maintained consistently low DOC concentrations. This suggests that effects from large wildfires may be “averaged” out at higher stream orders and larger spatial scales. When we grouped DOC concentrations by burn severity group, we observed a significant decrease in the variability of DOC concentrations in the moderate and high burn severity sub-catchments. However, our SSN models were able to predict decreases in DOC concentrations with increases in burn severity across the stream network. Decreases in DOC concentrations were also highly variable across seasonal wetness conditions, with the greatest (–1.40 to –1.64 mg L –1 ) decrease occurring in the high-severity group during the wetting season. Additionally, our models indicated that in all seasons, baseflow index was more influential in predicting DOC concentrations than burn severity was, indicating that groundwater discharge can obscure the impacts of wildfire in a stream network. Overall, our results suggested that landscape characteristics can regulate the DOC response to wildfire. Moreover, our results also indicated that the seasonal timing of sampling can influence the observed response of DOC concentrations to wildfire.

54 ENVIRONMENTAL SCIENCES↗

What's Left for a Computational Chemist To Do in the Age of Machine Learning?

Machine learning (ML) has become a central focus of the computational chemistry community. In this paper, I will first discuss my personal history in the field. Then I will provide a broader view of how this resurgence in ML interest echoes and advances upon earlier efforts. Although numerous changes have brought about this latest wave, one of the most significant is the increased accuracy and efficiency of low-cost methods (e.g., density functional theory or DFT) that have made it possible to generate large data sets for ML models. ML has also been used to bypass, guide, or improve DFT. The field of computational chemistry thus finds itself at a crossroads as ML both augments and supersedes traditional efforts. I will present what I believe the role of the computational chemist will be in this evolving landscape, with specific focus on my experience in the development of autonomous workflows in computational materials discovery for open-shell transition-metal chemistry.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

AmeriFlux FLUXNET-1F BR-ITA MataFLUX: Multi-species tree restoration planting

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site BR-ITA MataFLUX: Multi-species tree restoration planting. This is the FLUXNET version of the carbon flux data for the site BR-ITA MataFLUX: Multi-species tree restoration planting produced by applying the standard ONEFlux (1F) software. Site Description - This tower is situated at the Itatinga Research Station (USP-ESALQ), located within the Brazilian Atlantic Forest. The station focuses on promoting forest research and features a landscape consisting of eucalyptus plantations and native species restoration areas.

Guillemot, Joannès [Cirad]↗

A map of the rubisco biochemical landscape

Rubisco is the primary CO 2 -fixing enzyme of the biosphere, yet it has slow kinetics. The roles of evolution and chemical mechanism in constraining its biochemical function remain debated. Engineering efforts aimed at adjusting the biochemical parameters of rubisco have largely failed, although recent results indicate that the functional potential of rubisco has a wider scope than previously known. Here we developed a massively parallel assay, using an engineered Escherichia coli in which enzyme activity is coupled to growth, to systematically map the sequence–function landscape of rubisco. Composite assay of more than 99% of single-amino acid mutants versus CO 2 concentration enabled inference of enzyme velocity and apparent CO 2 affinity parameters for thousands of substitutions. This approach identified many highly conserved positions that tolerate mutation and rare mutations that improve CO 2 affinity. These data indicate that non-trivial biochemical changes are readily accessible and that the functional distance between rubiscos from diverse organisms can be traversed, laying the groundwork for further enzyme engineering efforts.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Analysis of carbon capture at cellulosic biorefineries

The large-scale production of cellulosic biofuels would involve spatially distributed systems including biomass fields, logistics networks and biorefineries. Better understanding of the interactions between landscape-related decisions and the design of biorefineries with carbon capture and storage (CCS) in a supply chain context is needed to enable efficient systems. Here we analyse the cost and greenhouse gas mitigation potential for cellulosic biofuel supply chains in the US Midwest using realistic spatially explicit land availability and crop productivity data and consider fuel conversion technologies with detailed CCS design for their associated CO2 streams.

carbon capture and storage (CCS)↗

Connecting the Dots: An Assessment of Cyber-risks in Networked Building and Municipal Infrastructure Systems

The buildings and city streets we walk down are changing. Driven by various data-driven use cases, there is increased interest in networking and integrating lighting and other building systems (e.g., heating, ventilation, and air conditioning (HVAC), security, scheduling) that were previously not internet-facing, and equipping them with sensors that collect information about their environment and the people that inhabit it. These data-enabled systems can potentially deliver improved occupant and resident experiences and help meet the U.S. Department of Energy (DOE) national energy and carbon reduction goals. Deploying connected devices new to being networked, however, is not without its challenges. This paper explores tools available to system designers and integrators that facilitate a cybersecurity landscape assessment – or more specifically the identification of threats, vulnerabilities, and adversarial behaviors that could be used against these networked systems. These assessments can help stakeholders shift security prioritization proactively toward the beginning of the development process.

cyber-risk assesment, adversarial behavior, MITRE ↗

Scalable Graph Analytics and HPC Operational Enhancement: Parallel Computing and ML/DL Innovations

Parallel computing plays a pivotal role in the efficient processing of large-scale graphs. Complex network analysis stands as a capti- vating research frontier, holding promise across diverse scientific domains such as sociology, biology, online media, and recommenda- tion systems. In this era, Machine Learning (ML) and Deep Learning (DL) have emerged as indispensable tools, underpinning remarkable technological achievements. Within this dynamic landscape, my research revolves around advancing parallel algorithms tailored for large-scale graph operations. To achieve this, I harness the power of cutting-edge technologies including OpenMP, MPI, HIP, and CUDA, on the High-Performance Computing (HPC) platforms to unlock optimal performance. I also apply ML/DL techniques to HPC operational data, to streamline the monitoring and maintenance of supercomputers, alleviating the complexities associated with their upkeep and enhancing user support. My research echoes the syn- ergy between parallel computing, large-scale graph analysis, and ML/DL, improving computational efficiency and user experience.

Sattar, Naw Safrin↗

Navigating the Expansive Landscapes of Soft Materials: A User Guide for High-Throughput Workflows

Synthetic polymers are highly customizable with tailored structures and functionality, yet this versatility generates challenges in the design of advanced materials due to the size and complexity of the design space. Thus, exploration and optimization of polymer properties using combinatorial libraries has become increasingly common, which requires careful selection of synthetic strategies, characterization techniques, and rapid processing workflows to obtain fundamental principles from these large data sets. Herein, we provide guidelines for strategic design of macromolecule libraries and workflows to efficiently navigate these high-dimensional design spaces. We describe synthetic methods for multiple library sizes and structures as well as characterization methods to rapidly generate data sets, including tools that can be adapted from biological workflows. We further highlight relevant insights from statistics and machine learning to aid in data featurization, representation, and analysis. This Perspective acts as a “user guide” for researchers interested in leveraging high-throughput screening toward the design of multifunctional polymers and predictive modeling of structure–property relationships in soft materials.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Resource Prospector Instrumentation for Lunar Volatiles Prospecting, Sample Acquisition and Processing

Data gathered from lunar missions within the last two decades have significantly enhanced our understanding of the volatile resources available on the lunar surface, specifically focusing on the polar regions. Several orbiting missions such as Clementine and Lunar Prospector have suggested the presence of volatile ices and enhanced hydrogen concentrations in the permanently shadowed regions of the moon. The Lunar Crater Observation and Sensing Satellite (LCROSS) mission was the first to provide direct measurement of water ice in a permanently shadowed region. These missions with other orbiting assets have laid the groundwork for the next step in the exploration of the lunar surface; providing ground truth data of the volatiles by mapping the distribution and processing lunar regolith for resource extraction. This next step is the robotic mission Resource Prospector (RP). Resource Prospector is a lunar mission to investigate 'strategic knowledge gaps' (SKGs) for in-situ resource utilization (ISRU). The mission is proposed to land in the lunar south pole near a permanently shadowed crater. The landing site will be determined by the science team with input from broader international community as being near traversable landscape that has a high potential of containing elevated concentrations of volatiles such as water while maximizing mission duration. A rover will host the Regolith & Environment Science and Oxygen & Lunar Volatile Extraction (RESOLVE) payload for resource mapping and processing. The science instruments on the payload include a 1-meter drill, neutron spectrometer, a near infrared spectrometer, an operations camera, and a reactor with a gas chromatograph-mass spectrometer for volatile analysis. After the RP lander safely delivers the rover to the lunar surface, the science team will guide the rover team on the first traverse plan. The neutron spectrometer (NS) and near infrared (NIR) spectrometer instruments will be used as prospecting tools to guide the traverse path. The NS will map the water-equivalent hydrogen concentration as low as 0.5% by weight to an 80 centimeter depth as the rover traverses the lunar landscape. The NIR spectrometer will measure surficial H2O/OH as well as general mineralogy. When the prospecting instruments identify a potential volatile-rich area during the course of a traverse, the prospect is then mapped out and the most promising location identified. An augering drill capable of sampling to a depth of 100 centimeters will excavate regolith for analysis. A quick assay of the drill cuttings will be made using an operations camera and NIR spectrometer. With the water depth confirmed by this first auguring activity, a regolith sample may be extracted for processing. The drill will deliver the regolith sample to a crucible that will be sealed and heated. Evolved volatiles will be measured by a gas chromatograph-mass spectrometer and the water will be captured and photographed. RP is a solar powered mission, which given the polar location translates to a relatively short mission duration on the order of 4-15 days. This short mission duration drives the concept of operations, instrumentation, and data analysis towards critical real time analysis and decision support. Previous payload field tests have increased the fidelity of the hardware, software, and mission operations. Current activities include a mission level field test to optimize interfaces between the payload and rover as well as better understand the interaction of the science and rover teams during the mission timeline. This paper will include the current status of the science instruments on the payload as well as the integrated field test occurring in fall of 2015. The concept of operations will be discussed, including the real time science and engineering decision-making process based on the critical data from the instrumentation. The path to flight will be discussed with the approach to this ambitious low cost mission.

ISRU↗

PanDA: Production and Distributed Analysis System

The Production and Distributed Analysis (PanDA) system is a data-driven workload management system engineered to operate at the LHC data processing scale. The PanDA system provides a solution for scientific experiments to fully leverage their distributed heterogeneous resources, showcasing scalability, usability, flexibility, and robustness. The system has successfully proven itself through nearly two decades of steady operation in the ATLAS experiment, addressing the intricate requirements such as diverse resources distributed worldwide at about 200 sites, thousands of scientists analyzing the data remotely, the volume of processed data beyond the exabyte scale, dozens of scientific applications to support, and data processing over several billion hours of computing usage per year. PanDA’s flexibility and scalability make it suitable for the High Energy Physics community and wider science domains at the Exascale. Beyond High Energy Physics, PanDA’s relevance extends to other big data sciences, as evidenced by its adoption in the Vera C. Rubin Observatory and the sPHENIX experiment. As the significance of advanced workflows continues to grow, PanDA has transformed into a comprehensive ecosystem, effectively tackling challenges associated with emerging workflows and evolving computing technologies. The paper discusses PanDA’s prominent role in the scientific landscape, detailing its architecture, functionality, deployment strategies, project management approaches, results, and evolution into an ecosystem.

97 MATHEMATICS AND COMPUTING↗

Mechanisms of SARS-CoV-2 neutralization by shark variable new antigen receptors elucidated through X-ray crystallography

Single-domain Variable New Antigen Receptors (VNARs) from the immune system of sharks are the smallest naturally occurring binding domains found in nature. Possessing flexible paratopes that can recognize protein motifs inaccessible to classical antibodies, VNARs have yet to be exploited for the development of SARS-CoV-2 therapeutics. Here, we detail the identification of a series of VNARs from a VNAR phage display library screened against the SARS-CoV-2 receptor binding domain (RBD). The ability of the VNARs to neutralize pseudotype and authentic live SARS-CoV-2 virus rivalled or exceeded that of full-length immunoglobulins and other single-domain antibodies. Crystallographic analysis of two VNARs found that they recognized separate epitopes on the RBD and had distinctly different mechanisms of virus neutralization unique to VNARs. Structural and biochemical data suggest that VNARs would be effective therapeutic agents against emerging SARS-CoV-2 mutants, including the Delta variant, and coronaviruses across multiple phylogenetic lineages. This study highlights the utility of VNARs as effective therapeutics against coronaviruses and may serve as a critical milestone for nearing a paradigm shift of the greater biologic landscape.

60 APPLIED LIFE SCIENCES↗

Field‐scale analysis of miscanthus production indicates climate change may increase the opportunity for water quality improvement in a key Iowa watershed

Abstract The Raccoon River Basin is the primary source for drinking water in Iowa's largest city and plays a major role in the Mississippi River Basin's high nutrient exports. Future climate change may have major impacts on the biological, physiological, and agronomic processes imposing a threat to ecosystem services. Efforts to reduce nitrogen (N) loads within this basin have included local litigation and the implementation of the Iowa Nutrient Reduction Strategy, which suggest incorporating bioenergy crops (i.e., miscanthus) within the current corn–soybean landscape to reach a 41% reduction in nitrate loads. This study focuses on simulating N export for historical and future land use scenarios by using an agroecosystem model (Agro‐IBIS) and a hydrology model (THMB) at the 500‐m resolution, similar to the scale of agricultural fields. Model simulations are driven by CMIP5 climate data for historical, mid‐century, and late‐century under the RCP 4.5 and 8.5 warming projections. Using recent crop profit analyses for the state of Iowa, profitability maps were generated and nitrogen leaching thresholds were used to determine where miscanthus should replace corn–soybean area to maximize reductions in N pollution. Our results show that miscanthus inclusion on low profit and high N leaching areas can result in a 4% reduction of N loss under current climate conditions and may reduce N loss by 21%–26% under future climate conditions, implying that water quality has the potential continue to improve under future climate conditions when strategically implemented conservation practices are included in future farm management plans.

54 ENVIRONMENTAL SCIENCES↗

Integrated Biophysical Modeling and Image Analysis: Application to Neuro-Oncology

Central nervous system (CNS) tumors come with vastly heterogeneous histologic, molecular, and radiographic landscapes, rendering their precise characterization challenging. The rapidly growing fields of biophysical modeling and radiomics have shown promise in better characterizing the molecular, spatial, and temporal heterogeneity of tumors. Integrative analysis of CNS tumors, including clinically acquired multi-parametric magnetic resonance imaging (mpMRI) and the inverse problem of calibrating biophysical models to mpMRI data, assists in identifying macroscopic quantifiable tumor patterns of invasion and proliferation, potentially leading to improved (a) detection/segmentation of tumor subregions and (b) computer-aided diagnostic/prognostic/predictive modeling. This article presents a summary of (a) biophysical growth modeling and simulation,(b) inverse problems for model calibration, (c) these models' integration with imaging workflows, and (d) their application to clinically relevant studies. We anticipate that such quantitative integrative analysis may even be beneficial in a future revision of the World Health Organization (WHO) classification for CNS tumors, ultimately improving patient survival prospects.

60 APPLIED LIFE SCIENCES↗

AmeriFlux US-UR1 Boulder - UCRB

This is the AmeriFlux version of the carbon flux data for the site US-UR1 Boulder - UCRB. Site Description - This site is located in Boulder, Wyoming, in a high-altitude grassland ecosystem. The region experiences cold winters and mild summers, with relatively low precipitation throughout the year. Snowfall is common during the winter months, contributing to the seasonal water availability. The landscape is primarily covered by grass vegetation, with some areas supported by a center pivot irrigation system, which helps sustain plant growth in the dry environment.

Neale, C. U. [Daugherty Water for Food Global Inst↗

Guidance for Grid Resilience Decisions in Rural Minnesota

This report assesses the hazard landscape of the state of Minnesota, identifies weather hazards that are most impactful to the distribution system, includes a statewide assessment of household access to services dependent on reliable power, reviews resilience planning activities of electric utilities in Minnesota, and presents analysis of distribution grid performance in the face of extreme weather events with data from seven electric cooperatives dispersed throughout outstate Minnesota. This information is synthesized to provide considerations for resilience investment prioritization.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Amorphous and Crystalline H20 Ice at Rhea's Inktomi Crater

We present the analysis of Cassini spectral data from spectral mapping of Saturnian icy moons Dione and Rhea, to investigate possible effects of impact crater formation on the relative abundances of crystalline and amorphous water ice in the moons' ice crusts. Both moons display morphologically young ray craters as well as older craters. Possible changes in ice properties due to crater formation are conjectured to be more visible in younger craters, and as such Rhea's well imaged ray crater Inktomi is analysed, as are older craters for comparison. We used data from Cassini's Visual and Infrared Mapping Spectrometer (VIMS). For each pixel in the VIMS maps, spectral data were extracted in the near-infrared range (1.75 micrometers less than lambda less than 2.45 micrometers). Analysis was begun by fitting a single Gaussian to the peak in absorption at 2.0 micrometers, which was then subtracted from the data, leaving residuals with a minimum on either side of the original 2.0-micrometers band. The spectra of the individual spatial pixels were then clustered by the differences between these minima, which are sensitive to changes in both ice grain size and crystallinity. This yielded preliminary maps which approximated the physical characteristics of the landscape and were used to identify candidates for further analysis. Spectra were then clustered by the properties of the 1.5-micrometers band, to divide the map into regions based on inferred grain size. For each region, the predicted differences in minima from the Gaussian residuals, over a range of crystallinities, were calculated based on the found grain sizes. This model was used to find the crystallinity of each pixel via grain size and characteristics of the residual function. Preliminary results show a greater degree of crystallization of young crater interiors, particularly in Rhea's ray crater Inktomi, where ice showed crystalline ice abundances between 33 percent and 61 percent. These patterns in ice crystallization are possibly attributable to increased heat generated during crater formation.

Saturn Satellites↗

Population Viability Analysis (PVA) as a Platform for Predicting Outcomes of Management Options for the Florida Scrub-Jay in Brevard County

The Florida scrub-jay (FSJ) is a species in decline because of extinction debt caused by habitat fragmentation and degradation. Understanding and managing the species and its habitats is challenging due to the complex interactions among the social system, a dynamic mosaic of scrub habitat, and active management. To provide insights into the possible fates of the FSJ populations of mainland, cape, and island sections of Brevard County, we modeled the population dynamics using the Vortex population viability analysis (PVA) software. Vortex is an individual-based simulation that allowed us to include such factors as demographic rates dependent on habitat state, impact of helpers on breeding success, and helper to breeder transition probabilities responding to availability of nearby vacant optimal habitat and vacancies due to the death of breeders. Detailed modeling of the FSJ was possible only because a lot of data about the species and its habitats have been gathered over decades of intensive research. We followed a phased approach to constructing population models that incorporated the best available science and data to address a variety of conservation actions. The first phase focused on constructing a model that incorporates sociobiology and source-sink habitat dynamics. This model allowed us to address some of the most important questions about population size and habitat quality. Once the model framework was in place, we considered the real landscapes and actual local populations, rather than just generic representations of typical FSJ dynamics. After examining the viability of the metapopulations under current conditions, we explored the likely consequences of various management actions that might slow or reverse population declines.

Population Viability Analysis↗