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Ion exchange behavior of astatine and bismuth

Astatine and bismuth sorption on several ion exchange resins from nitric acid media has been studied. This work covers commercially available resins Dowex 50 × 4, MP thiol, Dowex 1 × 8, and TEVA. One of the main advantages of using ion exchangers for astatine separation and purification is the absence of any organic media in the effluent in comparison with extraction chromatography resins. The behavior of the above-mentioned metals was investigated in up to 4 M HNO 3 solutions. The determined distribution coefficients are greater than 1 for all the resins studied, reaching 10 4 for MP thiol and TEVA resins. The interaction of nitric acid with an anion exchanger in Cl-form results in an exchange reaction, where AtO + chloro complexes can form. To understand the astatine behavior under these conditions, stability constants of AtOCl and AtOCl 2 – complexes have been reevaluated and discrepancy in the literature values has been eliminated. For each resin a thermodynamic model has been developed to suggest a possible mechanism of astatine sorption. Literature and new experimental data on bismuth sorption by studying resins in nitric acid media have been reviewed and a mathematical model to describe its behavior has been suggested. Furthermore, a ratio of corresponding fit functions of At and Bi assigned to the same resin and acidity has been used to estimate the separation factors of these elements.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A novel construct for scaling groundwater–river interactions based on machine-guided hydromorphic classification

Hydrologic exchange between river channels and adjacent subsurface environments is a key process that influences water quality and ecosystem function in river corridors. Predictive numerical models are needed to understand responses of river corridors to environmental change and to support sustainable watershed management. We posit that systematic hydromorphic classification provides a scaling construct that facilitates extrapolation of outputs from local-scale mechanistic models to reduced-order models applicable at reach and watershed scales. This in turn offers the potential to improve large-scale predictions of river corridor hydrobiogeochemical processes. Here we present a new machine-guided hydromorphic classification methodology that addresses the key requirements of this objective, and we demonstrate its application to a segment of the Columbia River in the northwestern United States. The resulting hydromorphic classes form spatially coherent and physically interpretable hydromorphic units that exhibit distinct behaviors in terms of distributions of subsurface residence times (a primary control on critical biogeochemical reactions). This approach forms the basis of ongoing research that is evaluating the formulation of reduced-order models and transferability of results to other river reaches and larger scales.

54 ENVIRONMENTAL SCIENCES↗

Complex Fermi–Löwdin orbital self-interaction correction

Here, this paper introduces the use of complex Fermi orbital descriptors (FODs) in the Fermi–Löwdin self-interaction-corrected density functional theory (FLOSIC). With complex FODs, the Fermi–Löwdin orbitals (FLOs) that are used to evaluate the SIC correction to the total energy become complex. Complex FLO-SIC (cFLOSIC) calculations based on the local spin density approximation produce total energies that are generally lower than the corresponding energies found with FLOSIC restricted to real orbitals (rFLOSIC). The cFLOSIC results are qualitatively similar to earlier Perdew–Zunger SIC (PZ-SIC) calculations using complex orbitals. The energy lowering stems from the exchange–correlation part of the self-interaction correction. The Hartree part of the correction is more negative in rFLOSIC. The energy difference between real and complex solutions is greater for more strongly hybridized FLOs in atoms and for FLOs corresponding to double and triple bonds in molecules. The case of N2 is examined in detail to show the differences between the real and complex FLOs. We show that the complex triple-bond orbitals are simple, and physically appealing combinations of π and σ g orbitals that have not been discussed before. Consideration of complex FODs, and resulting unitary transformations, underscores the fact that FLO centroids are not necessarily good guesses for FOD positions in a FLOSIC calculation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Novel interaction interfaces mediate the interaction between the NEIL1 DNA glycosylase and mitochondrial transcription factor A

The maintenance of human mitochondrial DNA (mtDNA) is critical for proper cellular function as damage to mtDNA, if left unrepaired, can lead to a diverse array of pathologies. Of the pathways identified to participate in DNA repair within the mitochondria, base excision repair (BER) is the most extensively studied. Protein-protein interactions drive the step-by-step coordination required for the successful completion of this pathway and are important for crosstalk with other mitochondrial factors involved in genome maintenance. Human NEIL1 is one of seven DNA glycosylases that initiates BER in both the nuclear and mitochondrial compartments. In the current work, we scrutinized the interaction between NEIL1 and mitochondrial transcription factor A (TFAM), a protein that is essential for various aspects of mtDNA metabolism. We note, for the first time, that both the N- and C- terminal domains of NEIL1 interact with TFAM revealing a unique NEIL1 protein-binding interface. The interaction between the two proteins, as observed biochemically, appears to be transient and is most apparent at concentrations of low salt. The presence of DNA (or RNA) also positively influences the interaction between the two proteins, and molar mass estimates indicate that duplex DNA is required for complex formation at higher salt concentrations. Hydrogen deuterium exchange mass spectrometry data reveal that both proteins exchange less deuterium upon DNA binding, indicative of an interaction, and the addition of NEIL1 to the TFAM-DNA complex alters the interaction landscape. The transcriptional activity of TFAM appears to be independent of NEIL1 expression under normal cellular conditions, however, in the presence of DNA damage, we observe a significant reduction in the mRNA expression of TFAM-transcribed mitochondrial genes in the absence of NEIL1. Overall, our data indicate that the interaction between NEIL1 and TFAM can be modulated by local environment such as salt concentrations, protein availability, the presence of nucleic acids, as well as the presence of DNA damage.

59 BASIC BIOLOGICAL SCIENCES↗

Thresholds of Temperature and Time for Mars Sample Return: Final Report of The Mars Sample Return Temperature-Time Tiger Team

The time-temperature tiger team (T4) was chartered by NASA and ESA to evaluate the risks to the scientific return of the MSR samples if they are exposed to temperatures between +30 and +60 ⁰C for different amounts of time. This team consists of 13 scientists, who were selected based on their scientific background to represent the scientific disciplines that are expected to be the ones that will be the most affected if such heating were to happen. The expertise of the team will help to understand whether exposing the MSR samples to temperatures between +30 and +60 ⁰C will pose any risk to the sample integrity and therefore, to future scientific investigations. Key processes identified by the T4 were: the release of volatiles by desorption and sublimation and release from condensed phases (interiors, decomposition, dehydration); chemical reactions including gas-gas and gas-solid; deliquescence of hygroscopic salts; acid/base interactions (potential for extreme pH conditions); aqueous redox reactions, isotopic exchange (aqueous phases, minerals, gasses, organic phases); condensation and freezing (in the after-heating cooling phase) and interactions with the sample tube materials. There is potential for multiple interactions and overlapping effects. For inorganic materials and the records they represent, over both long time scales (hours to days) and short time scales (minutes to hours) no temperature excursion above +30 °C could be accommodated without loss of science (Figure 1.1). While there will be some robust constituents (feldspars, quartz, pyroxenes, etc.) that are unaffected, there will also be some less robust constituents (salts, phyllosilicates, radicals, etc.) that are affected across all temperature ranges ≤60 °C. For organic materials, in particular organic biosignatures, the risks reflect that preservation is reliant on a number of processes, and a change in one component within a sample tube can affect another. For organic materials, over long timescales of hours to days no temperature excursion above +30 °C could be accommodated without loss of science, but over shorter time scales (minutes to hours), raising the temperature to 40 °C could be manageable without major disruption to science, whereas temperatures above 40 °C would lead to significant losses. The consideration of these findings by the MSR team will help to maintain the fidelity of samples returned from Mars in the future and maximize scientific return when analyzed in Earth laboratories.

Mark A Sephton↗

Probing interspecies metabolic interactions within a synthetic binary microbiome using genome-scale modeling

Metabolic interactions within a microbial community play a key role in determining the structure, function, and composition of the community. However, due to the complexity and intractability of natural microbiomes, limited knowledge is available on interspecies interactions within a community. In this work, using a binary synthetic microbiome, a methanotroph-photoautotroph (M-P) coculture, as the model system, we examined different genome-scale metabolic modeling (GEM) approaches to gain a better understanding of the metabolic interactions within the coculture, how they contribute to the enhanced growth observed in the coculture, and how they evolve over time. Using batch growth data of the model M-P coculture, we compared three GEM approaches for microbial communities. Two of the methods are existing approaches: SteadyCom, a steady state GEM, and dynamic flux balance analysis (DFBA) Lab, a dynamic GEM. We also proposed an improved dynamic GEM approach, DynamiCom, for the M-P coculture. SteadyCom can predict the metabolic interactions within the coculture but not their dynamic evolutions; DFBA Lab can predict the dynamics of the coculture but cannot identify interspecies interactions. DynamiCom was able to identify the cross-fed metabolite within the coculture, as well as predict the evolution of the interspecies interactions over time. A new dynamic GEM approach, DynamiCom, was developed for a model M-P coculture. Constrained by the predictions from a validated kinetic model, DynamiCom consistently predicted the top metabolites being exchanged in the M-P coculture, as well as the establishment of the mutualistic N-exchange between the methanotroph and cyanobacteria. The interspecies interactions and their dynamic evolution predicted by DynamiCom are supported by ample evidence in the literature on methanotroph, cyanobacteria, and other cyanobacteria-heterotroph cocultures.

59 BASIC BIOLOGICAL SCIENCES↗

The role of charge exchange in the solar wind absorption by Venus

The amount of solar wind absorbed because of charge exchange processes in the dayside ionosheath of Venus is calculated. The calculations suggest the existence of a lower limiting ionopause altitude, below which all solar wind particles are removed from the flow by charge exchange. The cold, slow ions resulting from this interaction are thought to play an important role in building the magnetic barrier observed just outside the ionopause and in creating the dayside 'mantle' and downstream 'penumbra' regions. The total absorption caused by charge exchange is typically 2-5%, although when the solar wind dynamic pressure is very high, it can reach 16%.

Gombosi, T. I.↗

Command Generation and Control of Momentum Exchange Electrodynamic Reboost Tethered Satellite

The research completed for this NASA Graduate Student Research Program Fellowship sought to enhance the current state-of-the-art dynamic models and control laws for Momentum Exchange Electrodynamic Reboost satellite systems by utilizing command generation, specifically Input Shaping. The precise control of tethered spacecraft with flexible appendages is extremely difficult. The complexity is magnified many times when the satellite must interact with other satellites as in a momentum exchange via a tether. The Momentum Exchange Electronic Reboost Tether (MXER) concept encapsulates all of these challenging tasks [l]. Input Shaping is a command generation technique that allows flexible spacecraft to move without inducing residual vibration [2], limit transient deflection [3] and utilize fuel-efficient actuation [4]. Input shaping is implemented by convolving a sequence of impulses, known as the input shaper, with a desired system command to produce a shaped input that is then used to drive the system. This process is demonstrated in Figure 1. The shaped command is then use to drive the system without residual vibration while meeting many other performance specifications. The completed work developed tether control algorithms for retrieval. A simple model of the tether response has been developed and command shaping was implemented to minimize unwanted dynamics. A model of a flexible electrodynamic tether has been developed to investigate the tether s response during reboost. Command shaping techniques have been developed to eliminate the tether oscillations and reduce the tether s deflection to pre-specified levels during reboost. Additionally, a model for the spin-up of a tethered system was developed. This model was used in determining the parameters for optimization the resulting angular velocity.

Robertson, Michael J.↗

Electronic structure of mononuclear Cu-based molecule from density-functional theory with self-interaction correction

In this paper, we investigate the electronic structure of a planar mononuclear Cu-based molecule [Cu(C 6 H 4 S 2 ) 2 ] z in two oxidation states ( z = –2, –1) using density-functional theory (DFT) with Fermi–Löwdin orbital (FLO) self-interaction correction (SIC). The dianionic Cu-based molecule was proposed to be a promising qubit candidate. Self-interaction error within approximate DFT functionals renders severe delocalization of electron and spin densities arising from 3 d orbitals. The FLO-SIC method relies on optimization of Fermi–Löwdin orbital descriptors (FODs) with which localized occupied orbitals are constructed to create SIC potentials. Starting with many initial sets of FODs, we employ a frozen-density loop algorithm within the FLO-SIC method to study the Cu-based molecule. We find that the electronic structure of the molecule remains unchanged despite somewhat different final FOD configurations. In the dianionic state (spin S = 1/2), FLO-SIC spin density originates from the Cu d and S p orbitals with an approximate ratio of 2:1, in quantitative agreement with multireference calculations, while in the case of SIC-free DFT, the orbital ratio is reversed. Overall, FLO-SIC lowers the energies of the occupied orbitals and, in particular, the 3 d orbitals unhybridized with the ligands significantly, which substantially increases the energy gap between the highest occupied molecular orbital (HOMO) and the lowest unoccupied molecular orbital (LUMO) compared to SIC-free DFT results. The FLO-SIC HOMO–LUMO gap of the dianionic state is larger than that of the monoanionic state, which is consistent with experiment. Our results suggest a positive outlook of the FLO-SIC method in the description of magnetic exchange coupling within 3 d -element-based systems.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Kullback–Leibler Divergence of an Open-Queuing Network of a Cell-Signal-Transduction Cascade

Queuing networks (QNs) are essential models in operations research, with applications in cloud computing and healthcare systems. However, few studies have analyzed the cell’s biological signal transduction using QN theory. This study entailed the modeling of signal transduction as an open Jackson’s QN (JQN) to theoretically determine cell signal transduction, under the assumption that the signal mediator queues in the cytoplasm, and the mediator is exchanged from one signaling molecule to another through interactions between the signaling molecules. Each signaling molecule was regarded as a network node in the JQN. The JQN Kullback–Leibler divergence (KLD) was defined using the ratio of the queuing time (λ) to the exchange time (μ), λ/μ. The mitogen-activated protein kinase (MAPK) signal-cascade model was applied, and the KLD rate per signal-transduction-period was shown to be conserved when the KLD was maximized. Our experimental study on MAPK cascade supported this conclusion. This result is similar to the entropy-rate conservation of chemical kinetics and entropy coding reported in our previous studies. Thus, JQN can be used as a novel framework to analyze signal transduction.

97 MATHEMATICS AND COMPUTING↗

Quantifying the phase diagram and Hamiltonian of S = 1/2 kagome antiferromagnets: bridging theory and experiment

Spin-1/2 kagome antiferromagnets are leading candidates for realizing quantum spin liquid (QSL) ground states. While QSL ground states are predicted for the pure Heisenberg model, understanding the robustness of the QSL to additional interactions that may be present in real materials is a forefront question in the field. Here we employ large-scale density-matrix renormalization group simulations to investigate the effects of next-nearest neighbor exchange couplings J 2 and Dzyaloshinskii-Moriya interactions D, which are relevant to understanding the prototypical kagome materials herbertsmithite and Zn-barlowite. By utilizing clusters as large as XC12 and extrapolating the results to the thermodynamic limit, we precisely delineate the scope of the QSL phase, which remains robust across an expanded parameter range of J 2 and D. Direct comparison of the simulated static and dynamic spin structure factors with inelastic neutron scattering reveals the parameter space of the Hamiltonians for herbertsmithite and Zn-barlowite, and, importantly, provides compelling evidence that both materials exist within the QSL phase. These results establish a powerful convergence of theory and experiment in this most elusive state of matter.

Jiang, Shengtao [SLAC National Accelerator Laborat↗

Dynamical interactions between the middle atmosphere and thermosphere

Based on modeling some interactions between the middle atmosphere and thermosphere are presented. The interactions studied include the thermospheric circulations driven by radiative and auroral heating affecting the O concentration and temperature of the upper mesosphere through the exchange of chemical energy. Considering Kellog's mechanism, an interaction between the mesosphere and thermosphere that is driven by Joule heating is discussed.

Mayr, H. G.↗

Modeling Ultraviolet Emissions Near Io

In this report, we describe work awarded to Science Applications International Corporation, for the period 6/l/99 to 5/31/00. During this time period, we have investigated the interaction of Io, Jupiter's innermost Galilean satellite, with the Io plasma torus, and the role this interaction plays in producing ultraviolet (UV) emissions from neutral oxygen and sulfur. Io, the innermost of Jupiter's Galilean satellites, plays a unique role in the jovian magnetosphere. Neutral material that escapes from Io is ionized to form the lo torus, a dense, heavy-ion plasma that corotates with Jupiter and interacts with Io. Io supplies not only the torus, but is a major source of plasma for the entire magnetosphere. Ionization and charge-exchange of neutrals near lo strongly influences the plasma interaction, and Io's neutral atmosphere plays an important role in the generation of currents that couple Io to Jupiter. There have been no in situ measurements of the neutral density near Io, but remote observations of neutrals near lo have been performed for many years. Recent observations from the Hubble Space Telescope (HST) have shown detailed structure in UV emissions from neutral species near Io. Electron-impact of the neutrals by the Io torus plasma is the primary mechanism responsible for exciting these emissions. Previously, we have modeled the Io plasma environment using three-dimensional magnetohydrodynamic (MHD) simulations, and we have shown that the interaction between Io and the plasma torus plays an important role in producing the morphology of the observed emissions. In the past year, we have extended these studies to use both UV observations and Galileo particle and field measurements to investigate the Io interaction.

Linker, Jon A.↗

Integrating Upper Class E Traffic Management (ETM) Operations into the National Airspace System: Use Cases and Research Questions

As new categories of vehicles are introduced in the National Airspace System, so too are novel concepts for a cooperative approach to traffic management environments. One of these new environments, Upper Class E Traffic Management (ETM), is expected to include a variety of high altitude, long endurance vehicles with a range of performance capabilities and mission profiles that operate in cooperative areas above 60,000 feet. In addition to developing the rules, architecture, and systems for operations within the ETM environment itself, it is also important to consider how ETM vehicles will integrate with traditional Air Traffic Management and interact with Air Traffic Control (ATC) as they traverse ATC-controlled airspace and transition in and out of cooperative ETM operating areas. As a first step toward future ETM demonstrations at the National Aeronautics and Space Administration (NASA) Ames Research Center’s Airspace Operations Laboratory, use cases with step-by-step procedures were developed to identify both nominal and off-nominal scenarios in which ETM operations will interact with ATC. As NASA prepares to develop a simulation platform to demonstrate ETM cooperative practices and ETM-ATC interactions, the procedures, ATC roles and responsibilities, data exchange requirements, and research questions that were identified as part of use case development will inform scenario and system architecture design. The upcoming simulation work will include initial prototype ETM-ATC coordination tools to support ATC controllers’ interactions with ETM operations. This paper will briefly discuss NASA’s upcoming ETM development work and then provide background on ETM-ATC interactions, describe each ETM-ATC interaction use case, and discuss open questions on concept, procedures, and assumptions.

ATC↗

Integrating Upper Class E Traffic Management (ETM) Operations into the National Airspace System: Use Cases and Research Questions

As new categories of vehicles are introduced in the National Airspace System, so too are novel concepts for a cooperative approach to traffic management environments. One of these new environments, Upper Class E Traffic Management (ETM), is expected to include a variety of high altitude, long endurance vehicles with a range of performance capabilities and mission profiles that operate in cooperative areas above 60,000 feet. In addition to developing the rules, architecture, and systems for operations within the ETM environment itself, it is also important to consider how ETM vehicles will integrate with traditional Air Traffic Management and interact with Air Traffic Control (ATC) as they traverse ATC-controlled airspace and transition in and out of cooperative ETM operating areas. As a first step toward future ETM demonstrations at the National Aeronautics and Space Administration (NASA) Ames Research Center’s Airspace Operations Laboratory, use cases with step-by-step procedures were developed to identify both nominal and off-nominal scenarios in which ETM operations will interact with ATC. As NASA prepares to develop a simulation platform to demonstrate ETM cooperative practices and ETM-ATC interactions, the procedures, ATC roles and responsibilities, data exchange requirements, and research questions that were identified as part of use case development will inform scenario and system architecture design. The upcoming simulation work will include initial prototype ETM-ATC coordination tools to support ATC controllers’ interactions with ETM operations. This paper will briefly discuss NASA’s upcoming ETM development work and then provide background on ETM-ATC interactions, describe each ETM-ATC interaction use case, and discuss open questions on concept, procedures, and assumptions.

ATC↗

Application of Recursive Estimation to Heat Tracing for Groundwater/Surface‐Water Exchange

Abstract We present and demonstrate a recursive‐estimation framework to infer groundwater/surface‐water exchange based on temperature time series collected at different vertical depths below the sediment/water interface. We formulate the heat‐transport problem as a state‐space model (SSM), in which the spatial derivatives in the convection/conduction equation are approximated using finite differences. The SSM is calibrated to estimate time‐varying specific discharge using the Extended Kalman Filter (EKF) and Extended Rauch‐Tung‐Striebel Smoother (ERTSS). Whereas the EKF is suited to real‐time (“online”) applications and uses only the past and current measurements for estimation (filtering), the ERTSS is intended for near‐real time or batch‐processing (“offline”) applications and uses a window of data for batch estimation (smoothing). The two algorithms are demonstrated with synthetic and field‐experimental data and are shown to be efficient and rapid for the estimation of time‐varying flux over seasonal periods; further, the recursive approaches are effective in the presence of rapidly changing flux and (or) nonperiodic thermal boundary conditions, both of which are problematic for existing approaches to heat tracing of time‐varying groundwater/surface‐water exchange.

54 ENVIRONMENTAL SCIENCES↗

Prospects of Detecting Nonthermal Protons in Solar Flares via Lyman Line Spectroscopy: Revisiting the Orrall-Zirker Effect

Solar flares are efficient particle accelerators, with a substantial fraction of the energy released manifesting as nonthermal particles. While the role that nonthermal electrons play in transporting flare energy is well studied, the properties and importance of nonthermal protons are rather less well understood. This is in large part due to the paucity of diagnostics, particularly at the lower-energy (deka-keV) range of nonthermal proton distributions in flares. One means to identify the presence of deka-keV protons is by an effect originally described by Orrall & Zirker. In the Orrall–Zirker effect, nonthermal protons interact with ambient neutral hydrogen, and via charge exchange produce a population of energetic neutral atoms (ENAs) in the chromosphere. These ENAs subsequently produce an extremely redshifted photon in the red wings of hydrogen spectral lines. We revisit predictions of the strength of this effect using modern interaction cross sections, and numerical models capable of self-consistently simulating the flaring nonequilibrium ionization stratification, and the nonthermal proton distribution (and, crucially, their feedback on each other). We synthesize both the thermal and nonthermal emission from Ly α and Ly β, the most promising lines that may exhibit a detectable signal. These new predictions are weaker and more transient than prior estimates, but the effects should be detectable in fortuitous circumstances. We degrade the Ly β emission to the resolution of the Spectral Imaging of the Coronal Environment (SPICE) instrument on board Solar Orbiter, demonstrating that though likely difficult, it should be possible to detect the presence of nonthermal protons in flares observed by SPICE.

Solar flares↗