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Technical note: AQMEII4 Activity 1: evaluation of wet and dry deposition schemes as an integral part of regional-scale air quality models

We present in this technical note the research protocol for phase 4 of the Air Quality Model Evaluation International Initiative (AQMEII4). This research initiative is divided into two activities, collectively having three goals: (i) to define the current state of the science with respect to representations of wet and especially dry deposition in regional models, (ii) to quantify the extent to which different dry deposition parameterizations influence retrospective air pollutant concentration and flux predictions, and (iii) to identify, through the use of a common set of detailed diagnostics, sensitivity simulations, model evaluation, and reduction of input uncertainty, the specific causes for the current range of these predictions. Activity 1 is dedicated to the diagnostic evaluation of wet and dry deposition processes in regional air quality models (described in this paper), and Activity 2 to the evaluation of dry deposition point models against ozone flux measurements at multiple towers with multiyear observations (to be described in future submissions as part of the special issue on AQMEII4). The scope of this paper is to present the scientific protocols for Activity 1, as well as to summarize the technical information associated with the different dry deposition approaches used by the participating research groups of AQMEII4. In addition to describing all common aspects and data used for this multi-model evaluation activity, most importantly, we present the strategy devised to allow a common process-level comparison of dry deposition obtained from models using sometimes very different dry deposition schemes. The strategy is based on adding detailed diagnostics to the algorithms used in the dry deposition modules of existing regional air quality models, in particular archiving diagnostics specific to land use–land cover (LULC) and creating standardized LULC categories to facilitate cross-comparison of LULC-specific dry deposition parameters and processes, as well as archiving effective conductance and effective flux as means for comparing the relative influence of different pathways towards the net or total dry deposition. This new approach, along with an analysis of precipitation and wet deposition fields, will provide an unprecedented process-oriented comparison of deposition in regional air quality models. Examples of how specific dry deposition schemes used in participating models have been reduced to the common set of comparable diagnostics defined for AQMEII4 are also presented.

54 ENVIRONMENTAL SCIENCES↗

Assessment of Updraft Modeling Bias Using Computational Fluid Dynamics

Golden Eagle (Aquila chrysaetos) habitats may overlap with wind energy development in some regions of the US. Eagles, and similar soaring bird species, are therefore at risk of collision with wind turbines when flying through wind farms. Recently developed behavioral modeling approaches can predict the presence of eagles near turbines within the rotor-swept layer but require reliable prediction of atmospheric flowfield conditions. In particular, the vertical component of the wind speed dictates a soaring bird's ability to maintain or gain altitude, since they rely on updrafts to subsidize their flight. In this work, we investigate the atmospheric conditions around a wind farm in complex terrain and compare methods for atmospheric characterization. We use computational fluid dynamics (specifically, large-eddy simulations, or LES) to simulate the atmospheric boundary layer over a region encompassing multiple wind farms with high temporal and spatial resolution (seconds and 10's of meters, respectively). We compare traditional non-simulation-based methods of determining the orographic updraft potential based on wind direction, terrain slope and aspect, with the flowfields from LES that include both orographic updrafts alone and combined thermal and orographic updrafts. Preliminary analysis suggests that although the model captures the horizontal pattern of vertical updrafts, their magnitude can be improved with information about the surface heat flux, which is usually correlated with time of the day. Within our study region, we found that the low-fidelity model may over- or underestimate updraft potential by up to 400% at 80 m AGL, depending on local orographic features. This can result in an inaccurate representation of eagle presence and, consequently, risk. Another important finding is that flowfield time-averaging can hide important details about the flight environment, including how thermally generated flow structures within the atmospheric boundary layer (e.g., convective rolls and/or cells) may be important drivers of eagle flight.

atmospheric turbulence↗

First results from the search of $ν_μ$ disappearance with ICARUS

his work presents a search for muon neutrino disappearance signal using the ICARUS detector. ICARUS is currently working as the far detector of the Short-Baseline Neutrino (SBN) program. Its main goal is to investigate the possible oscillation of a sterile neutrino state ($\Delta m^2 \sim \text{eV}^2$), that would drive short baseline oscillations at the scale of L/E $\sim$ km/GeV. Neutrino interactions from the Booster Neutrino Beam (BNB) are investigated, looking for simple final state topology with a single muon and at least one proton (1$\mu$Np). This analysis tests the 3+1 model using the two flavor neutrino approximation, where careful consideration has been given to the systematic uncertainties arising from flux, neutrino interaction, and detector models. No statistically significant $\nu_\mu$ disappearance is observed, hence 90\% C.L. exclusion contours are reported in the $\Delta m^2_{41} - \sin^22\theta_{\mu\mu}$ parameter space.

Artero Pons, Maria [INFN, Padua; U. Padua (main)]↗

A machine learning approach to emulation and biophysical parameter estimation with the Community Land Model, version 5

Abstract. Land models are essential tools for understanding and predicting terrestrial processes and climate–carbon feedbacks in the Earth system, but uncertainties in their future projections are poorly understood. Improvements in physical process realism and the representation of human influence arguably make models more comparable to reality but also increase the degrees of freedom in model configuration, leading to increased parametric uncertainty in projections. In this work we design and implement a machine learning approach to globally calibrate a subset of the parameters of the Community Land Model, version 5 (CLM5) to observations of carbon and water fluxes. We focus on parameters controlling biophysical features such as surface energy balance, hydrology, and carbon uptake. We first use parameter sensitivity simulations and a combination of objective metrics including ranked global mean sensitivity to multiple output variables and non-overlapping spatial pattern responses between parameters to narrow the parameter space and determine a subset of important CLM5 biophysical parameters for further analysis. Using a perturbed parameter ensemble, we then train a series of artificial feed-forward neural networks to emulate CLM5 output given parameter values as input. We use annual mean globally aggregated spatial variability in carbon and water fluxes as our emulation and calibration targets. Validation and out-of-sample tests are used to assess the predictive skill of the networks, and we utilize permutation feature importance and partial dependence methods to better interpret the results. The trained networks are then used to estimate global optimal parameter values with greater computational efficiency than achieved by hand tuning efforts and increased spatial scale relative to previous studies optimizing at a single site. By developing this methodology, our framework can help quantify the contribution of parameter uncertainty to overall uncertainty in land model projections.

54 ENVIRONMENTAL SCIENCES↗

Edge localized mode characteristics and divertor heat flux during stationary and transient phase for CFETR hybrid scenario

The study of edge localized mode (ELM) behavior, stationary heat flux and transient heat flux during the ELM crash phase is performed for a China Fusion Engineering Test Reactor (CFETR) 1 GW hybrid mode operation scenario ($R$ = 7.2 m, ${B_{\text{T}}}$ = 6.5 T, ${I_{\text{p}}}$ = 13.78 MA). Modeling and simulation start with a scenario obtained by multi-code integrated modeling on the one modeling framework for integrated tasks framework. Linear stability and nonlinear simulations of ELM dynamics are carried out using the BOUT++ six-field reduced magnetohydrodynamic module, which show a much smaller ELM energy loss (Δ ELM ~ 0.13%) compared to that of a Type-I ELM. Parametric analysis of the weak linear growth rate and small ELM energy loss characteristics shed light on physics corresponding to a grassy ELM regime for CFETR 1 GW hybrid scenario. The transient heat flux on the divertor target during this small ELM phase is investigated using BOUT++. Here we found that upstream radial transport in the scrape-off-layer (SOL) induced by small ELMs is weak, which keeps it in the drift-dominated region. However, the heat flux width is still broadened to ${\lambda _{\text{q}}}$ = 4.64 mm by the increase of separatrix temperature during ELM nonlinear evolution. The impact of transient peak heat load and ELM energy fluence on tungsten melting and net erosion rate of divertor target is evaluated for the first-time using physics-based transport that connects the pedestal with the SOL. Energy fluence caused by a single ELM pulse is below the tungsten melting limit, while tungsten erosion would exceed the material requirements. We conclude that external mitigation methods, such as divertor detachment and advanced divertor geometry are likely needed for the steady state operation of CFETR.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Gyrokinetic analysis of inter-edge localized mode transport mechanisms in a DIII-D pedestal

In this study, gyrokinetic simulations are used to study pedestal fluctuations for DIII-D discharge 174082 using the GENE code. Nonlinear local simulations indicate that electron heat flux has contributions from electron temperature gradient-driven transport but at levels insufficient to satisfy power balance. We show that microtearing modes (MTM) and neoclassical transport are likely to account for the remaining observed energy losses in the electron and ion channels, respectively. The MTM instabilities found in the simulations are consistent with the high-frequency fluctuations identified in the magnetic fluctuation data from Mirnov coils. The fluctuation data in this discharge also exhibit a low-frequency band of fluctuations. By modifying the equilibrium profiles and plasma β, simulations produce MHD modes, which may be responsible for these observed low-frequency fluctuations. We compare several metrics involving ratios of fluctuation amplitudes and transport quantities for both MTMs and MHD modes. This analysis suggests that the available data are consistent with the simultaneous activity of both MHD modes and MTMs provided that the former is limited largely to the particle transport channel.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Thermal and structural analysis of a new WEST reciprocating probe head with Titanium-Zirconium-Molybdenum armour material

The Tore Supra tokamak was transformed into an X-point divertor fusion device in the frame of the WEST (W-for tungsten-Environment in Steady-state Tokamak) project, launched in support of the ITER tungsten divertor strategy. WEST began operation in 2017. A new reciprocating probe head, equipped with a Titanium-Zirconium-Molybdenum (TZM) heat shield, was recently built and operated on WEST during the C9 Campaign in early 2024. TZM was chosen as armour material for its very good mechanical properties between 700 °C and 1400 °C. This material was already extensively used for probe heads and other plasma facing components on the Alcator C-Mod tokamak. Here, this paper presents the design of the new WEST probe head. It is equipped with tungsten filaments that can be heated to emit electrons and provide a direct measurement of the plasma potential in the scrape-off layer, and it is also equipped with a pair of Langmuir probes. The probe plunges vertically into the plasma, reaches its maximum dive depth, then returns to its protected resting position in about 0.25 s. Thermal loads are calculated using as input the thermal properties of TZM and radial profiles of the heat flux measured in the past by other reciprocating probes, and scaled upwards to the expected heat loads in the WEST scrape-off layer. An analytical estimation of Electromagnetic (EM) loads will also be presented, as well as a thermal and structural analysis of the probe for 15 cycles at maximum plunge depth. The probe is observed by an infrared camera. Comparisons between the heat flux deduced by the Langmuir probe and the infrared radiance of the probe housing during plasma exposure are finally presented.

Diagnostic↗

Impact of cross-section uncertainties on supernova neutrino spectral parameter fitting in the Deep Underground Neutrino Experiment

A primary goal of the upcoming Deep Underground Neutrino Experiment (DUNE) is to measure the 𝒪⁡(10) MeV neutrinos produced by a Galactic core-collapse supernova if one should occur during the lifetime of the experiment. The liquid-argon-based detectors planned for DUNE are expected to be uniquely sensitive to the 𝜈 𝑒 component of the supernova flux, enabling a wide variety of physics and astrophysics measurements. A key requirement for a correct interpretation of these measurements is a good understanding of the energy-dependent total cross section 𝜎⁡(𝐸 𝜈 ) for charged-current 𝜈 𝑒 absorption on argon. In the context of a simulated extraction of supernova 𝜈 𝑒 spectral parameters from a toy analysis, we investigate the impact of 𝜎⁡(𝐸 𝜈 ) modeling uncertainties on DUNE’s supernova neutrino physics sensitivity for the first time. We find that the currently large theoretical uncertainties on 𝜎⁡(𝐸 𝜈 ) must be substantially reduced before the 𝜈𝑒 flux parameters can be extracted reliably; in the absence of external constraints, a measurement of the integrated neutrino luminosity with less than 10% bias with DUNE requires 𝜎⁡(𝐸 𝜈 ) to be known to about 5%. The neutrino spectral shape parameters can be known to better than 10% for a 20% uncertainty on the cross-section scale, although they will be sensitive to uncertainties on the shape of 𝜎⁡(𝐸 𝜈 ). A direct measurement of low-energy 𝜈𝑒-argon scattering would be invaluable for improving the theoretical precision to the needed level.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Refining water and carbon fluxes modeling in terrestrial ecosystems via plant hydraulics integration

Plant hydraulics substantially affects terrestrial water and carbon cycles by modulating water transport and carbon assimilation. Despite improved drought simulations in certain ecosystems through their integration into land surface models (LSMs), the broader application of plant hydraulics in diverse ecosystems and hydroclimates is still underexplored. Here, in this study, we implemented the recently developed Noah-Multiparameterization Land Surface Model (Noah-MP LSM) equipped with a plant hydraulics scheme (Noah-MP-PHS) across 40 FLUXNET sites globally. Employing the Shuffled Complex Evolution-University of Arizona (SCE-UA) auto-calibration algorithm, we optimized key plant hydraulics parameters for these sites spanning eight vegetation types in both arid and humid climates. Noah-MP-PHS significantly improves the simulation of evapotranspiration (ET) and gross primary production (GPP) by better representing atmospheric and soil water stress compared to traditional soil hydraulic schemes (SHSs, such as Noah and CLM). The augmented Noah-MP-PHS models reduce surface flux overestimation and underestimation, exhibiting an average increase of 0.14 and 0.15 in Kling-Gupta Efficiency (KGE) compared to Noah and CLM, respectively. The explicit consideration of plant capacitance in PHS reveals substantial deep-layer and nocturnal root water uptake especially under dry conditions. We employed eXplainable Machine learning (XML) to quantify the model’s relative sensitivity to newly introduced leaf-, stem and root-related parameters in PHS. The sensitivity analysis reveals a rise in root parameter importance and a decline in leaf and stem parameters as conditions shift from humid to arid. These findings indicate that as aridity states vary, the most influential parameters affecting surface fluxes variation may change in parameter calibration for PHS applications. Our findings underscore the importance of incorporating plant hydraulics into LSMs to enhance simulations of terrestrial water and carbon dynamics. These findings are crucial for understanding ecosystem responses to global climate changes and guide the broader application of PHS at larger scales.

54 ENVIRONMENTAL SCIENCES↗

As-Run Physics Analysis for the AGC-4 Experiment Irradiated in the ATR

This Engineering Calculations Analysis Report (ECAR) documents the results of the Advanced Test Reactor (ATR) detailed physics analyses performed to calculate the displacements per atom (DPA) and the fast neutron fluence (E > 0.1 MeV) of the Advanced Graphite Creep (AGC) experiment, AGC-4, irradiated in the ATR East Flux Trap (EFT) (see Figure 1) during ATR Cycle 157D, 158A, 162A, 162B, 164A, 164B, 166A, and Cycle 166B. This ECAR also reports the neutron and photon heat rates for the materials of the AGC-4 experiment for ATR Cycle 158A (timestep 19), which provides to the maximum heating. The results for these evaluations and analysis are reported herein. The AGC-4 as-run specimen neutron fast fluence (E > 0.1 MeV), DPA, and material heat rate calculations were performed using a general-purpose Monte Carlo N-Particle (MCNP) code. All calculated results are tabulated herein.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

A standard capsule design for structural material testing in the Advanced Test Reactor

Nuclear materials testing is commonly completed in various material test and research reactors throughout the world, including the Advanced Test Reactor (ATR), but the current capsule design, analysis, and fabrication process can take years to complete. To decrease the costs and time associated with materials testing, a standard capsule has been designed which houses various specimen geometries and allows irradiation in virtually any ATR test position. The standard capsule features locking end caps which connect and lock together to form the capsule stack, eliminating the need for a basket and maximizing the quantity of specimens which are contained within the capsule. A customizable internal gas gap provides thermal resistance between the specimens and reactor coolant, making specimen temperatures from approximately 370 to 1000 K achievable. The flexibility of the capsule design allows experimenters to choose irradiation positions based off desired neutron flux, with typical fluences per cycle ranging from 8.8x10 19 to 2.3x10 21 n/cm 2 , depending on experiment position. Here this paper presents and discusses the standard capsule design and analysis.

36 MATERIALS SCIENCE↗

Nuclear Software Validation for 7% Enriched UO 2 Fuel Lattices

This analysis performs validation for the Virtual Environment for Reaction Application’s (VERA’s) neutronics codes MPACT and Shift against measured data from the Seven Percent Critical Experiment (7uPCX) at Sandia National Laboratory. The benchmarking supports the future application of VERA for analysis of high-assay low-enriched uranium (HALEU) fuel in commercial pressurized water reactors (PWRs). VERA demonstrates very good agreement with measured data, and the deterministic code MPACT also agrees very well with higher-fidelity stochastic methods KENO-VI and Shift in both total neutron flux and fission rate distribution comparisons. Despite some significant differences between the 7uPCX and existing commercial PWRs that challenge the neutron cross section data and transport solver methods used by MPACT, all of the results are excellent. The agreement increases the confidence in the applicability and accuracy of VERA for reactor analysis of HALEU fuels in commercial reactors.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Genome-scale modelling of the primary-specialized metabolism interface

Environmental challenges and development require plants to reallocate resources between primary and specialized metabolites to survive. Genome-scale metabolic models, which map carbon flux through metabolic pathways, are a valuable tool in the study of tradeoffs that arise at this interface. Due to annotation gaps, models that characterize all the enzymatic steps in individual specialized pathways and their linkages to each other and to central carbon metabolism are difficult to construct. Recent studies have successfully curated subsystems of specialized metabolism and characterized the interfaces where flux is diverted to the precursors of glucosinolates, terpenes, and anthocyanins. Although advances in metabolite profiling can help to constrain models at this interface, quantitative analysis remains challenging because of the different timescales on which specialized metabolites from constitutive and reactive pathways accumulate.

59 BASIC BIOLOGICAL SCIENCES↗

Quantitative decoding of coupled carbon and energy metabolism in Pseudomonas putida for lignin carbon utilization

Soil Pseudomonas species, which thrive on lignin derivatives, are widely explored for biotechnology applications in lignin valorization. However, how the native metabolism coordinates phenolic carbon processing with required cofactor generation remains poorly understood. Here, we achieve quantitative understanding of this metabolic balance through a detailed multi-omics investigation of Pseudomonas putida KT2440 grown on four common phenolic acid substrates: ferulate, p-coumarate, vanillate, and 4-hydroxybenzoate. Relative to succinate, proteomics reveals > 140-fold increase in transport and catabolic proteins for aromatics, but metabolomics identifies bottlenecks in initial catabolism to maintain favorable cellular energy charge, which is compromised in mutants with resolved bottlenecks. Up to 30-fold increase in pyruvate carboxylase and glyoxylate shunt proteins implies a metabolic remodeling confirmed by kinetic 13 C-metabolomics. Quantitative analysis by 13 C-fluxomics demonstrates coupling of this remodeling with cofactor production. Specifically, anaplerotic carbon recycling through pyruvate carboxylase promotes tricarboxylic acid cycle fluxes to generate 50-60% NADPH yield and 60-80% NADH yield, resulting in up to 6-fold greater ATP surplus than with succinate metabolism; the glyoxylate shunt sustains cataplerotic flux through malic enzyme for the remaining NADPH yield. This quantitative blueprint affords cofactor imbalance predictions in proposed engineering of key metabolic nodes in lignin valorization pathways.

09 BIOMASS FUELS↗

Probing Systematic Bias in Low-redshift Type Ia Supernova Measurements by Cross Analyzing Surface Brightness and Hubble Residuals

For low-redshift (z < 0.1) SN Ia samples used in several cosmological analyses over the past decade, we probe for systematic bias by looking for correlations between surface brightness (SB) measurements and Hubble residuals (HR). For 292 SNe Ia, we measure SB at the location of the SN Ia from publicly available Pan-STARRS (PS1) images. The Hubble residuals are from two recent measurements with low-z SNe Ia that overlap the PS1 footprint: (1) the DES 3 yr cosmology analysis, with 120 overlapping low-z SNe Ia from the Harvard-Smithsonian Center for Astrophysics surveys and Carnegie Supernova Project, and (2) the PS1 single-telescope analysis, with 172 overlapping low-z SNe Ia from the Foundation Supernova Survey. This study is motivated by previous reports of anomalous inefficiencies and flux scatter for transients on bright galaxies. Here, we compare HR distributions of the bright and faint halves of the SB distribution: the mean HR values differ by ${\rm{\Delta }}\overline{\mathrm{HR}}$ = 0.031 ± 0.018, consistent with no difference at the 2σ level. We also perform a Kolmogorov–Smirnov (KS) test for the bright and faint half HR distributions, and conclude that the two distributions are statistically consistent with a KS p-value of 0.07. However, if future studies with larger data sets find ${\rm{\Delta }}\overline{\mathrm{HR}}\sim 0.03$ with high significance, this difference would be a leading systematic uncertainty in measurements of the dark energy equation of state, w.

79 ASTRONOMY AND ASTROPHYSICS↗

Collaborative Research: Improved Efficiency and Coupling of the Radiation Code in the ACME Earth System Model (Final Report)

The complexity of radiative transfer, its importance to the exchange of energy in the climate system, and its high computational cost establishes importance of an accurate and efficient radiative transfer parameterization for climate simulation. Previous work by the proposing team at AER led to the development of the radiation code, RRTMG, which has been widely accepted by the global modeling community as a fast and accurate advancement over the previous generation of radiation codes. It has been in use in the NCAR CESM for many years, and it has been implemented in the initial version the DOE E3SM model. However, its computational cost remains high relative to other components in part due to its complexity and to its inefficient use of modern optimization strategies, and this project helped address this limitation for the code’s application in E3SM. Under other funding, the Investigators of this project led an effort to develop a high-performance broadband radiation code, called RTE+RRTMGP, which is a completely restructured code that will take advantage of modern computational capabilities to enhance its performance while retaining the strengths and accuracy of the original code. Designed to perform over a range of computer architectures, RTE+RRTMGP makes extensive use of Fortran 2003 features to improve both its efficiency and its use of memory. RTE+RRTMGP is expected to be adopted in the next generation of RTE+RRTMGP. This project allowed for advancements to the code’s computational capabilities and adding new and enhanced features. This included revising RTE+RRTMGP to run on GPU processors, analysis of and improvements to the code’s timing, modifying the gas optics in RRTMGP to increase the code’s accuracy, extensive validation of computed fluxes, heating rates and forcings, generating a cloud optical property and vertical sampling capabilities for RTE+RRTMGP, implementing a fast and accurate longwave scattering capability, and groundwork for the inclusion of a capability to specify solar variability. Many of the accomplishment in this project necessitated significant collaboration with the E3SM development team. The result of this project was optimization of a key physical component (radiative transfer calculations) of E3SM, directly supporting E3SM’s overarching global modeling objectives. More broadly, this project provided overall advancements in the use of radiative transfer calculations in atmospheric modeling and simulation, particularly for climate.

58 GEOSCIENCES↗

Supernova Cosmology with the Dark Energy Survey

This proposal requests supplemental funds to addresses our continued effort to carry out a Type Ia supernova (SN Ia) cosmology analysis with the Dark Energy Survey (DES) data. DES is well underway to discovering and identifying thousands of SN Ia out to a cosmological redshift of z =1.2 over its 5-year survey, and will obtain the best constraints on dark energy and its possible evolution with redshift. We propose to develop two key analysis algorithms and tools that are critical for this achieving the goals: 1) a final photometry pipeline that uses novel techniques to extract unbiased SN fluxes from the images and 2) a robust statistical framework for measuring cosmological parameters from SN Ia light curves with well-characterized systematic uncertainties.

79 ASTRONOMY AND ASTROPHYSICS↗

Measurement of Charged-current Muon Neutrino–argon Interactions Without Final-state Pions Using the MicroBooNE Detector

This thesis presents a new high-statistics measurement of flux-integrated single- and double-differential cross sections for charged-current muon neutrino interactions on argon nuclei without final-state pions. The analysis utilizes the full 1.3 $\times$ $10^{21}$ protons-on-target dataset collected by the MicroBooNE liquid argon time projection chamber between 2015 and 2020 at Fermilab's Booster Neutrino Beam. The results of this study are reported with respect to final-state muon kinematic variables and compared with predictions from commonly used neutrino event generators. In one-dimensional distributions, all generators perform reasonably well. However, in two dimensions, only a few demonstrate good agreement with the data. These findings provide valuable insight into characterizing neutrino-nucleon interactions. Such advancements are vital for future long-baseline neutrino experiments, which aim to accurately measure neutrino oscillation and investigate beyond-the-Standard-Model physics with high sensitivity.

Englezos, Panagiotis [Rutgers U., Piscataway (main↗