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At least 829 records · Page 46

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DOE OSTI2021

Potential Activities and Long Lifetimes of Organic Carbon-Degrading Extracellular Enzymes in Deep Subsurface Sediments of the Baltic Sea

Heterotrophic microorganisms in marine sediments produce extracellular enzymes to hydrolyze organic macromolecules, so their products can be transported inside the cell and used for energy and growth. Therefore, extracellular enzymes may mediate the fate of organic carbon in sediments. The Baltic Sea Basin is a primarily depositional environment with high potential for organic matter preservation. The potential activities of multiple organic carbon-degrading enzymes were measured in samples obtained by the International Ocean Discovery Program Expedition 347 from the Little Belt Strait, Denmark, core M0059C. Potential maximum hydrolysis rates (V max ) were measured at depths down to 77.9mbsf for the following enzymes: alkaline phosphatase, β- d -xylosidase, β- d -cellobiohydrolase, N-acetyl-β- d -glucosaminidase, β-glucosidase, α-glucosidase, leucyl aminopeptidase, arginyl aminopeptidase, prolyl aminopeptidase, gingipain, and clostripain. Extracellular peptidase activities were detectable at depths shallower than 54.95mbsf, and alkaline phosphatase activity was detectable throughout the core, albeit against a relatively high activity in autoclaved sediments. β-glucosidase activities were detected above 30mbsf; however, activities of other glycosyl hydrolases (β-xylosidase, β-cellobiohydrolase, N-acetyl-β-glucosaminidase, and α-glucosidase) were generally indistinguishable from zero at all depths. These extracellular enzymes appear to be extremely stable: Among all enzymes, a median of 51.3% of enzyme activity was retained after autoclaving for an hour. We show that enzyme turnover times scale with the inverse of community metabolic rates, such that enzyme lifetimes in subsurface sediments, in which metabolic rates are very slow, are likely to be extraordinarily long. A back-of-the-envelope calculation suggests enzyme lifetimes are, at minimum, on the order of 230days, and may be substantially longer. These results lend empirical support to the hypothesis that a population of subsurface microbes persist by using extracellular enzymes to slowly metabolize old, highly degraded organic carbon.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Neonatal Zika virus infection causes transient perineuronal net degradation

Perineuronal nets (PNNs) form a specialized extracellular matrix that predominantly surrounds parvalbumin (PV)-expressing GABAergic inhibitory interneurons and help regulate neuronal activity. Their formation early in the postnatal period is regulated by neuronal signaling and glial activation raising concerns that part of the long-term effects ascribed to perinatal viral infections could be mediated by altered PNN formation. Previously, we developed a model of neonatal Zika virus (ZIKV) infection where mice have lifelong neurological sequelae that includes motor disfunction and reduced anxiety coupled with a persistent low-grade expression in proinflammatory markers despite resolving the acute infection. Here, we demonstrate that ZIKV infection to P1 neonatal mice results in a reduction of PNN formation during the acute disease with significant reduction in Wisteria floribunda agglutinin (WFA) staining at the peak of infection [15 days post infection (dpi)] that persisted after the symptoms resolved (30 dpi). At 60 dpi, when there is residual inflammation in the CNS, the number of WFA + cells and the level of WFA staining as well as levels of aggrecan and brevican in the brains of convalescent mice were not different from those in uninfected controls, however, there was increased frequency of PNNs with an immature phenotype. Over time the impact of the perinatal infection became less evident and there were no clear differences in PNN morphology between the groups at 1 year post infection. Of note, the reduction in PNNs during acute ZIKV infection was not associated with decreased mRNA levels of aggrecan or brevican, but increased levels of degraded aggrecan and brevican indicating increased PNN degradation. These changes were associated with increased expression of matrix metalloproteinase 12 (MMP12) and MMP19, but not MMP9, a disintegrin and metalloproteinase with thrombospondin motifs 4 (ADAMTS4) or ADAMTS5. Together our findings indicate that infection at the time of PNN development interferes with PNN formation, but the nets can reform once the infection and inflammation subside.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2022

Methylphosphonate Degradation and Salt-Tolerance Genes of Two Novel Halophilic Marivita Metagenome-Assembled Genomes from Unrestored Solar Salterns

Aerobic bacteria that degrade methylphosphonates and produce methane as a byproduct have emerged as key players in marine carbon and phosphorus cycles. Here, we present two new draft genome sequences of the genus Marivita that were assembled from metagenomes from hypersaline former industrial salterns and compare them to five other Marivita reference genomes. Phylogenetic analyses suggest that both of these metagenome-assembled genomes (MAGs) represent new species in the genus. Average nucleotide identities to the closest taxon were <85%. The MAGs were assembled with SPAdes, binned with MetaBAT, and curated with scaffold extension and reassembly. Both genomes contained the phnCDEGHIJLMP suite of genes encoding the full C-P lyase pathway of methylphosphonate degradation and were significantly more abundant in two former industrial salterns than in nearby reference and restored wetlands, which have lower salinity levels and lower methane emissions than the salterns. These organisms contain a variety of compatible solute biosynthesis and transporter genes to cope with high salinity levels but harbor only slightly acidic proteomes (mean isoelectric point of 6.48).

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2025

From Pollutant Removal to Renewable Energy: MoS2-Enhanced P25-Graphene Photocatalysts for Malathion Degradation and H2 Evolution

The widespread presence of pesticides—especially malathion—in aquatic environments presents a major obstacle to conventional remediation strategies, while the ongoing global energy crisis underscores the urgency of developing renewable energy sources such as hydrogen. In this context, photocatalytic water splitting emerges as a promising approach, though its practical application remains limited by poor charge carrier dynamics and insufficient visible-light utilization. Herein, we report the design and evaluation of a series of TiO2-based ternary nanocomposites comprising commercial P25 TiO2, reduced graphene oxide (rGO), and molybdenum disulfide (MoS2), with MoS2 loadings ranging from 1% to 10% by weight. The photocatalysts were fabricated via a two-step method: hydrothermal integration of rGO into P25 followed by solution-phase self-assembly of exfoliated MoS2 nanosheets. The composites were systematically characterized using X-ray diffraction (XRD), Raman spectroscopy, transmission electron microscopy (TEM), UV-Vis diffuse reflectance spectroscopy (DRS), and photoluminescence (PL) spectroscopy. Photocatalytic activity was assessed through two key applications: the degradation of malathion (20 mg/L) under simulated solar irradiation and hydrogen evolution from water in the presence of sacrificial agents. Quantification was performed using UV-Vis spectroscopy, gas chromatography–mass spectrometry (GC-MS), and thermal conductivity detection (GC-TCD). Results showed that the integration of rGO significantly enhanced surface area and charge mobility, while MoS2 served as an effective co-catalyst, promoting interfacial charge separation and acting as an active site for hydrogen evolution. Nearly complete malathion degradation (~100%) was achieved within two hours, and hydrogen production reached up to 6000 µmol g−1 h−1 under optimal MoS2 loading. Notably, photocatalytic performance declined with higher MoS2 content due to recombination effects. Overall, this work demonstrates the synergistic enhancement provided by rGO and MoS2 in a stable P25-based system and underscores the viability of such ternary nanocomposites for addressing both environmental remediation and sustainable energy conversion challenges.

Chemistry↗

DOE OSTI2023

Functional Filaments: Creating and Degrading pH-Indicating PLA Filaments for 3D Printing

With the rapid pace of advancements in additive manufacturing and techniques such as fused filament fabrication (FFF), the feedstocks used in these techniques should advance as well. While available filaments can be used to print highly customizable parts, the creation of the end part is often the only function of a given feedstock. In this study, novel FFF filaments with inherent environmental sensing functionalities were created by melt-blending poly(lactic acid) (PLA), poly(ethylene glycol) (PEG), and pH indicator powders (bromothymol blue, phenolphthalein, and thymol blue). The new PLA-PEG-indicator filaments were universally more crystalline than the PLA-only filaments (33–41% vs. 19% crystallinity), but changes in thermal stability and mechanical characteristics depended upon the indicator used; filaments containing bromothymol blue and thymol blue were more thermally stable, had higher tensile strength, and were less ductile than PLA-only filaments, while filaments containing phenolphthalein were less thermally stable, had lower tensile strength, and were more ductile. When the indicator-filled filaments were exposed to acidic, neutral, and basic solutions, all filaments functioned as effective pH sensors, though the bromothymol blue-containing filament was only successful as a base indicator. The biodegradability of the new filaments was evaluated by characterizing filament samples after aging in soil and soil slurry mixtures; the amount of physical deterioration and changes in filament crystallinity suggested that the bromothymol blue filament degraded faster than PLA-only filaments, while the phenolphthalein and thymol blue filaments saw decreases in degradation rates.

36 MATERIALS SCIENCE↗

DOE OSTI2021

Changes in Precipitation and Air Temperature Contribute Comparably to Permafrost Degradation in a Warmer Climate: Modeling Archive

The dataset contains "ecosys" model outputs reported in Mekonnen et al. (2021) to examine the importance of heat transfer from precipitation on permafrost degradation. The study highlighted the importance of mechanistically representing this process in earth system models (ESMs) and demonstrated that precipitation is as important an environmental control on permafrost degradation as surface air temperature. Included are (1) the modeled spatially averaged annual active layer depth (ALD) and daily maximum soil temperature across the North Slope of Alaska from 1980 to 2100, and (2) 25 km resolution modeled ALD for averaged for two time intervals, 2006 - 2010 and 2096 - 2100. The results are provided for two "ecosys" simulations: S1 with precipitation heat transfer and S2 without precipitation heat transfer across the North Slope of Alaska. These data are available in a NetCDF and csv data formats. The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Light-inducible protein degradation in E. coli with the LOVdeg tag

Molecular tools for optogenetic control allow for spatial and temporal regulation of cell behavior. In particular, light-controlled protein degradation is a valuable mechanism of regulation because it can be highly modular, used in tandem with other control mechanisms, and maintain functionality throughout growth phases. Here, we engineered LOVdeg, a tag that can be appended to a protein of interest for inducible degradation in Escherichia coli using blue light. We demonstrate the modularity of LOVdeg by using it to tag a range of proteins, including the LacI repressor, CRISPRa activator, and the AcrB efflux pump. Additionally, we demonstrate the utility of pairing the LOVdeg tag with existing optogenetic tools to enhance performance by developing a combined EL222 and LOVdeg system. Finally, we use the LOVdeg tag in a metabolic engineering application to demonstrate post-translational control of metabolism. Together, our results highlight the modularity and functionality of the LOVdeg tag system and introduce a powerful new tool for bacterial optogenetics.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Light-inducible protein degradation in E. coli with the LOVdeg tag

Tague, Nathan (ORCID:0000000281146700)↗

NASA NTRS1972

The degradation of alzak by short wavelength ultraviolet radiation

The changes in reflectance of thermal aluminum coating samples exposed to different irradiating utraviolet wavelengths are discussed. It is shown that the coating is damaged faster and further by 180 to 210 in radiation than by Lyman alpha radiation. On an equivalent incident energy basis, Lyman alpha does less damage than 180 to 210 nm radiation. Above 300 nm no degradation is observed for long exposures and below 300 nm increasing degradation with decreasing wavelength is found. It is concluded that Lyman alpha radiation need not be included in laboratory testing of this thermal coating for spacecraft structures.

Donohoe, M. J.↗

NASA NTRS1972

Apollo 9 thermal-control-coating degradation

Analytical studies, ground-test data, and flight data before 1967 indicated that degradation of Apollo thermal-control coatings could be expected, possibly to an extent requiring spacecraft design changes to accomplish the worst-case lunar-landing mission. On the Apollo 9 mission, specimens of Apollo thermal-control coatings were retrieved by the astronauts during the extravehicular activity. These specimens were the first to be returned to earth from space unaffected by entry conditions. Subsequent measurements of the thermophysical properties (solar absorptance and hemispherical emittance) of the thermal-control-sample coatings revealed degradation levels well within the design capability of the Apollo spacecraft.

Smith, J. A.↗

NASA NTRS1971

Thermally restorable optical degradation effects in heat-treated Cu2S-CdS crystal heterojunctions.

We have shown that heat treatment alone does not produce appreciable degradation of the short-circuit current in Cu2S-CdS single-crystal photovoltaic heterojunctions. The degradation, which has been commonly observed, is the result of optically induced effects in the heat-treated cell, subsequent to the heat treatment. These optically induced effects can be correlated with photochemical changes induced in single crystals of CdS:Cd:Cu in which the density of Cu acceptors exceeds the density of excess-Cd donors. Major conclusions about the mechanism of the photovoltaic effect and heat-treatment processes can be drawn.

Kanev, S. K.↗

NASA NTRS1971

Formation of free radicals during mechanical degradation of elastomers.

Solithane 113 (an amorphous polyurethane elastomer) was prepared by curing equal proportions of castor oil and trifunctional isocyanate for 6 hr 45 min at 170 F. The sample material was mechanically degraded by grinding below and above its glass transition point at liquid nitrogen and room temperatures. The EPR spectra of ground samples were recorded and the number of free radicals were determined by a computer double-integration of the recorded spectra and by a comparison of the values with those of a standard material. Curves of EPR spectra suggest that different molecular mechanisms may be active in degradation of this material below and above its glass transition temperature.

Devries, K. L.↗

NASA NTRS1972

The degradation of space shuttle TPS metals in dissociated oxygen.

The interaction of space shuttle orbiter Thermal Protection System (TPS) metals with the chemical environment to which it is exposed during reentry is considered with emphasis on the effects of dissociated oxygen. Experimental results comparing the interactions of atomic (dissociated) and molecular oxygen with five candidate shuttle TPS metals, Ni-20Cr-2ThO2, Ni-20Cr-3.5Al-2ThO2, Ni-16Cr-15Fe-2Mn-.5Si-.3La-2ThO2, Haynes Alloy Number 188, and Ti-6Al-4V at their maximum planned use temperature are presented. As measured by metal recession, weight change, rate of oxide scale formation, and scale spalling, the first four metals show enhanced degradation in a dissociated oxygen environment. The enhanced degradation appears to result from differing rates of alloy constituent reactions in the two environments. The dissociated oxygen environmental tests are found to better assess the usefulness of shuttle skin materials for the planned mission than do conventional molecular (either flowing or static) oxidation experiments.-

Gilbreath, W. P.↗

NASA NTRS1972

Observations on degradation of UV systems on Nimbus spacecraft

Broad band photometer experiments in the 1200 to 3000 A have been operating on Nimbus 3 and 4 since April 1969 for the purpose of determining the nature of variations in the UV solar irradiance. An Ebert-Fastie double monochromator has been measuring the solar irradiance and earth radiance from 2500 to 3400 A for the determination of global atmospheric ozone distributions since April 1970. From prelaunch testing and an evaluation of the flight data it is concluded that the principal source of degradation is probably the spacecraft. The degradation produces a characteristic signal loss and change in angular response of the system which might be explained by micron sized droplets becoming a permanent residue under the influence of solar UV radiation.

Heath, D. F.↗

NASA NTRS1973

Water and processes of degradation in the Martian landscape

It is shown that erosion has been active on Mars so that many of the surface landforms are products of degradation. Unlike earth, erosion has not been a universal process, but one areally restricted and intermittently active so that a landscape is the product of one or two cycles of erosion and large areas of essentially undisturbed primitive terrain; running water has been the principal agent of degradation. Many features on Mars are most easily explained by assuming running surface water at some time in the past; for a few features, running water is the only possible explanation.

Milton, D. J.↗

NASA NTRS1972

A model to predict the degradation of a SiGe thermopile.

Discussion of the various phenomena which affect the available output power of a typical radioisotope thermoelectric generator (RTG), including estimates of the magnitude of these effects. Power degradation, as well as the corresponding changes in operating temperature, are calculated by means of a computer code which systematically accounts for the time- and temperature-dependent variables. A model for predicting available output power of an RTG is developed which includes changes in performance due to fuel decay, alteration of bulk thermoelectric properties, changes in electrode contacts, geometry changes due to material sublimation, and degradation of the thermal insulation.

Stapfer, G.↗

NASA NTRS1973

Diffusional creep and creep-degradation in dispersion-strengthened Ni-Cr base alloys.

Dispersoid-free regions were observed in the dispersion-strengthened alloy TD-NiCr (Ni-20 Cr-2 ThO2) after slow strain rate testing (stress rupture, creep, and fatigue) in air from 1145 to 1590 K. Formation of the dispersoid-free regions appears to be the result of diffusional creep. The net effect of creep in TD-NiCr is the degradation of the alloy to a duplex microstructure. Creep degradation of TD-NiCr is further enhanced by the formation of voids and intergranular oxidation in the dispersoid-free bands. Void formation was observed after as little as 0.13% creep deformation at 1255 K. The dispersoid-free regions apparently provide sites for void formation and oxide growth since the strength and oxidation resistance of Ni-20 Cr-2 ThO2.

Whittenberger, J. D.↗

NASA NTRS1973

Restoration of degraded images by composite gratings in a coherent optical processor.

A study has been made on restoration of degraded images utilizing spatial filtering techniques in a coherent optical processor. This study differs from other coherent approaches in that the spatial filters employed contain only composite gratings that are quite simple to produce. A general method of synthesizing the appropriate composite gratings for linearly smeared as well as multiply exposed and out-of-focus images will be presented in some detail with experimental results. The extension of the method of synthesis to other types of degradation is briefly discussed.

Jablonowski, D. P.↗