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At least 829 records · Page 46

NESM TAG Meeting Notes

March 2015 NESM TAG Notes related to 1) Structure surface representation, 2) Structure-fluid coupling algorithm, 3) Coupled time integration scheme, 4) Coupling data exchange API, 5) Portability across platforms and builds, and 6) Testing and verification.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Admiralty Inlet Pilot Tidal Project Final Technical Report

This document represents the final report for the Admiralty Inlet Pilot Tidal Project, located in Puget Sound, Washington, United States. The Project purpose was to license, permit, and install a grid-connected deep-water tidal turbine array (two turbines) to be used as a platform to gather operational and environmental data on tidal energy generation. The data could then be used to better inform the viability of commercial tidal energy generation from technical, economic, social, and environmental standpoints. This data would serve as a critical step towards the responsible advancement of commercial scale tidal energy in the United States and around the world. In late 2014, Project activities were discontinued due to escalating costs, and the DOE award was terminated in early 2015. Permitting, licensing, and engineering design activities were completed under this award. Final design, deployment, operation, and monitoring were not completed. This report discusses the results and accomplishments achieved under the subject award.

16 TIDAL AND WAVE POWER↗

A Novel use of Direct Simulation Monte-Carlo to Model Dynamics of COVID-19 Pandemic Spread

In this report, we evaluate a novel method for modeling the spread of COVID-19 pandemic. In this new approach we leverage methods and algorithms developed for fully-kinetic plasma physics simulations using Particle-In-Cell (PIC) Direct Simulation Monte-Carlo (DSMC) models. This approach then leverages Sandia-unique simulation capabilities, and High-Performance Computer (HPC) resources and expertise in particle-particle interactions using stochastic processes. Our hypothesis is that this approach would provide a more efficient platform with assumptions based on physical data that would then enable the user to assess the impact of mitigation strategies and forecast different phases of infection. This work addresses key scientific questions related to the assumptions this new approach must make to model the interactions of people using algorithms typically used for modeling particle interactions in physics codes (kinetic plasma, gas dynamics). The model developed uses rational/physical inputs while also providing critical insight; the results could serve as inputs to, or alternatives for, existing models. The model work presented was developed over a four-week time frame, thus far showing promising results and many ways in which this model/approach could be improved. This work is aimed at providing a proof-of-concept for this new pandemic modeling approach, which could have an immediate impact on the COVID-19 pandemic modeling, while laying a basis to model future pandemic scenarios in a manner that is timely and efficient. Additionally, this new approach provides new visualization tools to help epidemiologists comprehend and articulate the spread of this and other pandemics as well as a more general tool to determine key parameters needed in order to better predict pandemic modeling in the future. In the report we describe our model for pandemic modeling, apply this model to COVID-19 data for New York City (NYC), assess model sensitivities to different inputs and parameters and , finally, propagate the model forward under different conditions to assess the effects of mitigation and associated timing. Finally, our approach will help understand the role of asymptomatic cases, and could be extended to elucidate the role of recovered individuals in the second round of the infection, which is currently being ignored.

59 BASIC BIOLOGICAL SCIENCES↗

NREL’s Cyber-Energy Emulation Platform for Research and System Visualization

This paper presents NREL’s Cyber Energy Emulation (CEE) Platform. This is a novel emulation platform for achieving real-time visualization of large-scale environments involving cyber-physical devices. It allows for the environment to include real, physical hardware, along with emulated devices communicating with each other as part of the same system. The CEE Platform is also capable of streaming, collecting, storing, transporting, and visualizing all data within the emulated environment. By providing this capability, it enables high-fidelity visual analysis of events to be performed in real time as well as the use of historical data for forensic analysis. This paper presents the design of the CEE Platform as well as several potential use cases and applications. It also aims to highlight why this type of visualization tool has potential for research and education about cyber-physical systems.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Peregrine Software Development: Report on the Code Conversion From Python to C++

This work package seeks to convert the Peregrine software tool from its original Python implementation to a production version based on the C++ language. Peregrine is a powerful research platform with a multitude of advanced data analytics and data visualization functionalities. Developed by scientists to explore multimodal and multidimensional data related to the production of components using powder bed additive manufacturing processes, the tool implements state-of-the-art algorithms to assist machine users in making build or part quality determinations. Given that Peregrine is data-intensive, the goal of this conversion is to enhance the tool’s flexibility and interactivity and reduce the number of code dependencies to facilitate its deployment as part of the ongoing technology transfer campaign. This brief document provides an overview of Peregrine’s functionalities and capabilities, along with a detailed description of the core functionalities that have been implemented to date in the new C++ version. This document serves as a development update at the end of the first year of the ongoing conversion and will be regularly updated as progress continues.

97 MATHEMATICS AND COMPUTING↗

Control-Agnostic Beam Instrumentation with Redis at the Core

Redis isn’t a database — it’s our protocol. Fermilab’s RedisAdapter provides a high-performance, control-system-agnostic bridge between digitized beam data and downstream consumers such as ACNET and EPICS. It forms the foundation of three new software components deployed across MicroTCA-based digitizers: GMMDM, a runtime for memory-mapped data movement from Zynq-based platforms; GRAFE, a front end for Redis-to-ACNET presentation; and GREFE, an EPICS IOC front end. Together, these tools enable modular, standardized instrumentation pipelines. Precision timing is handled via White Rabbit PPS distribution, allowing nanosecond-scale synchronization across crates. This architecture, originally prototyped in Booster BPM systems, is now deployed on modern hardware and designed to meet the performance, modularity, and scalability requirements of the PIP-II era.

Steinkamp, Derek [Fermilab] (ORCID:000900027228626↗

Global Carbon Project: the 2013 global carbon budget (includes V.1.1, Nov2013, V.1.3, Dec2013, V.2.3, June2014, and V.2.4, July2014)

Global emissions of carbon dioxide from the combustion of fossil fuels will reach 36 billion tonnes for the year 2013. "This is a level unprecedented in human history," says CSIRO's Dr Pep Canadell, Executive-Director of the Global Carbon Project (GCP) and co-author of a new report. The GCP provides an annual report of carbon dioxide emissions, land and ocean sinks and accumulation in the atmosphere, incorporating data from multiple research institutes from around the world. The 2013 figures coincide with the global launch of the Global Carbon Atlas, an online platform to explore, visualise and interpret the emissions data at the global, regional and national scales (www.globalcarbonatlas.org). The full data and methods are published today in the journal Earth System Science Data Discussions, and data and other graphic materials can be found at: www.globalcarbonproject.org/carbonbudget. The Global Carbon Budget 2013 is a collaborative effort of the global carbon cycle science community coordinated by the Global Carbon Project.

54 ENVIRONMENTAL SCIENCES↗

Global Carbon Project: the 2013 Global Carbon Budget (Version 2.3, issued June 2014)

Global emissions of carbon dioxide from the combustion of fossil fuels will reach 36 billion tonnes for the year 2013. "This is a level unprecedented in human history," says CSIRO's Dr Pep Canadell, Executive-Director of the Global Carbon Project (GCP) and co-author of a new report. The GCP provides an annual report of carbon dioxide emissions, land and ocean sinks and accumulation in the atmosphere, incorporating data from multiple research institutes from around the world. The 2013 figures coincide with the global launch of the Global Carbon Atlas, an online platform to explore, visualise and interpret the emissions data at the global, regional and national scales (www.globalcarbonatlas.org). The full data and methods are published today in the journal Earth System Science Data Discussions, and data and other graphic materials can be found at: www.globalcarbonproject.org/carbonbudget. The Global Carbon Budget 2013 is a collaborative effort of the global carbon cycle science community coordinated by the Global Carbon Project. The landing page for this dataset includes links to V. 1.1, issued Nov2013, V.1.3, issued Dec2013, and the June 2014 issue of V.2.3 of the 2013 Global Carbon Budget.

54 ENVIRONMENTAL SCIENCES↗

Vind: A Blockchain-Enabled Supply Chain Provenance Framework for Energy Delivery Systems

Enterprise-level energy delivery systems (EDSs) depend on different software or hardware vendors to achieve operational efficiency. Critical components of these systems are typically manufactured and integrated by overseas suppliers, which expands the attack surface to adversaries with additional opportunities to infiltrate into EDSs. Due to this reason, the risk management of the EDS supply chain is crucial to ensure that we are knowledgeable about the vulnerabilities in software and hardware components that comprise any critical part, quantifiable risk metrics to assess the severity and exploitability of the attack, and provide remediation solutions that can influence a prioritized mitigation plan. There is a need to realize cyber supply chain risk management for industrial control systems’ hardware, software, and computing and networking services associated with bulk electric system (BES) operations. This article proposes a blockchain-based cyber supply chain provenance platform (“Vind”) for EDSs to realize data provenance in a cyber supply chain ecosystem.

Bandara, Eranga↗

Heavy Duty Natural Gas Single Cylinder Research Engine Installation, Commissioning, and Baseline Testing

Natural Gas (NG) Internal Combustion Engines (ICE) are a promising alternative to diesel engines for on-road heavy-duty applications to reduce greenhouse gas and harmful pollutant emissions. NG engines have not been widely adopted due to the lower thermal efficiency compared with diesel engine counterparts. To develop the base knowledge required to reach the desired efficiency, a Single Cylinder Engine (SCE) is the most effective platform to acquire reliable and repeatable data. A SCE test cell was developed using a Cummins 15-liter six-cylinder heavy-duty engine block modified to fire one cylinder (2.5-liter displacement). A Woodward Large Engine Control Module (LECM) is integrated to permit implementation of real-time advanced combustion control. Intake and exhaust characteristics, fuel composition, and exhaust gas recirculated substitution rate (EGR) are fully adjustable. A high-speed data acquisition system acquires in-cylinder, intake, and exhaust pressure for combustion analysis. The baseline testing shows reliable and consistent results for engine thermal efficiency, indicated mean effective pressure (IMEP), and coefficient of variance of the IMEP over a wide range of operating conditions while achieving effective control of all engine control and operation variables. This test cell will be used to conduct a research program to develop new and innovative control algorithms and CFD optimized combustion chamber designs, allowing ultra-high efficiency and low emissions for NG ICE heavy-duty on-road applications.

03 NATURAL GAS↗

Categorization of Computing Education Resources into the ACM Computing Classification System

The Ensemble Portal harvests resources from multiple heterogonous federated collections. Managing these dynamically increasing collections requires an automatic mechanism to categorize records in to corresponding topics. We propose an approach to use existing ACM DL metadata to build classifiers for harvested resources in the Ensemble project. We also present our experience on utilizing the Amazon Mechanical Turk platform to build ground truth training data sets from Ensemble collections.

99 GENERAL AND MISCELLANEOUS↗

Synthetic Proxy Infrastructure for Task Evaluation

The Synthetic Proxy Infrastructure for Task Evaluation is a proxy application designed to support application developers in gauging the performance of various task granularities when determining how best to utilize task based programming models.The infrastructure is designed to provide examples of common communication patterns with a synthetic workload intended to provide performance data to evaluate programming model and platform overheads for the purpose of determining task granularity for task decomposition purposes. This is presented as a reference implementation of a proxy application with run-time configurable input and output task dependencies ranging from an embarrassingly parallel scenario to patterns with stencil-like dependencies upon their nearest neighbors. Once all, if any, inputs are satisfied each task will execute a synthetic workload (a simple DGEMM of in this case) of varying size and output all, if any, outputs to the next tasks.The intent is for this reference implementation to be implemented as a proxy app in different programming models so as to provide the same infrastructure and to allow for application developers to simulate their own communication needs to assist in task decomposition under various models on a given platform.

Junghans, Christoph↗

Dynamically-Spaced Geo-Grid Segmentation for Weighted Point Sampling on a Polygon Map Layer

Geo-grid algorithms divide a large polygon area into several smaller polygons, which are important for studying or executing a set of operations on underlying topological features of a map. The current geo-grid algorithms divide a large polygon in to a set of smaller but equal size polygons only (e.g. is ArcMaps Fishnet). The time to create a geo-grid is typically proportional to number of smaller polygons created. This raises two problems - (i) They cannot skip unwanted areas (such as water bodies, given about 71% percent of the Earth's surface is water-covered); (ii) They are incognizant to any underlying feature set that requires more deliberation. In this work, we propose a novel dynamically spaced geo-grid segmentation algorithm that overcomes these challenges and provides a computationally optimal output for borderline cases of an uneven polygon. Our method uses an underlying topological feature of population distributions, from the LandScan Global 2016 dataset, for creating grids as a function of these weighted features. We benchmark our results against available algorithms and found our approach improves geo-grid creation. Later on, we demonstrate the proposed approach is more effective in harvesting Points of Interest data from a crowd-sourced platform.

Sims, Kelly↗

Evaluating the ProtoDUNE-SP Detector Performance to Measure a 6 GeV/c Positive Kaon Inelastic Cross Section on Argon

The ProtoDUNE Single-Phase Liquid Argon Time Projection Chamber \\ (ProtoDUNE-SP LArTPC) is a prototype for the Deep Underground Neutrino Experiment (DUNE), a future long-baseline neutrino oscillation experiment. Based at the CERN Neutrino Platform, ProtoDUNE-SP LArTPC collected data from a charged test beam in the fall of 2018. It then took data of cosmic-ray muons from November 2018 to the summer of 2020. The main goals of the prototype were to measure parameters related to charged particle passage in argon and evaluate the performance of the detector to inform future DUNE Far Detector development. The test beam provided kaons, pions, muons, protons, and electrons to the detector. These particles represent common final state particles in neutrino interactions, therefore providing information to DUNE on modeling charged particles in argon for its neutrino physics program. In addition to neutrino physics, DUNE has proposed an analysis using the DUNE Far Detector module to set limits for proton decay through the decay channel $p\rightarrow K^++\bar{\nu}$. This measurement would require information on kaons in argon, providing ProtoDUNE-SP LArTPC another opportunity to aid DUNE. This thesis describes the calibration of ProtoDUNE-SP and its detector performance, which serves as a benchmark for the performance of the DUNE Far Detector modules. A specific calibration highlighted is the evaluation of the liquid argon purity in the detector. These measurements use cosmic-ray muons reconstructed in the detector that are calibrated and matched to data from scintillator strips external to the TPC, known as the Cosmic Ray Tagger (CRT). The thesis will discuss the algorithms to match the data between the ProtoDUNE-SP LArTPC and the CRT and discuss the liquid argon purity measurements using one of the algorithms. Data sets of calibrated tracks measured the liquid argon contamination as consistently below 100 ppt oxygen equivalent. After these discussions on the ProtoDUNE-SP LArTPC detector, the thesis will present an evaluation of the inclusive inelastic, sometimes referred to as a reactive, cross section on argon of kaons from the ProtoDUNE-SP test beam with an average momentum of 6 GeV/c.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Real-time Anomaly Detection at the L1 Trigger of CMS Experiment

We present the preparation, deployment, and testing of an autoencoder trained for unbiased detection of new physics signatures in the CMS experiment Global Trigger (GT) test crate FPGAs during LHC Run 3. The GT makes the final decision whether to readout or discard the data from each LHC collision, which occur at a rate of 40 MHz, within a 50 ns latency. The Neural Network makes a prediction for each event within these constraints, which can be used to select anomalous events for further analysis. The GT test crate is a copy of the main GT system, receiving the same input data, but whose output is not used to trigger the readout of CMS, providing a platform for thorough testing of new trigger algorithms on live data, but without interrupting data taking. We describe the methodology to achieve ultra low latency anomaly detection, and present the integration of the DNN into the GT test crate, as well as the monitoring, testing, and validation of the algorithm during proton collisions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Capture and X-ray diffraction studies of protein microcrystals in a microfluidic trap array

A microfluidic platform has been developed for the capture and X-ray analysis of protein microcrystals, affording a means to improve the efficiency of XFEL and synchrotron experiments. X-ray free-electron lasers (XFELs) promise to enable the collection of interpretable diffraction data from samples that are refractory to data collection at synchrotron sources. At present, however, more efficient sample-delivery methods that minimize the consumption of microcrystalline material are needed to allow the application of XFEL sources to a wide range of challenging structural targets of biological importance. Here, a microfluidic chip is presented in which microcrystals can be captured at fixed, addressable points in a trap array from a small volume (<10 µl) of a pre-existing slurry grown off-chip. The device can be mounted on a standard goniostat for conducting diffraction experiments at room temperature without the need for flash-cooling. Proof-of-principle tests with a model system (hen egg-white lysozyme) demonstrated the high efficiency of the microfluidic approach for crystal harvesting, permitting the collection of sufficient data from only 265 single-crystal still images to permit determination and refinement of the structure of the protein. This work shows that microfluidic capture devices can be readily used to facilitate data collection from protein microcrystals grown in traditional laboratory formats, enabling analysis when cryopreservation is problematic or when only small numbers of crystals are available. Such microfluidic capture devices may also be useful for data collection at synchrotron sources.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

ATDM Data Management FY2015: Data Warehouse Progress Report

The Advanced Technology Development and Mitigation (ATDM) program at Sandia National Laboratories is a new effort to build next-generation simulation codes that will map well to upcoming exascale computing platforms. Rather than follow traditional single- program, multiple data (SPMD) programming techniques, ATDM is developing applications in an asynchronous many task (AMT) form that describes work as a graph of tasks that have data dependencies. The data management team is focused on developing a data warehouse for ATDM that will enable tasks to store and exchange data objects efficiently. This report summarizes the data management teams efforts during FY15, and documents: (1) an initial API and implementation for the data warehouses key/value store, (2) API requirements for use with ATDMs runtime, (3) initial requirements for storing ATDM-specific data, and (4) the current organization of software components that will be used by the data warehouse.

97 MATHEMATICS AND COMPUTING↗

Graph Neural Networks for Surrogate Modeling of Offshore Floating Platforms

Floating offshore wind turbines (FOWTs) present an significant opportunity to increase renewable energy generation. However, significant challenges remain before FOWTs can be widely commercialized and deployed. In particular, hydrodynamic loading on the platforms can stress the overall structure, damage the mooring systems, and impact power generation. Studying these loads is difficult and often relies on computationally expensive models or experiments. In this work, we explore the use of graph neural networks (GNNs) to construct flexible, data-driven surrogates for hydrodynamic loads on platforms. We leverage the natural graph-like structure of offshore wind platform designs to enable the GNN model to learn to approximate the loads for different wave conditions and structural designs. We demonstrate potential uses for the surrogate by performing parameter sweeps and ridge analysis on the trained model to identify the impacts of different wave and structural features on the loads.

floating offshore wind turbines↗