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At least 829 records · Page 46

Editorial: Selective Controls on Microbial Energy Metabolisms: From the Microscale to the Macroscale

A mechanistic and predictive understanding of the genotypic and phenotypic controls on microbial element cycling remains a grand challenge in microbiology. While the composition and concentration of carbon sources, electron donors, and electron acceptors are known to influence microbial community structure by selecting for microbial sub-populations with distinct catabolic and respiratory pathways, selective inhibitors and trace nutrient availability modulate the activity of metabolic enzymes. This in turn influences the distribution of microbial sub-populations with distinct metabolic and respiratory traits, which are then structured by complex multi-dimensional environmental gradients that influence the composition, gene content and element cycling activity of microbiomes. While some parameters are known to select for different respiratory activities (e.g., lanthanides as essential nutrients for methanotrophs, molybdate as a specific inhibitor of sulfate reduction, carbon:nitrogen ratio and concentration as a control on the end-products of nitrate respiration), there are others to discover, and demonstrating how selective parameters operate and mediate element cycling across scales requires multi-disciplinary research in both the lab and field.

59 BASIC BIOLOGICAL SCIENCES↗

An Empirical Quantile Estimation Approach for Chance-Constrained Nonlinear Optimization Problems

We investigate an empirical quantile estimation approach to solve chance-constrained nonlinear optimization problems. Our approach is based on the reformulation of the chance constraint as an equivalent quantile constraint to provide stronger signals on the gradient. In this approach, the value of the quantile function is estimated empirically from samples drawn from the random parameters, and the gradient of the quantile function is estimated via a finite-difference approximation on top of the quantile-function-value estimation. We establish a convergence theory of this approach within the framework of an augmented Lagrangian method for solving general nonlinear constrained optimization problems. The foundation of the convergence analysis is a concentration property of the empirical quantile process, and the analysis is divided based on whether or not the quantile function is differentiable. In contrast to the sampling-and-smoothing approach used in the literature, the method developed in this paper does not involve any smoothing function and hence the quantile-function gradient approximation is easier to implement and there are less accuracy-control parameters to tune. Furthermore, we demonstrate the effectiveness of this approach and compare it with a smoothing method for the quantile-gradient estimation. Numerical investigation shows that the two approaches are competitive for certain problem instances.

Applied Probability↗

Changes in cytosolic pH within Arabidopsis root columella cells play a key role in the early signaling pathway for root gravitropism

Ratiometric wide-field fluorescence microscopy with 1',7'- bis-(2-carboxyethyl)-5-(and-6)-carboxyfluorescein (BCECF)-dextran demonstrated that gravistimulation leads to rapid changes in cytoplasmic pH (pHc) in columella cells of Arabidopsis roots. The pHc of unstimulated columella cells in tiers 2 and 3, known sites of graviperception (E.B. Blancaflor, J.B. Fasano, S. Gilroy [1998] Plant Physiol 116: 213-222), was 7.22 +/- 0.02 pH units. Following gravistimulation, the magnitude and direction of pHc changes in these cells depended on their location in the columella. Cells in the lower side of tier 2 became more alkaline by 0.4 unit within 55 s of gravistimulation, whereas alkalinization of the cells on the upper side was slower (100 s). In contrast, all cells in tier 3 acidified by 0.4 pH unit within 480 s after gravistimulation. Disrupting these pHc changes in the columella cells using pHc modifiers at concentrations that do not affect root growth altered the gravitropic response. Acidifying agents, including bafilomycin A1, enhanced curvature, whereas alkalinizing agents disrupted gravitropic bending. These results imply that pHc changes in the gravisensing cells and the resultant pH gradients across the root cap are important at an early stage in the signal cascade leading to the gravitropic response.

NASA Discipline Plant Biology↗

Discrete stochastic model of point defect-dislocation interaction for simulating dislocation climb

Dislocation climb is an important high temperature process in metals plasticity, responsible for the phenomena such as creep, swelling, or hardening. Climb is defined by the ability of dislocations to leave their original glide plane by interacting with point defects. As such, dislocation climb is controlled by point defect diffusion/absorption/emission, all of which involve thermal activation. The existing thermodynamically consistent models for climb are generally formulated in a continuum framework, through the definition of effective defect fluxes and climb propensities in response to thermodynamic driving forces. However, the point-wise discrete nature of vacancies (and/or self-interstitials) confers a highly discrete nature to the climb dynamics, which is also strongly affected by elastic forces. The combination of discreteness, thermal activation, and elasticity makes this process too challenging for direct atomistic methods such as molecular dynamics. Here we develop a kinetic Monte Carlo model that captures vacancy generation and transport kinetics acting in conjuction with the evolving elastic fields provided by discrete dislocation dynamics simulations. The two models are coupled via the applied stresses and stress gradients generated by dislocation structures at vacancy locations. Our simulations reveal two surprising results. First that climb is dominated by vacancy emission even when the background vacancy concentration is much higher than the equilibrium one. And, second, that climb velocities might be much faster than otherwise believed when one uses the classical theories of climb. These effects are due to the locality of vacancy-dislocation processes, which are not captured in classical treatments that assume smooth vacancy fluxes and homogeneous concentrations. We apply the method to study elementary climb processes in body-centered cubic iron and furnish climb mobility functions to be used in parametric dislocation dynamics and/or crystal plasticity simulations. Here, we apply the technique to study non-conservative plastic bypass of spherical precipitates by edge dislocations and point out the differences between our discrete approach and existing continuum formulations.

36 MATERIALS SCIENCE↗

Coarse-Grained Simulations of Polyrotaxane Hydrogels under Quiescent and Shear Conditions

Cyclodextrin-based polyrotaxanes (PR) form hydrogels in water through cyclodextrin (CD) aggregation and crystallization. These networks can break under shear flows, making them versatile platforms for extrusion-based 3D printing. To optimize the material properties of 3D-printed PR gels, a microscopic understanding of the structural evolution during 3D printing is necessary. Here, we employ coarse-grained (CG) simulations to reveal the PR assembly process at the molecular level. Our simulations reproduce the experimental crystal morphologies of PR at varying concentrations and chain lengths under quiescent conditions. Using nonequilibrium simulations, we show shear flow ruptures crystalline domain connectivity in PR gels and stacks the lamellae in the gradient direction, allowing the materials to flow during 3D printing. After the cessation of flow, the anisotropic crystal alignment and absence of available dangling PR diminish the intercrystal connectivity. The printed materials are therefore mechanically weaker than the pristine hydrogels, in agreement with experimental results. Nonetheless, by relating the microscopic structural evolution with viscoelastic properties of PR gels and solutions, we elucidate how flow conditions and sample composition affect the 3D printing performance of PR hydrogels.

Smith, Cameron D. [Dartmouth College, Hanover, NH ↗

Analysis of the depletion of a stored aerosol in low gravity

The depletion of an aerosol stored in a container has been studied in l-g and in low gravity. Models were developed for sedimentation, coagulation and diffusional losses to the walls. The overall depletion caused by these three mechanisms is predicted to be of order 5 to 8 percent per hour in terrestrial conditions, which agrees with laboratory experience. Applying the models to a low gravity situation indicates that there only coagulation will be significant. (Gravity influences diffusional losses because of convection currents caused by random temperature gradients). For the types of aerosol studied, the rate of depletion of particles should be somewhat less than 0.001 N percent per hour, where N is the concentration per cu cm.

Squires, P.↗

Biaxial and uniaxial data for statistical comparisons of a ceramic's strength

The uniaxial and equibiaxial tensile strengths of a brittle material were measured in bending. Equibiaxial tension was attained by concentric ring loading of disks and uniaxial tension by four-point line loading of plates. The two specimen designs give equal volumes, surface areas, and stress gradients. Ground surfaces and lapped surfaces were tested. The equibiaxial tensile strength of a dense alumina was lower than the uniaxial tensile strengths for both ground and lapped surfaces, 8.5 and 8.1%, respectively. The Batdorf theory of flaw statistics, in which biaxial tensile strengths can be predicted from the statistical distribution of uniaxial tensile strength measurements, agreed with the data.

Giovan, M. N.↗

Microbial communities and microprofiles of sulfide and oxygen of alum rock sulfur springs

The microbial community of Alum Rock sulfur spring Site 3 was studied along one branch of the main stream and between the two branches, 150 cm distant from the source. The community at the source was dominated by green sulfur photosynthetic bacteria of the genus Chlorobium. At 15 cm to 35 cm from the source dominance in the community shifted to the genus Flexibacter at the surface of the mat and purple bacteria of the genus Chromatium underneath. At 50 cm to 80 cm colorless sulfur oxidizing bacteria of the genus Thiothrix began to appear. At 100 cm to 150 cm, the surface of the mat was still dominated by Flexibacter, but underneath dominance shifted to purple sulfur bacteria as above, as well as cyanobacteria of the genus Oscillatoria and Pseudonabaena. The measurements of temperature along the stream showed no significant gradient. Community variations appear to be controlled more by sulfide than temperature. Ten ml of the overlying water were taken and fixed immediately to determine the sulfide concentration by the methylene blue method. A sulfide concentration of 106 micro-m was calculated for the overlying water.

Fischer, U.↗

Lightning location relative to storm structure in a supercell storm and a multicell storm

Relationships between lightning location and storm structure are examined for one radar volume scan in each of two mature, severe storms. One of these storms had characteristics of a supercell storm, and the other was a multicell storm. Data were analyzed from dual-Doppler radar and dual-VHF lightning-mapping systems. The distributions of VHF impulse sources were compared with radar reflectivity, vertical air velocity, and their respective gradients. In the supercell storm, lightning tended to occur along streamlines above and down-shear of the updraft and reflectivity cores; VHF impulse sources were most concentrated in reflectivities between 30 and 40 dBZ and were distributed uniformly with respect to updraft speed. In the multicell storm, on the other hand, lightning tended to coincide with the vertical reflectivity and updraft core and with the diverging streamlines near the top of the storm. The results suggest that the location of lightning in these severe storms were most directly associated with the wind field structure relative to updraft and reflectivity cores. Since the magnitude and vertical shear of the environmental wind are fundamental in determining the reflectivity and wind field structure of a storm, it is suggested that these environmental parameters are also fundamental in determining lightning location.

Ray, Peter S.↗

Thermal Control in Hypersonic Leading Edges Using Liquid Metal High Temperature Oscillating Heat Pipes

The desire to increase the range and speed of hypersonic vehicles requires sharp, shape-stable Wing Leading Edges (WLE) with performance capabilities well beyond the current state of the art. The concentrated heat flux on sharp leading edges can lead to runaway thermal and mechanical failures. Heat pipes provide a passive solution to minimize the peak temperature, thermal gradients, and resulting thermal stresses near the WLE. Conventional heat pipes have been shown to address these issues at conditions as high as Mach 8. Oscillating heat pipes (OHPs) could be used to extend this benefit to missions with higher Mach numbers since their heat transport capacity typically exceeds that of conventional heat pipes. In the current investigation, several identical liquid metal high-temperature oscillating heat pipes (LMHOHPs) were constructed and tested to demonstrate the concept. The LMHOHPs had six turns, internal diameters of 2 mm, and total lengths of 100 mm. They were additively manufactured from C103 niobium alloy and charged with lithium to reach a fill ratio of approximately 50%. The boundary conditions of the experiment were designed to resemble those of various hypersonic flight profiles. Testing was performed with a system consisting of flow-controlled acetylene torch heating and radiation dominated heat rejection. The LMHOHP’s performance was measured using temperature data from an infrared camera and pyrometer. The experimental results were used to evaluate the capability of C103/lithium LMHOHPs under various flight regimes. A heat transfer model of the LMHOHP was proposed and validated against test data. Insights from the model were then extrapolated to evaluate a Tungsten-RHC/Gallium LMHOHP with anticipated capabilities beyond that of the C103/lithium system.

Max Pawlick↗

An extrapolation method to remove spurious stress concentration in micromechanical analyses of composites using pixel-based meshes

It is easier to generate a finite element mesh of complicated geometries with voxel-based meshes compared to conformal meshes. However, the local stresses in voxel-based meshes are higher owing to artificial stress concentration caused due to jagged lines that approximate a curve. Here, we propose a method that accounts for this anomaly which would lead to accurate prediction of maximum von Mises stress in voxel-based meshes. The method is based on the variation of reciprocal of stresses and associated numerical gradient. The prediction of the proposed method is compared against the results of a conformal mesh by considering four two-dimensional example problems. The accuracy of the proposed method is verified using different mesh densities, material properties, and integration schemes. The proposed method was also implemented on a conformal mesh to verify that it filters out just the spurious stress concentration and not the realistic stress concentration.

36 MATERIALS SCIENCE↗

Deep reinforcement learning control of hydraulic fracturing

Hydraulic fracturing is a technique to extract oil and gas from shale formations, and obtaining a uniform proppant concentration along the fracture is key to its productivity. Recently, various model predictive control schemes have been proposed to achieve this objective. But such controllers require an accurate and computationally efficient model which is difficult to obtain given the complexity of the process and uncertainties in the rock formation properties. In this article, we design a model-free data-based reinforcement learning controller which learns an optimal control policy through interactions with the process. Deep reinforcement learning (DRL) controller is based on the Deep Deterministic Policy Gradient algorithm that combines Deep-Q-network with actor-critic framework. In addition, we utilize dimensionality reduction and transfer learning to quicken the learning process. We show that the controller learns an optimal policy to obtain uniform proppant concentration despite the complex nature of the process while satisfying various input constraints.

42 ENGINEERING↗

Sharp decline of dust events induces regional wetting over arid and semi-arid Northwest China in the NCAR Community atmosphere model

Abstract Multiple lines of observational evidence have indicated a significant wetting over the arid and semi-arid Northwest China (NWC) during recent decades, coinciding with a simultaneous sharp decline of dust events. Although recent studies have attributed NWC wetting to different anthropogenic and natural forcings, the mechanisms are not definitive and the regional wetting has been greatly underestimated in the Coupled Model Intercomparison Project historical simulations. Based on sensitivity experiments with different dust emission amounts using the NCAR Community Atmospheric Model version 5 (CAM5), here we find that decreasing dusts exert significant impacts on mixed-phase clouds through reducing the concentration of ice nucleating particles, increase the NWC precipitation and thus induce regional wetting through enhancing convection precipitation. A possible convection invigoration mechanism whereby the atmospheric vertical temperature gradient and convective instability are strengthened by reduced dusts, leading to convection invigoration and increased precipitation. These results are reinforced by simulations over the dust region in North Africa where mixed-phase and ice clouds are rare and reduced dusts do not increase precipitation. This study highlights the possible mechanism of dust-ice cloud interactions in recent NWC wetting and future regional climate change.

54 ENVIRONMENTAL SCIENCES↗

Impact of Technology Improvements on the Cost of Hydrogen Produced using SOEC Technology at Large Scale

National Energy Technology Laboratory (NETL) provides system-level process, cost, and market analyses on solid oxide cell (SOC) based technologies. Specifically, techno-economic analyses (TEA), market assessments, and other technology evaluations serve to guide the U.S. Department of Energy (DOE) Office of Fossil Energy and Carbon Management (FECM) Reversible Solid Oxide Fuel Cell (R-SOFC) Program technology goals and objectives. These studies are key to describing how the technologies contribute to improving domestic energy infrastructure in a clean, efficient manner. This effort focuses on hydrogen generation technologies, which have received recent attention due to their potential role in economy-wide decarbonization. In particular, the study is part of a series of investigations at NETL that seek to understand the techno-economic impacts of including SOC technology in energy production, hydrogen production, and/or storage configurations. The objective of this study is to establish a detailed TEA to assess the effectiveness of incremental technology improvements needed for solid oxide electrolysis cell (SOEC) technology to achieve the U.S. DOE’s Hydrogen Shot goal of hydrogen production at less than $1 per kilogram. To take advantage of the benefits of economies of scale, the SOEC hydrogen facilities are sized to produce ≈250,000 metric tons of hydrogen annually with an electrolysis load of one gigawatt (direct current). Some additional critical assumptions include stacks that operate near the thermo-neutral voltage of 1.28 V to avoid adverse thermal gradients, all necessary steam and heat is generated by electric boilers and heaters to enable green hydrogen production, and an air sweep is used to control the oxygen concentration in the air electrode exhaust stream. System efficiency and levelized costs of hydrogen (LCOH) for each case are presented.

Hackett, Gregory↗

On the cause of equatorial spread F.

It is suggested that convective electric fields in the equatorial ionosphere are generated by neutral winds (zonal or meridional) which act on regions having structure in their field aligned Pedersen conductivity integrals. The conductivity structure is presumably caused by long-lived metallic ions concentrated irregularly below the F layer at altitudes where their collision and gyrofrequencies are comparable. The resulting plasma convection leads to large-scale irregularities and sets up gradients in the electric field that drive other instability mechanisms to produce small-scale irregularities. The mechanism proposed requires a different velocity above and below 200 km for winds in the magnetic east-west direction, but for winds in the magnetic meridian direction, an altitude gradient is not required.

Hanson, W. B.↗

Geysering inhibitor for vertical cryogenic transfer piping

Geysering (i.e., the expulsion of boiling liquid and its vapor from a vertical tube) has been a problem for the missile industry in long vertical cryogenic propellant feed lines connecting the launch vehicle propellant tank with the rocket engines. A proposed novel method of inhibiting geysering and the associated pressure gradients provides a self-starting self-regulating action that is not dependent on other active systems or components. The inhibiting action is attained by incorporating a concentric tube within the main transfer tube to prevent constriction of natural convective flow.

Howard, F. S.↗

Convective and interfacial instabilities during solidification of succinonitrile containing ethanol

Even though slow convective flow is difficult to detect in solidifying metals, it can readily be observed in transparent materials by observing the motion of small neutrally buoyant particles. Succinonitrile, which solidifies with an unfaceted solid/liquid interface and has well characterized physical properties, is considered an excellent material for such studies. For studies of solute-induced convection, ethanol is a useful addition to succinonitrile since it has a lower density and a somewhat similar molecular structure. Samples of high purity and ethanol-doped succinonitrile are unidirectionally solidified in a vertical temperature gradient. Latex mimcrospheres 2 microns in diameter are suspended in the liquid to reveal the convective flow. Convective and morphological stability is observed as a function of solute concentration and growth velocity. These measurements are compared with theoretical calculations that predict the transition from stability to instability as a function of solidification conditions. The predicted transitions occur at low concentrations and solidification velocities; for this reason, extreme care must be taken in order to eliminate the effects of impurities or thermally induced convection.

Schaefer, R. J.↗

Enhanced Habitability on High Obliquity Bodies near the Outer Edge of the Habitable Zone of Sun-Like Stars

High obliquity planets represent potentially extreme limits of terrestrial climate, as they exhibit large seasonality, a reversed annual-mean pole-to-equator gradient of stellar heating, and novel cryospheres. A suite of 3D global climate model simulations is performed for low and high obliquity planets with various stellar fluxes, CO2 concentrations, and initial conditions to explore the propensity for high obliquity climates to undergo global glaciation. We also simulate planets with thick CO2 or H2 atmospheres, such as those expected to develop near or beyond the outer edge of the habitable zone. We show that high obliquity planets are hotter than their low obliquity counterparts due to ice-albedo feedbacks for cold climates, and water vapor in warm climates. We suggest that the water vapor greenhouse trapping is greater on high obliquity bodies for a given global-mean temperature due to the different dynamical regimes that occur between the two states. While equatorial ice belts are stable at high obliquity in some climate regimes, it is substantially harder to achieve global glaciation than for a low obliquity planet. Temperate polar conditions can be present at high obliquity at forcings for which low obliquity planets would be in a hard snowball state. Furthermore, open ocean can persist even in the winter hemisphere and when global-mean temperatures are well below freezing. However, the influence of obliquity diminishes for dense atmospheres, in agreement with calculations from 1D energy balance models.

Planet and satellite atmospheres↗