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At least 829 records · Page 46

Heterointercalation in Chevrel-Phase Sulfides: A Model Periodic Solid for the Investigation of Chain Electron Transfer

Modulation of electron density localization on periodic crystal solids through electron transfer from interstitial cations can directly influence the bonding configurations of small-molecule intermediates at the catalyst binding site. This study presents the microwave-assisted solid-state synthesis of four heterointercalant Chevrel-phase (CP) sulfides with varying metal cation intercalants with compositional and electronic structure investigations of the electron density redistribution as a result of intercalation. The heterointercalant CP sulfides, with the general formula Cu x M y Mo 6 S 8 (where M = Cr, Mn, Fe, Ni; x, y = 1.5−2.5), are presented here for the probe reaction of electrochemical CO 2 reduction. A change in product selectivity is observed toward the production of methanol at low overpotentials of −0.5 V vs reversible hydrogen electrode (RHE), as a result of the intercalant combination present within the CP interstitial cavity. Structural confirmation of all materials was examined through Rietveld refinement of the powder X-ray diffraction (PXRD) data, high-resolution transmission electron microscopy (HR-TEM), and selected-area electron diffraction (SAED). Electron transfer from the intercalated metal cations to the Mo 6 S 8 cluster was investigated via X-ray photoelectron spectroscopy (XPS) of the intercalated metal cations and the chalcogenide cluster. Electron transfer was further confirmed through X-ray absorption analysis (XAS) of the K-edges of Mo and intercalants. Intermediate studies of electrochemical reduction of formaldehyde to methanol resulted in a faradaic efficiency of ∼78% methanol production on Cu x Ni y Mo 6 S 8 . The results presented herein identify distinct principles for materials design that can be utilized in other compositional spaces within the broad families of periodic crystal solids.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Tetracene Functionalized Si(111) Achieves Enhanced Solar-to-Chemical Energy Conversion via Molecular Acceptor States

The properties of semiconductor|liquid interfaces play a critical role in determining the efficiency of solar-to-hydrogen (STH) conversion. Here, we investigate how molecular functionalization of Si(111) and Si(111)|TiO 2 surfaces impacts photoelectrochemical (PEC) hydrogen production efficiency. We find that functionalization of ∼3% of the atop sites of Si(111) with either 9-anthracene (Anth) or 5-tetracene (Tet), with the remaining sites passivated by methyl groups, provides substrates with high electronic quality and low surface oxide densities, as determined by X-ray photoelectron spectroscopy (XPS) measurements. Surface photovoltage (SPV) spectroscopy shows that surfaces modified with Anth or Tet exhibit an increased photovoltage, with Tet-functionalized surfaces yielding an additional 192 meV relative to methyl-terminated Si(111), indicating improved charge separation for Si-Tet. Further improvement in onset potential was achieved by replacing a nitrogen-containing TiO 2 atomic layer deposition (ALD) precursor (TDMAT) with a precursor lacking nitrogen (TTIP), which eliminates the parasitic defect band in the TiO 2 overlayer (p-Si(111)-Tet|TTIP-TiO 2 |Pt: V OC = +0.283 ± 0.041 V vs RHE). Density functional theory (DFT) analysis demonstrates that compared with Anth-modified Si(111), the Tet-modified surface exhibits more hybridized Si(111)-Tet states closer to the silicon band edges. Mercury contact current–voltage (I–V, dark) measurements quantified the relative interfacial density of states of Si-Tet, Si-Anth and Si-Me surfaces─revealing that the interfacial state density was highest for Si-Tet. This suggests that such hybridized interfaces serve to capture better photoexcited charge, which enables facile electron transfer to molecular acceptors in solution. Altogether, the data indicate that beneficial hybrid molecular LUMO surface states interacting with the Si conduction band edge results in improved hydrogen evolution (HER) performance for p-Si devices.

Group theory↗

Tuning Solid Electrolyte Interphase Formation before Plating Onset in Anode-Free Sodium Batteries

Sodium (Na) batteries are of growing interest due to the higher earth abundance of sodium than lithium, as well as their promising theoretical energy density when metallic Na anodes are used. However, Na plating and stripping are heavily influenced by the physicochemical properties of the solid electrolyte interphase (SEI), which is directly influenced by the solvent and salt used for the electrolyte. While most studies focus on the SEI that forms on the surface of Na metal after plating, we expand this analysis by identifying a nanoscale “pre-plating” SEI that forms on the current collector (CC) prior to the onset of Na plating. Here, we systematically investigate an array of Na salt and glyme solvents in the electrolyte and determine the associated impacts on pre-plating SEI formation on aluminum CCs. By combining analytical electrochemistry approaches with a multimodal suite of spectroscopy techniques (X-ray, infrared, and Raman), supported by density functional theory calculations, we reveal a direct correlation between the Na + coordination environment and pre-plating SEI composition. We find that longer-chain glymes produce larger proportions of organic alkoxide products in the interphase, consistent with increased Na + −glyme interactions, while the fraction of salt-derived inorganic products (e.g., NaF) correlates with Na + −anion coordination. These insights highlight the critical influence of electrolyte composition particularly solvent identity and Na + coordination on the initial SEI formation in anode-free Na batteries.

anode-free batteries↗

Soil Organic Matter Temperature Sensitivity Cannot be Directly Inferred From Spatial Gradients

Developing and testing decadal-scale predictions of soil response to climate change is difficult because there are few long-term warming experiments or other direct observations of temperature response. As a result, spatial variation in temperature is often used to characterize the influence of temperature on soil organic carbon (SOC) stocks under current and warmer temperatures. This approach assumes that the decadal-scale response of SOC to warming is similar to the relationship between temperature and SOC stocks across sites that are at quasi steady state; however, this assumption is poorly tested. We developed four variants of a Reaction-network-based model of soil organic matter and microbes using measured SOC stocks from a 4,000-km latitudinal transect. Each variant reflects different assumptions about the temperature sensitivities of microbial activity and mineral sorption. All four model variants predicted the same response of SOC to temperature at steady state, but different projections of transient warming responses. The relative importance of Q max , mean annual temperature, and net primary production, assessed using a machine-learning algorithm, changed depending on warming duration. When mineral sorption was temperature sensitive, the predicted average change in SOC after 100 years of 5 °C warming was –18% if warming decreased sorption or +9% if warming increased sorption. When microbial activity was temperature sensitive but mineral sorption was not, average site-level SOC loss was 5%. Here, we conclude that spatial climate gradients of SOC stocks are insufficient to constrain the transient response; measurements that distinguish process controls and/or observations from long-term warming experiments, especially mineral fractions, are needed.

54 ENVIRONMENTAL SCIENCES↗

Hydrate-filled Fracture Formation at Keathley Canyon 151, Gulf of Mexico, and Implications for Non-vent Sites

Near-vertical hydrate-filled fractures are found in subseafloor marine muds, at both advective methane vent sites and at sites without obvious methane and fluid advection (non-vent sites). At non-vent sites, the mechanisms that transport methane to the fractures and control how hydrate-filled fractures form are not well understood. However, these mechanisms are important to establish, as most of Earth's natural gas hydrate is likely bound in marine mud systems. In this work, we focus on understanding the origin of hydrate and how fracture form at non-vent sites by examining previously hydrate-bearing fractures in conventional cores taken from Keathley Canyon 151, U.S. northern Gulf of Mexico, drilled by the Gas Hydrate Joint Industry Project in 2005. We combine information from well logs, sediment cores, and science party results and add new X-ray computed tomography of archival sections and scanning electron microcopy of core samples to develop a conceptual model. We propose that locally generated microbial methane is transported via diffusion from small pores in marine mud into biomineralized burrows with larger pore size in a process called short-range migration. Hydrate forms in burrows once the methane diffuses into them and the dissolved methane concentration exceeds the solubility threshold. When hydrate fills a burrow, heave from additional hydrate growth places stress on the burrow edges, expands the fracture, and creates additional void space in which methane can diffuse and continue forming hydrate. Fractures slowly propagate in the direction of maximum principal stress.

58 GEOSCIENCES↗

Thank You to Our 2018 Peer Reviewers

On behalf of the journal, AGU, and the scientific community, the Editors would like to sincerely thank those who reviewed manuscripts for Geophysical Research Letters in 2018. The hours reading and commenting on manuscripts not only improves the manuscripts but also increases the scientific rigor of future research in the field. We particularly appreciate the timely reviews, in light of the demands imposed by the rapid review process at Geophysical Research Letters. With the revival of the “major revisions” decisions, we appreciate the reviewers' efforts on multiple versions of some manuscripts. Many of those listed below went beyond and reviewed three or more manuscripts for our journal, and those are indicated in italics. In total, 4,484 referees contributed to 7,557 individual reviews in journal. Thank you again. We look forward to the coming year of exciting advances in the field and communicating those advances to our community and to the broader public.

99 GENERAL AND MISCELLANEOUS↗

CO 2 Release From Pockmarks on the Chatham Rise‐Bounty Trough at the Glacial Termination

Abstract Seafloor pockmarks of varying size occur over an area of 50,000 km 2 on the Chatham Rise, Canterbury Shelf and Inner Bounty Trough, New Zealand. The pockmarks are concentrated above the flat‐subducted Hikurangi Plateau. Echosounder data identify recurrent episodes of pockmark formation at ~100,000‐year frequency coinciding with Pleistocene glacial terminations. Here we show that there are structural conduits beneath the larger pockmarks through which fluids flowed upward toward the seafloor. Large negative Δ 14 C excursions are documented in marine sediments deposited next to these subseafloor conduits and pockmarks at the last glacial termination. Modern pore waters contain no methane, and there is no negative δ 13 C excursion at the glacial termination that would be indicative of methane or mantle‐derived carbon at the time the Δ 14 C excursion and pockmarks were produced. An ocean general circulation model equipped with isotope tracers is unable to simulate these large Δ 14 C excursions on the Chatham Rise by transport of hydrothermal carbon released from the East Pacific Rise as previous studies suggested. Here we attribute the Δ 14 C anomalies and pockmarks to release of 14 C‐dead CO 2 and carbon‐rich fluids from subsurface reservoirs, the most likely being dissociated Mesozoic carbonates that subducted beneath the Rise during the Late Cretaceous. Because of the large number of pockmarks and duration of the Δ 14 C anomaly, the pockmarks may collectively represent an important source of 14 C‐dead carbon to the ocean during glacial terminations.

Stott, Lowell↗

Testing the Recycled Gabbro Hypothesis for the Origin of “Ghost Plagioclase” Melt Signatures Using 87 Sr/ 86 Sr of Individual Olivine-Hosted Melt Inclusions From Hawai'i

Melt inclusions with large, positive Sr anomalies have been described in multiple tectonic settings, and the origins of this unusual geochemical feature are debated. Three origins have been proposed, all involving plagioclase as the source of the elevated Sr: (i) direct assimilation of plagioclase-rich lithologies, (ii) recycled lower oceanic gabbro in the mantle source, and (iii) shallow-level diffusive interaction between present day lower oceanic crust (i.e., plagioclase-bearing lithologies) and the percolating melt. A “ghost plagioclase” signature (i.e., a large, positive Sr anomaly without associated high Al 2 O 3 ) is present in melt inclusions from Mauna Loa. Here, we present new 87 Sr/ 86 Sr measurements of individual olivine-hosted melt inclusions from three Hawaiian volcanoes, Mauna Loa, Loihi, and Koolau. The data set includes a Mauna Loa melt inclusion with the highest reported Sr anomaly (or highest (Sr/Ce) N , which is 7.2) for Hawai'i. All melt inclusions have 87 Sr/ 86 Sr values within the range reported previously for the lavas from each volcano. Critically, the 87 Sr/ 86 Sr of the high (Sr/Ce) N melt inclusion lies within the narrow range of 87 Sr/ 86 Sr for Mauna Loa melts that lack high (Sr/Ce) N signatures. Therefore, to explain the high (Sr/Ce) N ratio of the ghost plagioclase signature using an ancient recycled gabbro, the gabbro-infused mantle source would have had to evolve, by chance, to have the same 87 Sr/ 86 Sr as the source of the Mauna Loa melts that lack a recycled gabbro (ghost plagioclase) signature. Alternatively, shallow-level diffusive interactions between Mauna Loa plagioclase-rich cumulates and a percolating mantle-derived melt provides a simpler explanation for the presence of the high (Sr/Ce) N Mauna Loa melts.

58 GEOSCIENCES↗

The dominant contribution of Southern Ocean heat uptake to time - evolving radiative feedback in CESM

Radiative feedbacks are found to vary with time in both historical records and future warming projections. Previous studies proposed two factors that determine the variation of radiative feedbacks: (i) the evolution of tropical sea surface warming patterns and (ii) the tropical-extratropical contrast of ocean heat uptake. Our results bridge the two factors by evaluating the remote impact from the extratropical ocean on tropical temperature patterns, accounting for the changes in radiative feedbacks. Based on the Green’s Function approach that quantifies the non-local contributions of regional ocean heat uptake, we show that the net radiative feedback evolution in CESM can be mostly attributed to the heat uptake variations in the Southern Ocean. The enhanced surface warming associated with the weakened heat uptake decades after quadrupling CO2 is not confined over the Southern Ocean, but extends to tropical Southeastern Pacific, which leads to decreasing tropospheric stability and more positive cloud feedbacks.

Lin, Yuan-Jen↗

Exploring Sources of Surface Bias in HRRR Using New York State Mesonet

In recent years, there has been increasing demand for applications of short-term forecasting of renewable energy potential and assessments of the likelihood of extreme weather events using the High-Resolution Rapid Refresh (HRRR) model. Examining the biases in the newest version of HRRR is necessary to promote further model development. Using data from one of the most comprehensive and dense monitoring networks, New York State Mesonet (NYSM), we evaluate the HRRR version 3 meteorological fields for an entire year. In this work, the land-atmosphere-cloud coupling system is evaluated as an integrated whole. We investigate the physical processes influencing the soil hydrological balance and the thermodynamic interactions, from surface fluxes up to the level of boundary layer convection from both temporal (seasonal and diurnal) and spatial perspectives. Results show that the model 2 m temperature and humidity biases are seasonally dependent, with warm and dry bias present during the warm season, and an extreme nocturnal cold bias in winter. The summer warm bias includes both a land-surface-induced bias and a cloud-induced bias. Inaccurate representation of energy partition and soil hydrological process across different land use types as well as a hydrological bias in describing spring snowmelt are identified as the main source of the land-surface-induced bias. A feedback loop linking cloud presence, flux changes, and temperature contributes to the cloud-induced bias. The positive solar radiation bias increases from clear sky to overcast sky conditions. The most significant bias occurs during overcast and thick cloud conditions associated with frontal passage and thunderstorms.

54 ENVIRONMENTAL SCIENCES↗

Adaptation Strategies Strongly Reduce the Future Impacts of Climate Change on Simulated Crop Yields

Abstract Simulations of crop yield due to climate change vary widely between models, locations, species, management strategies, and Representative Concentration Pathways (RCPs). To understand how climate and adaptation affects yield change, we developed a meta‐model based on 8703 site‐level process‐model simulations of yield with different future adaptation strategies and climate scenarios for maize, rice, wheat and soybean. We tested 10 statistical models, including some machine learning models, to predict the percentage change in projected future yield relative to the baseline period (2000–2010) as a function of explanatory variables related to adaptation strategy and climate change. We used the best model to produce global maps of yield change for the RCP4.5 scenario and identify the most influential variables affecting yield change using Shapley additive explanations. For most locations, adaptation was the most influential factor determining the projected yield change for maize, rice and wheat. Without adaptation under RCP4.5, all crops are expected to experience average global yield losses of 6%–21%. Adaptation alleviates this average projected loss by 1–13 percentage points. Maize was most responsive to adaptive practices with a projected mean yield loss of −21% [range across locations: −63%, +3.7%] without adaptation and −7.5% [range: −46%, +13%] with adaptation. For maize and rice, irrigation method and cultivar choice were the adaptation types predicted to most prevent large yield losses, respectively. When adaptation practices are applied, some areas are predicted to experience yield gains, especially at northern high latitudes. These results reveal the critical importance of implementing adequate adaptation strategies to mitigate the impact of climate change on crop yields.

54 ENVIRONMENTAL SCIENCES↗

A Continental-Scale Estimate of Soil Organic Carbon Change at NEON Sites and Their Environmental and Edaphic Controls

Current carbon cycle models focus on the effects of climate and land-use change on primary productivity and microbial-mineral dependent carbon turnover in the topsoil, while less attention has been paid to vertical soil processes and soil-dependent response to land-use change along the profile. In this study, a spatial-temporal analysis was used to estimate soil organic carbon (SOC) change in topsoil/A horizon and subsoil/B horizon at National Ecological Observatory Network (NEON) sites, USA over 30 years. To separate the effects of land-use, environmental, and edaphic factors on SOC change, space-for-time substitution was used in combination with the Continuous Change Detection and Classification algorithm and Structural Equation Modeling. Results showed that (a) under natural vegetation, Spodosols and Inceptisols found in the eastern NEON sites had substantial topsoil SOC accumulation (+0.4 to +1.2 Mg C ha –1 year –1 ), while Inceptisols and Andisols in the west had a comparable magnitude of topsoil SOC loss (–0.5 to –1.8 Mg C ha –1 year –1 ); (b) Mollisols and Alfisols in the Central Plains sites were susceptible to significant SOC loss under farming and grazing; (c) Runoff/erosion and leaching potential, vertical translocation, and mineral sorption were the most important factors controlling SOC variation across the NEON sites. Our work could be used to parameterize ecosystem models simulating SOC change.

54 ENVIRONMENTAL SCIENCES↗

Representing Soil Microbial Dynamics and Organo‐Mineral Interactions in the E3SM Land Model (ELM‐ReSOM)

Explicit representation of soil microbial processes and interactions with biotic and abiotic processes in Earth System Models (ESMs) remains limited, despite their importance in biogeochemical cycles. To address this gap, which hinders prediction of global biogeochemial cycling and responses to atmospheric conditions, we integrated a microbe- and mineral-surface-explicit model, the Reaction-network-based model of soil organic matter and Microbes (ReSOM), into the Energy Exascale ESM (E3SM) land model (ELM). Here, we describe ELM-ReSOM and show a case study at a conifer forest in California. ELM-ReSOM accurately simulated surface CO 2 fluxes and SOM stocks, demonstrating improved representations of microbial and mineral interactions compared to the default ELM. We examined ELM-ReSOM sensitivity to microbial traits, enzyme properties, and organo-mineral interactions. Microbial traits such as the maximum mortality rate, transporter-density scaling factor, and maximum monomer assimilation rate were strong controllers of heterotrophic respiration, while these microbial traits and enzyme-related properties collectively influenced SOM stocks. Mineral surfaces primarily affected SOM stocks by adsorbing enzymes, thereby limiting depolymerization. Synergies among processes led to stronger impacts of parameters when evaluated together versus separately (i.e., most parameters had greater indirect than direct effects). For example, due to interactions of microbial necromass with mineral surface adsorption, the indirect effect of the maximum microbial mortality rate was 33% larger than its direct effect on SOM stock. Thus, microbial and enzyme dynamics and their interactions with mineral surfaces play critical roles in SOM cycling. Tackling the challenges of microbe-explicit models will advance understanding and modeling of SOM dynamics.

Tao, Jing [Lawrence Berkeley National Laboratory (↗

Recon3D enables a three-dimensional view of gene variation in human metabolism

Genome-scale network reconstructions have helped uncover the molecular basis of metabolism. Here we present Recon3D, a computational resource that includes three-dimensional (3D) metabolite and protein structure data and enables integrated analyses of metabolic functions in humans. We use Recon3D to functionally characterize mutations associated with disease, and identify metabolic response signatures that are caused by exposure to certain drugs. Recon3D represents the most comprehensive human metabolic network model to date, accounting for 3,288 open reading frames (representing 17% of functionally annotated human genes), 13,543 metabolic reactions involving 4,140 unique metabolites, and 12,890 protein structures. As a result, these data provide a unique resource for investigating molecular mechanisms of human metabolism.

59 BASIC BIOLOGICAL SCIENCES↗

Observation of a single protein by ultrafast X-ray diffraction

The idea of using ultrashort X-ray pulses to obtain images of single proteins frozen in time has fascinated and inspired many. It was one of the arguments for building X-ray free-electron lasers. According to theory, the extremely intense pulses provide sufficient signal to dispense with using crystals as an amplifier, and the ultrashort pulse duration permits capturing the diffraction data before the sample inevitably explodes. This was first demonstrated on biological samples a decade ago on the giant mimivirus. Since then, a large collaboration has been pushing the limit of the smallest sample that can be imaged. The ability to capture snapshots on the timescale of atomic vibrations, while keeping the sample at room temperature, may allow probing the entire conformational phase space of macromolecules. Here we show the first observation of an X-ray diffraction pattern from a single protein, that of Escherichia coli GroEL which at 14 nm in diameter is the smallest biological sample ever imaged by X-rays, and demonstrate that the concept of diffraction before destruction extends to single proteins. From the pattern, it is possible to determine the approximate orientation of the protein. Our experiment demonstrates the feasibility of ultrafast imaging of single proteins, opening the way to single-molecule time-resolved studies on the femtosecond timescale.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗