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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 829 records · Page 46
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters

Abstract With an ever-increasing amount of (meta)genomic data being deposited in sequence databases, (meta)genome mining for natural product biosynthetic pathways occupies a critical role in the discovery of novel pharmaceutical drugs, crop protection agents and biomaterials. The genes that encode these pathways are often organised into biosynthetic gene clusters (BGCs). In 2015, we defined the Minimum Information about a Biosynthetic Gene cluster (MIBiG): a standardised data format that describes the minimally required information to uniquely characterise a BGC. We simultaneously constructed an accompanying online database of BGCs, which has since been widely used by the community as a reference dataset for BGCs and was expanded to 2021 entries in 2019 (MIBiG 2.0). Here, we describe MIBiG 3.0, a database update comprising large-scale validation and re-annotation of existing entries and 661 new entries. Particular attention was paid to the annotation of compound structures and biological activities, as well as protein domain selectivities. Together, these new features keep the database up-to-date, and will provide new opportunities for the scientific community to use its freely available data, e.g. for the training of new machine learning models to predict sequence-structure-function relationships for diverse natural products. MIBiG 3.0 is accessible online at https://mibig.secondarymetabolites.org/.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

The cis-regulatory codes of response to combined heat and drought stress in Arabidopsis thaliana

Abstract Plants respond to their environment by dynamically modulating gene expression. A powerful approach for understanding how these responses are regulated is to integrate information about cis-regulatory elements (CREs) into models called cis-regulatory codes. Transcriptional response to combined stress is typically not the sum of the responses to the individual stresses. However, cis-regulatory codes underlying combined stress response have not been established. Here we modeled transcriptional response to single and combined heat and drought stress in Arabidopsis thaliana. We grouped genes by their pattern of response (independent, antagonistic and synergistic) and trained machine learning models to predict their response using putative CREs (pCREs) as features (median F-measure = 0.64). We then developed a deep learning approach to integrate additional omics information (sequence conservation, chromatin accessibility and histone modification) into our models, improving performance by 6.2%. While pCREs important for predicting independent and antagonistic responses tended to resemble binding motifs of transcription factors associated with heat and/or drought stress, important synergistic pCREs resembled binding motifs of transcription factors not known to be associated with stress. These findings demonstrate how in silico approaches can improve our understanding of the complex codes regulating response to combined stress and help us identify prime targets for future characterization.

Azodi, Christina B.↗
DOE OSTI2021

High-throughput search for magnetic topological materials using spin-orbit spillage, machine learning, and experiments

Magnetic topological insulators and semi-metals have a variety of properties that make them attractive for applications including spintronics and quantum computation. Here, we use systematic high-throughput density functional theory calculations to identify magnetic topological materials from the ≈ 40000 three-dimensional materials in the JARVIS-DFT database. First, we screen materials with net magnetic moment > 0.5 μB and spin-orbit spillage > 0.25, resulting in 25 insulating and 564 metallic candidates. The spillage acts as a signature of spin-orbit induced band-inversion. Then, we carry out calculations of Wannier charge centers, Chern numbers, anomalous Hall conductivities, surface bandstructures, and Fermi-surfaces to determine interesting topological characteristics of the screened compounds. We also train machine learning models for predicting the spillage, bandgaps, and magnetic moments of new compounds, to further accelerate the screening process. We experimentally synthesize and characterize a few candidate materials to support our theoretical predictions.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2024

Picasso: Memory-Efficient Graph Coloring Using Palettes With Applications in Quantum Computing

A coloring of a graph is an assignment of colors to vertices such that no two neighboring vertices have the same color. The need for memory-efficient coloring algorithms is motivated by their application in computing clique partitions of graphs arising in quantum computations where the objective is to map a large set of Pauli strings into a compact set of unitaries. We present Picasso, a randomized memory-efficient iterative parallel graph coloring algorithm with theoretical sublinear space guarantees under practical assumptions. The parameters of our algorithm provide a trade-off between coloring quality and resource consumption. To assist the user, we also propose a machine learning model to predict the coloring algorithm’s parameters considering these trade-offs. We provide a sequential and a parallel implementation of the proposed algorithm. We perform an experimental evaluation on a 64-core AMD CPU equipped with 512 GB of memory and an Nvidia A100 GPU with 40GB of memory. For a small dataset where existing coloring algorithms can be executed within the 512 GB memory budget, we show up to 68× memory savings. On massive datasets we demonstrate that GPU-accelerated Picasso can process inputs with 49.5× more Pauli strings (vertex set in our graph) and 2,478× more edges than state-of-the-art parallel approaches.

artificial intelligence, quantum computing↗
DOE OSTI2022

Neural network accelerator for quantum control

Efficient quantum control is necessary for practical quantum computing implementations with current technologies. Conventional algorithms for determining optimal control parameters are computationally expensive, largely excluding them from use outside of the simulation. Existing hardware solutions structured as lookup tables are imprecise and costly. By designing a machine learning model to approximate the results of traditional tools, a more efficient method can be produced. Such a model can then be synthesized into a hardware accelerator for use in quantum systems. In this study, we demonstrate a machine learning algorithm for predicting optimal pulse parameters. This algorithm is lightweight enough to fit on a low-resource FPGA and perform inference with a latency of 175 ns and pipeline interval of 5 ns with > 0.99 gate fidelity. In the long term, such an accelerator could be used near quantum computing hardware where traditional computers cannot operate, enabling quantum control at a reasonable cost at low latencies without incurring large data bandwidths outside of the cryogenic environment.

43 PARTICLE ACCELERATORS↗
DOE OSTI2025

A high-throughput experimentation platform for data-driven discovery in electrochemistry

Automating electrochemical analyses combined with artificial intelligence is poised to accelerate discoveries in renewable energy sciences and technologies. This study presents an automated high-throughput electrochemical characterization (AHTech) platform as a cost-effective and versatile tool for rapidly assessing liquid analytes. The Python-controlled platform combines a liquid handling robot, potentiostat, and customizable microelectrode bundles for diverse, reproducible electrochemical measurements in microtiter plates, minimizing chemical consumption and manual effort. To showcase the capability of AHTech, we screened a library of 180 small molecules as electrolyte additives for aqueous zinc metal batteries, generating data for training machine learning models to predict Coulombic efficiencies. Key molecular features governing additive performance were elucidated using Shapley Additive exPlanations and Spearman’s correlation, pinpointing high-performance candidates like cis-4-hydroxy-d-proline, which achieved an average Coulombic efficiency of 99.52% over 200 cycles. The workflow established herein is highly adaptable, offering a powerful framework for accelerating the exploration and optimization of extensive chemical spaces across diverse energy storage and conversion fields.

Lin, Dian-Zhao [Johns Hopkins University, Baltimor↗
DOE OSTI2023

Ground Water Age Predictor

Machine Learning script to predict groundwater ages based on auxiliary features in a publicly available dataset, based on publicly available software libraries. Code applied to data from the Groundwater Ambient Monitoring and Assessment (GAMA) program in California, including well location and construction information, chemical constituents and isotopic tracers, and land use metrics.

Chakraborty, Indrasis↗
DOE OSTI2024

Code Description for "Brief Communication: Monitoring snow depth using small, cheap, and easy-to-deploy ground surface temperature sensors"

Temporally continuous snow depth estimates are vital for understanding changing snow patterns and impacts on permafrost in the Arctic. We train a random forest machine learning model to predict snow depth from variability in ground surface temperature. To our knowledge, this is the first time that small ground surface temperature sensors have been used to estimate snow depth. The model performs well at sites where the model was trained and at pan-arctic evaluation sites (RMSE <= 0.15 m). Small temperature sensors are cheap and easy-to-deploy, so this technique enables spatially distributed and temporally continuous snowpack monitoring to an extent previously infeasible. The model is flexible and can be applied to datasets retroactively to retrieve snow depth estimates at additional sites. This code package includes a *.joblib file of the trained random forest model and a *.ipynb file showing how to clean input data, train the random forest model, and apply the model.

Bachand, Claire↗
DOE OSTI2025

Divertor Plasma Detachment Control Neural Network

DivControlNN is a state-of-the-art software tool that leverages advanced machine learning techniques to predict and control divertor plasma behavior in fusion reactors. Plasma, a highly energetic and electrically charged gas, requires meticulous management to protect reactor components and maintain optimal energy production. Conventional simulation methods, although extremely detailed, typically demand extensive computational time-making them unsuitable for real-time control scenarios. DivControlNN addresses this challenge by learning from tens of thousands of high-fidelity simulations, thereby creating a rapid surrogate model that can deliver near-instantaneous predictions. At the core of its functionality is a sophisticated technique known as latent space mapping, which condenses complex, high-dimensional plasma data into a compact, lower-dimensional representation. This streamlined representation enables the system to quickly forecast essential plasma properties and determine the precise conditions required for effective detachment. Detachment is a crucial process in which the plasma is cooled before reaching the divertor plates, thereby reducing heat loads and mitigating material erosion. In recent experiments conducted on the KSTAR tokamak in South Korea, DivControlNN successfully guided the detachment process without any fine-tuning-even when applied to a new tungsten divertor configuration. By achieving a computational speed-up of over one hundred million times compared to traditional simulation methods while maintaining low prediction errors, DivControlNN stands to significantly enhance real-time control and diagnostic capabilities in future fusion reactors. This breakthrough paves the way for safer, more reliable reactor operation and represents a major advancement toward realizing fusion energy as a practical, sustainable, and clean power source.

Xu, Xueqiao [Lawrence Livermore National Laborator↗
DOE OSTI2025

High-resolution leaf area index maps generated from unoccupied aerial system, Teller Mile 27, Seward Peninsula, Alaska

Leaf area index (LAI), a measure of the amount of one-side leaf area per ground unit, is an important indicator of plant carbon, energy, and water cycle. In the heterogeneous Arctic landscapes, it has been challenging to accurately measure LAI across species and space needed for Earth system model validation. Here, we use multispectral unoccupied aerial systems (UASs) to scale up and map leaf area index (LAI) , in a low-Arctic tundra landscape on the Seward Peninsula, Alaska. We linked previous published LAI measurements with high-resolution, UAS-collected multispectral data collected over the region of Next Generation Ecosystem Experiments in the Arctic (NGEE Arctic)’s Teller Mile Maker 27 site in 2022 to develop random forest (RF) machine learning models to predict and map LAI. 100 RF models were developed to account for uncertainties in ground LAI plot measurements and process scaling. This dataset includes a raster (*.tif) map of the mean LAI value of the 100 RF models, a raster (*.tif) map of the standard deviation of the RF-modeled LAI data, and a user guide (*.pdf).

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Extracting Material Property Measurement Data from Scientific Articles

Machine learning-based prediction of material properties is often hampered by the lack of sufficiently large training datasets. The majority of such measurement data is embedded in scientific literature and the ability to automatically extract these data is essential to support the development of reliable property prediction methods. In this work, we describe a methodology for an automatic property extraction framework using material solubility as the target property. We create an annotated dataset containing tags for solubility-related entities using a combination of regular expressions and manual tagging. We then compare five entity recognition models leveraging both token-level and span-level architectures on the task of classifying solute names, solubility values, and solubility units. Additionally, we explore a novel pretraining approach that leverages automated chemical name and quantity extraction tools to generate large datasets that do not rely on intensive manual effort. Finally, we perform an analysis to identify the causes of classification errors.

Panapitiya, Gihan U.↗
DOE OSTI2021

Representing the Unrepresented Impact of River Ice on Hydrology, Biogeochemistry, Vegetation, and Geomorphology: A Hybrid Physics-Machine Learning Approach

Focal areas include: Predictive modeling through the use of AI techniques and AI-derived model components; the use of AI and other tools to design a prediction system composed of a hierarchy of models (e.g., AI driven model/component/parameterization selection). Insight gleaned from complex data (both observed and simulated) using AI, big data analytics, and other advanced methods, including explainable AI and physics- or knowledge-guided AI.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

"Russians in the Grid" Enrichment Process

Threat intelligence sources are numerous, and the quality of their intelligence is equally variable. The need for quality, actionable, and shareable intelligence is becoming increasingly important as cyber-threats continue to increase. In this paper, we describe the process we used to enrich U.S. CERT’s Technical Alert entitled “Russian Government Cyber-Activity Targeting Energy and Other Critical Infrastructure Sectors,” affectionately referred to as “Russians In the Grid,” from a series of separate but related reports to a final, actionable, unified Structured Threat Information Expression (STIX) v2 representation of the report. In the process, we detail the tools and procedures we used, some of which are automated and others highly manual. We identify some of the limitations of current STIX enrichment tools and techniques, and propose enhancements to allow for more effective enrichment and better overall threat intelligence to be used for more effective threat data-sharing, as well as machine learning-based predictive threat work being conducted at Idaho National Laboratory.

45 MILITARY TECHNOLOGY, WEAPONRY, AND NATIONAL DEF↗
DOE OSTI2025

1 × 1 km maps of abundances of eight enzyme functional classes for soil C, N, and P cycling across the CONUS

This dataset includes eight 1 × 1 km maps of the abundances of eight enzyme functional classes (EFC) for soil C, N, and P cycling across the CONUS. These mappings are predicted by the machine learning model trained using metagenomics and the corresponding environmental data. This item corresponds to our article: Fan, C., Song, Y., Mishra, U., Gautam, S., & Mayes, M. A. (2025). Harnessing the Power of Machine Learning and Omics to Identify Environmental Regulation on Microbial Functional Composition for Soil C, N, and P Cycling. Journal of Geophysical Research: Biogeosciences, 130(10).

1 × 1 km↗
DOE OSTI2025

Spatiotemporal Downscaling Model for Solar Irradiance Forecast Using Nearest-Neighbor Random Forest and Gaussian Process

Accurate solar photovoltaic (PV) capacity estimation requires high-resolution, site-specific solar irradiance data to account for localized variability. However, global datasets, such as the National Solar Radiation Database (NSRDB), provide regional averages that fail to capture the fine-scale fluctuations critical for large-scale grid integration. This limitation is particularly relevant in the context of increasing distributed energy resources (DERs) penetration, such as rooftop PV. Additionally, it is critical to the implementation of the U.S. Federal Energy Regulatory Commission (FERC) Order 2222, which facilitates DER participation in U.S. bulk power markets. To address this challenge, this study evaluates Nearest-Neighbor Random Forest (NNRF) and Nearest-Neighbor Gaussian Process (NNGP) models for spatiotemporal downscaling of global solar irradiance data. By leveraging historical irradiance and meteorological data, these models incorporate spatial, temporal, and feature-based correlations to enhance local irradiance predictions. The NNRF model, a machine-learning approach, prioritizes computational efficiency and predictive accuracy, while the NNGP model offers a level of interpretability and prediction uncertainty by numerically quantifying correlations and dependencies in the data. Model validation was conducted using day-ahead predictions. The results showed that the average Goodness of Fit (GoF) of the NNRF model of 90.61% across all eight sites outperformed the GoF of the NNGP of 85.88%. Additionally, the computational speed of NNRF was 2.5 times faster than the NNGP. Finally, the NNGP displayed polynomial scaling while the NNRF scaled linearly with increasing number of nearest neighbors. Additional validation of the model on five sites in Puerto Rico further confirmed the superiority of the NNRF model over the NNGP model. These findings highlight the robustness and computational efficiency of NNRF for large-scale solar irradiance downscaling, making it a strong candidate for improving PV capacity estimation and real-time electricity market integration for DERs.

Asiedu, Shadrack (ORCID:0009000646004826)↗
DOE OSTI2025

Brief communication: Monitoring snow depth using small, cheap, and easy-to-deploy snow–ground interface temperature sensors

Abstract. Temporally continuous snow depth estimates are vital for understanding changing snow patterns and impacts on permafrost in the Arctic. We trained a random forest machine learning model to predict snow depth from variability in snow–ground interface temperature. The model performed well on Alaska's Seward Peninsula where it was trained and at Arctic evaluation sites (RMSE ≤ 0.15 m). It performed poorly at temperate sites with deeper snowpacks, partially due to training data limitations. Small temperature sensors are cheap and easy to deploy, so this technique enables spatially distributed and temporally continuous snowpack monitoring at high latitudes to an extent previously infeasible.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

A Learning-based Supervisory Control Architecture for Electric Vehicle Charging System Paired with Energy Storages

A Machine Learning-based predictive model is developed for optimal dispatching energy storage system integrated with Electric Vehicle battery charger. The model is effectively trained using transfer learning algorithm and successfully validated via measurement data to achieve high fidelity and accuracy. The study findings provide possibilities for future development of the presented approach to implement computational heavy predictive algorithms with multi-step predictions in emerging modular bidirectional charger topologies to realize vehicle-to-grid (V2G) technology. The online tuning can be explored using the new measurements obtained during the operation, henceforth, enhancing the controller performance for integrating multiple DERs into distribution power networks that shows huge interest for the utilities and regulatory agencies. Multiple operation scenatios have been evaluated and simulation results are discussed to verify intended performance of the proposed control solution.

24 POWER TRANSMISSION AND DISTRIBUTION↗
DOE OSTI2020

Meta-modeling strategy for data-driven forecasting

Accurately forecasting the weather is a key requirement for climate change mitigation. Data-driven methods offer the ability to make more accurate forecasts, but lack interpretability and can be expensive to train and deploy if models are not carefully developed. Here, we make use of two historical climate data sets and tools from machine learning, to accurately predict temperature fields. Furthermore, we are able to use low fidelity models that are cheap to train and evaluate, to selectively avoid expensive high fidelity function evaluations, as well as uncover seasonal variations in predictive power. This allows for an adaptive training strategy for computationally efficient geophysical emulation.

Skinner, Dominic J↗