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At least 811 records · Page 45

Linking Pharmacogenomic Information on Drug Safety and Efficacy with Ethnic Minority Populations

Numerous prescription drugs’ labeling contains pharmacogenomic (PGx) information to aid health providers and patients in the safe and effective use of drugs. However, clinical studies for such PGx biomarkers and related drug doses are generally not conducted in diverse ethnic populations. Thus, it is urgently important to incorporate PGx information with genetic characteristics of racial and ethnic minority populations and utilize it to promote minority health. In this project a bioinformatics approach was developed to enhance the collection of PGx information related to ethnic minorities to pave the way toward understanding the population-wide utility of PGx information. To address this challenge, we first gathered PGx information from drug labels. Second, we extracted data on the allele frequency information of genetic variants in ethnic minority groups from public resources. Then, we collected published research articles on PGx biomarkers and related drugs for reference. Finally, the data were integrated and formatted to build a new PGx database containing information on known drugs and biomarkers for ethnic minority groups. This database provides scientific information needed to evaluate available PGx information to enhance drug dose selection and drug safety for ethnic minority populations.

60 APPLIED LIFE SCIENCES↗

Predicting Solar Flares Using SDO /HMI Vector Magnetic Data Products and the Random Forest Algorithm

Adverse space-weather effects can often be traced to solar flares, the prediction of which has drawn significant research interests. The Helioseismic and Magnetic Imager (HMI) produces full-disk vector magnetograms with continuous high cadence, while flare prediction efforts utilizing this unprecedented data source are still limited. Here we report results of flare prediction using physical parameters provided by the Space-weather HMI Active Region Patches (SHARP) and related data products. We survey X-ray flares that occurred from 2010 May to 2016 December and categorize their source regions into four classes (B, C, M, and X) according to the maximum GOES magnitude of flares they generated. We then retrieve SHARP-related parameters for each selected region at the beginning of its flare date to build a database. Finally, we train a machine-learning algorithm, called random forest (RF), to predict the occurrence of a certain class of flares in a given active region within 24 hr, evaluate the classifier performance using the 10-fold cross-validation scheme, and characterize the results using standard performance metrics. Compared to previous works, our experiments indicate that using the HMI parameters and RF is a valid method for flare forecasting with fairly reasonable prediction performance. To our knowledge, this is the first time that RF has been used to make multiclass predictions of solar flares. We also find that the total unsigned quantities of vertical current, current helicity, and flux near the polarity inversion line are among the most important parameters for classifying flaring regions into different classes.

79 ASTRONOMY AND ASTROPHYSICS↗

Consulting report on the NASA technology utilization network system

The purposes of this consulting effort are: (1) to evaluate the existing management and production procedures and workflow as they each relate to the successful development, utilization, and implementation of the NASA Technology Utilization Network System (TUNS) database; (2) to identify, as requested by the NASA Project Monitor, the strengths, weaknesses, areas of bottlenecking, and previously unaddressed problem areas affecting TUNS; (3) to recommend changes or modifications of existing procedures as necessary in order to effect corrections for the overall benefit of NASA TUNS database production, implementation, and utilization; and (4) to recommend the addition of alternative procedures, routines, and activities that will consolidate and facilitate the production, implementation, and utilization of the NASA TUNS database.

Hlava, Marjorie M. K.↗

Methods and means used in programming intelligent searches of technical documents

In order to meet the data research requirements of the Safety, Reliability & Quality Assurance activities at Kennedy Space Center (KSC), a new computer search method for technical data documents was developed. By their very nature, technical documents are partially encrypted because of the author's use of acronyms, abbreviations, and shortcut notations. This problem of computerized searching is compounded at KSC by the volume of documentation that is produced during normal Space Shuttle operations. The Centralized Document Database (CDD) is designed to solve this problem. It provides a common interface to an unlimited number of files of various sizes, with the capability to perform any diversified types and levels of data searches. The heart of the CDD is the nature and capability of its search algorithms. The most complex form of search that the program uses is with the use of a domain-specific database of acronyms, abbreviations, synonyms, and word frequency tables. This database, along with basic sentence parsing, is used to convert a request for information into a relational network. This network is used as a filter on the original document file to determine the most likely locations for the data requested. This type of search will locate information that traditional techniques, (i.e., Boolean structured key-word searching), would not find.

Gross, David L.↗

An evaluation of ablative materials for a lunar transfer vehicle aerobrake

An evaluation of the utility of an ablative thermal protection system (TPS) for use on a lunar mission return aerobrake has been completed. Requirements are established and criteria developed specifically for the ablator application. A quantitative and qualitative multi-attribute utility analysis is employed to establish a relative ranking among candidates and a performance threshold. A review of the applicable existing ablator material database is made and appropriate thermochemical/melting ablation analysis is employed to evaluate thermal performance. Ablatives are shown to be potentially both performance capable and cost effective in single-use roles. Reusable surface insulation is also shown to be competitive as an ablator with certain modifications.

Lane, J. G.↗

Structural Life and Reliability Metrics: Benchmarking and Verification of Probabilistic Life Prediction Codes

Over the past two decades there has been considerable effort by NASA Glenn and others to develop probabilistic codes to predict with reasonable engineering certainty the life and reliability of critical components in rotating machinery and, more specifically, in the rotating sections of airbreathing and rocket engines. These codes have, to a very limited extent, been verified with relatively small bench rig type specimens under uniaxial loading. Because of the small and very narrow database the acceptance of these codes within the aerospace community has been limited. An alternate approach to generating statistically significant data under complex loading and environments simulating aircraft and rocket engine conditions is to obtain, catalog and statistically analyze actual field data. End users of the engines, such as commercial airlines and the military, record and store operational and maintenance information. This presentation describes a cooperative program between the NASA GRC, United Airlines, USAF Wright Laboratory, U.S. Army Research Laboratory and Australian Aeronautical & Maritime Research Laboratory to obtain and analyze these airline data for selected components such as blades, disks and combustors. These airline data will be used to benchmark and compare existing life prediction codes.

Litt, Jonathan S.↗

Meeting Expanding Needs to Collect Food Intake Specificity: The Nutrition Data System for Research (NDS-R)

Food and nutrient databases are populated with data obtained from a variety of sources including USDA Reference Tables, scientific journals, food manufacturers and foreign food tables. The food and nutrient database maintained by the Nutrition Coordinating Center (NCC) at the University of Minnesota is continually updated with current nutrient data and continues to be expanded with additional nutrient fields to meet diverse research endeavors. Data are strictly evaluated for reliability and relevance before incorporation into the database; however, the values are obtained from various sources and food samples rather than from direct chemical analysis of specific foods. Precise nutrient values for specific foods are essential to the nutrition program at the National Aeronautics and Space Administration (NASA). Specific foods to be included in the menus of astronauts are chemically analyzed at the Johnson Space Center for selected nutrients. A request from NASA for a method to enter the chemically analyzed nutrient values for these space flight food items into the Nutrition Data System for Research (NDS-R) software resulted in modification of the database and interview system for use by NASA, with further modification to extend the method for related uses by more typical research studies.

VanHeel, Nancy↗

Workload: Measurement and Management

Poster: The workload research project has as its task to survey the available literature on: (1) workload measurement techniques; and (2) the effects of workload on operator performance. The first set of findings provides practitioners with a collection of simple-to-use workload measurement techniques along with characterizations of the kinds of tasks each technique has been shown reliably address. This allows design practitioners to select and use the most appropriate techniques for the task(s) at hand. The second set of findings provides practitioners with the guidance they need to design for appropriate kinds and amounts of workload across all tasks for which the operator is responsible. This guidance helps practitioners design systems and procedures that ensure appropriate levels of engagement across all tasks, and avoid designs and procedures that result in operator boredom, complacency, loss of awareness, undue levels of stress, or skill atrophy that can result from workload that distracts operators from the tasks they perform and monitor, workload levels that are too low, too high, or too consistent or predictable. Only those articles that were peer reviewed, long standing and generally accepted in the field, and applicable to a relevant range of conditions in a select domain of interest, in analogous "extreme" environments to those in space were included. In addition, all articles were reviewed and evaluated on uni-dimensional and multi-dimensional considerations. Casner & Gore also examined the notion of thresholds and the conditions that may benefit mostly from the various methodological approaches. Other considerations included whether the tools would be suitable for guiding a requirement-related and design-related question. An initial review of over 225 articles was conducted and entered into an EndNote database. The reference list included a range of conditions in the domain of interest (subjective/objective measures), the seminal works in workload, as well as summary works

Gore, Brian Francis↗

Semi-Empirical Validation of the Cross-Band Relative Absorption Technique for the Measurement of Molecular Mixing Ratios

Studies were performed to carry out semi-empirical validation of a new measurement approach we propose for molecular mixing ratios determination. The approach is based on relative measurements in bands of O2 and other molecules and as such may be best described as cross band relative absorption (CoBRA). . The current validation studies rely upon well verified and established theoretical and experimental databases, satellite data assimilations and modeling codes such as HITRAN, line-by-line radiative transfer model (LBLRTM), and the modern-era retrospective analysis for research and applications (MERRA). The approach holds promise for atmospheric mixing ratio measurements of CO2 and a variety of other molecules currently under investigation for several future satellite lidar missions. One of the advantages of the method is a significant reduction of the temperature sensitivity uncertainties which is illustrated with application to the ASCENDS mission for the measurement of CO2 mixing ratios (XCO2). Additional advantages of the method include the possibility to closely match cross-band weighting function combinations which is harder to achieve using conventional differential absorption techniques and the potential for additional corrections for water vapor and other interferences without using the data from numerical weather prediction (NWP) models.

Pliutau, Denis↗

The Volatile Composition of Comet C/2017 E4 (Lovejoy) before its Disruption, as Revealed by High-Resolution Infrared Spectroscopy with iSHELL at the NASA/IRTF

In 2017 April, we acquired comprehensive high-resolution spectra of newly discovered comet C/2017 E4 (Lovejoy) as it approached perihelion, and before its disintegration. We detected many cometary emission lines in the range (2.8-5.3) μm, in four customized instrument settings (L1-c, L3, Lp1-c, and M1) of iSHELL-the new near-IR high-resolution immersion echelle spectrograph at NASA/IRTF (Maunakea, Hawaii). We identified 12 molecular species: nine primary volatiles (H2O, HCN, NH3, CO, C2H2, C2H6, CH4, CH3OH, H2CO) and three product species (CN, NH2, OH). We detected 85 H2O emission lines from 12 water vibrational bands across L1-c and M1 settings. The many detected water emission lines enabled retrieval of accurate measures for ortho- and para-H2O independently, thereby reducing systematic uncertainty in the derived ortho-para ratio and nuclear spin temperature. Excitation analyses and emission profile analyses were performed for all species, and molecular abundance ratios relative to water are compared with values found for other Oort Cloud comets in our infrared database. Abundance ratios are consistent for most species, with the exception of underabundant methanol and overabundant ammonia in E4.

Faggi, S.↗

Mars InSight Entry, Descent, and Landing Trajectory and Atmosphere Reconstruction

The InSight mission landed on the surface of Mars on November 26th, 2018. The InSight system performance met all design requirements, although several performance metrics fell near the boundaries of the predictions. The peak deceleration was high, the overall timeline was short, and the landing site was uprange and crossrange from the target. This paper describes the reconstruction of the entry, descent, and landing trajectory and atmosphere. The approach utilizes a Kalman filter to blend sensor data to obtain the vehicle trajectory. The aerodynamic database is used in combination with the sensed accelerations to obtain estimates of the atmosphere-relative state, which in turn is used to derive the free-stream atmospheric conditions during entry, until the time of parachute deployment. The results indicate that the reconstructed atmosphere was approximately 1σbelow the preflight atmosphere. Analysis of the reconstructed vehicle attitude angles indicate that the aerodynamic lift was oriented downward at entry. The vehicle developed a roll rate during entry, which directed a component of the lift to the north. The low density and aerodynamic lift direction are determined to be the primary causes of the high deceleration, short timeline, and location of the landing site relative to the target.

Christopher D Karlgaard↗

Mars InSight Entry, Descent, and Landing Trajectory and Atmosphere Reconstruction

The InSight mission landed on the surface of Mars on November 26th, 2018. The InSight system performance met all design requirements, although several performance metrics fell near the boundaries of the predictions. The peak deceleration was high, the overall timeline was short, and the landing site was uprange and crossrange from the target. This paper describes the reconstruction of the entry, descent, and landing trajectory and atmosphere. The approach utilizes a Kalman filter to blend sensor data to obtain the vehicle trajectory. The aerodynamic database is used in combination with the sensed accelerations to obtain estimates of the atmosphere-relative state, which in turn is used to derive the free-stream atmospheric conditions during entry, until the time of parachute deployment. The results indicate that the reconstructed atmosphere was approximately 1σbelow the preflight atmosphere. Analysis of the reconstructed vehicle attitude angles indicate that the aerodynamic lift was oriented downward at entry. The vehicle developed a roll rate during entry, which directed a component of the lift to the north. The low density and aerodynamic lift direction are determined to be the primary causes of the high deceleration, short timeline, and location of the landing site relative to the target.

Christopher D Karlgaard↗

TPSAS-NF1676L-33626-DND

NASA is conducting a series of computational experiments to quantify atmospheric effects on low noise sonic booms. In the current study, simulated cruise nearfield pressure data from NASA?s X-59 Quiet Supersonic Technology aircraft was propagated from the aircraft to the ground at four cardinal headings through five years of realistic atmospheric profiles at 30 locations across the eastern USA. Statistical design of experiments was used to select the locations where primary sonic thump carpet widths (CW) and metric levels at the ground were computed. Atmospheric profiles were taken from the Climate Forecast System Reanalysis database, which contains reanalyzed atmospheric profiles four times daily. Decision tree analyses were performed to determine relative importance of predictors for CW and metric levels. Predictors included were latitude, longitude, date, time of day, season, climate, aircraft heading, and ground elevation. Results of this study indicate the propagation resolution needed to adequately characterize the distributions of CW and ground metric data, i.e., necessary separation distance between propagation locations and total number of atmospheres through which to propagate. This resolution will be used for a follow-on study of simulated X-59 carpets across the entire US mainland.

Will Doebler↗

The Volatile Composition of Comet C/2017 E4 (Lovejoy) Before Its Disruption, as Revealed by High-Resolution Infrared Spectroscopy with iSHELL at the NASA-IRTF

In April 2017, we acquired comprehensive high-resolution spectra of newly-discovered comet C/2017 E4 (Lovejoy) as it approached perihelion, and before its disintegration. We detected many cometary emission lines in the (2.8–5.3)μm range, in four customized instrument settings (L1-c, L3, Lp1-cand M1) of iSHELL -the new near-IR high resolution immersion echelle spectrograph at NASA/IRTF (Maunakea, Hawaii). We identified twelve molecular species; nine primary volatiles (H2O, HCN, NH3, CO, C2H2, C2H6, CH4, CH3OH, H2CO) and three product species (CN, NH2,OH). We detected 85H2O emission lines from 12 water vibrational bands across L1-c and M1 settings. The many detected water emission lines enabled retrieval of accurate measures for ortho-and para-H2O independently, thereby reducing systematic uncertainty in the derived ortho-para ratio and nuclear spin temperature. Excitation analyses and emission profile analyses were performed for all species, and molecular abundance ratios relative to water are compared with values found for other Oort Cloud comets in our infrared database. Abundance ratios are consistent for most species, with the exception of under-abundant methanol and over-abundant ammonia in E4.

S. Faggi↗

New insight into the global record of the Ediacaran tubular morphotype: a common solution to early multicellularity

The tubular morphogroup is a common component of Earth’s first complex, multicellular communities—the Ediacaran biota—and offers valuable insight into biological traits that are fundamental to animal life because they have intriguing links to metazoan phyla and are highly abundant in Ediacaran ecosystems. Biomineral tubes (e.g. Cloudina) are well described from the Nama assemblage (~550–538 Myr), yielding a relatively detailed understanding of this subset of the morphogroup. Conversely, the non-biomineral tubular taxa of the Nama assemblage, as well as of the older White Sea assemblage (~560–550 Myr), are poorly understood. As a result, the variability of characters that define non-biomineral tubular organisms is unknown and their diversity dynamics throughout the terminal Ediacaran are unconstrained. To test hypotheses related to the diversity, morphological variability and temporal distribution of non-biomineral tubes, a comprehensive database of non-biomineral Ediacaran tubular taxa was compiled. Results demonstrate previously unrecognized morphological disparity in the non-biomineral tubular morphogroup and reveal that it comprises a higher number of genera than all other non-tubular morphogroups in the White Sea and the Nama. Thus, it illustrates that a tubular form dominated Ediacaran ecosystems for considerably longer than previously appreciated and, importantly, was the most common solution to early multicellularity.

Rachel L. Surprenant↗

Neutron Source Facility Training Simulator Based on EPICS

A plant operator training simulator is developed for training the plant operators as well as for design verification of plant control system (PCS) and plant protection system (PPS) for the Kharkov Institute of Physics and Technology Neutron Source Facility. The simulator provides the operator interface for the whole plant including the sub-critical assembly coolant loop, target coolant loop, secondary coolant loop, and other facility systems. The operator interface is implemented based on Experimental Physics and Industrial Control System (EPICS), which is a comprehensive software development platform for distributed control systems. Since its development at Argonne National Laboratory, it has been widely adopted in the experimental physics community, e.g. for control of accelerator facilities. This work is the first implementation for a nuclear facility. The main parts of the operator interface are the plant control panel and plant protection panel. The development involved implementation of process variable database, sequence logic, and graphical user interface (GUI) for the PCS and PPS utilizing EPICS and related software tools, e.g. sequencer for sequence logic, and control system studio (CSS-BOY) for graphical use interface. For functional verification of the PCS and PPS, a plant model is interfaced, which is a physics-based model of the facility coolant loops implemented as a numerical computer code. The training simulator is tested and demonstrated its effectiveness in various plant operation sequences, e.g. start-up, shut-down, maintenance, and refueling. It was also tested for verification of the plant protection system under various trip conditions.

Park, Young Soo↗

Carbon Storage Site Mapping Inquiry Tool (MapIT)

To date, 48 projects, consisting of 139 wells, are currently under review with the Environmental Protection Agency’s (EPA) Underground Injection Control (UIC) Program for Class VI – wells used for geologic sequestration of carbon dioxide. The number of applications submitted is expected to increase in coming years with the increase of the 45Q tax credit available to projects that initiate construction prior to 2033. The amount of data collected to submit a Class VI permit is vast, and often disparate, coming from state, federal, and commercial entities, as well as field-specific data collected within an area of interest. When preparing for site selection and permitting, the initial aggregation of relevant public data can be time intensive. The Carbon Storage Site Mapping Inquiry tool (MapIT) was created to support and accelerate the discovery and accessibility of open-source data and information available across the USA. Data was aggregated and organized based on data types described within the EPA UIC Class VI permit documentation. The online tool enables users to explore hundreds of geospatial data layers and connect to additional external resources, leveraging API and REST services where possible to ensure updates to data in real time. MapIT enables users to explore state and federal data related to geologic, geophysical, structural, hydrologic, and contextual information. In addition to displaying spatial data and linking to external resources, MapIT leverages custom widgets to ensure that internal data and external data are discoverable and accessible. The widgets connect users to resources such as the USGS publications and the USGS Earthquake Catalog based on a user-defined location. This talk will describe data aggregation workflows, data types, data preparation, and tool development for MapIT. The Carbon Storage Site Mapping Inquiry Tool and underlying database are valuable, intuitive resources that empower government, academic, commercial and industry stakeholders to explore, analyze, and acquire carbon storage related data.

Morkner, Paige↗

A Composition-Based Approach for Predicting Hanford Tank Waste Liquid Viscosity

Liquid viscosity is an important Hanford waste physical property that governs, in part, the performance of key Hanford flowsheet unit operations and processes, including waste filtration, ion exchange, pumping and transport, and mixing. Evaluation and optimization of these processes rely on liquid viscosity correlations subject to substantial error (at least ±60%) that can lead to overly conservative, and sometimes physically unachievable, limits for validation and operation of these unit operations. The current liquid viscosity correlations used for the Hanford flowsheet attempt to capture the effects of specific waste chemistry (namely, the speciation of various salts) on liquid viscosity using liquid density alone. It is postulated that the ±60% or greater error associated with these “density-based” liquid viscosity predictions is driven in part by the inability of waste density to capture the full impact of waste chemistry on liquid viscosity, and that improved prediction accuracy could be achieved by implementing a composition-based approach to evaluating liquid viscosity for Hanford wastes. Recent publications, namely those of Lencka et al. (1998), Hu (2004), and Laliberté (2007a), provide correlations and comprehensive, consolidated databases of single-salt solution viscosity that enable composition-based predictions for Hanford-type liquids (i.e., concentrated multi-component aqueous electrolyte solutions). In the current study, the viscosities of Hanford wastes and waste simulants were predicted using a composition-based model developed by Laliberté (2007a) (hereafter referred to as the “Laliberté viscosity model”) to evaluate its accuracy relative to the current density-based models used to predict waste viscosity for engineering applications at the Hanford Site. A viscosity database that captured the composition and viscosity of wastes and waste simulants was developed to support this evaluation. To facilitate application of the Laliberté viscosity model, waste and waste simulant compositions were converted to an equivalent salt recipe composed of salts with known viscosity coefficients using a number of simplifying assumptions that have the potential to impact the fidelity of the model prediction. Despite these simplifications, the Laliberté viscosity model was able to predict viscosity more accurately than the density-based correlations currently available for Hanford flowsheet use, such as that proposed in RPP-RPT- 51652. The use of composition-based viscosity models, like that proposed by Laliberté (2007a), shows promise for leading to improved prediction of liquid waste viscosity. As implemented in this study, application of the Laliberté viscosity model could lead to a decrease in the uncertainty associated with liquid viscosity prediction by as much as a factor of two, allowing for reduction in unit operation design conservatism and for the more realistic selection of test simulants for flowsheet process evaluation and optimization, all of which could potentially reduce flowsheet design margins, lower costs and reduce duration of the Hanford mission, and reduce Hanford flowsheet risks.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗