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NASA NTRS1985

Neutral parcel transport in the high latitude F-region

The NCAR Thermospheric General Circulation model (TGCM) is used together with a 'post-processor' diagnostic package to analyze neutral parcel transport in the high latitude F-region. The diagnostic package includes a feature that enables individual parcels of neutral gas to be tracked by interpolation through the TGCM model grid in time and space. Various trajectories have been calculated to illustrate the predicted loci of neutral gas parcels that encounter large ion-drag forces due to the ionospheric mapping of the magnetospheric convection electric field. The trajectories, calculated for a 'steady state', diurnally reproducible run of the TGCM, show that the cusp region plays an exceedingly important regulatory or nozzle role for the overall flow pattern and has great influence on the energization of the F-region polar cap. In particular, it is found that the trajectory of a 'typical' F-region neutral gas parcel passes through the cusp region at least once and sometimes twice in a 24 hour period due to the convergent geometry of the ion convection pattern.

Killeen, T. L.↗
NASA NTRS1987

Fifty Year Canon of Solar Eclipses: 1986 - 2035

A complete catalog is presented, listing the general characteristics of every solar eclipse from 1901 through 2100. To complement this catalog, a detailed set of cylindrical projection world maps shows the umbral paths of every solar eclipse over the 200 year interval. Focusing in on the next 50 years, accurate geodetic path coordinates and local circumstances for the 71 central eclipses from 1987 through 2035 are tabulated. Finally, the geodetic paths of the umbral and penumbral shadows of all 109 solar eclipses in this period are plotted on orthographic projection maps of the Earth. Appendices are included which discuss eclipse geometry, eclipse frequency and occurrence, modern eclipse prediction and time determination. Finally, code for a simple Fortran program is given to predict the occurrence and characteristics of solar eclipses.

Espenak, Fred↗
NASA NTRS1994

Synthetic vision display evaluation studies

The goal of this research was to help us understand the display requirements for a synthetic vision system for the High Speed Civil Transport (HSCT). Four experiments were conducted to examine the effects of different levels of perceptual cue complexity in displays used by pilots in a flare and landing task. Increased levels of texture mapping of terrain and runway produced mixed results, including harder but shorter landings and a lower flare initiation altitude. Under higher workload conditions, increased texture resulted in an improvement in performance. An increase in familiar size cues did not result in improved performance. Only a small difference was found between displays using two patterns of high resolution texture mapping. The effects of increased perceptual cue complexity on performance was not as strong as would be predicted from the pilot's subjective reports or from related literature. A description of the role of a synthetic vision system in the High Speed Civil Transport is provide along with a literature review covering applied research related to perceptual cue usage in aircraft displays.

Regal, David M.↗
NASA NTRS2002

Variability of Winter Air Temperature in Mid-Latitude Europe

The aim of this paper is to report extreme winter/early-spring air temperature (hereinafter temperature) anomalies in mid-latitude Europe, and to discuss the underlying forcing to these interannual fluctuations. Warm advection from the North Atlantic in late winter controls the surface-air temperature, as indicated by the substantial correlation between the speed of the surface southwesterlies over the eastern North Atlantic (quantified by a specific Index Ina) and the 2-meter level air temperatures (hereinafter Ts) over Europe, 45-60 deg N, in winter. In mid-March and subsequently, the correlation drops drastically (quite often it is negative). This change in the relationship between Ts and Ina marks a transition in the control of the surface-air temperature: absorption of insolation replaces the warm advection as the dominant control. This forcing by maritime-air advection in winter was demonstrated in a previous publication, and is re-examined here in conjunction with extreme fluctuations of temperatures in Europe. We analyze here the interannual variability at its extreme by comparing warm-winter/early-spring of 1989/90 with the opposite scenario in 1995/96. For these two December-to-March periods the differences in the monthly mean temperature in Warsaw and Torun, Poland, range above 10 C. Short-term (shorter than a month) fluctuations of the temperature are likewise very strong. We conduct pentad-by-pentad analysis of the surface-maximum air temperature (hereinafter Tmax), in a selected location, examining the dependence on Ina. The increased cloudiness and higher amounts of total precipitable water, corollary effects to the warm low-level advection. in the 1989/90 winter, enhance the positive temperature anomalies. The analysis of the ocean surface winds is based on the Special Sensor Microwave/Imager (SSM/I) dataset; ascent rates, and over land wind data are from the European Centre for Medium-Range Weather Forecasts (ECMWF); maps of 2-m temperature, cloud cover and precipitable water are from the National Centers for Environmental Prediction (NCEP) Reanalysis.

Otterman, J.↗
NASA NTRS2007

Photogrammetric Metrology for the James Webb Space Telescope Integrated Science Instrument Module

The James Webb Space Telescope (JWST) is a 6.6m diameter, segmented, deployable telescope for cryogenic IR space astronomy (approximately 40K). The JWST Observatory architecture includes the Optical Telescope Element and the Integrated Science Instrument Module (ISIM) element that contains four science instruments (SI) including a Guider. The ISM optical metering structure is a roughly 2.2x1.7x2.2m, asymmetric frame that is composed of carbon fiber and resin tubes bonded to invar end fittings and composite gussets and clips. The structure supports the SIs, isolates the SIs from the OTE, and supports thermal and electrical subsystems. The structure is attached to the OTE structure via strut-like kinematic mounts. The ISIM structure must meet its requirements at the approximately 40K cryogenic operating temperature. The SIs are aligned to the structure's coordinate system under ambient, clean room conditions using laser tracker and theodolite metrology. The ISIM structure is thermally cycled for stress relief and in order to measure temperature-induced mechanical, structural changes. These ambient-to-cryogenic changes in the alignment of SI and OTE-related interfaces are an important component in the JWST Observatory alignment plan and must be verified. We report on the planning for and preliminary testing of a cryogenic metrology system for ISIM based on photogrammetry. Photogrammetry is the measurement of the location of custom targets via triangulation using images obtained at a suite of digital camera locations and orientations. We describe metrology system requirements, plans, and ambient photogrammetric measurements of a mock-up of the ISIM structure to design targeting and obtain resolution estimates. We compare these measurements with those taken from a well known ambient metrology system, namely, the Leica laser tracker system. We also describe the data reduction algorithm planned to interpret cryogenic data from the Flight structure. Photogrammetry was selected from an informal trade study of cryogenic metrology systems because its resolution meets sub-allocations to ISIM alignment requirements and it is a non-contact method that can in principle measure six degrees of freedom changes in target location. In addition, photogrammetry targets can be readily related to targets used for ambient surveys of the structure. By thermally isolating the photogrammetry camera during testing, metrology can be performed in situ during thermal cycling. Photogrammetry also has a small but significant cryogenic heritage in astronomical instrumentation metrology. It was used to validate the displacement/deformation predictions of the reflectors and the feed horns during thermal/vacuum testing (90K) for the Microwave Anisotropy Probe (MAP). It also was used during thermal vacuum testing (100K) to verify shape and component alignment at operational temperature of the High Gain Antenna for New Horizons. With tighter alignment requirements and lower operating temperatures than the aforementioned observatories, ISIM presents new challenges in the development of this metrology system.

Nowak, Maria↗
NASA NTRS2011

NASA Tech Briefs, January 2011

The topics include: 1) Distributed Aerodynamic Sensing and Processing Toolbox; 2) Collaborative Supervised Learning for Sensor Networks; 3) Hazard Detection Software for Lunar Landing; 4) Onboard Nonlinear Engine Sensor and Component Fault Diagnosis and Isolation Scheme; 5) Network-Capable Application Process and Wireless Intelligent Sensors for ISHM; 6) Interface Supports Multiple Broadcast Transceivers for Flight Applications; 7) FPGA Sequencer for Radar Altimeter Applications; 8) Miniature Sapphire Acoustic Resonator - MSAR; 9) Process-Hardened, Multi-Analyte Sensor for Characterizing Rocket Plume Constituents; 10) SAD5 Stereo Correlation Line-Striping in an FPGA; 11) Hybrid Composite Cryogenic Tank Structure; 12) Nanoscale Deformable Optics; 13) Reliability-Based Design Optimization of a Composite Airframe Component; 14) Zinc Oxide Nanowire Interphase for Enhanced Lightweight Polymer Fiber Composites; 15) Plasma Igniter for Reliable Ignition of Combustion in Rocket Engines; 16) Wire Test Grip Fixture; 17) A Sub-Hertz, Low-Frequency Vibration Isolation Platform; 18) Carbon Nanofibers Synthesized on Selective Substrates for Nonvolatile Memory and 3D Electronics; 19) Nanoparticle/Polymer Nanocomposite Bond Coat or Coating; 20) High-Resolution Wind Measurements for Offshore Wind Energy Development; 21) Spring Tire; 22) Marsviewer 2008; 23) Mission Services Evolution Center Message Bus; 24) Major Constituents Analysis for the Vehicle Cabin Atmosphere Monitor; 25) Astronaut Health Participant Summary Application; 26) Adaption of the AMDIS Method to Flight Status on the VCAM Instrument; 27) Natural Language Interface for Safety Certification of Safety-Critical Software; 28) Cryogenic Caging for Science Instrumentation; 29) Wide-Range Neutron Detector for Space Nuclear Applications; 30) In Situ Guided Wave Structural Health Monitoring System; 31) Multiplexed Energy Coupler for Rotating Equipment; 32) Attitude Estimation in Fractionated Spacecraft Cluster Systems; 33) Full Piezoelectric Multilayer-Stacked Hybrid Actuation/Transduction Systems; 34) Active Flow Effectors for Noise and Separation Control; 35) Method and System for Temporal Filtering in Video Compression Systems; 36) Apparatus for Measuring Total Emissivity of Small, Low-Emissivity Samples; 37) Multiple-Zone Diffractive Optic Element for Laser Ranging Applications; 38) Simplified Architecture for Precise Aiming of a Deep-Space Communication Laser Transceiver; 39) Two-Photon-Absorption Scheme for Optical Beam Tracking; 40) High-Sensitivity, Broad-Range Vacuum Gauge Using Nanotubes for Micromachined Cavities; 41) Wide-Field Optic for Autonomous Acquisition of Laser Link; 42) Extracting Zero-Gravity Surface Figure of a Mirror; 43) Modeling Electromagnetic Scattering From Complex Inhomogeneous Objects; 44) Visual Object Recognition and Tracking of Tools; 45) Method for Implementing Optical Phase Adjustment; 46) Visual SLAM Using Variance Grid Maps; 47) Rapid Calculation of Spacecraft Trajectories Using Efficient Taylor Series Integration; 48) Efficient Kriging Algorithms; 49) Predicting Spacecraft Trajectories by the WeavEncke Method; 50) An Augmentation of G-Guidance Algorithms; 51) Comparison of Aircraft Icing Growth Assessment Software; 52) Silicon-Germanium Voltage-Controlled Oscillator at 105 GHz; 53) Estimation of Coriolis Force and Torque Acting on Ares-1; 54) Null Lens Assembly for X-Ray Mirror Segments; and 55) High-Precision Pulse Generator.

Source record↗
NASA NTRS2012

Using Total Lightning Observations to Enhance Lightning Safety

Lightning is often the underrated threat faced by the public when it comes to dangerous weather phenomena. Typically, larger scale events such as floods, hurricanes, and tornadoes receive the vast majority of attention by both the general population and the media. This comes from the fact that these phenomena are large, longer lasting, can impact a large swath of society at one time, and are dangerous events. The threat of lightning is far more isolated on a case by case basis, although millions of cloud-to-ground lightning strikes hit this United States each year. While attention is given to larger meteorological events, lightning is the second leading cause of weather related deaths in the United States. This information raises the question of what steps can be taken to improve lightning safety. Already, the meteorological community s understanding of lightning has increased over the last 20 years. Lightning safety is now better addressed with the National Weather Service s access to the National Lightning Detection Network data and enhanced wording in their severe weather warnings. Also, local groups and organizations are working to improve public awareness of lightning safety with easy phrases to remember, such as "When Thunder Roars, Go Indoors." The impacts can be seen in the greater array of contingency plans, from airports to sports stadiums, addressing the threat of lightning. Improvements can still be made and newer technologies may offer new tools as we look towards the future. One of these tools is a network of sensors called a lightning mapping array (LMA). Several of these networks exist across the United States. NASA s Short-term Prediction Research and Transition Center (SPoRT), part of the Marshall Spaceflight Center, has access to three of these networks from Huntsville, Alabama, the Kennedy Space Center, and Washington D.C. The SPoRT program s mission is to help transition unique products and observations into the operational forecast environment. SPoRT has been collaborating with the Huntsville National Weather Service (NWS) Office since 2003 and has since included several other offices to better implement LMA observations into real-time applications. Much of that work has focused on the LMA s ability to detect intra-cloud lightning in addition to cloud-to-ground lightning strikes. Combined, these observations are called total lightning. With total lightning observations, NWS offices can enhance their situational awareness and improve severe weather warnings. Just as importantly, the observed intra-cloud flashes often precede the first cloud-to-ground strike by a few minutes. SPoRT and its partner NWS offices are working to develop visualizations and applications to better utilize these data. However, there is a drawback. The LMAs have a short range of no more than 200 km. This is being addressed with the next generation geostationary satellite, GOES-R, which will boast the Geostationary Lightning Mapper (GLM). SPoRT, in conjunction with NOAA s GOES-R Proving Ground, is working to prepare the end user community for the GLM era using the LMA observations as a demonstration tool. Working collaboratively with our NWS partners, SPoRT is working to determine how best to integrate these future observations to improve both severe storm warnings and lightning safety.

Stano, Geoffrey T.↗
NASA NTRSDate not supplied

Calculating the Height of Volcanic Cloud SO2 With a Lagrangian Trajectory Tool: Raikoke (2019) and Pinatubo (1991) Cases

We have developed a new data analysis tool to reconstruct the altitude of SO2 clouds ejected by avolcanic eruption. Starting with 2D fields of satellite observed SO2 column density, known volcanolocation, and reanalysis wind fields, the Goddard Lagrangian trajectory tool allows us to estimatethe altitude and local concentration of SO2 at the time of observation. We demonstrate this tool forthe June 21, 2019 Mt. Raikoke eruption (8h, 30h and 78 hours after eruption). We use SO2 data fromthe Ozone Mapping and Profiler Suite/Nadir Mapper (OMPS/NM) onboard the NASA-NOAASuomi National Polar Partnership satellite and the Tropospheric Monitoring Instrument(TROPOMI) onboard the European Copernicus Sentinel 5 precursor satellite and wind fields fromthe NASA Goddard Earth Observing System (GEOS) model. We obtained a wide distribution ofSO2 altitudes between 1 and 19 kilometers in different parts of the Raikoke SO2 clouds, with thehighest SO2 concentration between 11 and 16 km, in good agreement with data from independentSO2 layer height retrievals from TROPOMI and Infrared Atmospheric Sounding Interferometer(IASI). We then applied this method to the June 15, 1991 Mt. Pinatubo eruption using SO2 columnmeasurements from the NASA Total Ozone Mapping Spectrometer (TOMS) on June 16, 17, 18 andusing wind fields from the National Centers for Environmental Prediction Reanalysis version 2. Weobtained a wide distribution of SO2 heights from 6 km up to 30 km in the northern part of the cloud.We use our new trajectory tool to reconstruct volcanic SO2/aerosol emission sources as functions oftime and altitude, providing inputs to the GEOS model aerosol and chemistry schemes in order tosimulate the dispersion of volcanic SO2 and aerosol clouds from these events.

SO2↗
NASA NTRSDate not supplied

Helioseismic Measurements of Convective Power in Solar Cycle 24

Constraining the parameters under which convection in the solar interior operates has important implications for describing how energy is transported by plasma motions, and various physical models have been employed to provide some theoretical estimates on the expected power spectrum. Past attempts to measure the convective power distributed among large spatial scales have, however, found differing and incompatible values. Here, we present measurements of the convective power spectrum in the upper convection zone for Carrington rotations in Solar Cycle 24 obtained from the helioseismic signal corresponding to East-West flows. We also perform calibration on synthetic data using the global acoustic GALE code to make assessments of the flow velocities at various length scales without the need for performing inversions. This allows us to derive the convective power spectrum from the flow maps and to compare with the results from the raw travel times. These results are compared against predictions of convective power in global models of convection produced by the EULAG code. Finally, we show how the steps in our analysis procedure (for example data segmentation, filtering, etc.) affect our estimates of the convective power by comparing with the synthetic data from the GALE code.

Heliophysics↗
DOE OSTI2023

Targeting tissues via dynamic human systems modeling in generative design

Drug discovery is a complex, costly process with high failure rates. A successful drug should bind to a target, be deliverable to an intended site of activity, and promote a desired pharmacological effect without causing toxicity. Typically, these factors are evaluated in series over the course of a pipeline where the number of candidates is sequentially whittled down from a very large initial pool. One promise of AI-driven discovery is the opportunity to evaluate multiple facets of drug performance in parallel. However, despite ML-driven advancements, current models for pharmacological property prediction are exclusively trained to predict molecular properties, ignoring important, dynamic biodistribution and bioactivity effects. Here, we present our progress towards incorporating quantitative systems physiology models into an AI-enabled drug design and molecular generation pipeline. Within a genetic algorithm, we include human-relevant physiologically based pharmacokinetic (PBPK) models. These PBPK models leverage properties that are predicted by a fine-tuned molecular language model. Together, these models will aid in capturing the mapping between molecules and therapeutic outcomes that is necessary to accelerate the drug discovery process.

Fox, Zach↗
DOE OSTI2022

Deep learning-accelerated 3D carbon storage reservoir pressure forecasting based on data assimilation using surface displacement from InSAR

Fast forecasting of the reservoir pressure distribution during geologic carbon storage (GCS) by assimilating monitoring data is a challenging problem. Due to high drilling cost, GCS projects usually have spatially sparse measurements from few wells, leading to high uncertainties in reservoir pressure prediction. To address this challenge, we use low-cost Interferometric Synthetic-Aperture Radar (InSAR) data as monitoring data to infer reservoir pressure build up. We develop a deep learning-accelerated workflow to assimilate surface displacement maps interpreted from InSAR and to forecast dynamic reservoir pressure. Employing an Ensemble Smoother Multiple Data Assimilation (ES-MDA) framework, the workflow updates three-dimensional (3D) geologic properties and predicts reservoir pressure with quantified uncertainties. We use a synthetic commercial-scale GCS model with bimodally distributed permeability and porosity to demonstrate the efficacy of the workflow. A two-step CNN-PCA approach is employed to parameterize the bimodal fields. The computational efficiency of the workflow is boosted by two residual U-Net based surrogate models for surface displacement and reservoir pressure predictions, respectively. The workflow can complete data assimilation and reservoir pressure forecasting in half an hour on a personal computer.

25 ENERGY STORAGE↗
DOE OSTI2025

Cosmology from Planck CMB lensing and DESI DR1 quasar tomography

We present a measurement of the amplitude of matter fluctuations over the redshift range 0.8 ≤ z ≤ 3.5 from the cross correlation of over 1.2 million spectroscopic quasars selected by the Dark Energy Spectroscopic Instrument (DESI) across 7,200 deg 2 (∼ 170 quasars/deg 2 ) and Planck PR4 (NPIPE) cosmic microwave background (CMB) lensing maps. We perform a tomographic measurement in three bins centered at effective redshiftsz=1.44, 2.27 and 2.75, which have ample overlap with the CMB lensing kernel. From a joint fit using the angular clustering of all three redshift bins (auto and cross-spectra), and including an Q m prior from DESI DR1 baryon acoustic oscillations to break the $Ω_{m}-σ_{8}$ degeneracy, we constrain the amplitude of matter fluctuations in the matter-dominated regime to be $σ_{8}=0.929^{+0.059}_{-0.074}$ and $S_{8}≡σ_{8}(Ω_m/0.3)^{0.5} = 0.922^{+0.059}_{-0.073}$. We provide a growth of structure measurement with the largest spectroscopic quasar sample to date at high redshift, which is ∼ 1.5σ higher than predictions from ΛCDM fits to measurements of the primary CMB from Planck PR4. The cross-correlation between PR4 lensing maps and DESI DR1 quasars is detected with a signal-to-noise ratio of 21.7 and the quasar auto-correlation at 27.2 for the joint analysis of all redshift bins. We combine our measurement with the CMB lensing auto-spectrum from the ground-based Atacama Cosmology Telescope (ACT DR6) and Planck PR4 to perform a sound-horizon-free measurement of the Hubble constant, yielding $H_{0}=69.1^{+2.2}_{-2.6} {\rm \ km\ s}^{-1}{\rm Mpc}^{-1}$ through its sensitivity to the matter-radiation equality scale.

baryon acoustic oscillations↗
NASA NTRS2011

Development of the Sasquatch Drop Test Footprint Tool

The Crew Exploration Vehicle Parachute Assembly System (CPAS) is the parachute system for NASA s Orion spacecraft. CPAS is currently in the design and testing phase of development. The test program consists of numerous drop tests, wherein a test article rigged with parachutes is extracted or released from an aircraft. During such tests, range safety is paramount, as is the recoverability of the parachutes and test article. It is crucial to establish an aircraft release point that will ensure that the article and all items released from it will land in safe locations. Early in the CPAS project, a legacy tool (previously used on the X-38 project) was used to determine a safe release point and to predict the landing locations (the footprint) of the payload and all released objects. Due to increasing test complexity and the need for a more flexible tool, a new footprint predictor tool, called Sasquatch, was created in MATLAB. This tool takes in a simulated trajectory for the test article, information about all released objects, and atmospheric wind data (simulated or actual) to calculate the trajectories of the released objects. Dispersions are applied to the landing locations of those objects, taking into account the variability of winds, aircraft release point, and object descent rate. A safe aircraft release point is determined based on the landing locations of the payload and released objects. The release point, landing locations, and dispersions are plotted on a simple map of the drop zone for easy reference. To date, Sasquatch has been used for thirteen drop tests. Comparing the predictions with actual test results has allowed for significant improvements in the tool s predictive capabilities, especially the incorporation of a well-correlated horizontal throw model. Intended future improvements to the tool include tighter dispersions on the landing locations, Monte Carlo capability, direct input from trajectory simulations, and a graphical user interface.

Bledsoe, Kristin J.↗
NASA NTRS1992

Optimization and analysis of large chemical kinetic mechanisms using the solution mapping method - Combustion of methane

A method of systematic optimization, solution mapping, as applied to a large-scale dynamic model is presented. The basis of the technique is parameterization of model responses in terms of model parameters by simple algebraic expressions. These expressions are obtained by computer experiments arranged in a factorial design. The developed parameterized responses are then used in a joint multiparameter multidata-set optimization. A brief review of the mathematical background of the technique is given. The concept of active parameters is discussed. The technique is applied to determine an optimum set of parameters for a methane combustion mechanism. Five independent responses - comprising ignition delay times, pre-ignition methyl radical concentration profiles, and laminar premixed flame velocities - were optimized with respect to thirteen reaction rate parameters. The numerical predictions of the optimized model are compared to those computed with several recent literature mechanisms. The utility of the solution mapping technique in situations where the optimum is not unique is also demonstrated.

Frenklach, Michael↗
NASA NTRS2004

Time Changes of the European Gravity Field from GRACE: A Comparison with Ground Measurements from Superconducting Gravimeters and with Hydrology Model Predictions

We investigate the time-variable gravity changes in Europe retrieved from the initial GRACE monthly solutions spanning a 18 month duration from April 2002 to October 2003. Gravity anomaly maps are retrieved in Central Europe from the monthly satellite solutions we compare the fields according to various truncation levels (typically between degree 10 and 20) of the initial fields (expressed in spherical harmonics to degree 120). For these different degrees, an empirical orthogonal function (EOF) decomposition of the time-variable gravity field leads us to its main spatial and temporal characteristics. We show that the dominant signal is found to be annual with an amplitude and a phase both in agreement with predictions in Europe modeled using snow and soil-moisture variations from recent hydrology models. We compare these GRACE gravity field changes to surface gravity observations from 6 superconducting gravimeters of the GGP (Global Geodynamics Project) European sub-network, with a special attention to loading corrections. Initial results suggest that all 3 data sets (GRACE, hydrology and GGP) are responding to annual changes in near-surface water in Europe of a few microGal (at length scales of approx.1000 km) that show a high value in winter and a summer minimum. We also point out that the GRACE gravity field evolution seems to indicate that there is a trend in gravity between summer 2002 and summer 2003 which can be related to the 2003 heatwave in Europe and its hydrological consequences (drought). Despite the limited time span of our analysis and the uncertainties in retrieving a regional solution from the network of gravimeters, the calibration and validation aspects of the GRACE data processing based on the annual hydrology cycle in Europe are in progress.

Hinderer, J.↗
DOE OSTI2022

RNAseq-based transcriptome assembly of Clostridium acetobutylicum for functional genome annotation and discovery

Accurate genome annotations are essential in modern biology and biotechnology, yet they are still largely based on genome sequencing and comparative analyses. We show that the Clostridium acetobutylicum genome annotation can be markedly improved by integrating bioinformatic predictions with RNA sequencing (RNAseq) data. Samples were acquired under butanol, butyrate, and unstressed treatments across various growth conditions. Analysis of an initial assembly revealed errors due to background signals and limitations of assembly algorithms. Hurdles for RNAseq transcriptome mapping include optimizing library complexity and sequencing depth, yet most studies report low sequencing depth and ignore the effect of ribosomal RNA abundance. An integrative analysis was developed to combine motif predictions, single-nucleotide resolution sequencing depth, and library complexity to resolve difficulties in assembly curation. This minimized false positive error and determined gene boundaries, in some cases, to the exact base-pair of prior studies. This will be the first strand-specific transcriptome assembly in a Clostridium organism.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2021

Stacked CMB lensing and ISW signals around superstructures in the DESI Legacy Survey

The imprints of large-scale structures on the Cosmic Microwave Background (CMB) can be studied via the CMB lensing and Integrated Sachs–Wolfe (ISW) signals. In particular, the stacked ISW signal around supervoids has been claimed in several works to be anomalously high. In this study, we find cluster and void superstructures using four tomographic redshift bins with 0 < z < 0.8 from the DESI Legacy Survey and measure the stacked CMB lensing and ISW signals around them. To compare our measurements with ΛCDM model predictions, we construct a mock catalogue with matched galaxy number density and bias and apply the same photo-z uncertainty as the data. The consistency between the mock and the data is verified via the stacked galaxy density profiles around the superstructures and their quantity. The corresponding lensing convergence and ISW maps are then constructed and compared. The stacked lensing signal agrees with data well except at the highest redshift bin in density peaks, where the mock prediction is significantly higher, by approximately a factor of 1.3. The stacked ISW signal is generally consistent with the mock prediction. We do not obtain a significant signal from voids, A ISW = -0.10 ± 0.69, and the signal from clusters, A ISW = 1.52 ± 0.72, is at best weakly detected. However, these results are strongly inconsistent with previous claims of ISW signals at many times the level of the ΛCDM prediction. We discuss the comparison of our results with past work in this area and investigate possible explanations for this discrepancy.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Prediction of regional infrasound produced by supersonic sources using a ray-based Mach cone source

The geometry of the Mach cone produced by a supersonic source is analyzed and mapped into initial conditions used in acoustic ray tracing. The resulting source model is combined with spherical geometry ray tracing methods to enable propagation simulations for infrasonic signals produced by bolides, space debris, rockets, aircraft, and other fast-than-sound sources out to typical infrasonic observation distances of hundreds or thousands of kilometers. Idealized linear and parabolic trajectories typical of bolides and rockets, respectively, are used to demonstrate the calculation of regional infrasonic signals produced by such sources and characteristics of the radiated infrasonic waves are found to vary strongly with the geometry of the trajectory and atmospheric structure. Predicted regional infrasonic signals are compared with those observed from a November 2020 bolide that passed over Scandinavia using a combination of institutionally maintained infrasound stations and “citizen scientist” data from the Raspberry Shake data repository.

47 OTHER INSTRUMENTATION↗