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At least 811 records · Page 45

PRISMS-PF: A general framework for phase-field modeling with a matrix-free finite element method

Abstract A new phase-field modeling framework with an emphasis on performance, flexibility, and ease of use is presented. Foremost among the strategies employed to fulfill these objectives are the use of a matrix-free finite element method and a modular, application-centric code structure. This approach is implemented in the new open-source PRISMS-PF framework. Its performance is enabled by the combination of a matrix-free variant of the finite element method with adaptive mesh refinement, explicit time integration, and multilevel parallelism. Benchmark testing with a particle growth problem shows PRISMS-PF with adaptive mesh refinement and higher-order elements to be up to 12 times faster than a finite difference code employing a second-order-accurate spatial discretization and first-order-accurate explicit time integration. Furthermore, for a two-dimensional solidification benchmark problem, the performance of PRISMS-PF meets or exceeds that of phase-field frameworks that focus on implicit/semi-implicit time stepping, even though the benchmark problem’s small computational size reduces the scalability advantage of explicit time-integration schemes. PRISMS-PF supports an arbitrary number of coupled governing equations. The code structure simplifies the modification of these governing equations by separating their definition from the implementation of the numerical methods used to solve them. As part of its modular design, the framework includes functionality for nucleation and polycrystalline systems available in any application to further broaden the phenomena that can be used to study. The versatility of this approach is demonstrated with examples from several common types of phase-field simulations, including coarsening subsequent to spinodal decomposition, solidification, precipitation, grain growth, and corrosion.

36 MATERIALS SCIENCE↗

A gradient-based optimization approach for the detection of partially connected surfaces using vibration tests

The integrity of engineering structures is often compromised by embedded surfaces that result from incomplete bonding during the manufacturing process, or initiation of damage from fatigue or impact processes. Examples include delaminations in composite materials, incomplete weld bonds when joining two components, and internal crack planes that may form when a structure is damaged. In many cases the areas of the structure in question may not be easily accessible, thus precluding the direct assessment of structural integrity. In this paper, we present a gradient-based, partial differential equation (PDE)-constrained optimization approach for solving the inverse problem of interface detection in the context of steady-state dynamics. An objective function is defined that represents the difference between the model predictions of structural response at a set of spatial locations, and the experimentally measured responses. One of the contributions of our work is a novel representation of the design variables using a density field that takes values in the range [0, 1] and raised to an integer exponent that promotes solutions to be near the extrema of the range. The density field is combined with the penalty method for enforcing a zero gap condition and realizing partially bonded surfaces. Furthermore the use of the penalty method with a density field representation leads to objective functions that are continuously differentiable with respect to the unknown parameters, enabling the use of efficient gradient-based optimization algorithms. Numerical examples of delaminated plates are presented to demonstrate the feasibility of the approach.

42 ENGINEERING↗

Cutting Tetrahedra by Node Identifiers

This report briefly outlines an algorithm for dividing a tetrahedron intersected by a planar interface into conforming sub-tetrahedra. The problem of conformal decomposition of tetrahedral meshes arises in enriched finite element methods; in particular, we are concerned with the Conformal Decomposition Finite Element Method (CDFEM) and variants of the eXtended Finite Element Method (XFEM). The algorithm presented is based on the paper How to Subdivide Pyramids, Prisms and Hexahedra into Tetrahedra by Dompierre, Labbe, Vallet, and Camarero (1999), and here is applied and extended to the problem of fully defining and tracking all geometric features of the sub-tetrahedra generated when a tetrahedron is cut by a planar surface.

97 MATHEMATICS AND COMPUTING↗

A nonlinear finite-element analysis of wings in steady incompressible flows with wake roll-up

The problem of lifting surfaces and complex aircraft configurations in steady incompressible flow is considered. For lifting surfaces the problem is formulated in terms of an integral equation relating the potential discontinuity on wing and wake to the normal derivative of the potential on the lifting surface. For complex configurations the problem is formulated in terms of an integral equation relating the potential to its normal derivative on the surface of the aircraft. The integral equation is approximated by a system of linear algebraic equations obtained by dividing the surfaces into small quadrilateral elements and by assuming the potential (or the potential discontinuity) and its normal derivative to be constant within each element. The wake geometry is obtained by iteration by satisfying the condition that the velocity be tangent to the surface of the wake and that the potential discontinuity be constant along the streamlines.

Suciu, E. O.↗

A globally convergent matrix-free algorithm for implicit time-marching schemes arising in finite element analysis in fluids

A solution procedure for solving nonlinear time-marching problems is presented. The nonsymmetric systems of equations arising from a Newton-type linearization of these time-marching problems are solved using an iterative strategy based on the generalized minimal residual (GMRES) algorithm. Matrix-free techniques leading to reduction in storage are presented. Incorporation of a linesearch algorithm in the Newton-GMRES scheme is discussed. An automatic time-increment control strategy is developed to increase the stability of the time-marching process. High-speed flow computations demonstrate the effectiveness of these algorithms.

Johan, Zdenek↗

Effects of finite element discretization and model simplification on calculations of ductile failure initiation

The finite element method is a scheme to discretize the infinite number of degrees of freedom in continuum-level problems down to a finite number of degrees of freedom. This discretization is done in conjunction with methods that also reduce the field differential equations to sets of algebraic ones that can be solved by arithmetical operations. Therefore, solutions attained by finite element models are approximations to the exact solutions of the field equations.

97 MATHEMATICS AND COMPUTING↗

Variational approach to probabilistic finite elements

Probabilistic finite element method (PFEM), synthesizing the power of finite element methods with second-moment techniques, are formulated for various classes of problems in structural and solid mechanics. Time-invariant random materials, geometric properties, and loads are incorporated in terms of their fundamental statistics viz. second-moments. Analogous to the discretization of the displacement field in finite element methods, the random fields are also discretized. Preserving the conceptual simplicity, the response moments are calculated with minimal computations. By incorporating certain computational techniques, these methods are shown to be capable of handling large systems with many sources of uncertainties. By construction, these methods are applicable when the scale of randomness is not very large and when the probabilistic density functions have decaying tails. The accuracy and efficiency of these methods, along with their limitations, are demonstrated by various applications. Results obtained are compared with those of Monte Carlo simulation and it is shown that good accuracy can be obtained for both linear and nonlinear problems. The methods are amenable to implementation in deterministic FEM based computer codes.

Belytschko, T.↗

Variational approach to probabilistic finite elements

Probabilistic finite element methods (PFEM), synthesizing the power of finite element methods with second-moment techniques, are formulated for various classes of problems in structural and solid mechanics. Time-invariant random materials, geometric properties and loads are incorporated in terms of their fundamental statistics viz. second-moments. Analogous to the discretization of the displacement field in finite element methods, the random fields are also discretized. Preserving the conceptual simplicity, the response moments are calculated with minimal computations. By incorporating certain computational techniques, these methods are shown to be capable of handling large systems with many sources of uncertainties. By construction, these methods are applicable when the scale of randomness is not very large and when the probabilistic density functions have decaying tails. The accuracy and efficiency of these methods, along with their limitations, are demonstrated by various applications. Results obtained are compared with those of Monte Carlo simulation and it is shown that good accuracy can be obtained for both linear and nonlinear problems. The methods are amenable to implementation in deterministic FEM based computer codes.

Belytschko, T.↗

A Low-Rank Multigrid Method for the Stochastic Steady-State Diffusion Problem

We study a multigrid method for solving large linear systems of equations with tensor product structure here. Such systems are obtained from stochastic finite element discretization of stochastic partial differential equations such as the steady-state diffusion problem with random coefficients. When the variance in the problem is not too large, the solution can be well approximated by a low-rank object. In the proposed multigrid algorithm, the matrix iterates are truncated to low rank to reduce memory requirements and computational effort. The technique is proved convergent with an analytic error bound. Numerical experiments show its effectiveness in solving the Galerkin systems compared to the original multigrid solver, especially when the number of degrees of freedom associated with the spatial discretization is large.

97 MATHEMATICS AND COMPUTING↗

On high-continuity transfinite element formulations for linear-nonlinear transient thermal problems

This paper describes recent developments in the applicability of a hybrid transfinite element methodology with emphasis on high-continuity formulations for linear/nonlinear transient thermal problems. The proposed concepts furnish accurate temperature distributions and temperature gradients making use of a relatively smaller number of degrees of freedom; and the methodology is applicable to linear/nonlinear thermal problems. Characteristic features of the formulations are described in technical detail as the proposed hybrid approach combines the major advantages and modeling features of high-continuity thermal finite elements in conjunction with transform methods and classical Galerkin schemes. Several numerical test problems are evaluated and the results obtained validate the proposed concepts for linear/nonlinear thermal problems.

Tamma, Kumar K.↗

Improving Kinetic Consistency Across Elastic Model Transitions With Quadratic Inequality Constrained Weighted Least Squares (WLSQI)

Flexible body modeling presents a large challenge in the development of simulations to aid in design of flight control systems for launch and landing vehicles. Typically, the flexible body model is not a single continuous model but are rather discrete sets of Linear Time Invariant (LTI) Finite Element Models (FEM) incremented by propellant levels. This introduces the problem of smoothly transitioning modal and physical states of the vehicle when switching from one FEM to the next. This paper introduces a new approach to optimally transition flexible body states with weighted least squares, building off previous methods.

Convex Optimization↗

Dynamical observer for a flexible beam via finite element approximations

The purpose of this view-graph presentation is a computational investigation of the closed-loop output feedback control of a Euler-Bernoulli beam based on finite element approximation. The observer is part of the classical observer plus state feedback control, but it is finite-dimensional. In the theoretical work on the subject it is assumed (and sometimes proved) that increasing the number of finite elements will improve accuracy of the control. In applications, this may be difficult to achieve because of numerical problems. The main difficulty in computing the observer and simulating its work is the presence of high frequency eigenvalues in the finite-element model and poor numerical conditioning of some of the system matrices (e.g. poor observability properties) when the dimension of the approximating system increases. This work dealt with some of these difficulties.

Manitius, Andre↗

Fractional Operators Applied to Geophysical Electromagnetics

A growing body of applied mathematics literature in recent years has focused on the application of fractional calculus to problems of anomalous transport. In these analyses, the anomalous transport (of charge, tracers, fluid, etc.) is presumed attributable to long–range correlations of material properties within an inherently complex, and in some cases self-similar, conducting medium. Rather than considering an exquisitely discretized (and computationally intractable) representation of the medium, the complex and spatially correlated heterogeneity is represented through reformulation of the governing equation for the relevant transport physics such that its coefficients are, instead, smooth but paired with fractional–order space derivatives. Here we apply these concepts to the scalar Helmholtz equation and its use in electromagnetic interrogation of Earth’s interior through the magnetotelluric method. We outline a practical algorithm for solving the Helmholtz equation using spectral methods coupled with finite element discretizations. Execution of this algorithm for the magnetotelluric problem reveals several interesting features observable in field data: long–range correlation of the predicted electromagnetic fields; a power–law relationship between the squared impedance amplitude and squared wavenumber whose slope is a function of the fractional exponent within the governing Helmholtz equation; and, a non–constant apparent resistivity spectrum whose variability arises solely from the fractional exponent. In geologic settings characterized by self–similarity (e.g. fracture systems; thick and richly–textured sedimentary sequences, etc.) we posit that these diagnostics are useful for geologic characterization of features far below the typical resolution limit of electromagnetic methods in geophysics.

58 GEOSCIENCES↗

ECP Milestone Report: Identify initial kernels, bake-off problems (benchmarks) and miniapps (CEED-MS6)

The CEED co-design center is developing a number of kernels, bake-off / benchmark problems (BPs) and mini-applications (miniapps) that capture the unique requirements of high-order finite element algorithms and use them to influence standards, best practices and vendors to generate more portable, better performing code across diverse hardware designs. This is a main activity in CEED’s Hardware, Applications and Finite Element thrusts. CEED’s miniapps, a.k.a. CEEDlings, are small, standalone applications - surrogates for sub-components of interest from the selected first wave of applications (the MARBL/LLNLApp and ExaSMR projects). The BPs are even smaller standalone programs that solve a simple physical problem, including discretization, linear and/or nonlinear solve, and potentially a relatively small number of time steps. A BP may be a proxy/surrogate for part of a miniapp or another problem of general interest. In CEED, both miniapps and BPs will be used extensively in the project to evaluate and compare the performance of algorithms in specific contexts. The parts of the miniapps and BPs that play an important role in their overall performance will be identified and separated as standalone kernels. These kernels and their interaction inside BPs, miniapps and the actual applications, will be the main focus of our optimization efforts. All three standalone pieces of software (miniapps, BPs, and kernels) will serve as a basis for engaging and collaborating with hardware vendors and software technologies (ST) projects. These partners can start at the bottom of the hierarchy, e.g. with the kernels, and easily transition to BPs and miniapps as all three families will be produced in the same CEED environment. In this milestone we identified the initial kernels, bake-off problems and miniapps and delivered software and documentation for them through the new CEED website, http://ceed.exascaleproject.org. We specifically identified the Nekbone miniapp for the ExaSMR application and developed a new miniapp, Laghos, for the MARBL/LLNLApp application. We also formulated four initial benchmark problems (BP1- BP4) with clearly defined performance metrics and performed an initial bake-off comparison between the Nek5000 (spectral element) and MFEM (high-order finite element) technologies. As part of the milestone, we also engaged vendors (AMD) and ST projects (MPICH, STRUMPACK). In this document we are reporting some details and results from these R&D activities, as well as additional project-wide activities performed in Q3 of FY17, including: making CEED software available on GitHub, developing the project website, and the preparation of CEED’s first annual meeting.

97 MATHEMATICS AND COMPUTING↗

BIGHORN Computational Fluid Dynamics Theory, Methodology, and Code Verification & Validation Benchmark Problems

This document presents the theoretical background for a hybrid finite-element / finite-volume fluid flow solver, namely BIGHORN, based on the Multiphysics Object Oriented Simulation Environment (MOOSE) computational framework developed at the Idaho National Laboratory (INL). An overview of the numerical methods used in BIGHORN are discussed and followed by a presentation of the formulation details. The document begins with the governing equations for the compressible fluid flow, with an outline of the requisite constitutive relations. A second-order finite volume method used for solving the compressible fluid flow problems is presented next. A Pressure-Corrected Implicit Continuous-fluid Eulerian (PCICE) formulation for time integration is also presented. The multi-fluid formulation is being developed. Although multi-fluid is not fully-developed, BIGHORN has been designed to handle multi-fluid problems. Due to the flexibility in the underlying MOOSE framework, BIGHORN is quite extensible, and can accommodate both multi-species and multi-phase formulations. This document also presents a suite of verification & validation benchmark test problems for BIGHORN. The intent for this suite of problems is to provide baseline comparison data that demonstrates the performance of the BIGHORN solution methods on problems that vary in complexity from laminar to turbulent flows. Wherever possible, some form of solution verification has been attempted to identify sensitivities in the solution methods, and suggest best practices when using BIGHORN.

97 MATHEMATICS AND COMPUTING↗

Progress toward a new implementation of the mortar finite element method in MOOSE

The mortar finite element method has been used for many years in a variety of applications, including the enforcement of continuity conditions across decomposed domains, the implementation of Dirichlet boundary conditions, obtaining improved estimates of surface fluxes, and for solving large deformation contact mechanics problems. There is a currently great deal of interest in developing more robust mechanical and thermal contact solution strategies in the MOOSE framework and physics modules, and schemes based on the mortar finite element approach appear to be a promising avenue of development. There are a number of challenges associated with the development of a robust Lagrange multiplier based formulation of the mortar finite element method which can be tackled using the relatively simple framework of thermal contact problems, before tackling more complicated applications such as thermomechanical contact. In this report, we describe several aspects of our mortar finite element method implementation for solving thermal contact problems. The approach and notation used are based primarily based on the work of Bin Yang et al. ("Two dimensional mortar contact methods for large deformation frictional sliding," International Journal for Numerical Methods in Engineering 62(9), 2005).

97 MATHEMATICS AND COMPUTING↗

Analysis of superconducting electromagnetic finite elements based on a magnetic vector potential variational principle

Electromagnetic finite elements are extended based on a variational principle that uses the electromagnetic four potential as primary variable. The variational principle is extended to include the ability to predict a nonlinear current distribution within a conductor. The extension of this theory is first done on a normal conductor and tested on two different problems. In both problems, the geometry remains the same, but the material properties are different. The geometry is that of a 1-D infinite wire. The first problem is merely a linear control case used to validate the new theory. The second problem is made up of linear conductors with varying conductivities. Both problems perform well and predict current densities that are accurate to within a few ten thousandths of a percent of the exact values. The fourth potential is then removed, leaving only the magnetic vector potential, and the variational principle is further extended to predict magnetic potentials, magnetic fields, the number of charge carriers, and the current densities within a superconductor. The new element produces good results for the mean magnetic field, the vector potential, and the number of superconducting charge carriers despite a relatively high system condition number. The element did not perform well in predicting the current density. Numerical problems inherent to this formulation are explored and possible remedies to produce better current predicting finite elements are presented.

Schuler, James J.↗

Combining Comparison Functions and Finite Element Approximations in CFD

In a variety of potential flow applications, the modal element method has been shown to significantly reduce the numerical grid, employ a more precise grid termination boundary condition, and give theoretical insight to the flow physics. The method employs eigenfunctions to replace the numerical grid over significant portions of the flow field. Generally, a numerical grid is employed around obstacles with complex geometry while eigenfunctions are applied to regions in the flow field where the boundary conditions can easily be satisfied. To handle a wider class of computational fluid dynamics (CFD) problems, the present paper extends the modal element to include function approximations which do not satisfy the governing differential equation. To accomplish this task, a double modal series approximation and weighted residual constraints are developed to force the comparison functions to satisfy the governing differential equation and to interface properly with the finite element solution. As an example, the method is applied to the problem of potential flow in a channel with two-dimensional cylindrical like obstacles. The calculated flow fields are in excellent agreement with exact analytical solutions.

Baumeister, Kenneth J.↗