Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “computational challenges”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 811 records · Page 45

Implementation of Parallel Dynamic Simulation on Shared-Memory vs. Distributed-Memory Environments

Power system dynamic simulation computes the system response to a sequence of large disturbance, such as sudden changes in generation or load, or a network short circuit followed by protective branch switching operation. It consists of a large set of differential and algebraic equations, which is computational intensive and challenging to solve using single-processor based dynamic simulation solution. High-performance computing (HPC) based parallel computing is a very promising technology to speed up the computation and facilitate the simulation process. This paper presents two different parallel implementations of power grid dynamic simulation using Open Multi-processing (OpenMP) on shared-memory platform, and Message Passing Interface (MPI) on distributed-memory clusters, respectively. The difference of the parallel simulation algorithms and architectures of the two HPC technologies are illustrated, and their performances for running parallel dynamic simulation are compared and demonstrated.

dynamic simulation↗

Evolutionary Optimization for Neuromorphic Systems

Designing and training an appropriate spiking neural network for neuromorphic deployment remains an open challenge in neuromorphic computing. In 2016, we introduced an approach for utilizing evolutionary optimization to address this challenge called Evolutionary Optimization for Neuromorphic Systems (EONS). In this work, we present an improvement to this approach that enables rapid prototyping of new applications of spiking neural networks in neuromorphic systems. We discuss the overall EONS framework and its improvements over the previous implementation. We present several case studies of how EONS can be used, including to train spiking neural networks for classification and control tasks, to train under hardware constraints, to evolve a reservoir for a liquid state machine, and to evolve smaller networks using multi-objective optimization.

Schuman, Catherine↗

Center for Scalable Application Development Software (Final Report)

The Center for Scalable Application Development Software (CScADS) was established as a part- nership between Rice University, Argonne National Laboratory, University of California Berkeley, University of Tennessee – Knoxville, and University of Wisconsin – Madison. CScADS pursued an integrated set of activities with the aim of increasing the productivity of DOE computational scientists by catalyzing the development of systems software, libraries, compilers, and tools for leadership computing platforms. Principal Center activities were workshops to engage the research community in the challenges of leadership computing, research and development of open-source software, and work with computational scientists to help them develop codes for leadership computing platforms. This final report summarizes CScADS activities at Rice University in these areas.

97 MATHEMATICS AND COMPUTING↗

ExaWind: Opportunity for Discovery

The predictive simulation of the dynamics of modern wind turbines and wind farms is a high-performance-computing (HPC) grand challenge. Modern wind turbines are the largest rotating machines in the world, with rotor diameters exceeding 200 meters, and with heights well into the atmospheric boundary layer. To address this grand challenge, the U.S. Department of Energy (DOE) Wind Energy Technologies Office and the Exascale Computing Project have been supporting the creation of the ExaWind modeling and simulation environment since 2016. ExaWind is composed of the incompressible-flow computational-fluid-dynamics (CFD) solvers AMR-Wind and Nalu-Wind and the wind-turbine-dynamics solver OpenFAST. In our hybrid CFD approach, Nalu-Wind unstructured-grid models resolve the near-body flow around the turbine; those models are embedded in, and two-way coupled to, an AMR-Wind structured-grid mesh through overset meshes. In this talk I give an overview of ExaWind software stack and describe how it is being used to address important problems in wind energy.

computational fluid dynamics↗

Heterogeneous Machine Learning on High Performance Computing for End to End Driving of Autonomous Vehicles

Current artificial intelligence techniques for end to end driving of autonomous vehicles typically rely on a single form of learning or training processes along with a corresponding dataset or simulation environment. Relatively speaking, success has been shown for a variety of learning modalities in which it can be shown that the machine can successfully “drive” a vehicle. However, the realm of real-world driving extends significantly beyond the realm of limited test environments for machine training. This creates an enormous gap in capability between these two realms. With their superior neural network structures and learning capabilities, humans can be easily trained within a short period of time to proceed from limited test environments to real world driving. For machines though, this gap is guarded by at least two challenges: 1) machine learning techniques remain brittle and unable to generalize to a wide range of scenarios, and 2) effective training data that enhances generalization and generates the desired driving behavior. Further, each challenge can be computationally intensive on its own thereby exasperating the gap. Moreover, is has not yet been shown that a single form of learning or training is capable of addressing a large range of scenarios. As a result, solving the first challenge does not inherently solve the second and vice versa. The work described here discusses an approach to address the first challenge that would also provide a foundation for solving the second. Our approach utilizes a combination of conditional imitation learning with a static dataset, reinforcement learning with a simulation environment, and high-performance computing to train a neural network. As a result, this reduces the “time to solution” from to the existing techniques for autonomous driving and provides an extensible framework to address the second key challenge.

autonomous vehicles↗

A low-rank power iteration scheme for neutron transport criticality problems

Computing effective eigenvalues for neutron transport often requires a fine numerical resolution. Here, the main challenge of such computations is the high memory effort of classical solvers, which limits the accuracy of chosen discretizations. In this work, we derive a method for the computation of effective eigenvalues when the underlying solution has a low-rank structure. This is accomplished by utilizing dynamical low-rank approximation (DLRA), which is an efficient strategy to derive time evolution equations for low-rank solution representations. The main idea is to interpret the iterates of the classical inverse power iteration as pseudo-time steps and apply the DLRA concepts in this framework. In our numerical experiment, we demonstrate that our method significantly reduces memory requirements while achieving the desired accuracy. Analytic investigations show that the proposed iteration scheme inherits the convergence speed of the inverse power iteration, at least for a simplified setting.

97 MATHEMATICS AND COMPUTING↗

Multiparticle cumulant mapping for Coulomb explosion imaging: Calculations and algorithm

We present a versatile cumulant mapping algorithm for analyzing correlated particle emission, offering insights into complex electronic and nuclear dynamics. Recently, we have demonstrated the use of cumulant mapping to extract information-rich correlations between the momenta of multiple fragments produced in Coulomb explosion imaging experiments [C. Cheng et al., Phys. Rev. Lett. 130, 093001 (2023)]. We define cumulant mapping in terms of histograms, enabling fast computation of linear (additive) observables. However, applying the same algorithm to nonlinear (nonadditive) observables poses challenges, as the computation time of conventional estimators scales nonlinearly with data size. To overcome this, we develop estimators and an accompanying algorithm to enable computationally efficient estimation of the cumulant of interest. Comparisons of computation times and signal-to-noise ratios reveal the superior performance of our approach. This method is demonstrated on the (D+, D+, C+, O+) dissociation channel of CD 2 ⁢O 4+ produced in a strong-field ionization experiment. Additionally, Poisson statistics are used to simulate the two methods and provide insights into the efficiency of our algorithm. The proposed methodology unlocks efficient computation of cumulant mapping for a broader range of complex systems and observables, such as the laser pulse dependence of ionization dynamics.

74 ATOMIC AND MOLECULAR PHYSICS↗

Experimental data for damage mechanics simulation challenge

While there are many computational approaches for simulating damage in rock and other materials, few have been ground truth tested with either known experimental data or with blind data sets. Here, in this work, we present a bench-mark laboratory data set for a damage mechanics challenge to compare computational approaches on damage evolution in brittle-ductile materials. The samples were fabricated through additive manufacturing to produce repeatable specimens designed to fail in controlled ways. The failure was induced in the samples using a 3-point bending test to produce different Modes such as Mode I and mixed Modes including I-II, I-III and I-II-III Modes to generate a calibration data set and a blind challenge data set. Data collected included spatial and temporal measurements from traditional digital load–displacement sensors, 2D digital image correlation measurement to map surface deformations, 3D X-ray microscopy to ground-truth the crack-failure geometry, and laser profilometry to capture surface roughness. The data sets are available, on a data repository, to the community to advance computational models to improve our ability to predict damage in brittle-ductile materials.

3-point bending↗

DeepSurveySim: Simulation Software and Benchmark Challenges for Astronomical Observation Scheduling

Modern astronomical surveys have multiple competing scientific goals. Optimizing the observation schedule for these goals presents significant computational and theoretical challenges, and state-of-the-art methods rely on expensive human inspection of simulated telescope schedules. Automated methods, such as Reinforcement Learning (RL), have recently been explored to accelerate scheduling. DeepSurveySim provides methods for tracking and approximating sky conditions for a set of observations from a user-supplied telescope configuration.

79 ASTRONOMY AND ASTROPHYSICS↗

DeepSurveySim: Simulation Software and Benchmark Challenges for Astronomical Observation Scheduling

Modern astronomical surveys have multiple competing scientific goals. Optimizing the observation schedule for these goals presents significant computational and theoretical challenges, and state-of-the-art methods rely on expensive human inspection of simulated telescope schedules. Automated methods, such as reinforcement learning, have recently been explored to accelerate scheduling. However, there do not yet exist benchmark data sets or user-friendly software frameworks for testing and comparing these methods. We present DeepSurveySim -- a high-fidelity and flexible simulation tool for use in telescope scheduling. DeepSurveySim provides methods for tracking and approximating sky conditions for a set of observations from a user-supplied telescope configuration. We envision this tool being used to produce benchmark data sets and for evaluating the efficacy of ground-based telescope scheduling algorithms, particularly for machine learning algorithms that would suffer in efficacy if limited to real data for training.We introduce three example survey configurations and related code implementations as benchmark problems that can be simulated with DeepSurveySim.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Automatic Halo Management for the Uintah GPU-Heterogeneous Asynchronous Many-Task Runtime

The Uintah computational framework is used for the parallel solution of partial differential equations on adaptive mesh refinement grids using modern supercomputers. Uintah is structured with an application layer and a separate runtime system. Uintah is based on a distributed directed acyclic graph of computational tasks, with a task scheduler that efficiently schedules and executes these tasks on both CPU cores and on-node accelerators. The runtime system identifies task dependencies, creates a task graph prior to the execution of these tasks, automatically generates MPI message tags, and automatically performs halo transfers for simulation variables. Automating halo transfers in a heterogeneous environment poses significant challenges when tasks compute within a few milliseconds, as runtime overhead affects wall time execution, or when simulation variables require large halos spanning most or all of the computational domain, as task dependencies become expensive to process. These challenges are magnified at production scale when application developers require each compute node perform thousands of different halo transfers among thousands simulation variables. The principal contribution of this work is to (1) identify and address inefficiencies that arise when mapping tasks onto the GPU in the presence of automated halo transfers, (2) implement new schemes to reduce runtime system overhead, (3) minimize application developer involvement with the runtime, and (4) show overhead reduction results from these improvements.

Concurrency↗

Deep Space Network (DSN), Network Operations Control Center (NOCC) computer-human interfaces

The technical challenges, engineering solutions, and results of the NOCC computer-human interface design are presented. The use-centered design process was as follows: determine the design criteria for user concerns; assess the impact of design decisions on the users; and determine the technical aspects of the implementation (tools, platforms, etc.). The NOCC hardware architecture is illustrated. A graphical model of the DSN that represented the hierarchical structure of the data was constructed. The DSN spacecraft summary display is shown. Navigation from top to bottom is accomplished by clicking the appropriate button for the element about which the user desires more detail. The telemetry summary display and the antenna color decision table are also shown.

Ellman, Alvin↗

Flexible Data Fusion for Air Quality Estimation and Forecasting in Google Earth Engine to support Global Health Management Needs

The assessment and forecasting of air quality around the world at high spatial and temporal resolution can be enhanced by integrating data from multiple sources including models, satellites, regulatory monitors, and low-cost sensors. Such integration is subject to numerous technical challenges, however, including heterogeneous data resolution and formatting, different levels of data availability and reliability, and computational and capacity challenges to developing data fusion tools and platforms. This presentation will provide an overview of a NASA-funded effort to develop a data fusion system within the Google Earth Engine platform which integrates these air quality data sources to produce comprehensive assessments and forecasts of key air pollutants at sub-daily and sub-city scales. The system is being developed in collaboration with city- and regional-level air quality managers, and will provide them with information to the assess and anticipate the health impacts of poor air quality, track local changes in air quality due to ongoing transportation and land use changes, and identify potential gaps in their current air quality monitoring strategies. The presentation will report advances achieved through the project, including bringing local air quality monitoring data into Google Earth Engine, quantifying uncertainties in air quality estimates and forecasts, and tailored communications tools providing integration into end-user processes to meet their needs.

Carl Malings↗

Flexible Data Fusion for Air Quality Estimation and Forecasting in Google Earth Engine to support Global Health Management Needs

The assessment and forecasting of air quality around the world at high spatial and temporal resolution can be enhanced by integrating data from multiple sources including models, satellites, regulatory monitors, and low-cost sensors. Such integration is subject to numerous technical challenges, however, including heterogeneous data resolution and formatting, different levels of data availability and reliability, and computational and capacity challenges to developing data fusion tools and platforms. This presentation will provide an overview of a NASA-funded effort to develop a data fusion system within the Google Earth Engine platform which integrates these air quality data sources to produce comprehensive assessments and forecasts of key air pollutants at sub-daily and sub-city scales. The system is being developed in collaboration with city- and regional-level air quality managers and will provide them with information to the assess and anticipate the health impacts of poor air quality, track local changes in air quality due to ongoing transportation and land use changes, and identify potential gaps in their current air quality monitoring strategies. The presentation will report advances achieved through the project, including bringing local air quality monitoring data into Google Earth Engine, quantifying uncertainties in air quality estimates and forecasts, and tailored communications tools providing integration into end-user processes to meet their needs.

Nathan R. Pavlovic↗

ExaWind at NREL: Upping the Ante

The objective of the ExaWind component of the Exascale Computing Project is to deliver many-turbine blade-resolved simulations in complex terrain. These simulations bring new challenges to both compute and analysis of the resulting data. In this paper/video, we visually explore the impact of ExaWind on wind simulations through two studies of a small wind farm under two atmospheric conditions. We then turn to analysis and review tools that visualization researchers at NREL use to answer the challenges that ExaWind brings.

collaborative visualization↗

An expanded evaluation of protein function prediction methods shows an improvement in accuracy

Background: A major bottleneck in our understanding of the molecular underpinnings of life is the assignment of function to proteins. While molecular experiments provide the most reliable annotation of proteins, their relatively low throughput and restricted purview have led to an increasing role for computational function prediction. However, assessing methods for protein function prediction and tracking progress in the field remain challenging. Results: We conducted the second critical assessment of functional annotation (CAFA), a timed challenge to assess computational methods that automatically assign protein function. We evaluated 126 methods from 56 research groups for their ability to predict biological functions using Gene Ontology and gene-disease associations using Human Phenotype Ontology on a set of 3681 proteins from 18 species. CAFA2 featured expanded analysis compared with CAFA1, with regards to data set size, variety, and assessment metrics. To review progress in the field, the analysis compared the best methods from CAFA1 to those of CAFA2. Conclusions: The top-performing methods in CAFA2 outperformed those from CAFA1. This increased accuracy can be attributed to a combination of the growing number of experimental annotations and improved methods for function prediction. The assessment also revealed that the definition of top-performing algorithms is ontology specific, that different performance metrics can be used to probe the nature of accurate predictions, and the relative diversity of predictions in the biological process and human phenotype ontologies. While there was methodological improvement between CAFA1 and CAFA2, the interpretation of results and usefulness of individual methods remain context-dependent.

59 BASIC BIOLOGICAL SCIENCES↗

Toward Quantitatively Accurate Calculation of the Redox-Associated Acid–Base and Ligand Binding Equilibria of Aquacobalamin

In redox processes in complex transition metal-containing species are often intimately associated with changes in ligand protonation states and metal coordination number. Moreover, a major challenge is therefore to develop consistent computational approaches for computing pH-dependent redox and ligand dissociation properties of organometallic species. Reduction of the Co center in the vitamin B12 derivative aquacobalamin can be accompanied by ligand dissociation, protonation, or both, making these properties difficult to compute accurately. We examine this challenge here by using density functional theory and continuum solvation to compute Co ligand binding equilibrium constants (Kon/off), pKas and reduction potentials for models of aquacobalamin in aqueous solution. We consider two models for cobalamin ligand coordination: the first follows the hexa, penta, tetra coordination scheme for Co III , Co II , and Co I species, respectively, and the second model features saturation of each vacant axial coordination site on Co II and Co I species with a single, explicit water molecule to maintain six directly interacting ligands or water molecules in each oxidation state. Comparing these two coordination schemes in combination with five dispersion-corrected density functionals, we find that the accuracy of the computed properties is largely independent of the scheme used, but including only a continuum representation of the solvent yields marginally better results than saturating the first solvation shell around Co throughout. PBE performs best, displaying balanced accuracy and superior performance overall, with RMS errors of 80 mV for seven reduction potentials, 2.0 log units for five pK a s and 2.3 log units for two log K on/off values for the aquacobalamin system. Furthermore, we find that the BP86 functional commonly used in corrinoid studies suffers from erratic behavior and inaccurate descriptions of Co axial ligand binding, leading to substantial errors in predicted pK a s and K on/off values. Finally, these findings demonstrate the effectiveness of the present approach for computing electrochemical and thermodynamic properties of a complex transition metal-containing cofactor.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗