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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 811 records · Page 45
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

An ACA 1 mm survey of HzRGs in the ELAIS-S1: survey description and first results

ABSTRACT Radio-emitting jets might be one of the main ingredients shaping the evolution of massive galaxies in the Universe since early cosmic times. However, identifying early radio active galactic nuclei (AGNs) and confirming this scenario have been hard to accomplish, with studies of samples of radio AGN hosts at z > 2 becoming routinely possible only recently. With the above in mind, we have carried out a survey with the Atacama Compact Array (ACA or Morita Array) at 1.3 mm (rms = 0.15 mJy) of 36 high-redshift radio AGN candidates found within 3.9 deg2 in the ELAIS-S1 field. The work presented here describes the survey and showcases a preliminary set of results. The selection of the sample was based on three criteria making use of infrared (IR) and radio fluxes only. The criterion providing the highest selection rate of high-redshift sources (86 per cent at z > 0.8) is one combining an IR colour cut and radio flux cut (S5.8μm/S3.6μm > 1.3 and $S_{\rm 1.4\, GHz}\gt 1\,$ mJy). Among the sample of 36 sources, 16 show a millimetre (mm) detection. In eight of these cases, the emission has a non-thermal origin. A zsp = 1.58 object, with a mm detection of non-thermal origin, shows a clear spatial offset between the jet-dominated mm continuum emission and that of the host’s molecular gas, as traced by serendipitously detected CO(5-4) emission. Among the objects with serendipitous line detections there is a source with a narrow jet-like region, as revealed by CS(6-5) emission stretching 20 kpc out of the host galaxy.

Messias, Hugo G.↗
DOE OSTI2021

Evidence for galaxy assembly bias in BOSS CMASS redshift-space galaxy correlation function

ABSTRACT Building accurate and flexible galaxy–halo connection models is crucial in modelling galaxy clustering on non-linear scales. Recent studies have found that halo concentration by itself cannot capture the full galaxy assembly bias effect and that the local environment of the halo can be an excellent indicator of galaxy assembly bias. In this paper, we propose an extended halo occupation distribution (HOD) model that includes both a concentration-based assembly bias term and an environment-based assembly bias term. We use this model to achieve a good fit (χ2/degrees of freedom = 1.35) on the 2D redshift-space two-point correlation function (2PCF) of the Baryon Oscillation Spectroscopic Survey (BOSS) CMASS galaxy sample. We find that the inclusion of both assembly bias terms is strongly favoured by the data and the standard five-parameter HOD model is strongly rejected. More interestingly, the redshift-space 2PCF drives the assembly bias parameters in a way that preferentially assigns galaxies to lower mass haloes. This results in galaxy–galaxy lensing predictions that are within 1σ agreement with the observation, alleviating the perceived tension between galaxy clustering and lensing. We also showcase a consistent 3σ–5σ preference for a positive environment-based assembly bias that persists over variations in the fit. We speculate that the environmental dependence might be driven by underlying processes such as mergers and feedback, but might also be indicative of a larger halo boundaries such as the splashback radius. Regardless, this work highlights the importance of building flexible galaxy–halo connection models and demonstrates the extra constraining power of the redshift-space 2PCF.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Stringent σ8 constraints from small-scale galaxy clustering using a hybrid MCMC + emulator framework

ABSTRACT We present a novel simulation-based hybrid emulator approach that maximally derives cosmological and Halo Occupation Distribution (HOD) information from non-linear galaxy clustering, with sufficient precision for DESI Year 1 (Y1) analysis. Our hybrid approach first samples the HOD space on a fixed cosmological simulation grid to constrain the high-likelihood region of cosmology + HOD parameter space, and then constructs the emulator within this constrained region. This approach significantly reduces the parameter volume emulated over, thus achieving much smaller emulator errors with fixed number of training points. We demonstrate that this combined with state-of-the-art simulations result in tight emulator errors comparable to expected DESI Y1 LRG sample variance. We leverage the new abacussummit simulations and apply our hybrid approach to CMASS non-linear galaxy clustering data. We infer constraints on σ8 = 0.762 ± 0.024 and fσ8(zeff = 0.52) = 0.444 ± 0.016, the tightest among contemporary galaxy clustering studies. We also demonstrate that our fσ8 constraint is robust against secondary biases and other HOD model choices, a critical first step towards showcasing the robust cosmology information accessible in non-linear scales. We speculate that the additional statistical power of DESI Y1 should tighten the growth rate constraints by at least another 50–60 ${{\ \rm per\ cent}}$, significantly elucidating any potential tension with Planck. We also address the ‘lensing is low’ tension, which we find to be in the same direction as a potential tension in fσ8. We show that the combined effect of a lower fσ8 and environment-based bias accounts for approximately $50{{\ \rm per\ cent}}$ of the discrepancy.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Accelerating cosmological inference with Gaussian processes and neural networks – an application to LSST Y1 weak lensing and galaxy clustering

ABSTRACT Studying the impact of systematic effects, optimizing survey strategies, assessing tensions between different probes and exploring synergies of different data sets require a large number of simulated likelihood analyses, each of which cost thousands of CPU hours. In this paper, we present a method to accelerate cosmological inference using emulators based on Gaussian process regression and neural networks. We iteratively acquire training samples in regions of high posterior probability which enables accurate emulation of data vectors even in high dimensional parameter spaces. We showcase the performance of our emulator with a simulated 3×2 point analysis of LSST-Y1 with realistic theoretical and systematics modelling. We show that our emulator leads to high-fidelity posterior contours, with an order of magnitude speed-up. Most importantly, the trained emulator can be re-used for extremely fast impact and optimization studies. We demonstrate this feature by studying baryonic physics effects in LSST-Y1 3×2 point analyses where each one of our MCMC runs takes approximately 5 min. This technique enables future cosmological analyses to map out the science return as a function of analysis choices and survey strategy.

Astronomy & Astrophysics↗
DOE OSTI2023

2D k -th nearest neighbour statistics: a highly informative probe of galaxy clustering

ABSTRACT Beyond standard summary statistics are necessary to summarize the rich information on non-linear scales in the era of precision galaxy clustering measurements. For the first time, we introduce the 2D k-th nearest neighbour (kNN) statistics as a summary statistic for discrete galaxy fields. This is a direct generalization of the standard 1D kNN by disentangling the projected galaxy distribution from the redshift-space distortion signature along the line-of-sight. We further introduce two different flavours of 2D kNNs that trace different aspects of the galaxy field: the standard flavour which tabulates the distances between galaxies and random query points, and a ‘DD’ flavour that tabulates the distances between galaxies and galaxies. We showcase the 2D kNNs’ strong constraining power both through theoretical arguments and by testing on realistic galaxy mocks. Theoretically, we show that 2D kNNs are computationally efficient and directly generate other statistics such as the popular two-point correlation function (2PCF), voids probability function, and counts-in-cell statistics. In a more practical test, we apply the 2D kNN statistics to simulated galaxy mocks that fold in a large range of observational realism and recover parameters of the underlying extended halo occupation distribution (HOD) model that includes velocity bias and galaxy assembly bias. We find unbiased and significantly tighter constraints on all aspects of the HOD model with the 2D kNNs, both compared to the standard 1D kNN, and the classical redshift-space 2PCF.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Hidden deep in the halo: selection of a reduced proper motion halo catalogue and mining retrograde streams in the velocity space

ABSTRACT The Milky Way halo is one of the few galactic haloes that provides a unique insight into galaxy formation by resolved stellar populations. Here, we present a catalogue of ∼47 million halo stars selected independent of parallax and line-of-sight velocities, using a combination of Gaia DR3 proper motion and photometry by means of their reduced proper motion. We select high tangential velocity (halo) main sequence stars and fit distances to them using their simple colour-absolute-magnitude relation. This sample reaches out to ∼21 kpc with a median distance of 6.6 kpc thereby probing much further out than would be possible using reliable Gaia parallaxes. The typical uncertainty in their distances is $0.57_{-0.26}^{+0.56}$ kpc. Using the colour range 0.45 < (G0 − GRP, 0) < 0.715, where the main sequence is narrower, gives an even better accuracy down to $0.39_{-0.12}^{+0.18}$ kpc in distance. The median velocity uncertainty for stars within this colour range is 15.5 km s−1. The distribution of these sources in the sky, together with their tangential component velocities, are very well-suited to study retrograde substructures. We explore the selection of two complex retrograde streams: GD-1 and Jhelum. For these streams, we resolve the gaps, wiggles and density breaks reported in the literature more clearly. We also illustrate the effect of the kinematic selection bias towards high proper motion stars and incompleteness at larger distances due to Gaia’s scanning law. These examples showcase how the full RPM catalogue made available here can help us paint a more detailed picture of the build-up of the Milky Way halo.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Constraints on S 8 from a full-scale and full-shape analysis of redshift-space clustering and galaxy–galaxy lensing in BOSS

ABSTRACT We present a novel simulation-based cosmological analysis of galaxy–galaxy lensing and galaxy redshift-space clustering. Compared to analysis methods based on perturbation theory, our simulation-based approach allows us to probe a much wider range of scales, $0.4 \, h^{-1} \, \mathrm{Mpc}$ to $63 \, h^{-1} \, \mathrm{Mpc}$, including highly non-linear scales, and marginalizes over astrophysical effects such as assembly bias. We apply this framework to data from the Baryon Oscillation Spectroscopic Survey LOWZ sample cross-correlated with state-of-the-art gravitational lensing catalogues from the Kilo Degree Survey and the Dark Energy Survey. We show that gravitational lensing and redshift-space clustering when analysed over a large range of scales place tight constraints on the growth-of-structure parameter $S_8 = \sigma _8 \sqrt{\Omega _{\rm m} / 0.3}$. Overall, we infer S8 = 0.792 ± 0.022 when analysing the combination of galaxy–galaxy lensing and projected galaxy clustering and S8 = 0.771 ± 0.027 for galaxy redshift-space clustering. These findings highlight the potential constraining power of full-scale studies over studies analysing only large scales and also showcase the benefits of analysing multiple large-scale structure surveys jointly. Our inferred values for S8 fall below the value inferred from the CMB, S8 = 0.834 ± 0.016. While this difference is not statistically significant by itself, our results mirror other findings in the literature whereby low-redshift large-scale structure probes infer lower values for S8 than the CMB, the so-called S8-tension.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Visualizing the mass transfer flow in direct-impact accretion

We use a variety of visualization techniques to display the interior and surface flows in a double white dwarf binary undergoing direct-impact mass transfer and evolving dynamically to a merger. The structure of the flow can be interpreted in terms of standard dynamical, cyclostrophic, and geostrophic arguments. We describe and showcase some visualization and analysis techniques of potential interest for astrophysical hydrodynamics. In the context of R Coronae Borealis stars, we find that mixing of accretor material with donor material at the shear layer between the fast accretion belt and the slower rotating accretor body will always result in some dredge-up. We also discuss briefly some potential applications to other types of binaries.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Neural network-based model of galaxy power spectrum: fast full-shape galaxy power spectrum analysis

ABSTRACT We present a neural network-based emulator for the galaxy redshift-space power spectrum that enables several orders of magnitude acceleration in the galaxy clustering parameter inference, while preserving 3$\sigma$ accuracy better than 0.5 per cent up to $k_{\mathrm{max}}$ = 0.25 $\, h\text{Mpc}^{-1}$ within Lambda-cold dark matter ($\Lambda$CDM) and around 0.5 per cent $w_0$–$w_a$CDM. Our surrogate model only emulates the galaxy bias-invariant terms of one-loop perturbation theory predictions, these terms are then combined analytically with galaxy bias terms, counter-terms, and stochastic terms in order to obtain the non-linear redshift-space galaxy power spectrum. This allows us to avoid any galaxy bias prescription in the training of the emulator, which makes it more flexible. Moreover, we include the redshift $z \in [0,1.4]$ in the training which further avoids the need for re-training the emulator. We showcase the performance of the emulator in recovering the cosmological parameters of $\Lambda$CDM by analysing the suite of 25 AbacusSummit simulations that mimic the Dark Energy Spectroscopic Instrument luminous red galaxies at $z=0.5$ and 0.8, together as the emission line galaxies at $z=0.8$. We obtain similar performance in all cases, demonstrating the reliability of the emulator for any galaxy sample at any redshift in $0 \lt z \lt 1.4$. We will make our emulator public at github repository.

Trusov, Svyatoslav (ORCID:0000000224146720)↗
DOE OSTI2025

Validation of the ESPRESSO wavelength calibration using iodine absorption cell spectra

ABSTRACT High-quality wavelength calibration is crucial for science cases like radial-velocity studies of exoplanets, the search for a possible variation of fundamental constants, and the redshift drift experiment. However, for state-of-the-art spectrographs, it has become difficult to verify the wavelength calibration on sky because no astrophysical source provides spectra with sufficiently stable or accurate wavelength information. We therefore propose to use iodine absorption cells to validate the wavelength calibration. Observing a bright and featureless star through the iodine cell emulates an astrophysical target with exactly known spectral features that can be analysed like any other science target, allowing to verify the wavelength calibration derived from the internal calibration sources and to identify systematics in the data processing. As demonstration, we temporarily installed an $\mathrm{I_2}$ absorption cell at ESPRESSO. Employing a full forward modelling approach of the $\mathrm{I_2}$ spectrum, including the instrumental line-spread function, we demonstrate wavelength calibration accuracy at the level of a few $\mathrm{m\,s^{-1}}$. We also show that wavelength measurements do depend on the geometry of the light-injection into the spectrograph fibers. This highlights the importance of probing exactly the same light path as science targets, something not possible with internal calibration sources alone. We also demonstrate excellent radial-velocity stability at the ${{< 20\, \mathrm{cm\,s^{-1}}}}$ level in a full end-to-end fashion, from sky to data product. Our study therefore showcases the great potential of absorption cells for the verification and long-term monitoring of the wavelength calibration as well as the unique insights they can provide.

Schmidt, Tobias M. (ORCID:0000000248337273)↗
DOE OSTI2019

Estimating redshift distributions using hierarchical logistic Gaussian processes

ABSTRACT This work uses hierarchical logistic Gaussian processes to infer true redshift distributions of samples of galaxies, through their cross-correlations with spatially overlapping spectroscopic samples. We demonstrate that this method can accurately estimate these redshift distributions in a fully Bayesian manner jointly with galaxy-dark matter bias models. We forecast how systematic biases in the redshift-dependent galaxy-dark matter bias model affect redshift inference. Using published galaxy-dark matter bias measurements from the Illustris simulation, we compare these systematic biases with the statistical error budget from a forecasted weak gravitational lensing measurement. If the redshift-dependent galaxy-dark matter bias model is mis-specified, redshift inference can be biased. This can propagate into relative biases in the weak lensing convergence power spectrum on the 10–30 per cent level. We, therefore, showcase a methodology to detect these sources of error using Bayesian model selection techniques. Furthermore, we discuss the improvements that can be gained from incorporating prior information from Bayesian template fitting into the model, both in redshift prediction accuracy and in the detection of systematic modelling biases.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2019

Self-consistent redshift estimation using correlation functions without a spectroscopic reference sample

ABSTRACT We present a new method to estimate redshift distributions and galaxy-dark matter bias parameters using correlation functions in a fully data driven and self-consistent manner. Unlike other machine learning, template, or correlation redshift methods, this approach does not require a reference sample with known redshifts. By measuring the projected cross- and auto-correlations of different galaxy sub-samples, e.g. as chosen by simple cells in colour–magnitude space, we are able to estimate the galaxy-dark matter bias model parameters, and the shape of the redshift distributions of each sub-sample. This method fully marginalizes over a flexible parametrization of the redshift distribution and galaxy-dark matter bias parameters of sub-samples of galaxies, and thus provides a general Bayesian framework to incorporate redshift uncertainty into the cosmological analysis in a data-driven, consistent, and reproducible manner. This result is improved by an order of magnitude by including cross-correlations with the cosmic microwave background and with galaxy–galaxy lensing. We showcase how this method could be applied to real galaxies. By using idealized data vectors, in which all galaxy-dark matter model parameters and redshift distributions are known, this method is demonstrated to recover unbiased estimates on important quantities, such as the offset Δz between the mean of the true and estimated redshift distribution and the 68 per cent, 95 per cent, and 99.5 per cent widths of the redshift distribution to an accuracy required by current and future surveys.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences

Abstract The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB), the US data center for the global PDB archive and a founding member of the Worldwide Protein Data Bank partnership, serves tens of thousands of data depositors in the Americas and Oceania and makes 3D macromolecular structure data available at no charge and without restrictions to millions of RCSB.org users around the world, including >660 000 educators, students and members of the curious public using PDB101.RCSB.org. PDB data depositors include structural biologists using macromolecular crystallography, nuclear magnetic resonance spectroscopy, 3D electron microscopy and micro-electron diffraction. PDB data consumers accessing our web portals include researchers, educators and students studying fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences. During the past 2 years, the research-focused RCSB PDB web portal (RCSB.org) has undergone a complete redesign, enabling improved searching with full Boolean operator logic and more facile access to PDB data integrated with >40 external biodata resources. New features and resources are described in detail using examples that showcase recently released structures of SARS-CoV-2 proteins and host cell proteins relevant to understanding and addressing the COVID-19 global pandemic.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Programmable gene regulation for metabolic engineering using decoy transcription factor binding sites

Abstract Transcription factor decoy binding sites are short DNA sequences that can titrate a transcription factor away from its natural binding site, therefore regulating gene expression. In this study, we harness synthetic transcription factor decoy systems to regulate gene expression for metabolic pathways in Escherichia coli. We show that transcription factor decoys can effectively regulate expression of native and heterologous genes. Tunability of the decoy can be engineered via changes in copy number or modifications to the DNA decoy site sequence. Using arginine biosynthesis as a showcase, we observed a 16-fold increase in arginine production when we introduced the decoy system to steer metabolic flux towards increased arginine biosynthesis, with negligible growth differences compared to the wild type strain. The decoy-based production strain retains high genetic integrity; in contrast to a gene knock-out approach where mutations were common, we detected no mutations in the production system using the decoy-based strain. We further show that transcription factor decoys are amenable to multiplexed library screening by demonstrating enhanced tolerance to pinene with a combinatorial decoy library. Our study shows that transcription factor decoy binding sites are a powerful and compact tool for metabolic engineering.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

Unveiling the microbial realm with VEBA 2.0: a modular bioinformatics suite for end-to-end genome-resolved prokaryotic, (micro)eukaryotic and viral multi-omics from either short- or long-read sequencing

Abstract The microbiome is a complex community of microorganisms, encompassing prokaryotic (bacterial and archaeal), eukaryotic, and viral entities. This microbial ensemble plays a pivotal role in influencing the health and productivity of diverse ecosystems while shaping the web of life. However, many software suites developed to study microbiomes analyze only the prokaryotic community and provide limited to no support for viruses and microeukaryotes. Previously, we introduced the Viral Eukaryotic Bacterial Archaeal (VEBA) open-source software suite to address this critical gap in microbiome research by extending genome-resolved analysis beyond prokaryotes to encompass the understudied realms of eukaryotes and viruses. Here we present VEBA 2.0 with key updates including a comprehensive clustered microeukaryotic protein database, rapid genome/protein-level clustering, bioprospecting, non-coding/organelle gene modeling, genome-resolved taxonomic/pathway profiling, long-read support, and containerization. We demonstrate VEBA’s versatile application through the analysis of diverse case studies including marine water, Siberian permafrost, and white-tailed deer lung tissues with the latter showcasing how to identify integrated viruses. VEBA represents a crucial advancement in microbiome research, offering a powerful and accessible software suite that bridges the gap between genomics and biotechnological solutions.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2016

ROCker: accurate detection and quantification of target genes in short-read metagenomic data sets by modeling sliding-window bitscores

Functional annotation of metagenomic and metatranscriptomic data sets relies on similarity searches based on e-value thresholds resulting in an unknown number of false positive and negative matches. To overcome these limitations, we introduce ROCker, aimed at identifying position-specific, most-discriminant thresholds in sliding windows along the sequence of a target protein, accounting for non-discriminative domains shared by unrelated proteins. ROCker employs the receiver operating characteristic (ROC) curve to minimize false discovery rate (FDR) and calculate the best thresholds based on how simulated shotgun metagenomic reads of known composition map onto well-curated reference protein sequences and thus, differs from HMM profiles and related methods. We showcase ROCker using ammonia monooxygenase (amoA) and nitrous oxide reductase (nosZ) genes, mediating oxidation of ammonia and the reduction of the potent greenhouse gas, N 2 O, to inert N 2 , respectively. ROCker typically showed 60-fold lower FDR when compared to the common practice of using fixed e-values. Previously uncounted ‘atypical’ nosZ genes were found to be two times more abundant, on average, than their typical counterparts in most soil metagenomes and the abundance of bacterial amoA was quantified against the highly-related particulate methane monooxygenase (pmoA). Therefore, ROCker can reliably detect and quantify target genes in short-read metagenomes.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Recent progress in MnBi2 n Te3 n +1 intrinsic magnetic topological insulators: crystal growth, magnetism and chemical disorder

ABSTRACT The search for magnetic topological materials has been at the forefront of condensed matter research for their potential to host exotic states such as axion insulators, magnetic Weyl semimetals, Chern insulators, etc. To date, the MnBi2nTe3n+1 family is the only group of materials showcasing van der Waals-layered structures, intrinsic magnetism and non-trivial band topology without trivial bands at the Fermi level. The interplay between magnetism and band topology in this family has led to the proposal of various topological phenomena, including the quantum anomalous Hall effect, quantum spin Hall effect and quantum magnetoelectric effect. Among these, the quantum anomalous Hall effect has been experimentally observed at record-high temperatures, highlighting the unprecedented potential of this family of materials in fundamental science and technological innovation. In this paper, we provide a comprehensive review of the research progress in this intrinsic magnetic topological insulator family, with a focus on single-crystal growth, characterization of chemical disorder, manipulation of magnetism through chemical substitution and external pressure, and important questions that remain to be conclusively answered.

36 MATERIALS SCIENCE↗
DOE OSTI2024

A butterfly-shaped acceptor with rigid skeleton and unique assembly enables both efficient organic photovoltaics and high-speed organic photodetectors

ABSTRACT It remains challenging to design efficient bifunctional semiconductor materials in organic photovoltaic and photodetector devices. Here, we report a butterfly-shaped molecule, named WD-6, which exhibits low energy disorder and small reorganization energy due to its enhanced molecular rigidity and unique assembly with strong intermolecular interaction. The binary photovoltaic device based on PM6:WD-6 achieved an efficiency of 18.41%. Notably, an efficiency of 19.42% was achieved for the ternary device based on PM6:BTP-eC9:WD-6. Moreover, the photodetection device based on WD-6 demonstrated an ultrafast response speed (205 ns response time at λ of 820 nm) and a high cutoff frequency of −3 dB (2.45 MHz), surpassing the values of most commercial Si photodiodes. Based on these findings, we showcased an application of the WD-6-based photodetection device in high-speed optical communication. These results offer valuable insights into the design of organic semiconductor materials capable of simultaneously exhibiting high photovoltaic and photodetective performance.

Science & Technology - Other Topics↗