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DOE OSTI2023

The increasing threat of Rift Valley fever virus globalization: strategic guidance for protection and preparation

Rift Valley fever virus (RVFV) (Bunyavirales: Phlebovirus) is a prominent vector-borne zoonotic disease threat to global agriculture and public health. Risks of introduction into nonendemic regions are tied to changing climate regimes and other dynamic environmental factors that are becoming more prevalent, as well as virus evolutionary factors and human/animal movement. Endemic to the African continent, RVFV has caused large epizootics at the decadal scale since the early 20th century but has spread to the Arabian Peninsula and shows increasing patterns of interepizootic transmission on the annual scale. This virus can be transmitted by mosquitoes as well as through direct contact with infected tissues and can cause sporadic to widespread morbidity and mortality in domestic ungulate livestock as well as humans. High viremias in infected livestock moved for legal and illegal trade as well as in infected mosquitoes or human travelers can spread this virus worldwide. With increasing global commerce, it is likely RVFV will be introduced to new areas with suitable hosts, mosquito vector species, and environments. However, the strong mosquito component of RVFV epidemiology combined with advancements in vaccines, diagnostics, and virus evolutionary factors create opportunities for strategies to leverage models of connectivity among potential source and emerging regions to target surveillance and mitigation activities to reduce the risk of RVFV introduction, or contain the virus should it be introduced, into new regions.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2025

End-to-End Automated Segmentation Framework for Four-Dimensional Scanning Transmission Electron Microscopy Data

Four-dimensional scanning transmission electron microscopy (4D-STEM) is powerful for rapidly characterizing arrays of nanoparticles produced via high-throughput synthesis. However, such 4D-STEM datasets typically contain thousands of nanoparticles, each characterized by thousands of diffraction patterns spatially distributed across the nanoparticle, necessitating efficient and comprehensive analysis. We propose an end-to-end segmentation framework to automatically segment each nanoparticle into regions with distinct composition/orientation of crystal grains, using only the 4D-STEM data. Bragg disk information is extracted in a physics-informed manner from the diffraction patterns at each spatial location and combined with the real space coordinates to form feature vectors. These feature vectors are then used as inputs to a Gaussian mixture model (GMM) to segment the nanoparticle into distinct regions. We also develop two visualization tools based on the GMM outputs to infer the interface transition and the degree of superposition. Our framework comprehensively integrates machine learning tools and physics knowledge, and provides a basis for substantially compressing enormous 4D-STEM datasets, e.g., by replacing the full 4D-STEM dataset for each nanoparticle with only a single set of Bragg disk features for each distinct crystal grain identified in the nanoparticle. In this article, we demonstrate the power of our framework by presenting results for real, complex datasets.

47 OTHER INSTRUMENTATION↗

DOE OSTI2020

Optimizing automatic morphological classification of galaxies with machine learning and deep learning using Dark Energy Survey imaging

There are several supervised machine learning methods used for the application of automated morphological classification of galaxies; however, there has not yet been a clear comparison of these different methods using imaging data, or an investigation for maximizing their effectiveness. We carry out a comparison between several common machine learning methods for galaxy classification [Convolutional Neural Network (CNN), K-nearest neighbour, logistic regression, Support Vector Machine, Random Forest, and Neural Networks] by using Dark Energy Survey (DES) data combined with visual classifications from the Galaxy Zoo 1 project (GZ1). Our goal is to determine the optimal machine learning methods when using imaging data for galaxy classification. We show that CNN is the most successful method of these ten methods in our study. Using a sample of ~2800 galaxies with visual classification from GZ1, we reach an accuracy of ~0.99 for the morphological classification of ellipticals and spirals. The further investigation of the galaxies that have a different ML and visual classification but with high predicted probabilities in our CNN usually reveals the incorrect classification provided by GZ1. We further find the galaxies having a low probability of being either spirals or ellipticals are visually lenticulars (S0), demonstrating that supervised learning is able to rediscover that this class of galaxy is distinct from both ellipticals and spirals. We confirm that ~2.5 percent galaxies are misclassified by GZ1 in our study. After correcting these galaxies’ labels, we improve our CNN performance to an average accuracy of over 0.99 (accuracy of 0.994 is our best result).

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2021

Interpreting internal consistency of DES measurements

ABSTRACT Bayesian evidence ratios are widely used to quantify the statistical consistency between different experiments. However, since the evidence ratio is prior dependent, the precise translation between its value and the degree of concordance/discordance requires additional information. The most commonly adopted metric, the Jeffreys scale, can falsely suggest agreement between data sets when priors are chosen to be sufficiently wide. This work examines evidence ratios in a DES-Y1 simulated analysis, focusing on the internal consistency between weak lensing and galaxy clustering. We study two scenarios using simulated data in controlled experiments. First, we calibrate the expected evidence ratio distribution given noise realizations around the best-fitting DES-Y1 ΛCDM cosmology. Secondly, we show the behaviour of evidence ratios for noiseless fiducial data vectors simulated using a modified gravity model, which generates internal tension in the LCDM analysis. We find that the evidence ratio of noise realizations generated at all confidence levels was biased towards agreement and show, with a modified gravity model, that the choice of prior could conceal the discrepancies between weak lensing and galaxy clustering induced by prior effects in unlike cosmological models, concluding that the evidence ratio in a DES-Y1 study is, indeed, biased towards agreement. Boundary effects can also influence conclusions about the inconsistency induced by modified gravity, even in a noiseless data vector simulation.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2021

Dark energy survey internal consistency tests of the joint cosmological probes analysis with posterior predictive distributions

Beyond ΛCDM, physics or systematic errors may cause subsets of a cosmological data set to appear inconsistent when analysed assuming ΛCDM. Here, we present an application of internal consistency tests to measurements from the Dark Energy Survey Year 1 (DES Y1) joint probes analysis. Our analysis relies on computing the posterior predictive distribution (PPD) for these data under the assumption of ΛCDM. We find that the DES Y1 data have an acceptable goodness of fit to ΛCDM, with a probability of finding a worse fit by random chance of p = 0.046. Using numerical PPD tests, supplemented by graphical checks, we show that most of the data vector appears completely consistent with expectations, although we observe a small tension between large- and small-scale measurements. A small part (roughly 1.5 per cent) of the data vector shows an unusually large departure from expectations; excluding this part of the data has negligible impact on cosmological constraints, but does significantly improve the p-value to 0.10. The methodology developed here will be applied to test the consistency of DES Year 3 joint probes data sets.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

DOE OSTI2023

Sub-m s−1 upper limits from a deep HARPS-N radial-velocity search for planets orbiting HD 166620 and HD 144579

ABSTRACT Minimizing the impact of stellar variability in radial velocity (RV) measurements is a critical challenge in achieving the 10 cm s−1 precision needed to hunt for Earth twins. Since 2012, a dedicated programme has been underway with HARPS-N, to conduct a blind RV rocky planets search (RPS) around bright stars in the Northern hemisphere. Here we describe the results of a comprehensive search for planetary systems in two RPS targets, HD 166620 and HD 144579. Using wavelength-domain line-profile decorrelation vectors to mitigate the stellar activity and performing a deep search for planetary reflex motions using a trans-dimensional nested sampler, we found no significant planetary signals in the data sets of either of the stars. We validated the results via data-splitting and injection recovery tests. Additionally, we obtained the 95th percentile detection limits on the HARPS-N RVs. We found that the likelihood of finding a low-mass planet increases noticeably across a wide period range when the inherent stellar variability is corrected for using scalpelsU-vectors. We are able to detect planet signals with Msin i ≤ 1 M⊕ for orbital periods shorter than 10 d. We demonstrate that with our decorrelation technique, we are able to detect signals as low as 54 cm s−1, which brings us closer to the calibration limit of 50 cm s−1 demonstrated by HARPS-N. Therefore, we show that we can push down towards the RV precision required to find Earth analogues using high-precision radial velocity data with novel data-analysis techniques.

Anna John, A. (ORCID:0000000217156939)↗

DOE OSTI2025

Subhaloes are anisotropically distributed and aligned with the smooth matter distribution of their host haloes

ABSTRACT We investigate the distributions of subhaloes about their hosts in two suites of zoom-in N-body simulations of halo growth – one suite focused on Milky Way-Mass haloes ($\sim 10^{12} \, \mathrm{M}_{\odot }$) and another focused on cluster-mass haloes ($\sim 10^{15} \, \mathrm{M}_{\odot }$) in the Symphony simulation suite. We find, in agreement with previous work on this subject, that subhaloes are distributed anisotropically about their host haloes. In particular, the positions of subhaloes lie preferentially near the major axes of their host haloes, possibly implying that satellite galaxies will exhibit a similar alignment. Furthermore, we show that in two-dimensional projection subhaloes are more likely to be observed near the halo centre (where the central galaxy presumably resides) when the host halo is projected nearly along its major axis. This projection effect is significant. Within projected radii of a few per cent of the virial radius of the host halo, the fraction of mass in subhaloes is $\sim 175~{{\ \rm per\ cent}}$ larger for Milky Way-mass haloes and as much as $\sim 195~{{\ \rm per\ cent}}$ larger for cluster haloes when projected along the major axis as compared to the average from a random projection. This result has consequences for many applications including the interpretation of gravitational lenses. Finally, we find that the orbital angular momentum vector of subhaloes is aligned with the angular momentum vector of their host halo, indicating that a significant component of a halo’s angular momentum may be carried in its subhaloes. This has consequences for galaxy formation models which use host halo angular momentum as a proxy for galaxy momentum.

Mezini, Lorena (ORCID:0000000300053973)↗

DOE OSTI2022

The relation between quasars’ optical spectra and variability

Abstract Brightness variation is an essential feature of quasars, but its mechanism and relationship to other physical quantities are not understood well. We aimed to find the relationship between the optical variability and spectral features to reveal the regularity behind the random variation. It is known that a quasar’s Fe ii/Hβ flux ratio and equivalent width of [O iii]5007 are negatively correlated; this is called Eigenvector 1. In this work, we visualized the relationship between the position on this Eigenvector 1 (EV1) plane and how the brightness of the quasars had changed after ∼10 yr. We conducted three analyses, using a different quasar sample in each. The first analysis showed the relation between the quasars’ distributions on the EV1 plane and how much they had changed brightness, using 13438 Sloan Digital Sky Survey quasars. This result shows how brightness changes later are clearly related to the position on the EV1 plane. In the second analysis, we plotted the sources reported as “changing-look quasars” (or “changing-state quasars”) on the EV1 plane. This result shows that the position on the EV1 plane corresponds to the activity level of each source, and the bright or dim states of them are distributed on the opposite sides divided by the typical quasar distribution. In the third analysis, we examined the transition vectors on the EV1 plane using sources with multiple-epoch spectra. This result shows that the brightening and dimming sources move on a similar path and they reach a position corresponding to the opposite activity level. We also found this trend is opposite to the empirical rule that $R_{\rm {Fe\, \small {II}}}$ positively correlated with the Eddington ratio, which has been proposed based on the trends of a large number of quasars. From all these analyses, it is indicated that quasars tend to oscillate between both sides of the distribution ridge on the EV1 plane; each of them corresponds to a dim state and a bright state. This trend in optical variation suggests that significant brightness changes, such as changing-look quasars, are expected to repeat.

Astronomy & Astrophysics↗

DOE OSTI2024

Detecting damage in composites using volume decomposition analysis of tomographic data

Detection of damage in a single tow ceramic matrix composite specimen has been achieved using orthogonal decomposition of volumetric tomographic datasets collected at four tensile loads. This decomposition approach has been applied at two different length scales: (i) individual fibres and (ii) bulk volumes containing fibres and matrix material. Volumes were first decomposed to feature vectors, orders of magnitude smaller than the original volume they describe, and then comparisons between datasets at different load levels were made in feature vector space. The results show quantitative measurements of damage location, damage morphology and the relative growth of this damage with increased load when compared with a dataset with less or no damage. No prior knowledge of the dataset or training of algorithms is required for damage to be detected, it is only necessary that at least two datasets are available for comparison, e.g. from in situ or repeated scanning measurements. Results are generated on significantly shorter timescales when compared with previous automated approaches to tomography data processing. This approach has the potential to be applied to damage detection in a range of materials through comparisons of volumetric datasets from a range of measurement or computational techniques.

Middleton, Ceri A.↗

DOE OSTI2026

Two-pion contribution to the hadronic vacuum polarization with staggered quarks

We present results from the first lattice QCD calculation of the two-pion contributions to the light-quark connected vector-current correlation function obtained from staggered-quark operators. We employ the MILC Collaboration’s gauge-field ensemble with 2 + 1 + 1 flavors of highly improved staggered sea quarks at a lattice spacing of a ≈ 0.15 fm with a light sea-quark mass at its physical value. The two-pion contributions allow for a refined determination of the noisy long-distance tail of the vector-current correlation function, which we use to compute the light-quark connected contribution to hadronic vacuum polarization (HVP) with improved statistical precision. We compare our results with traditional noise-reduction techniques used in lattice QCD calculations of the light-quark connected HVP, namely, the so-called fit and bounding methods. We observe a factor of roughly 3 improvement in the statistical precision in the determination of the HVP contribution to the muon’s anomalous magnetic moment over these approaches. We also lay the group theoretical groundwork for extending this calculation to finer lattice spacings with increased numbers of staggered two-pion taste states.

Lahert, Shaun [Utah U.; Illinois U., Urbana] (ORCI↗

DOE OSTI2026

Parity-odd four-point correlation function from the DESI data release 1 luminous red galaxy sample

The parity-odd four-point function provides a unique probe of fundamental symmetries and potential new physics in the large-scale structure of the Universe. We present measurements of the parity-odd four-point function using the Dark Energy Spectroscopic Instrument (DESI) DR1 luminous red galaxy (LRG) sample and assess its detection significance. Our analysis considers both auto- and cross-correlations, using two complementary approaches to the covariance: (i) the full analytic covariance matrix applied to the uncompressed data vector, and (ii) a compressed data vector combined with a hybrid covariance matrix constructed from simulations and analytic estimates. When using the full analytic covariance matrix without corrections, we observe apparent auto-correlation signals with significance up to 4⁢𝜎. However, this excess is also consistent with a mismatch between the statistical fluctuations estimated from the simulations and those present in the real data. Our findings therefore suggest that the parity-odd signal in the current DESI DR1 LRG sample is consistent with zero. We note, however, that the low completeness of this sample may have a non-negligible impact on the detection sensitivity. Future data releases with improved completeness will be crucial for further investigation.

Hou, Jiamin [Ludwig-Maximilians-Universität; Unive↗

DOE OSTI2025

$Ξ$ 𝑐 → $Ξ$ form factors from lattice QCD with domain-wall quarks: A new piece in the puzzle of $Ξ^0_𝑐$ decay rates

We present a lattice quantum chromodynamics (QCD) determination of the vector and axial-vector form factors that describe the charm-baryon semileptonic decays Ξ 𝑐 → Ξ⁢ℓ + ⁢𝜈 ℓ . The calculation uses a domain-wall action for the up, down, and strange quarks, and an anisotropic clover action for the charm quark. We use four ensembles of gauge-field configurations generated by the RBC and UKQCD collaborations, with lattice spacings between 0.111 and 0.073 fm and pion masses ranging from 420 to 230 MeV. We present Standard Model predictions for the decay rates and branching fractions of Ξ$^0_𝑐$ → Ξ$^−_𝑐$⁢ℓ + ⁢𝜈 ℓ and Ξ$^+_𝑐$ → Ξ$^0_𝑐$⁢ℓ + ⁢𝜈 ℓ for ℓ =𝑒, 𝜇. In particular, we obtain Γ⁡(Ξ$^0_𝑐$ → Ξ − ⁢𝑒 + ⁢𝜈 𝑒 )/|𝑉 𝑐⁢𝑠 | 2 = 0.2515⁢(73) ps −1 and ℬ⁡(Ξ$^0_𝑐$ → Ξ − ⁢𝑒 +⁢ 𝜈 𝑒 ) = 3.58⁢(12)%. These values are higher than those predicted by a previous lattice calculation and substantially higher than the experimentally measured values, but consistent with expectations from approximate 𝑆⁢𝑈⁡(3) flavor symmetry.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2026

Chiral effects and Joule heating in hot and dense matter

Initial states of dense matter with nonzero electron chiral imbalance could potentially give rise to strong magnetic fields through chiral plasma instability. Previous work indicated that unless chiral chemical potential is as large as the electron vector chemical potential, the growth of magnetic fields due to the instability is washed out by chirality flipping rate enabled by electron mass. We reexamine this claim in a broader range of parameters and find that at higher temperatures the hierarchy is reversed supporting a growing magnetic field for an initial electron chiral chemical potential much smaller than the electron vector chemical potential. Further, we identify a qualitatively new effect relevant for magnetized hot and dense medium where chiral magnetic effect (CME) sourced by density fluctuation acts as a powerful source of Joule heating. Remarkably, even modest chiral chemical potentials (keV) in such environment can deposit energy densities set by the QCD scale in a relatively short time of the order of a few milliseconds or seconds. We speculate how this mechanism makes CME-driven Joule heating a potentially critical ingredient in the dynamics of turbulent density fluctuation of supernovae and neutron star mergers.

Particle astrophysics↗

DOE OSTI2026

$Ξ$ 𝑏 → $Ξ$ form factors from lattice QCD and standard-model predictions for $Ξ$ 𝑏 → $Ξ$⁢𝜇 + ⁢𝜇 − and $Ξ$ 𝑏 → $Ξ$⁢𝛾 decays

We present the first lattice QCD determination of the $Ξ$ 𝑏 → $Ξ$ vector, axial-vector, and tensor form factors, which are relevant for the theory of rare decays including $Ξ$ 𝑏 → $Ξ$⁢ℓ + ⁢ℓ − and $Ξ$ 𝑏 → $Ξ$⁢𝛾. The calculation is performed with 2+1 flavors of domain-wall fermions at three different lattice spacings and pion masses in the range from approximately 430 to 230 MeV. The bottom quark is implemented using an anisotropic clover action. Three-point functions with a wide range of source-sink separations and model averaging are used to extract the ground-state contributions. We fit the dependence of the form factors on the momentum transfer, the pion mass, and the lattice spacing using modified 𝑧 expansions that account for subthreshold branch cuts, and apply dispersive bounds and asymptotic behavior constraints to achieve controlled uncertainties in the full semileptonic kinematic region. Using our form factor results, we present standard model predictions for the $Ξ$$^{−}_{𝑏}$ → $Ξ$ − ⁢𝛾 and $Ξ$$^{−}_{𝑏}$ → $Ξ$ − ⁢𝜇 + ⁢𝜇 − branching fractions and two angular observables.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2026

Typical medium cluster approach for multibranch phonon localization

The phenomenon of Anderson localization in various disordered media has sustained significant interest over many decades. Specifically, the Anderson localization of phonons has been viewed as a potential mechanism for creating fascinating thermal transport properties in materials. However, despite extensive work, the influence of the vector nature of phonons on the Anderson localization transition has not been well explored. Here, to achieve such an understanding, we extend a recently developed phonon dynamical cluster approximation (DCA) and its typical medium variant (TMDCA) to investigate spectra and localization of multibranch phonons in the presence of pure mass disorder. We validate the new formalism against several limiting cases and exact diagonalization results. A comparison of results for the single-branch versus multibranch case shows that the vector nature of the phonons does not significantly affect the Anderson transition of phonons. The developed multibranch TMDCA formalism can be employed for studying phonon localization in real materials.

Mondal, Wasim Raja [Middle Tennessee State Univ., ↗

DOE OSTI2026

Evolution of charge density wave soft phonon modes in Pd 𝑥 ⁢ErTe 3

Here, we investigated the lattice dynamics of quasi-two-dimensional Pd-intercalated ErTe 3 in relation to its charge-density-wave (CDW) transitions by means of x-ray diffuse and meV-resolution inelastic x-ray scattering. In pristine ErTe 3 , CDW order develops at orthogonal in-plane wave vectors q$^𝑐_1$ =(0,0,0.29) (the 𝑐−CDW ) and q$^𝑎_2 $= (0.31,0,0) (the 𝑎−CDW ), with transition temperatures $𝑇^𝑐_1$ = 270K and $𝑇^𝑎_2$ = 160K, respectively. Remarkably, we observe diffuse x-ray scattering already near the higher transition temperature $𝑇^𝑐_1$ along 𝑎−CDW but at a slightly different wave vector q$^𝑎_1$ = (0.29,0,0). Inelastic x-ray scattering for Pd 0.01 ⁢ErTe 3 shows that a partial phonon softening at q$^𝑎_1$, underscoring the strong competition between ordering tendencies along the nearly equivalent in-plane axes of the orthorhombic lattice. For intercalation levels 𝑥 ≥ 0.02, the 𝑎−CDW state is suppressed. Nevertheless, a similar correlation between phonon softening and diffuse scattering persists along the [100] direction, again observed at q$^𝑎_1$ = (0.29,0,0) and $𝑇^𝑐_1$. These findings suggest that the 𝑎−CDW is fully suppressed for 𝑥 ≥ 0.02, and that the residual diffuse scattering at originates from the partial phonon softening associated with the 𝑐−CDW, reflected by the near equality of the absolute size of q$^𝑐_1$ and q$^𝑎_1$.

Maity, Avishek [Technische Univ. München, Garching↗

DOE OSTI2025

Superfluid weight of strongly inhomogeneous superconductors

In this study, we obtain the superfluid weight of strongly inhomogeneous superconductors. We find that, in general, the response of the superconductor’s pairing potential to the perturbing vector potential is essential to obtain the correct value of the superfluid weight. We consider two exemplary cases: the case when strong inhomogeneities in the pairing potential are induced by a periodic potential, and the case when superconducting vortices are induced by an external magnetic field. For both cases we show that the correction to the superfluid weight due to the response of the paring potential to the perturbing vector potential can be significant, it must be included to obtain quantitatively correct results, and that for the case when vortices are present the expression of the superfluid weight that does not include such correction returns qualitatively wrong results. The results are directly relevant for superconducting states in moiré multilayer where the almost inevitable spatial variations of the magic angle and the proximity of superconductivity to anisotropic phases induce inhomogeneities in the pairing potential, and to the efforts to optimally pin superconducting vortices to achieve large superconducting critical currents.

Bogoliubov-de Gennes equations↗

DOE OSTI2026

Semi-inclusive deep-inelastic scattering on a polarized spin-1 target. I. Cross section and spin observables

We develop the theoretical framework for semi-inclusive deep-inelastic scattering on a polarized spin-1 target and apply it to scattering on the polarized deuteron with spectator nucleon tagging. In Part I (this article) we present the general form of the semi-inclusive cross section and polarization observables for the spin-1 target. A relativistically covariant formulation in terms of four-vectors and invariant polarization parameters is employed. The target polarization is described by a spin density matrix with vector and tensor polarization. The spin and azimuthal angle dependence of the semi-inclusive cross section is derived and parametrized in terms of invariant structure functions. To validate the result, the structure functions are expressed as photon-target helicity amplitudes with known symmetry properties. The expressions presented here are kinematic (no assumptions about particle production dynamics) and valid in all regions of the deep-inelastic final state (current and target fragmentation regions). In Part II (following article), we consider deep-inelastic scattering on the polarized deuteron with spectator nucleon tagging as a special case of target fragmentation. The semi-inclusive structure functions are computed by separating nuclear and hadronic structure, and the polarization observables are explored as functions of the tagged nucleon momentum.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗