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At least 793 records · Page 44

Single-Dose Vaccination with a Hepatotropic Adeno-associated Virus Efficiently Localizes T Cell Immunity in the Liver with the Potential To Confer Rapid Protection against Hepatitis C Virus

Hepatitis C virus (HCV) is a significant contributor to the global disease burden, and development of an effective vaccine is required to eliminate HCV infections worldwide. CD4 + and CD8 + T cell immunity correlates with viral clearance in primary HCV infection, and intrahepatic CD8 + tissue-resident memory T (T RM ) cells provide lifelong and rapid protection against hepatotropic pathogens. Consequently, we aimed to develop a vaccine to elicit HCV-specific CD4 + and CD8 + T cells, including CD8 + T RM cells, in the liver, given that HCV primarily infects hepatocytes. To achieve this, we vaccinated wild-type BALB/c mice with a highly immunogenic cytolytic DNA vaccine encoding a model HCV (genotype 3a) nonstructural protein (NS5B) and a mutant perforin (pVAX-NS5B-PRF), as well as a recombinant adeno-associated virus (AAV) encoding NS5B (rAAV-NS5B). A novel fluorescent target array (FTA) was used to map immunodominant CD4 + T helper (T H ) cell and cytotoxic CD8 + T cell epitopes of NS5B in vivo , which were subsequently used to design a K d NS5B 451-459 tetramer and analyze NS5B-specific T cell responses in vaccinated mice in vivo . The data showed that intradermal prime/boost vaccination with pVAX-NS5B-PRF was effective in eliciting T H and cytotoxic CD8 + T cell responses and intrahepatic CD8 + T RM cells, but a single intravenous dose of hepatotropic rAAV-NS5B was significantly more effective. As a T-cell-based vaccine against HCV should ideally result in localized T cell responses in the liver, this study describes primary observations in the context of HCV vaccination that can be used to achieve this goal. There are currently at least 71 million individuals with chronic HCV worldwide and almost two million new infections annually. Although the advent of direct-acting antivirals (DAAs) offers highly effective therapy, considerable remaining challenges argue against reliance on DAAs for HCV elimination, including high drug cost, poorly developed health infrastructure, low screening rates, and significant reinfection rates. Accordingly, development of an effective vaccine is crucial to HCV elimination. An HCV vaccine that elicits T cell immunity in the liver will be highly protective for the following reasons: (i) T cell responses against nonstructural proteins of the virus are associated with clearance of primary infection, and (ii) long-lived liver-resident T cells alone can protect against malaria infection of hepatocytes. Thus, in this study we exploit promising vaccination platforms to highlight strategies that can be used to evoke highly functional and long-lived T cell responses in the liver for protection against HCV.

59 BASIC BIOLOGICAL SCIENCES↗

An Analysis of Input Parameters for Film-Based Flash X-Ray Radiography

Flash X-ray radiography (flash) is a commonly used diagnostic technique in dynamic experiments. An analysis of the effects of input parameters on resulting metrics of image quality can aid the experimentalist in configuring the X-ray input parameters to produce the highest quality radiograph for a given experiment. Here, a flash X-ray test bed with HS800 film and a LANEX Medium F intensifier screen was used with an L3 450 kVp pulser and Scandiflash X-ray tube for this study. Input parameters including charge voltage, source filtering, and film-pack assembly were investigated for their impact on contrast-to-noise ratio (CNR), contrast, and contrast transfer function (CTF). Using VIDAR’s NDT Pro industrial film digitizer, scanner parameters such as optical density range, pixel spacing, scan mode, and digital bit-depth were also examined for their impact on image quality metrics. The highest CNR values were found with two LANEX intensifiers and no filtering. Charge voltage had no direct impact on CNR values. LANEX screen count and filtering resulted both in direct effects on CNR and interaction effects with each other and CNR value. Uncertainty bounds for CNR comparisons and repeatability of CTF evaluations are also discussed. Finally, the film results are compared with a previous study using other detector types, specifically Carestream INDUSTREX Flex GP, Flex HR, Flex XL Blue, and HPX-DR 3543.

dynamic radiography↗

Photo annealing effect on p-doped inverted organic solar cell

We report the transient positive photo annealing effect in which over 600% boost of power conversion efficiency was observed in inverted organic photovoltaic devices (OPV) made from P3HT/PCBM by spray method, after 2 hrs of constant solar AM 1.5 irradiation at low temperature. This is opposite to usual photodegradation of OPV, and cannot be explained by thermal activation alone since the mere temperature effect could only account for 30% of the enhancement. We have investigated the temperature dependence, cell geometry, oxygen influence, and conclude that, for p-doped active layer at room temperature, the predominant mechanism is photo-desorption of O{sub 2}, which eliminates electron traps and reduces space charge screening. As temperature decreases, thermal activation and deep trap-state filling start to show noticeable effect on the enhancement of photocurrent at intermediate low temperature (T = 125 K). At very low temperature, the dominant mechanism for photo annealing is trap-filling, which significantly reduces recombination between free and trapped carriers. At all temperature, photo annealing effect depends on illumination direction from cathode or anode. We also explained the large fluctuation of photocurrent by the capture/reemit of trapped electrons from shallow electron traps of O{sub 2}{sup -} generated by photo-doping. Our study has demonstrated the dynamic process of photo-doping and photo-desorption, and shown that photo annealing in vacuum can be an efficient method to improve OPV device efficiency.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Prostaglandin potentiates 5-HT responses in stomach and ileum innervating visceral afferent sensory neurons

Highlights: • Prostaglandin E2 (PGE{sub 2}) effect was tested on visceral afferent neurons. • PGE{sub 2} did not evoke response but potentiated serotonin (5-HT) currents up to 167%. • PGE{sub 2}-induced potentiation was blocked by E-prostanoid type 4 receptors antagonist. • PGE{sub 2} effect on 5-HT response was also blocked by protein kinase A inhibitor KT5720. • Thus, PGE{sub 2} modulate visceral afferent neurons via synergistic signaling with 5-HT. - Abstract: Gastrointestinal disorder is a common symptom induced by diverse pathophysiological conditions that include food tolerance, chemotherapy, and irradiation for therapy. Prostaglandin E{sub 2} (PGE{sub 2}) level increase was often reported during gastrointestinal disorder and prostaglandin synthetase inhibitors has been used for ameliorate the symptoms. Exogenous administration of PGE{sub 2} induces gastrointestinal disorder, however, the mechanism of action is not known. Therefore, we tested PGE{sub 2} effect on visceral afferent sensory neurons of the rat. Interestingly, PGE{sub 2} itself did not evoked any response but enhanced serotonin (5-HT)-evoked currents up to 167% of the control level. The augmented 5-HT responses were completely inhibited by a 5-HT type 3 receptor antagonist, ondansetron. The PGE{sub 2}-induced potentiation were blocked by a selective E-prostanoid type4 (EP{sub 4}) receptors antagonist, L-161,982, but type1 and 2 receptor antagonist AH6809 has no effect. A membrane permeable protein kinase A (PKA) inhibitor, KT5720 also inhibited PGE{sub 2} effects. PGE{sub 2} induced 5-HT current augmentation was observed on 15% and 21% of the stomach and ileum projecting neurons, respectively. Current results suggest a synergistic signaling in visceral afferent neurons underlying gastrointestinal disorder involving PGE{sub 2} potentiation of 5-HT currents. Our findings may open a possibility for screen a new type drugs with lower side effects than currently using steroidal prostaglandin synthetase inhibitors by selectively targeting EP{sub 4} receptor/PKA pathway without interrupt prostaglandin synthesis.

60 APPLIED LIFE SCIENCES↗

An investigation of resonances in e{sup +}-H scattering embedded in Debye plasma

We carry out calculations for S-wave and P-wave resonances in e{sup +}-H scattering in weakly coupled Debye plasma in which the interaction between two charged particles is represented by a screened Coulomb potential. We employ the complex-scaling method with Hylleraas-type basis set to take correlation effects into account. In the complex-scaling treatment of the screened Coulomb potential, we first perform a Taylor series expansion for the exponential function that contains the distance r between two particles into a polynomial with various powers r{sup n}. We then make the complex scaling transformation of r→r e{sup iθ} in the expansion. The complex resonant eigenvalues are obtained by searching for stabilized points in the complex energy plane with respect to the changes of rotational angle θ and other parameters in the basis set.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Genome-wide role of codon usage on transcription and identification of potential regulators

Significance Codon usage bias, the preference for certain synonymous codons, is a feature of all genomes and plays an important role in determining gene expression levels. Surprisingly, in addition to its role in mRNA translation, codon usage was recently shown to regulate gene expression at the transcriptional level. In this study, our results suggest that codon usage influences transcription genome-wide independently of its effect on translation. By carrying out a large-scale genetic screen, we identified 18 factors participating in multiple transcriptional regulatory mechanisms involved in the codon usage-mediated transcriptional effects. Together, our study establishes a foundation for future mechanistic understanding of this gene regulatory phenomenon.

Zhao, Fangzhou↗

Observations of Short-Range Wakefield Effects in TESLA-Type Superconducting RF Cavities

The Fermilab Accelerator Science and Technology (FAST) facility has a unique configuration of a photocathode rf gun beam injecting two TESLA-type single cavities (CC1 and CC2) in series prior to the cryomodule. To investigate short-range wakefield effects, we have steered the beam to minimize the signals in the higher-order mode (HOM) detectors of CC1 and CC2 for a baseline, and then used a vertical corrector between the two cavities to steer the beam off axis at an angle into CC2. A Hamamatsu synchroscan streak camera viewing a downstream OTR screen provided an image of y-t effects within the micropulses with ~10-micron spatial resolution and 2-ps temporal resolution. At 500 pC/b, 50 b, and 4 mrad off-axis steering into CC2, we observed an ~ 100-micron head-tail centroid shift in the streak camera image y(t)-profiles. This centroid shift value is 5 times larger than the observed HOM-driven centroid oscillation within the macropulse and is consistent with a calculated short-range wakefield effect. Additional results for kick-angle compensations will be presented.

43 PARTICLE ACCELERATORS↗

Observations On Submicropulse Electron-beam Effects From Short-range Wakefields In Tesla-type Superconducting RF Cavities

aExperiments were performed at The Fermilab Accelerator Science and Technology (FAST) facility to elucidate the effects of short-range wakefields (SRWs) in TESLA-type rf cavities. FAST has a unique configuration of a photocathode rf gun beam injecting two TESLA-type single cavities (CC1 and CC2) in series prior to the cryomodule. To investigate short-range wakefield effects, we have steered the beam to minimize the signals in the higher-order mode (HOM) detectors of CC1 and CC2 for a baseline, and then selected a vertical corrector to steer the beam off axis at an angle into CC1 or CC2. A Hamamatsu synchro-scan streak camera viewing a downstream OTR screen provided an image of y-t effects within the micropulses with ~10-micron spatial resolution and 2-ps temporal resolution. At 500 pC/b, 50 b, and 2 mrad off-axis steering into CC2, we observed an ~ 100-micron head-tail centroid shift in the streak camera image y(t)-profiles. This centroid shift value is consistent wit h a calculated short-range wakefield effect using ASTRA simulations.

43 PARTICLE ACCELERATORS↗

DIRECT OBSERVATIONS OF SUBMICROPULSE ELECTRON-BEAM EFFECTS FROM SHORT-RANGE WAKEFIELDS IN TESLA-TYPE SUPERCONDUCTING RF CAVITIES

Experiments were performed at The Fermilab Accelerator Science and Technology (FAST) facility to elucidate the effects of short-range wakefields (SRWs) in TESLA-type rf cavities. FAST has a unique configuration of a photocathode rf gun beam injecting two TESLA-type single cavities (CC1 and CC2) in series prior to the cryomodule. To investigate short-range wakefield effects, we have steered the beam to minimize the signals in the higher-order mode (HOM) detectors of CC1 and CC2 for a baseline, and then used a vertical corrector between the two cavities to steer the beam off axis at an angle into CC2. A Hamamatsu synchroscan streak camera viewing a downstream OTR screen provided an image of y-t effects within the micropulses with ~10-micron spatial resolution and 2-ps temporal resolution. At 500 pC/b, 50 b, and 4 mrad off-axis steering into CC2, we observed an ~ 100-micron head-tail centroid shift in the streak camera image y(t)-profiles. This centroid shift value is 5 times l arger than the observed HOM-driven centroid oscillation within the macropulse, and it is consistent with a calculated short-range wakefield effect using ASTRA simulations.

43 PARTICLE ACCELERATORS↗

Observations of Short-Range Wadefield Effects in Tesla-Type Superconducting RF Cavities

The Fermilab Accelerator Science and Technology (FAST) facility has a unique configuration of a photocathode rf gun beam injecting two TESLA-type single cavities (CC1 and CC2) in series prior to the cryomodule. To investigate short-range wakefield effects, we have steered the beam to minimize the signals in the higher-order mode (HOM) detectors of CC1 and CC2 for a baseline, and then used a vertical corrector between the two cavities to steer the beam off axis at an angle into CC2. A Hamamatsu synchroscan streak camera viewing a downstream OTR screen provided an image of y-t effects within the micropulses with ~10-micron spatial resolution and 2-ps temporal resolution. At 500 pC/b, 50 b, and 4 mrad off-axis steering into CC2, we observed an ~ 100-micron head-tail centroid shift in the streak camera image y(t)-profiles. This centroid shift value is 5 times larger than the observed HOM-driven centroid oscillation within the macropulse and is consistent with a calculat ed short-range wakefield effect. Additional results for kick-angle compensations will be presented.

43 PARTICLE ACCELERATORS↗

QED medium effects in (anti)neutrino-nucleus and electron-nucleus scattering: Elastic scattering on nucleons

Interpretation of current and future neutrino oscillation and electron scattering experiments requires knowledge of lepton-nucleon and lepton-nucleus interactions at the percent level. We study the exchange of photons between charged particles and the nuclear medium for (anti)neutrino-, electron-, and muon-induced reactions inside a large nucleus. While quantum electrodynamics (QED)-medium contributions are formally suppressed by two powers of the electromagnetic coupling constant α when compared to the leading-order cross sections, low-energy modes and the nuclear size enhance the effect by orders of magnitude. They require a proper infrared regularization, which we implement as a screening of the electromagnetic interactions at atomic length scales or above. We provide approximate analytic expressions for the distortion of (anti)neutrino-nucleus and charged lepton-nucleus cross sections and evaluate the QED-medium effects for realistic values of the screening scale on the example of elastic scattering with nucleons inside the nucleus. We find new permille- to percent-level effects, which were not considered in either (anti)neutrino-nucleus or electron-nucleus scattering.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Efficient Broadband Terahertz Generation by Above‐Band‐Gap Excitation of the Pyroelectric ZnSnN 2

Terahertz (THz) radiation is a powerful probe of low-energy excitations in all phases of matter. However, it remains a challenge to find materials that efficiently generate THz radiation in a broad range of frequencies following optical excitation. Here, we investigate a pyroelectric material, ZnSnN 2 , and find that its above-band-gap excitation results in the efficient formation of an ultrafast photocurrent generating THz radiation. The resulting THz electric field spans a frequency range from below 1 THz to above 30 THz. The results suggest that the photocurrent is primarily driven by an ultrafast pyroelectric effect where the photo-excited carriers screen the spontaneous electric polarization of ZnSnN 2 . Strong structural disorder reduces the photocarrier lifetime significantly and, thus, enables broadband operation. ZnSnN2 shows a similar THz-emitter performance as the best spintronic THz emitters regarding bandwidth and amplitude. The study unveils the large potential of pyroelectric materials as efficient and broadband THz emitters with built-in bias fields.

36 MATERIALS SCIENCE↗

Phosphodiesterase (PDE5) inhibition assay for rapid detection of erectile dysfunction drugs and analogs in sexual enhancement products

Abstract Products marketed as dietary supplements for sexual enhancement are frequently adulterated with phosphodiesterase‐5 (PDE5) inhibitors, which are erectile dysfunction drugs or their analogs that can cause adverse health effects. Due to widespread adulteration, a rapid screening assay was developed to detect PDE5 inhibitors in adulterated products. The assay employs fluorescence detection and is based on measuring inhibition of PDE5 activity, the pharmacological mechanism shared among the adulterants. Initially, the assay reaction scheme was established and characterized, followed by analysis of 9 representative PDE5 inhibitors ( IC 50 , 0.4–4.0 ng mL –1 ), demonstrating sensitive detection in matrix‐free solutions. Next, dietary supplements serving as matrix blanks ( n = 25) were analyzed to determine matrix interference and establish a threshold value; there were no false positives. Finally, matrix blanks were spiked with 9 individual PDE5 inhibitors, along with several mixtures. All 9 adulterants were successfully detected (≤ 5 % false negative rate; n = 20) at a concentration of 1.00 mg g –1 , which is over 5 times lower than concentrations commonly encountered in adulterated products. A major distinction of the PDE5 inhibition assay is the ability to detect adulterants without prior knowledge of their chemical structures, demonstrating a broad‐based detection capability that can address a continuously evolving threat of new adulterants. The PDE5 inhibition assay can analyze over 40 samples simultaneously within 15 minutes and involves a single incubation step and simple data analysis, all of which are advantageous for combating the widespread adulteration of sex‐enhancement products.

Santillo, Michael F.↗

An expert-driven literature review of “negative” chemicals for developmental neurotoxicity (DNT) in vitro assay evaluation

To date, approximately 200 chemicals have been tested in US Environmental Protection Agency (EPA) or Organization for Economic Co-operation and Development (OECD) developmental neurotoxicity (DNT) guideline studies, leaving thousands of chemicals without traditional animal information on DNT hazard potential. To address this data gap, a battery of in vitro DNT new approach methodologies (NAMs) has been proposed. Evaluation of the performance of this battery will increase the confidence in its use to determine DNT chemical hazards. One approach to evaluate DNT NAM performance is to use a set of chemicals to evaluate sensitivity and specificity. Since a list of chemicals with potential evidence of in vivo DNT has been established, this study aims to develop a curated list of “negative” chemicals for inclusion in a “DNT NAM evaluation set”. A workflow, including a literature search followed by an expert-driven literature review, was used to systematically screen 39 chemicals for lack of DNT effect. Expert panel members evaluated the scientific robustness of relevant studies to inform chemical categorizations. Following review, the panel discussed each chemical and made categorical determinations of “Favorable”, “Not Favorable”, or “Indeterminate” reflecting acceptance, lack of suitability, or uncertainty given specific limitations and considerations, respectively. Further, the panel determined that 10, 22, and 7 chemicals met the criteria for “Favorable”, “Not Favorable”, and “Indeterminate”, for use as negatives in a DNT NAM evaluation set. Ultimately, this approach not only supports DNT NAM performance evaluation but also highlights challenges in identifying large numbers of negative DNT chemicals.

59 BASIC BIOLOGICAL SCIENCES↗

Advances in Quantum Defect Embedding Theory

Quantum defect embedding theory (QDET) is a many-body embedding method designed to describe condensed systems with strongly correlated electrons localized within a given region of space, for example spin defects in semiconductors and insulators. Although the QDET approach has been successful in predicting the electronic properties of several point defects, several limitations of the method remain. Here, in this work, we propose multiple advances to the QDET formalism. We derive a doublecounting correction that consistently treats the frequency dependence of the screened Coulomb interaction, and we illustrate the effect of including unoccupied orbitals in the active space. In addition, we propose a method to describe hybridization effects between the active space and the environment, and we compare the results of several impurity solvers, providing further insights into improving the reliability and applicability of the method. We present results for defects in diamond and for molecular qubits, including a detailed comparison with experiments.

Chen, Siyuan [University of Chicago, IL (United St↗

Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses

X-ray free-electron lasers (XFELs) enable crystallographic structure determination beyond the limitations imposed upon synchrotron measurements by radiation damage. The need for very short XFEL pulses is relieved through gating of Bragg diffraction by loss of crystalline order as damage progresses, but not if ionization events are spatially non-uniform due to underlying elemental distributions, as in biological samples. Indeed, correlated movements of iron and sulfur ions were observed in XFEL-irradiated ferredoxin microcrystals using unusually long pulses of 80 fs. Here, we report a femtosecond time-resolved X-ray pump/X-ray probe experiment on protein nanocrystals. We observe changes in the protein backbone and aromatic residues as well as disulfide bridges. Simulations show that the latter’s correlated structural dynamics are much slower than expected for the predicted high atomic charge states due to significant impact of ion caging and plasma electron screening. This indicates that dense-environment effects can strongly affect local radiation damage-induced structural dynamics.

63 RADIATION, THERMAL, AND OTHER ENVIRON. POLLUTAN↗

Interactions regulating the head-to-tail directed assembly of biological Janus rods

We can generalize the directed, head-to-tail self-assembly of microtubule filaments in the context of Janus colloidal rods. Specifically, their assembly at the tens of micron-length scale involves a careful balance between long-range electrostatic repulsion and short-range attractive forces. We show that the addition of counterion salts increases the rate of directed assembly by screening the electrostatic forces and enhancing the effectiveness of short-range interactions at the microtubule ends.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A Framework for Robust Long-Term Voltage Stability of Distribution Systems

Power injection uncertainties in distribution power grids, which are mostly induced by aggressive introduction of intermittent renewable sources, may drive the system away from normal operating regimes and potentially lead to the loss of long-term voltage stability (LTVS). Naturally, there is an ever increasing need for a tool for assessing the LTVS of a distribution system. This paper presents a fast and reliable tool for constructing inner approximations of LTVS regions in multidimensional injection space such that every point in our constructed region is guaranteed to be solvable. Numerical simulations demonstrate that our approach outperforms all existing inner approximation methods in most cases. Furthermore, the constructed regions are shown to cover substantial fractions of the true voltage stability region. In conclusion, the paper will later discuss a number of important applications of the proposed technique, including fast screening for viable injection changes, constructing an effective solvability index and rigorously certified loadability limits.

24 POWER TRANSMISSION AND DISTRIBUTION↗