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At least 775 records · Page 43

Quantitative imaging and automated fuel pin identification for passive gamma emission tomography

Compliance of member States to the Treaty on the Non-Proliferation of Nuclear Weapons is monitored through nuclear safeguards. The Passive Gamma Emission Tomography (PGET) system is a novel instrument developed within the framework of the International Atomic Energy Agency (IAEA) project JNT 1510, which included the European Commission, Finland, Hungary and Sweden. The PGET is used for the verification of spent nuclear fuel stored in water pools. Advanced image reconstruction techniques are crucial for obtaining high-quality cross-sectional images of the spent-fuel bundle to allow inspectors of the IAEA to monitor nuclear material and promptly identify its diversion. In this work, we have developed a software suite to accurately reconstruct the spent-fuel cross sectional image, automatically identify present fuel rods, and estimate their activity. Unique image reconstruction challenges are posed by the measurement of spent fuel, due to its high activity and the self-attenuation. While the former is mitigated by detector physical collimation, we implemented a linear forward model to model the detector responses to the fuel rods inside the PGET, to account for the latter. The image reconstruction is performed by solving a regularized linear inverse problem using the fast-iterative shrinkage-thresholding algorithm. We have also implemented the traditional filtered back projection (FBP) method based on the inverse Radon transform for comparison and applied both methods to reconstruct images of simulated mockup fuel assemblies. Higher image resolution and fewer reconstruction artifacts were obtained with the inverse-problem approach, with the mean-square-error reduced by 50%, and the structural-similarity improved by 200%. We then used a convolutional neural network (CNN) to automatically identify the bundle type and extract the pin locations from the images; the estimated activity levels finally being compared with the ground truth. The proposed computational methods accurately estimated the activity levels of the present pins, with an associated uncertainty of approximately 5%.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Detecting damaged buildings using real-time crowdsourced images and transfer learning

After significant earthquakes, we can see images posted on social media platforms by individuals and media agencies owing to the mass usage of smartphones these days. These images can be utilized to provide information about the shaking damage in the earthquake region both to the public and research community, and potentially to guide rescue work. This paper presents an automated way to extract the damaged buildings images after earthquakes from social media platforms such as Twitter and thus identify the particular user posts containing such images. Using transfer learning and ~ 6500 manually labelled images, we trained a deep learning model to recognize images with damaged buildings in the scene. The trained model achieved good performance when tested on newly acquired images of earthquakes at different locations and when ran in near real-time on Twitter feed after the 2020 M7.0 earthquake in Turkey. Furthermore, to better understand how the model makes decisions, we also implemented the Grad-CAM method to visualize the important regions on the images that facilitate the decision.

58 GEOSCIENCES↗

Radiation image reconstruction and uncertainty quantification using a Gaussian process prior

We propose a complete framework for Bayesian image reconstruction and uncertainty quantification based on a Gaussian process prior (GPP) to overcome limitations of maximum likelihood expectation maximization (ML-EM) image reconstruction algorithm. The prior distribution is constructed with a zero-mean Gaussian process (GP) with a choice of a covariance function, and a link function is used to map the Gaussian process to an image. Unlike many other maximum a posteriori approaches, our method offers highly interpretable hyperparamters that are selected automatically with the empirical Bayes method. Furthermore, the GP covariance function can be modified to incorporate a priori structural priors, enabling multi-modality imaging or contextual data fusion. Lastly, we illustrate that our approach lends itself to Bayesian uncertainty quantification techniques, such as the preconditioned Crank–Nicolson method and the Laplace approximation. The proposed framework is general and can be employed in most radiation image reconstruction problems, and we demonstrate it with simulated free-moving single detector radiation source imaging scenarios. We compare the reconstruction results from GPP and ML-EM, and show that the proposed method can significantly improve the image quality over ML-EM, all the while providing greater understanding of the source distribution via the uncertainty quantification capability. Furthermore, significant improvement of the image quality by incorporating a structural prior is illustrated.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Ghost imaging second harmonic generation microscopy

Second harmonic generation (SHG) microscopy is useful for visualizing interfaces and sub-structures within a wide range of materials due to the propensity for SHG to occur in non-centrosymmetric environments. However, since SHG is a nonlinear process generally necessitating small focal sizes for higher peak powers, a raster scanning approach is usually needed to build an SHG image over a significant sample size. While raster scanning is effective, there is a cost in terms of the time needed to acquire the image and, also, some materials cannot withstand the higher optical intensities within the small focal volume. As such, we describe a SHG microscopy approach based on ghost imaging (GI), which enables imaging data to be collected in parallel rather than sequentially as in raster scanning techniques. We experimentally demonstrate the approach and combine GI-SHG with compressive sensing to make further substantial gains in reducing the amount of sampling required for image reconstruction. Furthermore, GI-SHG is shown to have significant advantages for imaging in highly scattering environments, partly because GI is a background-free approach requiring spatial correlations between photons that travel two paths, with one path entirely devoid of sample interaction. This basic property of GI means that only the photons that travel unimpeded through the sample preserve the spatial correlations needed to reconstruct the image, while more scattered photons do not contribute to the overall GI signal. Finally, we compare the image quality and sampling properties of three different reconstruction algorithms used for compressive sensing.

47 OTHER INSTRUMENTATION↗

Particle image velocimetry analysis with simultaneous uncertainty quantification using Bayesian neural networks

Particle image velocimetry (PIV) is an effective tool in experimental fluid mechanics for extracting flow fields from images. Recently, convolutional neural networks (CNNs) have been used to perform PIV analysis with accuracy on par with classical methods. Here we extend the use of CNNs to analyze PIV data while providing simultaneous uncertainty quantification on the inferred flow field. The method we apply in this paper is a Bayesian convolutional neural network (BCNN) which learns distributions of the CNN weights through variational Bayes. In order to demonstrate the utility of BCNNs for the PIV task, we compare the performance of three distinct BCNN models with simple architectures. The first network estimates flow velocity from image interrogation regions only. Our second model learns to infer velocity from both the image interrogation regions and interrogation region cross-correlation maps. Finally, our best performing network infers velocities from interrogation region cross-correlation maps only. We find that BCNNs using interrogation region cross-correlation maps as inputs perform better than those using interrogation windows only as inputs and discuss reasons why this may be the case. Additionally, we test the best performing BCNN on a full synthetic test image pair and a real image pair from the 1st International PIV Challenge. We show that ~98% of true particle displacements from the full synthetic image pair can be captured within the BCNN's 95% confidence intervals, and that the BCNN's performance on the real image pair is quantitatively similar to that of algorithms tested in the 1st International PIV Challenge. Finally, we show that BCNNs can be generalized to be used with multi-pass PIV algorithms with a moderate loss in accuracy, which may be overcome by future work on finetuning and training schemes. So to our knowledge, this is the first use of Bayesian neural networks to perform PIV.

47 OTHER INSTRUMENTATION↗

Imaging and dosimetric characteristics of 67 Cu

In recent years the use of beta-emitting radiopharmaceuticals for cancer therapy has expanded rapidly following development of therapeutics for neuroendocrine tumors, prostate cancer, and other oncologic malignancies. One emerging beta-emitting radioisotope of interest for therapy is 67 Cu (t 1/2 : 2.6 d) due to its chemical equivalency with the widely-established positron-emitting isotope 64 Cu (t 1/2 : 12.7 h). Here we evaluate both the imaging and dosimetric characteristics of 67 Cu, as well as producing the first report of SPECT/CT imaging using 67 Cu. To this end, 67 Cu was produced by photon-induced reactions on isotopically-enriched 68 Zn at the Low-Energy Accelerator Facility (LEAF) of Argonne National Laboratory, followed by bulk separation of metallic 68 Zn by sublimation and radiochemical purification by column chromatography. Gamma spectrometry was performed by efficiency-calibrated high-purity germanium (HPGe) analysis to verify absolute activity calibration and establish radionuclidic purity. Absolute activity measurements corroborated manufacturer-recommended dose-calibrator settings and no radionuclidic impurities were observed. Using the Clinical Trials Network anthropomorphic chest phantom, SPECT/CT images were acquired. Medium Energy (ME) SPECT collimation was found to provide the best image quality from the primary 185 keV gamma emission of 67 Cu. Reconstructed images of 67 Cu were similar in quality to images acquired using 177 Lu. Recovery coefficients were calculated and compared against quantitative images of 99m Tc, 177 Lu, and 64 Cu within the same anthropomorphic chest phantom. Production and clinical imaging of 67 Cu appears feasible, and future studies investigating the therapeutic efficacy of 67 Cu-based radiopharmaceuticals are warranted.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Deep Multimodal Networks for M-type Star Classification with Paired Spectrum and Photometric Image

Abstract Traditional stellar classification methods include spectral and photometric classification separately. Although satisfactory results can be achieved, the accuracy could be improved. In this paper, we pioneer a novel approach to deeply fuse the spectra and photometric images of the sources in an advanced multimodal network to enhance the model’s discriminatory ability. We use Transformer as the fusion module and apply a spectrum–image contrastive loss function to enhance the consistency of the spectrum and photometric image of the same source in two different feature spaces. We perform M-type stellar subtype classification on two data sets with high and low signal-to-noise ratio (S/N) spectra and corresponding photometric images, and the F1-score achieves 95.65% and 90.84%, respectively. In our experiments, we prove that our model effectively utilizes the information from photometric images and is more accurate than advanced spectrum and photometric image classifiers. Our contributions can be summarized as follows: (1) We propose an innovative idea for stellar classification that allows the model to simultaneously consider information from spectra and photometric images. (2) We discover the challenge of fusing low-S/N spectra and photometric images in the Transformer and provide a solution. (3) The effectiveness of Transformer for spectral classification is discussed for the first time and will inspire more Transformer-based spectral classification models.

Astronomy & Astrophysics↗

Identifying Outliers in AI-based Image Compression

Image compression using artificial intelligence (AI) is becoming increasingly prevalent across various fields, including scientific research. Scientific instruments can generate hundreds of images per second, and effectively compressing these images with high compression ratios is crucial for facilitating scientific discoveries. However, automatically detecting outlier cases, where compression may not have succeeded or where interesting scientific phenomena are present, poses a significant challenge. To address this, we have developed a methodology based on unsupervised machine learning techniques for detecting outlier compressed images. This methodology utilizes metrics such as peak signal-to-noise ratio (PSNR), structural similarity index measure (SSIM), structural texture similarity index measure (STSIM), and deep image and structural texture similarity index (DISTS). We have evaluated our methodology on several unlabeled datasets, including microscopy and x-ray images, and have successfully identified multiple outlier images using our proposed approach. Furthermore, our approach has enabled us to identify image semantics that are valuable for post-experiment analysis by scientists.

Data Analysis↗

Exploring Capability of Multimodal Foundation Model for Image-based Fault Detection of Photovoltaic Modules

Multimodal Foundation Model (MFM), like ChatGPT and Gemini, have emerged as powerful tools for their exceptional natural language processing capabilities and their emerging potential in image analysis. This paper investigates the application of MFMs for photovoltaic (PV) fault detection through image analysis, focusing on ChatGPT 4.0 and Gemini 1.5 Pro. Three types of PV images and the corresponding common PV faults are detected: bird droppings using visible images, cell cracks via electroluminescence (EL) images, and hotspots using infrared (IR) images. Among the two models, Gemini 1.5 Pro demonstrated superior performance, achieving near-perfect results with an average F1 score of 0.97, consistently outperforming ChatGPT 4.0 in accuracy and reliability. Unlike traditional machine learning (ML) models, MFMs can operate in a zero shot manner that does not require additional training by the user, and the input images are not limited by size, angle, scope, or PV technology. The strong adaptability and user-friendliness make MFM a promising tool for analyzing PV images and advancing health monitoring for PV modules.

Li, Baojie↗

Deciphering Discrepancies: A Comparative Analysis of Docker Image Security

As the use of microservices continues to grow and become a foundational approach to architecting software solutions, ensuring the security of microservices is paramount. Docker images have emerged as the predominant solution to containerize microservices–and thus, Docker images are becoming a large attack surface. Thus, reducing vulnerabilities in Docker images will reduce microservice cyberattacks. A common way to find vulnerabilities in Docker images employs static analysis tools like Trivy and Grype. However, these tools frequently generate disparate vulnerability reports when analyzing the same Docker image, thus causing uncertainty in tool selection. We collected 927 Docker images, analyzed them with Trivy and Grype, and compared the vulnerabilities reported in each image. Among the 865 images found to have vulnerabilities, Trivy and Grype disagreed on both the number of vulnerabilities and the vulnerability IDs found therein. Since both tools interface with external vulnerability databases, some discrepancies can be attributed to how the tools interface with these external resources. The external vulnerability databases partially overlap and frequently contradict one another, thereby creating challenges for static analysis tool developers and end users alike. This New Ideas and Emerging Results (NIER) study contains new and critical information that practitioners need for selecting and using static analysis tools–given that increases in the use of Docker technologies means increases in the size of the attack surfaces.

Boles, Brittany [Montana State University]↗

Toward Large-Scale Image Segmentation on Summit

Semantic segmentation of images is an important computer vision task that emerges in a variety of application domains such as medical imaging, robotic vision and autonomous vehicles to name a few. While these domain-specific image analysis tasks involve relatively small image sizes (~ 10 2 × 10 2 ), there are many applications that need to train machine learning models on image data with extents that are orders of magnitude larger (~10 4 × 10 4 ). Training deep neural network (DNN) models on large extent images is extremely memory-intensive and often exceeds the memory limitations of a single graphical processing unit, a hardware accelerator of choice for computer vision workloads. Here, an efficient, sample parallel approach to train U-Net models on large extent image data sets is presented. Its advantages and limitations are analyzed and near-linear strong-scaling speedup demonstrated on 256 nodes (1536 GPUs) of the Summit supercomputer. Using a single node of the Summit supercomputer, an early evaluation of a recently released model parallel framework called GPipe is demonstrated to deliver ~ 2X speedup in executing a U-Net model with an order of magnitude larger number of trainable parameters than reported before. Performance bottlenecks for pipelined training of U-Net models are identified and mitigation strategies to improve the speedups are discussed. Together, these results open up the possibility of combining both approaches into a unified scalable pipelined and data parallel algorithm to efficiently train U-Net models with very large receptive fields on data sets of ultra-large extent images.

Seal, Sudip↗

Scaling Resolution of Gigapixel Whole Slide Images Using Spatial Decomposition on Convolutional Neural Networks

Gigapixel images are prevalent in scientific domains ranging from remote sensing, and satellite imagery to microscopy, etc. However, training a deep learning model at the natural resolution of those images has been a challenge in terms of both, overcoming the resource limit (e.g. HBM memory constraints), as well as scaling up to a large number of GPUs. In this paper, we trained Residual neural Networks (ResNet) on 22,528 x 22,528-pixel size images using a distributed spatial decomposition method on 2,304 GPUs on the Summit Supercomputer. We applied our method on a Whole Slide Imaging (WSI) dataset from The Cancer Genome Atlas (TCGA) database. WSI images can be in the size of 100,000 x 100,000 pixels or even larger, and in this work we studied the effect of image resolution on a classification task, while achieving state-of-the-art AUC scores. Moreover, our approach doesn't need pixel-level labels, since we're avoiding patching from the WSI images completely, while adding the capability of training arbitrary large-size images. This is achieved through a distributed spatial decomposition method, by leveraging the non-block fat-tree interconnect network of the Summit architecture, which enabled GPU-to-GPU direct communication. Finally, detailed performance analysis results are shown, as well as a comparison with a data-parallel approach when possible.

Tsaris, Aristeidis (aris)↗

Reflection Optical Imaging to Study Oxygen Evolution Reactions

Discovery of high-efficiency water-splitting catalysts is critical for clean hydrogen fuel generation. Quantitative and reliable chemical imaging methods can play a crucial role in providing critical catalyst efficiency information for materials development and screening. Here, we developed a reflection optical imaging method to map the performance of transition metal oxide catalysts for oxygen evolution reaction (OER). The generated high concentration of oxygen in the electrolyte will decrease the refractive index of the solutions near the electrode and change the reflectivity of optical images. We successfully imaged and measured the OER on cobalt oxide, and the localized current density and overpotential distribution maps have been extracted. The oxidation and reduction of cobalt oxide can be imaged with our reflection optical imaging method as well. These maps showed that the catalytic activities are quite different at different locations, and some regions showed much higher activities. This is due to the non-uniformity created by the catalyst synthesis process and demonstrates the importance of using the optical imaging method to map the localized catalytic efficiency. In addition, the NiFe alloy’s OER catalytic activities have been studied as well. The proposed reflection optical imaging method could find many applications in catalyst activity measurement and screening.

Electrochemistry↗

Live cell imaging of cellular dynamics in poplar wood using computational cannula microscopy

This study presents significant advancements in computational cannula microscopy for live imaging of cellular dynamics in poplar wood tissues. Leveraging machine-learning models such as pix2pix for image reconstruction, we achieved high-resolution imaging with a field of view of 55µm using a 50µm-core diameter probe. Our method allows for real-time image reconstruction at 0.29 s per frame with a mean absolute error of 0.07. We successfully captured cellular-level dynamics in vivo , demonstrating morphological changes at resolutions as small as 3µm. We implemented two types of probabilistic neural network models to quantify confidence levels in the reconstructed images. This approach facilitates context-aware, human-in-the-loop analysis, which is crucial for in vivo imaging where ground-truth data is unavailable. Using this approach we demonstrated deep in vivo computational imaging of living plant tissue with high confidence (disagreement score ⪅0.2). This work addresses the challenges of imaging live plant tissues, offering a practical and minimally invasive tool for plant biologists.

Ingold, Alexander (ORCID:0009000752380016)↗

3D quantum ghost imaging microscope

Quantum ghost imaging uses quantum-entangled photons to generate a two-dimensional image with only a bucket detector at the sample. Here we expand on this approach to generate a three-dimensional image without scanning. A quantum-entangled light source directly links information between a pair of 2D sensors, one of which captures a standard image from one perspective and a second sensor which captures a ghost image from a perpendicular perspective. By correlating the spatial information from the two detectors for each photon pair, we obtain three dimensions of spatial information (x, y, and z) for each scattered photon. We demonstrate that this system can study microscopic environments by imaging scattering from metallic nanoparticle clusters. This approach has the potential to greatly reduce the flux of light required to obtain a 3D image of a biological sample and thereby extend the number of images that can be obtained before photodamaging the sample.

Eshun, Audrey [Lawrence Livermore National Laborat↗

Template size and proper overlap detection in Laser Confocal Microscope (LCM) images [Slides]

The LCM has been used to interrogate the inside of hazardous material 3013 storage containers resulting in many LCM images. Joining these images together to create one large image allows one to see features, potential cracking and potential pitting, that extend from one image to another. The images have been found to cover some (5% – 10% at the edges) of the same sample area. This overlap appears to change slightly from image to image so that a global overlap value does not solve the stitching problem. It will be necessary to determine the proper overlap for two adjacent, horizontal or vertical, images. The methodology presented here shows how to estimate the overlap.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Ultra-compact Imaging Technology (CRADA Final Report)

As part of the Cyclotron Road program, Synopic (formerly FlatCam LLC) sought to investigate the benefits of its depth-sensitive imaging techniques. The basic principle involved using a thin mask specially designed to encode light reaching a sensor, in conjunction with optimized computational algorithms, in such a manner that allowed for both miniaturization of imaging systems and improved computation toward high resolution, three-dimensional imaging. By thoroughly exploring the resolution, mask/optical design, and algorithmic capabilities of our depth sensitive technology, we expand the potential applications for (but not limited to) medical, consumer and industrial purposes. The project aimed to develop new imaging systems by building on previous work and using 1) materials capable of modulating and 2) sensors capable of measuring visible and longer wavelengths. Preliminary research was conducted to design, fabricate and characterize imaging systems with the goal of improving resolution, enhancing single capture, three-dimensional imaging, and extending depth of field of captured images. The primary goal was to determine whether adapting the depth-sensitive imaging system is feasible, and early results are promising.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗