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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 775 records · Page 43
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Affinity-matured homotypic interactions induce spectrum of PfCSP structures that influence protection from malaria infection

The generation of high-quality antibody responses to Plasmodium falciparum (Pf) circumsporozoite protein (PfCSP), the primary surface antigen of Pf sporozoites, is paramount to the development of an effective malaria vaccine. Here we present an in-depth structural and functional analysis of a panel of potent antibodies encoded by the immunoglobulin heavy chain variable (IGHV) gene IGHV3-33, which is among the most prevalent and potent antibody families induced in the anti-PfCSP immune response and targets the Asn-Ala-Asn-Pro (NANP) repeat region. Cryo-electron microscopy (cryo-EM) reveals a remarkable spectrum of helical antibody-PfCSP structures stabilized by homotypic interactions between tightly packed fragments antigen binding (Fabs), many of which correlate with somatic hypermutation. We demonstrate a key role of these mutated homotypic contacts for high avidity binding to PfCSP and in protection from Pf malaria infection. Together, these data emphasize the importance of anti-homotypic affinity maturation in the frequent selection of IGHV3–33 antibodies and highlight key features underlying the potent protection of this antibody family.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2021

Structural analysis of the catalytic domain of Artemis endonuclease/SNM1C reveals distinct structural features

The endonuclease Artemis is responsible for opening DNA hairpins during V(D)J recombination and for processing a subset of pathological DNA double-strand breaks. Artemis is an attractive target for the development of therapeutics to manage various B cell and T cell tumors, because failure to open DNA hairpins and accumulation of chromosomal breaks may reduce the proliferation and viability of pre-T and pre-B cell derivatives. However, structure-based drug discovery of specific Artemis inhibitors has been hampered by a lack of crystal structures. Here, we report the structure of the catalytic domain of recombinant human Artemis. The catalytic domain displayed a polypeptide fold similar overall to those of other members in the DNA cross-link repair gene SNM1 family and in mRNA 3'-end-processing endonuclease CPSF-73, containing metallo-β-lactamase and β-CASP domains and a cluster of conserved histidine and aspartate residues capable of binding two metal atoms in the catalytic site. As in SNM1A, only one zinc ion was located in the Artemis active site. However, Artemis displayed several unique features. Unlike in other members of this enzyme class, a second zinc ion was present in the β-CASP domain that leads to structural reorientation of the putative DNA-binding surface and extends the substrate-binding pocket to a new pocket, pocket III. Moreover, the substrate-binding surface exhibited a dominant and extensive positive charge distribution compared with that in the structures of SNM1A and SNM1B, presumably because of the structurally distinct DNA substrate of Artemis. The structural features identified here may provide opportunities for designing selective Artemis inhibitors.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

First application of a liquid argon time projection chamber for the search for intranuclear neutron-antineutron transitions and annihilation in 40 Ar using the MicroBooNE detector

We present a novel methodology to search for intranuclear neutron-antineutron transition (n→n̅) followed by n̅-nucleon annihilation within an 40 Ar nucleus, using the MicroBooNE liquid argon time projection chamber (LArTPC) detector. A discovery of n→n̅ transition or a new best limit on the lifetime of this process would either constitute physics beyond the Standard Model or greatly constrain theories of baryogenesis, respectively. The approach presented in this paper makes use of deep learning methods to select n→n̅ events based on their unique features and differentiate them from cosmogenic backgrounds. The achieved signal and background efficiencies are (70.22 ± 6.04)% and (0.0020 ± 0.0003)%, respectively. A demonstration of a search is performed with a data set corresponding to an exposure of 3.32 ×10 26 neutron-years, and where the background rate is constrained through direct measurement, assuming the presence of a negligible signal. With this approach, no excess of events over the background prediction is observed, setting a demonstrative lower bound on the n→n̅ lifetime in 40 Ar of τ m ≳ 1.1×10 26 years, and on the free n→n̅ transition time of τ n→n̅ ≳ 2.6×10 5 s, each at the 90% confidence level. This analysis represents a first-ever proof-of-principle demonstration of the ability to search for this rare process in LArTPCs with high efficiency and low background.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2022

Region-adaptive, Error-controlled Scientific Data Compression using Multilevel Decomposition

The increase of computer processing speed is significantly outpacing improvements in network and storage bandwidth, leading to the big data challenge in modern science, where scientific applications can quickly generate much more data than that can be transferred and stored. As a result, big scientific data must be reduced by a few orders of magnitude while the accuracy of the reduced data needs to be guaranteed for further scientific explorations. Moreover, scientists are often interested in some specific spatial/temporal regions in their data, where higher accuracy is required. The locations of the regions requiring high accuracy can sometimes be prescribed based on application knowledge, while other times they must be estimated based on general spatial/temporal variation. In this paper, we develop a novel multilevel approach which allows users to impose region-wise compression error bounds. Our method utilizes the byproduct of a multilevel compressor to detect regions where details are rich and we provide the theoretical underpinning for region-wise error control. With spatially varying precision preservation, our approach can achieve significantly higher compression ratios than single-error bounded compression approaches and control errors in the regions of interest.We conduct the evaluations on two climate use cases – one targeting small-scale, node features and the other focusing on long, areal features. For both use cases, the locations of the features were unknown ahead of the compression. By selecting approximately 16% of the data based on multi-scale spatial variations and compressing those regions with smaller error tolerances than the rest, our approach improves the accuracy of post-analysis by approximately 2 × compared to single-error-bounded compression at the same compression ratio. Using the same error bound for the region of interest, our approach can achieve an increase of more than 50% in overall compression ratio.

Gong, Qian↗
DOE OSTI2022

Quantifying shifts in natural selection on codon usage between protein regions: a population genetics approach

Codon usage bias (CUB), the non-uniform usage of synonymous codons, occurs across all domains of life. Adaptive CUB is hypothesized to result from various selective pressures, including selection for efficient ribosome elongation, accurate translation, mRNA secondary structure, and/or protein folding. Given the critical link between protein folding and protein function, numerous studies have analyzed the relationship between codon usage and protein structure. The results from these studies have often been contradictory, likely reflecting the differing methods used for measuring codon usage and the failure to appropriately control for confounding factors, such as differences in amino acid usage between protein structures and changes in the frequency of different structures with gene expression. Here we take an explicit population genetics approach to quantify codon-specific shifts in natural selection related to protein structure in S. cerevisiae and E. coli. Unlike other metrics of codon usage, our approach explicitly separates the effects of natural selection, scaled by gene expression, and mutation bias while naturally accounting for a region’s amino acid usage. Bayesian model comparisons suggest selection on codon usage varies only slightly between helix, sheet, and coil secondary structures and, similarly, between structured and intrinsically-disordered regions. Similarly, in contrast to previous findings, we find selection on codon usage only varies slightly at the termini of helices in E. coli. Using simulated data, we show this previous work indicating “non-optimal” codons are enriched at the beginning of helices in S. cerevisiae was due to failure to control for various confounding factors (e.g. amino acid biases, gene expression, etc.), and rather than selection to modulate cotranslational folding. Our results reveal a weak relationship between codon usage and protein structure, indicating that differences in selection on codon usage between structures are slight. In addition to the magnitude of differences in selection between protein structures being slight, the observed shifts appear to be idiosyncratic and largely codon-specific rather than systematic reversals in the nature of selection. Overall, our work demonstrates the statistical power and benefits of studying selective shifts on codon usage or other genomic features from an explicitly evolutionary approach. Limitations of this approach and future potential research avenues are discussed.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1963

The brayton cycle for space power

This paper reviews the basic features of the Brayton cycle and discusses the selection of such cycle parameters as working fluid, pressure, and temperature. System performance, weight, and reliability characteristics are then considered in order to determine the suitability of this type of system for the intended space applications. It is shown that the Brayton cycle can be considered suitable for low-power solar and intermediate-power nuclear applications where low specific weight is not a critical requirement. To achieve the low specific weights required for electrical propulsion missions, turbine-inlet temperatures in the 3000 R region at power levels in the 500–1000 kw range appear to be necessary.

ELECTRIC PROPULSION↗
NASA NTRS1974

Stagnation and downstream viscous shock-layer solutions with radiation and coupled ablation injection

This paper describes a rigorous viscous shock-layer analysis for investigating high energy equilibrium flow fields about blunt axisymmetric bodies. The analysis includes radiation transfer, mass injection, diffusion, and viscous effects. Radiation transfer is calculated with a nongray radiation model that accounts for line and continuum radiation. The analysis can treat all levels of blowing for both stagnation and downstream flow. Results are presented for selected earth entry conditions that demonstrate the essential features of this analysis. Particular emphasis is given to the effects of mass injection on stagnation and downstream flow. Results for both specified and coupled ablation injection are presented.

Moss, J. N.↗
NASA NTRS1975

Two-stage, low noise advanced technology fan. Volume 2: Aerodynamic data

Aerodynamic data from static tests of a two-stage advanced technology fan designed to minimize noise are presented. Fan design conditions include delivery of 209.1kg/sec/sq m (42.85 lbm/sec/sq ft) specific corrected flow at an overall pressure ratio of 1.9 and an adiabatic efficiency of 85.3 percent. The 0.836m (2.74ft) diameter first stage rotor has a hub/tip ratio of 0.4 and 365.8m/sec (1200ft/sec) design tip speed. In addition to the moderate tip speed and pressure rise per stage, other noise control design features involve widely spaced blade rows and proper selection of blade-vane ratios. Aerodynamic data are presented for tests with unifrom and with hub and tip radially distorted inlet flow. Aerodynamic data are also presented for tests of this fan with acoustic treatments, including acoustically treated casing walls, a flowpath exit acoustic ring, and a translating centerbody sonic inlet device. A complete tabulation of the overall performance data, the blade element data, and the power spectral density information relating to turbulence levels generated by the sonic inlet obtained during these tests is included. For vol. 1, see N74-33789.

Harley, K. G.↗
NASA NTRS1977

The capuchin monkey as a flight candidate

The highly evolved nervous system and associated complex behavioral capabilities of the nonhuman primates make them good candidates for certain studies in the space environment since deleterious changes in these more complex aspects of a biological status can only be demonstrated by species which share such highly evolved features with man. Important assets which urge the selection of the capuchin monkey for space experiments include his small size, high intelligence, relative disease resistance, nutritional requirements, and lower volume life support systems. The species is particularly suited for experiments on the nervous system or on process under neural control because of the similarity of capuchin and human blood chemistry profiles and endocrine systems involved in the maintenance of homeostasis and vasomotor tone.

Winget, C. M.↗
NASA NTRS1980

Road map to adaptive optimal control

A building block control structure leading toward adaptive, optimal control for jet engines is developed. This approach simplifies the addition of new features and allows for easier checkout of the control by providing a baseline system for comparison. Also, it is possible to eliminate certain features that do not have payoff by being selective in the addition of new building blocks to be added to the baseline system. The minimum risk approach specifically addresses the need for active identification of the plant to be controlled in real time and real time optimization of the control for the identified plant.

Boyer, R.↗
NASA NTRS1981

Computer code for intraply hybrid composite design

A computer program is described for intraply hybrid composite design (INHYD). The program includes several composite micromechanics theories, intraply hybrid composite theories, and a hygrothermomechanical theory. These theories provide INHYD with considerable flexibility and capability which the user can exercise through several available options. Key features and capabilities of INHYD are illustrated through selected samples.

Chamis, C. C.↗
NASA NTRS1981

Computer code for intraply hybrid composite design

A computer program has been developed and is described herein for intraply hybrid composite design (INHYD). The program includes several composite micromechanics theories, intraply hybrid composite theories and a hygrothermomechanical theory. These theories provide INHYD with considerable flexibility and capability which the user can exercise through several available options. Key features and capabilities of INHYD are illustrated through selected samples.

Chamis, C. C.↗
NASA NTRS1984

Model for optimal parallax in stereo radar imagery

Simulated stereo radar imagery is used to investigate parameters for a spaceborne imaging radar. Incidence angles ranging from small to intermediate to large are used with three digital terrain model areas which are representative of relatively flat, moderately rough, and mountaneous terrain. The simulated radar imagery was evaluated by interpreters for ease of stereo perception and information content, and rank ordered within each class of terrain. The interpreter's results are analyzed for trends between the height of a feature and either parallax or vertical exaggeration for a stereo pair. A model is developed which predicts the amount of parallax (or vertical exaggeration) an interpreter would desire for best stereo perception of a feature of a specific height. Results indicate the selection of angle of incidence and stereo intersection angle depend upon the relief of the terrain. Examples of the simulated stereo imagery are presented for a candidate spaceborne imaging radar having four selectable angles of incidence.

Pisaruck, M. A.↗
NASA NTRS1983

An analysis of simulated stereo radar imagery

Simulated stereo radar imagery is used to investigate parameters for a spaceborne imaging radar. Incidence angles ranging from small to intermediate to large are used with three digital terrain model areas which are representative of relatively flat, moderately rough, and mountainous terrain. The simulated radar imagery was evaluated by interpreters for ease of stereo perception and information content, and rank order within each class of terrain. The interpreter's results are analyzed for trends between the height of a feature and either parallax or vertical exaggeration for a stereo pair. A model is developed which predicts the amount of parallax (or vertical exaggeration) an interpreter would desire for best stereo perception of a feature of a specific height. Results indicate the selection of angle of incidence and stereo intersection angle depend upon the relative relief of the terrain. Examples of the simulated stereo imagery are presented for a candidate spaceborne imaging radar having four selectable angles of incidence.

Pisaruck, M. A.↗
NASA NTRS1986

Noise-driven sidebranching in the boundary-layer model of dendritic solidification

In the context of local models of solidification, it is suggested that the sidebranching which appears to be a characteristic feature of dendritic processes may be generated by selective amplification of noise near the tip and that, under some circumstances, thermal fluctuations may be strong enough to explain the observed effects. This proposal is discussed based on the two-dimensional boundary-layer model with kinetic crystalline anisotropy. Experimental methods to distinguish this stochastic process from a deterministic, dynamical sidebranching mechanism are suggested, including the possibility of space-based experiments.

Pieters, R.↗
NASA NTRS1986

Planetary astronomy

Comets were studied during their relatively quiescent phases at large distances from the sun. This program, has resulted in a variety of CCD images of comets in several visible and near-IR bands selected to sample the continuum, rather than emission features. The most extensive dataset was obtained for P/Halley during January 1985 (plus scattered earlier data), near the time the comet turned on. The data were reduced in a preliminary fashion. Other comets predicted to be relatively inactive (including Neujmin 1 and Arend-Rigaux) were most active than expected. P/Gehrels 3 was also observed.

Chapman, C. R.↗
NASA NTRS1988

Multimission modular spacecraft (MMS)

This paper discusses the design requirements for the low-cost standard spacecraft development which has come to be known as the Multimission Modular Spacecraft (MMS). The paper presents the wide range of launch configurations of the MMS users, the population of programs using the MMS, and the cost effectiveness of the MMS concept. The paper addresses the in-orbit serviceability of the design as demonstrated by the successful SMM repair, and the recent selection of MMS for the Explorer Platform, which features in-orbit payload exchanges.

Falkenhayn, Edward, Jr.↗