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At least 775 records · Page 43

Transcripts and genomic intervals associated with variation in metabolite abundance in maize leaves under field conditions

Abstract Plants exhibit extensive environment-dependent intraspecific metabolic variation, which likely plays a role in determining variation in whole plant phenotypes. However, much of the work seeking to use natural variation to link genes and transcript’s impacts on plant metabolism has employed data from controlled environments. Here, we generated and analyzed data on the variation in the abundance of 26 metabolites across 660 maize inbred lines under field conditions. We employ these data and previously published transcript and whole plant phenotype data reported for the same field experiment to identify both genomic intervals (through genome-wide association studies (GWAS)) and transcripts (using both transcriptome-wide association studies (TWAS) and an explainable artificial intelligence (AI) approach based on random forest (RF)) associated with variation in metabolite abundance. Both genome-wide association and random forest-based methods identified substantial numbers of significant associations including genes with plausible links to the metabolites they are associated with. In contrast, the transcriptome-wide association identified only six significant associations. In three cases, genetic markers associated with metabolic variation in our study colocalized with markers linked to variation in non-metabolic traits scored in the same experiment. We speculate that the poor performance of transcriptome-wide association studies in identifying transcript-metabolite associations may reflect a high prevalence of non-linear interactions between transcripts and metabolites and/or a bias towards rare transcripts playing a large role in determining intraspecific metabolic variation.

Mathivanan, Ramesh Kanna↗

Applying Waveform Correlation to Reduce Seismic Analyst Workload Due to Repeating Mining Blasts

Agencies that monitor for underground nuclear tests are interested in techniques that automatically characterize mining blasts to reduce the human analyst effort required to produce high–quality event bulletins. Waveform correlation is effective in finding similar waveforms from repeating seismic events, including mining blasts. We report the results of an experiment to detect and identify mining blasts for two regions, Wyoming (U.S.A.) and Scandinavia, using waveform templates recorded by multiple International Monitoring System stations of the Preparatory Commission for the Comprehensive Nuclear–Test–Ban Treaty Organization (CTBTO PrepCom) for up to 10 yr prior to the time of interest. We discuss approaches for template selection, threshold setting, and event detection that are specialized for characterizing mining blasts using a sparse, global network. We apply the approaches to one week of data for each of the two regions to evaluate the potential for establishing a set of standards for waveform correlation processing of mining blasts that can be generally applied to operational monitoring systems with a sparse network. Here, we compare candidate events detected with our processing methods to the Reviewed Event Bulletin of the International Data Centre to assess potential reduction in analyst workload.

58 GEOSCIENCES↗

Transverse Beam Emittance Measurement by Undulator Radiation Power Noise

Generally, turn-to-turn power fluctuations of incoherent spontaneous synchrotron radiation in a storage ring depend on the 6D phase-space distribution of the electron bunch. In some cases, if only one parameter of the distribution is unknown, this parameter can be determined from the measured magnitude of these power fluctuations. In this contribution, we report the results of our experiment at the Integrable Optics Test Accelerator (IOTA) storage ring, where we carried out an absolute measurement (no free parameters or calibration) of a small vertical emittance (5–15 nm rms) of a flat beam by this new method, under conditions, when the small vertical emittance is unresolvable by a conventional synchrotron light beam size monitor.

43 PARTICLE ACCELERATORS↗

Applying Waveform Correlation to Mining Blasts Using a Global Sparse Network

Agencies that monitor for underground nuclear tests are interested in techniques that automatically characterize mining blasts to reduce the human analyst effort required to produce high-quality event bulletins. Waveform correlation is effective in finding similar waveforms from repeating seismic events, including mining blasts. We report the results of an experiment that uses waveform templates recorded by multiple International Monitoring System stations of the Comprehensive Nuclear-Test-Ban Treaty for up to 10 years prior to detect and identify mining blasts that occur during single weeks of study. We discuss approaches for template selection, threshold setting, and event detection that are specialized for mining blasts and a sparse, global network. We apply the approaches to two different weeks of study for each of two geographic regions, Wyoming and Scandinavia, to evaluate the potential for establishing a set of standards for waveform correlation processing of mining blasts that can be effective for operational monitoring systems with a sparse network. We compare candidate events detected with our processing methods to the Reviewed Event Bulletin of the International Data Centre to develop an intuition about potential reduction in analyst workload.

45 MILITARY TECHNOLOGY, WEAPONRY, AND NATIONAL DEF↗

Applying Waveform Correlation to Mining Blasts Using a Global Sparse Network

Agencies that monitor for underground nuclear tests are interested in techniques that automatically characterize mining blasts to reduce the human analyst effort required to produce high-quality event bulletins. Waveform correlation is effective in finding similar waveforms from repeating seismic events, including mining blasts. We report the results of an experiment that uses waveform templates recorded by multiple International Monitoring System stations of the Preparatory Commission for the Comprehensive Nuclear-Test-Ban Treaty Organization for up to 10 years prior to the time period of interest to detect and identify mining blasts that occur during single weeks of study. We discuss approaches for template selection, threshold setting, and event detection that are specialized for mining blasts and a sparse, global network. We apply the approaches to two different weeks of study for each of two geographic regions, Wyoming and Scandinavia, to evaluate the potential for establishing a set of standards for waveform correlation processing of mining blasts that can be effective for operational monitoring systems with a sparse network. We compare candidate events detected with our processing methods to the Reviewed Event Bulletin of the International Data Centre to develop an intuition about potential reduction in analyst workload.

98 NUCLEAR DISARMAMENT, SAFEGUARDS, AND PHYSICAL P↗

Shaker Table Test Plan

Currently, spent nuclear fuel (SNF) is stored in onsite independent spent fuel storage facilities (ISFSIs), which is a dry storage facility, at 55 nuclear power plant sites. The majority of SNF in dry storage is in welded metal canisters (2,917 canisters at the end of 2019). The canisters are loaded for storage in storage overpacks (vertical casks or horizontal storage modules) and placed on outdoor concrete pads. Because the SNF will be stored at ISFSIs for an extended period of time, there is growing concern with regards to the behavior of the SNF within these dry storage systems during earthquakes. To address these concerns, the SFWST program is considering conducting an earthquake shaker table test. The goal of this test is to determine the strains and accelerations on fuel assembly hardware and cladding during earthquakes of different magnitudes to better quantify the potential damage an earthquake could inflict on spent nuclear fuel rods. The seismic integrity of the storage system has been addressed in the past by the US Nuclear Regulatory Commission and is not the focus of this potential test. Instead the DOE would benefit from knowing the condition of the fuel cladding from storage, transportation, to disposal so that it can ascertain repository performance for the fuel and packaging in its final state. A seismic event is part of the possible loading events that the fuel could experience in its lifetime. This report proposes several earthquake shaker table tests with different degrees of complexity. Alternative 1 was defined in the FY20 work scope. Alternatives 2 and 3 were recently developed to take advantage of the NUHOMS 32PTH dry storage canister that may be available in FY21 for this test at a minimum cost to the project. The selection of the alternative(s) will depend on the available budget and the SFWST program priorities for the near future.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Laser Network US Experiments at the University of Texas at Austin

Under Subcontract B638654, The University of Texas at Austin (UT Austin) Center for High Energy Density Science supported three Laser Network US experiments and conducted upgrade planning for the Texas Petawatt Laser Facility. For the experiment “Investigation of the physics of MeV X-ray and particle generation using Compound Parabolic Concentrators” led by Dr. Andrew Mackinnon of Lawrence Livermore National Laboratory, UT Austin provided postdoctoral associate support in the person of Dr. Ganesh Tiwari. For the experiments “Megatesla magnetic fields and enhanced gamma-ray beam generation” led by Hans Rinderknecht of LLE, University of Rochester (experiment) and Alexey Arefiev of UC San Diego (theory) and “High resolution imaging of resonately accelerated electrons under tight focusing” led by Deepak Kumar of ELI-Beamlines, Czech Republic, UT Austin provided the Texas Petawatt Laser staff and a prorated share of the materials and supplies approximately equal to the average of those required for one 5-week experimental campaign. Summaries of these three experiments are provided in this report. Two staff members were hired—Dr. Sandra Bruce at 40% and Dr. Erhard Gaul at 50% time—to support Texas Petawatt Laser maintenance and operations and to plan for the Texas Relativistic Intensity Ultrafast Multi-beam Plasma Facility (TRIUMPF).

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

High Dose and Dose Rate 60 Co γ-Irradiation of High-Density Polyethylene

We have irradiated high-density polyethylene ribbons and cylinders to ~200 kGy at a dose rate of ~5 kGy day -1 , using a 60 Co source. The radiolytically-generated gas consists almost entirely of H 2 . Based on the time- and dose-dependence of the outgassing, we have determined the radiation- chemical yield for the evolved H 2 , as well as the diffusion coefficient of H 2 in HDPE. We find that the evolved gas yield G evolved depends on the interplay of sample geometry, experimental timescale, and the diffusion coefficient of H 2 in HDPE. When these factors facilitate completion of diffusion prior to gas quantification, such as for sub-mm-thickness ribbons, we measure a time- and dose-invariant value of G evolved = 0.0076 cm 3 std. H 2 J -1 that is in agreement with literature reports. When sample geometry and experiment timescale do not permit completion of diffusion, we measure a time- and dose-dependent value of G evolved . We have developed a model for the transient outgassing behavior of the cylinders, and fitted it to the experimental data. Based on these fits, we estimate a room-temperature diffusivity of D H 2 /HDPE ≈ 1.67 ± 0.12 x 10 -6 cm 2 s -1 for H 2 in HDPE, in good agreement with literature values. At present, the effects of dose rate and γ-photon energy on HDPE gas yield are not known and require further investigation.

36 MATERIALS SCIENCE↗

Enhancing the Useability of the IAEA's Physical Model: An Analysis of User Feedback

This study presents the results of Physical Model user interviews conducted with 12 people who have International Atomic Energy Agency (IAEA) safeguards experience. The goal of this report is to provide additional context for policy makers when prioritizing the needs of the IAEA regarding support for enhancements to the Physical Model. The interviews covered the general usability of the Physical Model, its effectiveness as a technical reference, and the scope and utility of the Physical Model's indicators and content. The key conclusions from these interviews are as follows: 1) The Physical Model is difficult to find and not well advertised. 2) The Physical Model can be difficult to use due to its format, which makes searching for information difficult, and lack of visual content. Therefore, the Physical Model should be supported in multiple formats (print, PDF, web) to maximize its usability for different stakeholders. 3) The scope of the Physical Model's content and indicators is likely sufficient, and translating indicators into other languages is unlikely to be worth the effort. 4) Despite its inefficiencies and other issues, the Physical Model in its current form is a vital (albeit under-utilized) resource for key stakeholders. 5) Despite its broad use case the Physical Model is not a catch-all tool and force-fitting the Physical Model into functions for which it has not been designed for would likely diminish its value. 6) It can be difficult to disentangle challenges related to the Physical Model and its usability from broader challenges at the Agency, such as general issues with communication and coordination. Based on these conclusions and considering the results of past studies on the Physical Model funded by NA-241, the analysis team developed a list of recommendations and associated actions for IAEA consideration. These recommendations are prioritized based on the assessed level of difficulty for the IAEA to implement a recommendation, emphasizing low hanging fruit then building to more ambitious changes to the Physical Model's format and content.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

ENDF/B-VIII.1 Validation (Preliminary Release 2 + New 239 Pu)

This document should serve as a reference for validation testing of nuclear data files included in the second preliminary release of ENDF/B-VIII.1 and the newly evaluated 239 Pu nuclear data file to be included in the third preliminary release of ENDF/B-VIII.1. Experiment names listed in this report are based on International Criticality Safety Benchmark Evaluation Project (ICSBEP) Handbook designations. Additional information on ICSBEP handbook designations can be found at https://www.oecd-nea.org/jcms/pl_20291/icsbep-handbook. The validation metrics used in this report include the effective neutron multiplication factor, k eff , and tritium production. All validation metrics were calculated using the radiation transport code Monte Carlo N-Particle (MCNP).

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Summary of Gas Generation Behavior Observed in 3013 Surveillance and Monitoring Program Shelf-Life Experiments

Gas generation experiments have been conducted in small- and full-scale test containers at Los Alamos National Laboratory on samples of plutonium oxide material collected from plutonium processes across the DOE complex and tested at the bounding conditions for the Department of Energy 3013 Standard. The gas composition and pressures in the sealed experimental containers were measured over periods of months to years. These experiments have provided results for the formation and consumption of hydrogen and other gases. The conditions supporting the formation of flammable gas mixtures of hydrogen and oxygen in flammable gas mixtures were also determined. Different behaviors were observed between the materials tested based on their compositions, the stabilization performed on the material, and the post stabilization handling of the material. Many of the experiments are still ongoing. This report summarizes the results obtained for the gas generation behavior for high-purity plutonium oxides and salt-bearing impure plutonium oxides in sealed containers.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Phase Transitions in Natural Vanadinite at High Pressures

The structural stability of vanadinite, Pb 5 [VO 4 ] 3 Cl, is reported by high-pressure experiments using synchrotron radiation X-ray diffraction (XRD) and Raman spectroscopy. XRD experiments were performed up to 44.6 GPa and 700 K using an externally-heated diamond anvil cell (EHDAC), and Raman spectroscopy measurements were performed up to 26.8 GPa at room temperature. XRD experiments revealed a reversible phase transition of vanadinite at 23 GPa and 600 K, which is accompanied by a discontinuous volume reduction and color change of the mineral from transparent to reddish during compression. The high-pressure Raman spectra of vanadinite show apparent changes between 18.0 and 22.8 GPa and finally become amorphous at 26.8 GPa, suggesting structural transitions of this mineral upon compression. The structural changes can be distinguished by the emergence of a new vibrational mode that can be attributed to the distortion of [VO 4 ] and the larger distortion of the V–O bonds, respectively. The [VO 4 ] internal modes in vanadinite give isothermal mode Grüneisen parameters varying from 0.149 to 0.286, yielding an average VO 4 internal mode Grüneisen parameters of 0.202.

36 MATERIALS SCIENCE↗

Impacts of Crystalline Host Rock on Repository Barrier Materials at 250 °C: Hydrothermal Co-Alteration of Wyoming Bentonite and Steel in the Presence of Grimsel Granodiorite

Direct disposal of dual-purpose canisters (DPC) has been proposed to streamline the disposal of spent nuclear fuel. However, there are scenarios where direct disposal of DPCs may result in temperatures in excess of the specified upper temperature limits for some engineered barrier system (EBS) materials, which may cause alteration within EBS materials dependent on local conditions such as host rock composition, chemistry of the saturating groundwaters, and interactions between barrier materials themselves. Here we report the results of hydrothermal experiments reacting EBS materials—bentonite buffer and steel—with an analogue crystalline host rock and groundwater at 250 °C. Experiment series explored the effect of reaction time on the final products and the effects of the mineral and fluid reactants on different steel types. Post-mortem X-ray diffraction, electron microprobe, and scanning electron microscopy analyses showed characteristic alteration of both bentonite and steel, including the formation of secondary zeolite and calcium silicate hydrate minerals within the bentonite matrix and the formation of iron-bearing clays and metal oxides at the steel surfaces. Swelling clays in the bentonite matrix were not quantitatively altered to non-swelling clay species by the hydrothermal conditions. The combined results of the solution chemistry over time and post-mortem mineralogy suggest that EBS alteration is more sensitive to initial groundwater chemistry than the presence of host rock, where limited potassium concentration in the solution prohibits conversion of the smectite minerals in the bentonite matrix to non-swelling clay species.

54 ENVIRONMENTAL SCIENCES↗

Experimental investigation of elemental and isotopic evaporation processes by laser heating in an aerodynamic levitation furnace

In this report we carried out evaporation experiments on a B-type calcium–aluminium-rich inclusion (CAI) melt in a gas-mixing aerodynamic levitation laser furnace, at 1873 K and an oxygen partial pressure of 10 -9.1 atm, for durations ranging from 60 to 600 s. Evaporation of SiO 2 and MgO follow the same trend as those observed in vacuum furnace experiments at the same temperature and starting composition, showing that their evaporation relative to one another from the melt is independent of pressure, oxygen fugacity, and hydrodynamical regime specific to the furnace. Isotopic ratios of Mg and Si in evaporation residues are used to derive fractionation factors of α 26/24 Mg vap-liq = 0.9906± 0.0004 and α 30/28 Si vap-lip = 0.9943±0.0003, which are both significantly closer to unity than those found for evaporation in a vacuum, which translates to less isotope fractionation. The residues are also less isotopically fractionated than expected for cases in which transport of the gas species away from the melt is diffusion-controlled at 1-atm. By analysing the flow regimes in our furnace, we find that advection by the levitating gas is the primary mode of mass transport away from the melt surface, as opposed to diffusion-limited transport in a vacuum or 1-atm tube furnace. A modified Hertz–Knudsen–Langmuir formulation accounts for this process, and shows that isotopic fractionation of both Si and Mg reflect a saturation factor (ratio of the pressure of the evaporating species to vapour saturation pressure) equal to 0.75. This is in perfect accord with recent measurements of Cu isotopic fractionation using a similar furnace. The fact that three elements (Mg, Si, Cu) with varying equilibrium vapour pressures, activity coefficients in the liquid, and diffusion coefficients in the gas have the same scaling behaviour to saturation pressure is a strong indication that the mechanism controlling evaporation is driven by the hydrodynamical regime imposed in the furnace. Therefore, this class of experiments can be used to constrain processes in which advection dominates over diffusion, such as (but not limited to) planetary ejecta, tektites, giant impacts, nebular condensation in a turbulent flow, or nuclear fallout material. Finally, the possibility to reach high temperatures (in excess of 3500 K) in this furnace allows it to be used to evaluate the activity coefficients of melt components in extreme conditions relevant to molten planetary interiors (i.e., magma oceans), with a specific focus on refractory elements.

58 GEOSCIENCES↗

CoMET Project Status and Accomplishments

FY2020 status report on the 'Combined Materials Experiment Toolkit (CoMET)' software application for the annual program review of the Nuclear Science User Facilities.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Identifying high-impact and high-uncertainty parameters in MiniFuel model predictions

The MiniFuel irradiation platform at Oak Ridge National Laboratory's High Flux Isotope Reactor (HFIR) is a flexible, high-throughput separate effects test capability. Finite element thermal models are relied upon to design MiniFuel experiments and to achieve experimental objectives. Recent reports show good agreement in the model prediction of target fuel temperatures, but as the capability of the experiments is extended to higher temperatures, the uncertainty in the model predictions must be quantified. To that end, high-impact, high-uncertainty parameters that contribute the most uncertainty to the model are identified. The uncertainty quantification was accomplished through a series of screening and sensitivity analyses. The first analysis utilizes the method of Morris to perform a computationally efficient preliminary screening that considers uncertainty in a large number of the model inputs. The most important parameters identified in the Morris screening study were then considered in a Sobol sensitivity analysis that more robustly ranks and quantifies the uncertainty associated with each parameter. From these analyses, it was determined that thermal contact conductance between components is the parameter that contributes the highest uncertainty. The estimated uncertainty of the MiniFuel model fuel temperature predictions is ±80 °C in the removable beryllium and ±40 °C in the vertical experiment facilities. In conclusion, the framework established by the series of sensitivity analyses presented herein could easily be adapted to fit the needs of accelerated fuel qualification processes.

Fuel, Irradiation↗

Design of a first-of-A-kind instrumented advanced test reactor irradiation Capsule experiment for In situ thermal conductivity measurements of metallic fuel

Metallic fuel undergoes dramatic microstructural changes early in life due to fission gas swelling until ~2–3 at% burnup which affects the conductivity of the material, however the evolution of metallic fuel thermal conductivity during this early phase burnup has never been successfully measured in situ. The Irradiated Material Properties Accelerated Characterization Test (IMPACT) experiment will be the first in a series of experiments to irradiate advanced nuclear metallic fuel specimens with novel embedded thermal conductivity probes in ATR. In the current work the IMPACT experiment final design and supporting analysis is reported in detail. Results are evaluated for various reactor operational conditions to meet the functional requirements of the experiment. Finally, the first iteration of this IMPACT experiment will provide data regarding thermal properties evolution in uranium-zirconium (U10Zr) fuel, but this experiment vehicle is envisioned for future advanced fuels and structural materials irradiations in ATR.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗