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At least 775 records · Page 43

Modeling and control for closed environment plant production systems

A computer program was developed to study multiple crop production and control in controlled environment plant production systems. The program simulates crop growth and development under nominal and off-nominal environments. Time-series crop models for wheat (Triticum aestivum), soybean (Glycine max), and white potato (Solanum tuberosum) are integrated with a model-based predictive controller. The controller evaluates and compensates for effects of environmental disturbances on crop production scheduling. The crop models consist of a set of nonlinear polynomial equations, six for each crop, developed using multivariate polynomial regression (MPR). Simulated data from DSSAT crop models, previously modified for crop production in controlled environments with hydroponics under elevated atmospheric carbon dioxide concentration, were used for the MPR fitting. The model-based predictive controller adjusts light intensity, air temperature, and carbon dioxide concentration set points in response to environmental perturbations. Control signals are determined from minimization of a cost function, which is based on the weighted control effort and squared-error between the system response and desired reference signal.

NASA Discipline Life Support Systems↗

Atomic-scale mechanism of carbon nucleation from a deep crustal fluid by replica exchange reactive molecular dynamics simulation

Here we present a mechanistic model of carbon nucleation and growth from a fluid at elevated temperature (T) and pressure conditions, typical of those found in the shallow Earth’s lithosphere. Our model uses a replica exchange reactive molecular dynamics framework in which molecular configurations are swapped between adjacent T replica at regular intervals according to underlying statistical mechanics. This framework allows predicting complex molecular structures and thermodynamics while remaining computationally efficient. Here we simulate the reactivity of an unstable mixture of CO 2 and CH 4 at 1000 K and 1 GPa. We find that the path to thermodynamic equilibrium is initially entropy-driven, producing a diversity of short-lived species, including various alcohols with intermediate carbon oxidation states. Cyclic and polycyclic radicals that are sometimes resonance-stabilized form next and set the stage for carbon nucleation. The carbon exsolution process releases abundant water, is exothermic and starts with the nucleation of a large aggregate of hydrogenated graphene flakes from covalently bonded polycyclic units. The carbon backbone of this nucleus subsequently grows into a hydrogen-depleted fullerene-like structure, before evolving toward a partially bilayered graphene layer. Overall, our results show that the mechanism of graphitic C formation is certainly not bimolecular, and that it may involve a combination of key condensation and radical chain reactions. This will help understand the isotopic, and reactive characteristics of carbon-bearing fluids during their upward transit through the Earth’s mantle and crust. Moreover, the mechanistic insights outlined here present intriguing similarities with the process of soot and interstellar dust formation, which suggests that the widespread distribution of abiotic polyaromatic and graphitic material on Earth and beyond may reflect the prevalence of a fundamental chemical pathway.

58 GEOSCIENCES↗

Derivation of Lake Areas and Elevations for the Mackenzie Basin Using Satellite Remote Sensing

Modelling hydrological processes in large watersheds flowing to the Arctic ocean is one step towards larger-scale modelling of the global water and energy cycles. Models of the Mackenzie River Basin (Northern Canada) are currently available but omit explicit routing of river flows through the three main lakes - Athabasca, Great Slave Lake and Great Bear Lake (Kite et al, 1994). These lakes occupy an area of 65,000 sq km but little gauge information is available. The levels of the lakes are only measured at a few points on the circumferences and river flows are only measured downstream. The hydraulic relationships between level/discharge and level/area/volume are uncertain. It has been previously shown that satellite remote sensing can be utilised in providing measurements of both lake surface area using imaging techniques and lake level using radar altimetry (Birkett, 1994). Here, we explore the application of these techniques to derive the lake levels and areas for the Mackenzie Basin lakes.

Birkett, Charon↗

Models for extracting vertical crustal movements from leveling data

Various adjustment strategies are being used in North America to obtain vertical crustal movements from repeated leveling. The more successful models utilize polynomials or multiquadric analysis to describe elevation change with a velocity surface. Other features permit determination of nonlinear motions, motions associated with earthquakes or episodes, and vertical motions of blocks where boundaries are prespecified. The preferred models for estimating crustal motions permit the use of detached segments of releveling to govern the shape of a velocity surface and allow for input from nonleveling sources such as tide gages and paired lake gages. Some models for extracting vertical crustal movements from releveling data are also excellent for adjusting leveling networks, and permit mixing old and new data in areas exhibiting vertical motion. The new adjustment techniques are more general than older static models and will undoubtedly be used routinely in the future as the constitution of level networks becomes mainly relevelings.

Holdahl, S. H.↗

Investigating Sources of Ozone over California Using AJAX Airborne Measurements and Models: Assessing the Contribution from Long Range Transport

High ozone (O3) concentrations at low altitudes (1.5e4 km) were detected from airborne Alpha Jet Atmospheric eXperiment (AJAX) measurements on 30 May 2012 off the coast of California (CA). We investigate the causes of those elevated O3 concentrations using airborne measurements and various models. GEOS-Chem simulation shows that the contribution from local sources is likely small. A back trajectory model was used to determine the air mass origins and how much they contributed to the O3 over CA. Low-level potential vorticity (PV) from Modern Era Retrospective analysis for Research and Applications 2 (MERRA-2) reanalysis data appears to be a result of the diabatic heating and mixing of airs in the lower altitudes, rather than be a result of direct transport from stratospheric intrusion. The Q diagnostic, which is a measure of the mixing of the air masses, indicates that there is sufficient mixing along the trajectory to indicate that O3 from the different origins is mixed and transported to the western U.S.The back-trajectory model simulation demonstrates the air masses of interest came mostly from the mid troposphere (MT, 76), but the contribution of the lower troposphere (LT, 19) is also significant compared to those from the upper troposphere/lower stratosphere (UTLS, 5). Air coming from the LT appears to be mostly originating over Asia. The possible surface impact of the high O3 transported aloft on the surface O3 concentration through vertical and horizontal transport within a few days is substantiated by the influence maps determined from the Weather Research and Forecasting Stochastic Time Inverted Lagrangian Transport (WRF-STILT) model and the observed increases in surface ozone mixing ratios. Contrasting this complex case with a stratospheric-dominant event emphasizes the contribution of each source to the high O3 concentration in the lower altitudes over CA. Integrated analyses using models, reanalysis, and diagnostic tools, allows high ozone values detected by in-situ measurements to be attributed to multiple source processes.

Ryoo, Ju-Mee↗

Photosynthetic capacity in middle-aged larch and spruce acclimates independently to experimental warming and elevated CO 2

Photosynthetic acclimation to both warming and elevated CO 2 of boreal trees remains a key uncertainty in modelling the response of photosynthesis to future climates. We investigated the impact of increased growth temperature and elevated CO 2 on photosynthetic capacity (V cmax and J max ) in mature trees of two North American boreal conifers, tamarack and black spruce. We show that V cmax and J max at a standard temperature of 25°C did not change with warming, while V cmax and J max at their thermal optima (T opt ) and growth temperature (T g ) increased. Moreover, V cmax and J max at either 25°C, T opt or T g decreased with elevated CO 2 . The J max /V cmax ratio decreased with warming when assessed at both T opt and T g but did not significantly vary at 25°C. The J max /V cmax increased with elevated CO 2 at either reference temperature. We found no significant interaction between warming and elevated CO 2 on all traits. If this lack of interaction between warming and elevated CO 2 on the V cmax , J max and J max /V cmax ratio is a general trend, it would have significant implications for improving photosynthesis representation in vegetation models. However, future research is required to investigate the widespread nature of this response in a larger number of species and biomes.

60 APPLIED LIFE SCIENCES↗

Flood Susceptibility Mapping Using Machine Learning and Geospatial-Sentinel-1 SAR Integration for Enhanced Early Warning Systems

This study presents a comprehensive framework for flood susceptibility mapping by integrating geospatial factors with both statistical and machine learning models. Thirteen Flood-related factors, including DEM, slope, TWI, NDVI, etc., are extracted as features of models, and historical flood data derived from Sentinel-1 SAR from 2018 to 2023 are used as the target variables of the models. These datasets are analyzed using a frequency-based statistical model and three machine learning models, including Random Forest, XGBoost, and CNN, to generate flood susceptibility maps. The performance of each model is evaluated through AUC; and SHAP scores are separately generated for Machine learning (ML) models to explain each feature contribution in the ML model. The generated susceptibility maps are validated by high-flood-risk locations monitored by flood sensors, BLE inundation models, and flood-prone areas suggested by the Local Community Task Force. The results indicate that the XGBoost model outperforms all other models, with an AUC of 0.92 and demonstrates the highest alignment with recommended high-flood-risk locations, while the frequency-based statistical model showed the weakest performance with an AUC of 0.65. SHAP value graphs highlight the elevation, slope, and TWI as the most influential features across all models. The susceptibility maps generated by the machine learning model show strong agreement with the BLE map and high-flood-risk areas identified by the local Community Task Force.

Google Engine↗

Cerebellar dysfunction in a mouse model of childhood-onset manganese-induced dystonia parkinsonism

Humans with pathogenic variants of the manganese (Mn) transporter gene SLC39A14 exhibit highly elevated brain Mn concentrations and childhood-onset dystonia-parkinsonism. Here we show that Slc39a14-knockout (KO) mice, a preclinical model of the disease with elevated Mn concentrations in the CB, express deficits in physiological tremor implicating cerebellar (CB) dysfunction. Imaging of intracellular Mn in Purkinje cells (PCs) using synchrotron-based X-ray fluorescence microscopy confirmed highly elevated Mn concentrations in the PCs of Slc39a14-KO mice. To determine biological pathways altered in the CB of Slc39a14-KO mice relative to wildtype (WT), we performed RNA sequencing and discovered significant upregulation of pathways and genes regulating immune response and cell death. To substantiate these findings, we performed quantitative autoradiography of the neuroinflammation biomarker Translocator Protein 18 kDa (TSPO) which was significantly increased in the CB of Slc39a14-KO mice relative to WT. The latter findings were confirmed via immunostaining with the microglial marker Iba-1, revealing widespread microglia activation and clustering in the CB cortex. Immunostaining for cleaved caspase-3 (cCASP3), a marker of apoptosis, showed increased number of PCs with positive immunolabeling for cCASP3 in Slc39a14-KO mice relative to WT. Degeneration of PCs was confirmed by Hematoxylin and Eosin (H&E) staining. Lastly, functional electrophysiological assessment of CB neurocircuitry revealed a marked decrease in firing rates of cerebellar nuclei (CN) neurons and increased variability of PC simple spikes firing. Collectively, these findings show, for the first time, Mn-induced PC degeneration and dysfunctional CB circuitry in Slc39a14-KO mice providing additional evidence for the pathological underpinnings of the dystonia-like movements, balance, and gait abnormalities in SLC39A14 mutation carriers.

36 MATERIALS SCIENCE↗

A Model-Model and Data-Model Comparison for the Early Eocene Hydrological Cycle

A range of proxy observations have recently provided constraints on how Earth's hydrological cycle responded to early Eocene climatic changes. However, comparisons of proxy data to general circulation model (GCM) simulated hydrology are limited and inter-model variability remains poorly characterised. In this work, we undertake an intercomparison of GCM-derived precipitation and P - E distributions within the extended EoMIP ensemble (Eocene Modelling Intercomparison Project; Lunt et al., 2012), which includes previously published early Eocene simulations performed using five GCMs differing in boundary conditions, model structure, and precipitation-relevant parameterisation schemes. We show that an intensified hydrological cycle, manifested in enhanced global precipitation and evaporation rates, is simulated for all Eocene simulations relative to the preindustrial conditions. This is primarily due to elevated atmospheric paleo-CO2, resulting in elevated temperatures, although the effects of differences in paleogeography and ice sheets are also important in some models. For a given CO2 level, globally averaged precipitation rates vary widely between models, largely arising from different simulated surface air temperatures. Models with a similar global sensitivity of precipitation rate to temperature (dP=dT ) display different regional precipitation responses for a given temperature change. Regions that are particularly sensitive to model choice include the South Pacific, tropical Africa, and the Peri-Tethys, which may represent targets for future proxy acquisition. A comparison of early and middle Eocene leaf-fossil-derived precipitation estimates with the GCM output illustrates that GCMs generally underestimate precipitation rates at high latitudes, although a possible seasonal bias of the proxies cannot be excluded. Models which warm these regions, either via elevated CO2 or by varying poorly constrained model parameter values, are most successful in simulating a match with geologic data. Further data from low-latitude regions and better constraints on early Eocene CO2 are now required to discriminate between these model simulations given the large error bars on paleoprecipitation estimates. Given the clear differences between simulated precipitation distributions within the ensemble, our results suggest that paleohydrological data offer an independent means by which to evaluate model skill for warm climates.

Boundary conditions↗

Measurement and interpretation of crustal deformation rates associated with postglacial rebound

Analysis of Global Positioning System (GPS) data from two sites separated by horizontal distance of only approximately 2.2 m yielded phase residuals exhibiting a systematic elevation angle dependence. One of the two GPS antennas was mounted on an approximately 1 m high concrete pillar, and the other was mounted on a standard wooden tripod. We performed elevation angle cutoff tests with these data, and established that the vertical coordinate of site position was sensitive to the minimum elevation angle (elevation cutoff) of the data analyzed. For example, the vertical coordinate of site position changed by 9.7 plus or minus 0.8 mm when the minimum elevation angle was increased from 10 to 25. We performed simulations based on a simple (ray tracing) multipath model with a single horizontal reflector, and demonstrated that the elevation angle cutoff test results and the pattern of the residual versus elevation angle could be qualitatively reproduced if the reflector were located 0.1-0.2 m beneath the antenna phase center. We therefore, hypothesized that the source of the elevation-angle-dependent error were multipath reflections and scattering and that the horizontal surface of the pillar, located a distance of approximately 0.2 m beneath the antenna phase center, was the primary reflector. We tested this hypothesis by placing microwave absorbing material between the antenna and the pillar in a number of configurations and analyzed the changes in apparent position of the antenna. The results indicate that (1) the horizontal surface of the pillar is indeed the main reflector, (2) both the concrete and the metal plate embedded in the pillar are significant reflectors, and (3) the reflection can be reduced to a great degree by the use of microwave absorbing materials. These results have significant implications for the accuracy of global GPS geodetic tracking networks which use pillar-antenna configuration identical or similar to the one used here (at the Westford WFRD GPS site).

Davis, James L.↗

Hot spot heat transfer - Its application to Venus and implications to Venus and earth

Using a model that gives a relationship between surface elevation, lithospheric thickness, and heat flux, the hot spot heat loss mechanism is tested for Venus. The mechanism is found to readily explain the predicted heat loss of the planet with a modest number of hot spots (of the order of 35). Lithospheric thickness variations can explain approximately 93 percent of the mapped topography of Venus. Above a radius of 6053 km, additional compensation is required, and this can be effected by incorporating a variable thickness crust into the model. If it is assumed that the crust is generated on the crests of the hot spots, probably by processes associated with volcanism, the model is consistent with nearly 99 percent of the mapped topography of Venus. In addition, the model is basically consistent with available gravity data and interpretations that suggest compensated topography and great depths of compensation (100-1000 km) for the midlatitudes of the planet. It is thought that the approximately 1 percent of the topography not explained by hot spot crustal generation is compensated at a shallower depth primarily by variations in crustal thickness that are not directly related to hot spot volcanism.

Morgan, P.↗

Hybrid Modeling Study on Grain Evolution in the Metal Welding Process and Its Potential Lunar Application

Metal is most commonly used structural material in a wide range of spacecraft, and welding is the principal method for joining metal components into functional systems. However, conducting welding experiments under extreme environments—such as microgravity or vacuum conditions in space—is prohibitively expensive and experimentally challenging. To overcome these limitations, multi-physics computational welding models provide a cost-effective and versatile alternative. In this work, the authors have developed a coupled thermal (fluid) microstructure simulation framework to model metal welding under varying gravity conditions. The framework integrates a mixed-mode heat transfer formulation (conduction, convection, and radiation) with molten pool fluid dynamics, enabling accurate prediction of temperature fields and weld-pool geometry. A grain growth model is further incorporated to capture the spatial and temporal evolution of microstructure, including grain size distribution and morphological transitions during solidification. This approach provides detailed insight into molten pool evolution and grain-level microstructure development throughout the welding process. By explicitly parameterizing environmental conditions, the model supports extrapolation to off-Earth manufacturing scenarios such as welding on the lunar surface. Tantalum—chosen in this study due to its high melting point, oxidation resistance, and mechanical stability at elevated temperatures—serves as the material system for model demonstration. Beyond Tantalum, the integrated multi-physics framework offers broad applicability for predictive welding simulations of various structural and refractory metals or alloys used in extreme terrestrial or extraterrestrial environments.

kinetic Monte Carlo (SPPARKS)↗

Quantifying precursors to void nucleation and coalescence in aluminum

Ductile rupture is a common failure mode for engineering alloys. It is generally comprised of three mechanisms: void nucleation at secondary particles, void growth, and coalescence of voids. Conventional models for ductile rupture have limited precision for predicting macroscopic failure. This is partially because they have been corroborated using ex-situ observations of these three mechanisms and calibrated by macroscopic strain or stress metrics. In this study, in-situ high-energy X-ray characterization was conducted to correlate sites of void nucleation via particle cracking and sites of void growth with grain-scale metrics. Here it is shown that particle cracking is not predicated by elevated stress metrics, which disagrees with classical models. Instead, particle cracking tended to occur for the largest, least spherical particles. This trend persisted on the aggregate-scale and within individual neighborhoods around particles. Furthermore, an Eshelby analysis illuminated a statistically significant increase in maximum principal stress within a cracked particle, compared to an uncracked particle. In-situ observations also revealed two separate examples of intragranular void growth comprised of flat, crack-like features that grew showing alignment with slip systems of the highest resolved shear stress. Post-mortem fractography revealed a secondary population of dimples on these crack-like features, implying that void sheeting may be occurring during this crack-like void growth. Furthermore, these in-situ observations imply that classical models for void growth, that assume a homogenous medium, should be extended to account for the anisotropic grain-level behavior to correctly capture distinct features of void nucleation and growth.

Al-2219↗

Observed and Imputed Volumetric Soil Water Content Timeseries for the New Mexico Elevation Gradient

Reliable soil water content (SWC) data are essential for understanding dryland ecosystem dynamics, but high-frequency SWC sensors often fail, creating gaps in critical datasets. To address this, we developed a Bayesian mixture model that imputes missing SWC using both linear interpolation and an ecosystem water balance model (SOILWAT2), tested across six AmeriFlux eddy covariance tower sites in the New Mexico Elevation Gradient, demonstrating its effectiveness in reconstructing SWC patterns while providing insights into the factors driving SWC variability. Daily volumetric soil water content (SWC) data are provided as csv-formatted spreadsheets for the six AmeriFlux sites (US-Seg, US-Ses, US-Wjs, US-Mpi, US-Vcp, and US-Vcs). For each site there is an observed SWC file (site_SWC_gapfill.csv) and a file that contains imputed SWC (imputed_SWC_site.csv). The observed SWC files contain temperature corrected sensor values, tower precipitation data, as well as outputs from SOILWAT2 simulations that were used to impute SWC. The imputed files contain the original observed SWC values and the imputed missing SWC values. When SWC was missing from the original data, the missing value was imputed based on the Bayesian imputation mixture model. The posterior mean of all imputed values is reported as "mean_X". When the observed SWC was NOT missing, mean_X = observed SWC value (original data). The standard deviation, 2.5th percentile and the 97.5th percentile for the imputed values are also reported in the imputed files. There are readme text files for each file type explaining the contents of each column.

54 ENVIRONMENTAL SCIENCES↗

Modeled Impacts of LULC and Climate Change Predictions on Water Quality in Belize

Land use and land cover (LULC) change can have detrimental effects on water quality. In Belize, agricultural expansion creates the risk of increased sediment load and excess nutrients in runoff water, while deforestation removes potential infiltration sites for this outflow. Climate change and evolving precipitation rates can intensify the quantity of runoff, further enabling the flow of sediments and excess nutrients out to the lagoon surrounding the Belize Barrier Reef Reserve System (BBRRS). This study estimated future water quality in Belize by projecting LULC change through 2090 across Belize’s major watersheds based on observed trends from 2008-2018. Those LULC projections were subsequently combined with soil type data, elevation, and precipitation rates into a hydrologic model to produce runoff estimates as a proxy for water quality. The two Coupled Model Intercomparison Project phase 6 (CMIP-6) scenarios employed in the study represented bookend climate change scenarios, and both predicted lower precipitation rates in Belize over the next century due to climate change. When holding LULC change constant, these climate scenarios projected a decrease in runoff, suggesting a positive relationship between precipitation and runoff. The southern watersheds in particular are projected to experience greater decreases in annual rainfall and runoff by 2090. When holding climate constant, runoff increased by approximately 2.8% in the Conservation-focused LULC scenario by 2090, which was 28% lower than the Business as Usual scenario and 42% lower than the Development scenario.

water resources↗

Millimeter wave attenuation prediction using a piecewise uniform rain rate model

A piecewise uniform rain rate distribution model is introduced as a quasi-physical model of real rain along earth-space millimeter wave propagation paths. It permits calculation of the total attenuation from specific attenuation in a simple fashion. The model predications are verified by comparison with direct attenuation measurements for several frequencies, elevation angles, and locations. Also, coupled with the Rice-Holmberg rain rate model, attenuation statistics are predicated from rainfall accumulation data.

Persinger, R. R.↗

Improved global prediction of 300 nautical mile mean free air anomalies

Current procedures used for the global prediction of 300nm mean anomalies starting from known values of 1 deg by 1 deg mean anomalies yield unreasonable prediction results when applied to 300nm blocks which have a rapidly varying gravity anomaly field and which contain relatively few observed 60nm blocks. Improvement of overall 300nm anomaly prediction is first achieved by using area-weighted as opposed to unweighted averaging of the 25 generated 60nm mean anomalies inside the 300nm block. Then, improvement of prediction over rough 300nm blocks is realized through the use of fully known 1 deg by 1 deg mean elevations, taking advantage of the correlation that locally exists between 60nm mean anomalies and 60nm mean elevations inside the 300nm block. An improved prediction model which adapts itself to the roughness of the local anomaly field is found to be the model of Least Squares Collocation with systematic parameters, the systematic parameter being the slope b which is a type of Bouguer slope expressing the correlation that locally exists between 60nm mean anomalies and 60nm mean elevations.

Cruz, J. Y.↗