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Digital image-processing system assembles maplike mosaic images of large areas of Earth from overlapping images of smaller areas generated by spaceborne synthetic-aperture radar (SAR). Automatically registers and blends smaller images with each other. Eliminates need for time-consuming, tedious manual processing. Modifiable to accept images from spaceborne optical sensors.
Purpose: To develop a system that can define the radiation isocenter and correlate this information with couch coordinates, laser alignment, optical distance indicator (ODI) settings, optical tracking system (OTS) calibrations, and mechanical isocenter walkout. Methods: Our team developed a multi-adapter, multi-purpose quality assurance (QA) and calibration device that uses an electronic portal imaging device (EPID) and in-house image-processing software to define the radiation isocenter, thereby allowing linear accelerator (Linac) components to be verified and calibrated. Motivated by the concept that each Linac component related to patient setup for image-guided radiotherapy based on cone-beam CT should be calibrated with respect to the radiation isocenter, we designed multiple concentric adapters of various materials and shapes to meet the needs of MV and KV radiation isocenter definition, laser alignment, and OTS calibration. The phantom's ability to accurately define the radiation isocenter was validated on 4 Elekta Linacs using a commercial ball bearing (BB) phantom as a reference. Radiation isocenter walkout and the accuracy of couch coordinates, ODI, and OTS were then quantified with the device. Results: The device was able to define the radiation isocenter within 0.3 mm. Radiation isocenter walkout was within ±1 mm at 4 cardinal angles. By switching adapters, we identified that the accuracy of the couch position digital readout, ODI, OTS, and mechanical isocenter walkout was within sub-mm. Conclusion: This multi-adapter, multi-purpose isocenter phantom can be used to accurately define the radiation isocenter and represents a potential paradigm shift in Linac QA. Moreover, multiple concentric adapters allowed for sub-mm accuracy for the other relevant components. This intuitive and user-friendly design is currently patent pending.
A computerized array processing system has been developed to reduce, analyze, display, and correlate a large number of orbital and earth-based geochemical, geophysical, and geological measurements of the moon on a global scale. The system supports the activities of a consortium of about 30 lunar scientists involved in data synthesis studies. The system was modeled after standard digital image-processing techniques but differs in that processing is performed with floating point precision rather than integer precision. Because of flexibility in floating-point image processing, a series of techniques that are impossible or cumbersome in conventional integer processing were developed to perform optimum interpolation and smoothing of data. Recently color maps of about 25 lunar geophysical and geochemical variables have been generated.
The DESGW group seeks to identify electromagnetic counterpartsof gravitational wave events seen by the LIGO-VIRGO network, such as thoseexpected from binary neutron star mergers or neutron star- black hole mergers.DESGW was active throughout the first two LIGO observing seasons, followingup several binary black hole mergers and the first binary neutron star merger,GW170817. We describe the modifications to the observing strategy generationand image processing pipeline between the second (ending in August 2017)and third (beginning in April 2019) LIGO observing seasons. The modifica-tions include a more robust observing strategy generator, further parallelizationof the image reduction software and dierence imaging processing pipeline,data transfer streamlining, and a web page listing identified counterpart candi-dates that updates in real time. Taken together, the additional parallelizationsteps enable us to identify potential electromagnetic counterparts within fullycalibrated search images in less than one hour, compared to the 3-5 hours itwould typically take during the first two seasons. These performance improve-ments are critical to the entire EM followup community, as rapid identification(or rejection) of candidates enables detailed spectroscopic followup by multipleinstruments as soon as possible, leading to more information about the environ-ment immediately following such gravitational wave events.
The DESGW group seeks to identify electromagnetic counterparts of gravitational wave events seen by the LIGO-VIRGO network, such as those expected from binary neutron star mergers or neutron star- black hole mergers. DESGW was active throughout the first two LIGO observing seasons, following up several binary black hole mergers and the first binary neutron star merger, GW170817. We describe the modifications to the observing strategy generation and image processing pipeline between the second (ending in August 2017) and third (beginning in April 2019) LIGO observing seasons. The modifications include a more robust observing strategy generator, further parallelization of the image reduction software and difference imaging processing pipeline, data transfer streamlining, and a public webpage listing identified counterpart candidates that updates in real time. Taken together, the additional parallelization steps enable us to identify potential electromagnetic counterpa rts within fully calibrated search images in less than one hour, compared to the 3-5 hours it would typically take during the first two seasons. These performance improvements are critical to the entire EM followup community, as rapid identification (or rejection) of candidates enables detailed spectroscopic followup by multiple instruments as soon as possible, leading to more information about the environment immediately following such gravitational wave events.
Accurate, precise, and rapid particle tracking in three dimensions remains a challenge; yet, its achievement will significantly enhance our understanding of living systems. We developed a multifocal microscopy (MFM) that allows snapshot acquisition of the imaging data, and an associated image processing approach, that together allow simultaneous 3D tracking of many fluorescent particles with nanoscale resolution. The 3D tracking was validated by measuring a known trajectory of a fluorescent bead with an axial accuracy of 19 nm through an image depth (axial range) of 3 pm and 4 nm precision of axial localization through an image depth of 4 pm. A second test obtained a uniform axial probability distribution and Brownian dynamics of beads diffusing in solution. We also validated the MFM approach by imaging fluorescent beads immobilized in gels and comparing the 3D localizations to their "ground truth" positions obtained from a confocal microscopy z-stack of finely spaced images. Finally, we applied our MFM and image processing approach to obtain 3D trajectories of insulin granules in pseudoislets of MIN6 cells to demonstrate its compatibility with complex biological systems. Our study demonstrates that multifocal microscopy allows rapid (video rate) and simultaneous 3D tracking of many "particles" with nanoscale accuracy and precision in a wide range of systems, including over spatial scales relevant to whole live cells.
Reduced Instruction Set Computer (RISC) workstations and Personnel Computers (PC) are very popular tools for office automation, command and control, scientific analysis, database management, and many other applications. However, when using Input/Output (I/O) intensive applications, the RISC workstations and PC's are often overburdened with the tasks of collecting, staging, storing, and distributing data. Also, by using standard high-performance peripherals and storage devices, the I/O function can still be a common bottleneck process. Therefore, the high-performance mass storage system, developed by Loral AeroSys' Independent Research and Development (IR&D) engineers, can offload a RISC workstation of I/O related functions and provide high-performance I/O functions and external interfaces. The high-performance mass storage system has the capabilities to ingest high-speed real-time data, perform signal or image processing, and stage, archive, and distribute the data. This mass storage system uses a hierarchical storage structure, thus reducing the total data storage cost, while maintaining high-I/O performance. The high-performance mass storage system is a network of low-cost parallel processors and storage devices. The nodes in the network have special I/O functions such as: SCSI controller, Ethernet controller, gateway controller, RS232 controller, IEEE488 controller, and digital/analog converter. The nodes are interconnected through high-speed direct memory access links to form a network. The topology of the network is easily reconfigurable to maximize system throughput for various applications. This high-performance mass storage system takes advantage of a 'busless' architecture for maximum expandability. The mass storage system consists of magnetic disks, a WORM optical disk jukebox, and an 8mm helical scan tape to form a hierarchical storage structure. Commonly used files are kept in the magnetic disk for fast retrieval. The optical disks are used as archive media, and the tapes are used as backup media. The storage system is managed by the IEEE mass storage reference model-based UniTree software package. UniTree software will keep track of all files in the system, will automatically migrate the lesser used files to archive media, and will stage the files when needed by the system. The user can access the files without knowledge of their physical location. The high-performance mass storage system developed by Loral AeroSys will significantly boost the system I/O performance and reduce the overall data storage cost. This storage system provides a highly flexible and cost-effective architecture for a variety of applications (e.g., realtime data acquisition with a signal and image processing requirement, long-term data archiving and distribution, and image analysis and enhancement).
Terrain-following navigation studies that have been done over the past two years in the navigation system section at JPL are described. A descent to Mars scenario based on Mars Rover and Sample Return mission profiles is described, and navigation and image processing issues pertaining to descent phases where landmark picture can be obtained are examined. A covariance analysis is performed to verify that landmark measurements from a terrain-following navigation system can satisfy precision landing requirements. Image processing problems involving known landmarks in actual pictures are considered. Mission design alternatives that can alleviate some of these problems are suggested.
The research effort described in this report represents a first attempt to investigate the radial redistribution of Zr in ternary fuel alloys U-xPu-10Zr (x = 0, 8, 19) irradiated in the in-reactor fuel experiments during the operation of the U.S. Department of Energy’s (DOE’s) Experimental Breeder Reactor II (EBR-II) at Idaho National Laboratory (INL) using methods of image processing on post-irradiation neutron radiographs. Approximately 130,000 metal fuel pins were irradiated in EBR-II during its 30 years of operation to develop and characterize existing and prospective fuels. For many of the metal fuel irradiation experiments, neutron radiography imaging was performed historically now allowing application of modern image analysis techniques to characterize fuel behavior, such as fuel swelling, fluff formation, and now, fuel alloy constituent redistribution. The redistribution of fuel components depends on the temperature field, radially, within the fuel. Specifically, Zr is expected to redistribute radially towards the center of the pin, as well as towards the outer zones. Currently, direct imaging of a pin cross-section through optical methods or scanning electron microscopy (SEM) is used to study the constituents’ redistribution, which is very time-consuming and can only be applied to a limited number of pins. An automated image processing technique allowing for the investigation of fuel radial redistribution zones would significantly accelerate data analysis. In general, if the fuel temperature is hot enough, three redistribution zones are expected, corresponding to the main fuel components (e.g., U, Pu, Zr). While more assessment will be performed in fiscal year (FY)-2023, it seems possible to differentiate the pins according to their fuel composition using image analysis techniques on neutron radiographs of metallic fuel pins based on the analysis to date.
Purpose: Open face head and neck masks allow for active patient monitoring during treatment and may reduced claustrophobia and anxiety compared to closed masks. The ability of open masks to limit intrafraction motion and to preserve the patient shape/position from simulation over protracted treatments should be considered. Methods: Thirty-two head and neck patients were prospectively randomized to treatment in a closed mask or a novel open face mask. All patients received daily volumetric imaging. The daily images were automatically rigidly registered to the planning CT’s offline using a commercial image processing tool. The shifts needed to optimize the registration, the mutual information coefficient (MI), and the Pearson correlation (PC) coefficients were recorded to evaluate shape preservation. The open group was set-up and monitored with surface imaging at treatment. The real time surface imaging information was recorded to evaluate intrafraction motion. Results: Sixteen patients were included in each group. Evaluations were made over a total of 984 fractions. The mean MI and PC showed significantly higher shape preservation for the open group than for the closed group (p = 0). The mean rotations for the open group were smaller or < 0.15° larger versus the closed group. The mean intrafraction motion for the open group was 0.93 +/−0.99 mm (2 SD). The maximum single fraction displacement was 3.2 mm. Fourteen of 16 patients showed no significant correlation of motion with fraction number (p > 0.05). Conclusion: The open masks preserved shape as well as the closed masks, and they limited motion to < 2 mm for 95% of the treated fractions. These results are consistent over treatment courses of up to 35 fractions. The open mask is suitable for treatment with or without active monitoring. This work was partially supported by Qfix.
The near-nucleus dust coma structure of Comet Halley are studied using modern digital image processing techniques on photographs taken in 1910. Recent investigations carried out in conjunction with the Near-Nucleus Studies Net of the IHW to better understand the characteristics and behavior of Comet Halley are reviewed. A new image processing algorithm developed to enhance coma feature boundaries permits their evolution over as many as three days to be followed. The features can be modeled to derive information on the nucleus spin vector, particle sizes, ejection velocities and distribution of emission areas on the nucleus. Useful contributions by observers in the Astrometry Net are also discussed.
Purpose: With the advent of digital slide scanning technologies and the potential proliferation of large repositories of digital pathology images, many research studies can leverage these data for biomedical discovery and to develop clinical applications. However, quantitative analysis of digital pathology images is impeded by batch effects generated by varied staining protocols and staining conditions of pathological slides. Methods: To overcome this problem, this paper proposes a novel, fully automated stain normalization method to reduce batch effects and thus aid research in digital pathology applications. Their method, intensity centering and histogram equalization (ICHE), normalizes a diverse set of pathology images by first scaling the centroids of the intensity histograms to a common point and then applying a modified version of contrast-limited adaptive histogram equalization. Normalization was performed on two datasets of digitized hematoxylin and eosin (H&E) slides of different tissue slices from the same lung tumor, and one immunohistochemistry dataset of digitized slides created by restaining one of the H&E datasets. Results: The ICHE method was evaluated based on image intensity values, quantitative features, and the effect on downstream applications, such as a computer aided diagnosis. For comparison, three methods from the literature were reimplemented and evaluated using the same criteria. The authors found that ICHE not only improved performance compared with un-normalized images, but in most cases showed improvement compared with previous methods for correcting batch effects in the literature. Conclusions: ICHE may be a useful preprocessing step a digital pathology image processing pipeline.
Jackson State University recently established the Center for Spatial Data Research and Applications, a Geographical Information System (GIS) and remote sensing laboratory. Taking advantage of new technologies and new directions in the spatial (geographic) sciences, JSU is building a Center of Excellence in Spatial Data Management. New opportunities for research, applications, and employment are emerging. GIS requires fundamental shifts and new demands in traditional computer science and geographic training. The Center is not merely another computer lab but is one setting the pace in a new applied frontier. GIS and its associated technologies are discussed. The Center's facilities are described. An ARC/INFO GIS runs on a Vax mainframe, with numerous workstations. Image processing packages include ELAS, LIPS, VICAR, and ERDAS. A host of hardware and software peripheral are used in support. Numerous projects are underway, such as the construction of a Gulf of Mexico environmental data base, development of AI in image processing, a land use dynamics study of metropolitan Jackson, and others. A new academic interdisciplinary program in Spatial Data Management is under development, combining courses in Geography and Computer Science. The broad range of JSU's GIS and remote sensing activities is addressed. The impacts on changing paradigms in the university and in the professional world conclude the discussion.
This document reports the design, implementation and testing of a small silicon resource usage, very flexible arbitrary percentile finding scheme called the Tiny Median Filter. It can be used not only as a median filter in image processing with square filtering windows, but also for applications of any percentile filter or maximum or minimum finder with any size of data set as long as the number of bits of the data is finite. It opens possibilities for image processing tasks with non-square or irregular filter windows. In this scheme, data swapping or data bit manipulating are avoided and high functional efficiency of the logic components is applied to save silicon resources. Some logic functions are absorbed into other functions to further reduce the complexity. The combinational logic paths are designed to be sufficiently short so that the firmware can be compiled to the maximum operating frequency allowed by the block memories of the FPGA devices. The Tiny Median Filter receives, processes and output data in non-stop manner with no irregular timing which helps to simplify design of surrounding stages.
Continuing our series of observations of coronal motion and dynamics over the solar-activity cycle, we observed from sites in Queensland, Australia, during the 2012 November 13 (UT)/14 (local time) total solar eclipse. The corona took the low-ellipticity shape typical of solar maximum (flattening index ε = 0.01), a change from the composite coronal images we observed and analyzed in this journal and elsewhere for the 2006 and 2008-2010 eclipses. After crossing the northeast Australian coast, the path of totality was over the ocean, so further totality was seen only by shipborne observers. Our results include velocities of a coronal mass ejection (CME; during the 36 minutes of passage from the Queensland coast to a ship north of New Zealand, we measured 413 km s{sup –1}) and we analyze its dynamics. We discuss the shapes and positions of several types of coronal features seen on our higher-resolution composite Queensland coronal images, including many helmet streamers, very faint bright and dark loops at the bases of helmet streamers, voids, and radially oriented thin streamers. We compare our eclipse observations with models of the magnetic field, confirming the validity of the predictions, and relate the eclipse phenomenology seen with the near-simultaneous images from NASA's Solar Dynamics Observatory (SDO/AIA), NASA's Extreme Ultraviolet Imager on Solar Terrestrial Relations Observatory, ESA/Royal Observatory of Belgium's Sun Watcher with Active Pixels and Image Processing (SWAP) on PROBA2, and Naval Research Laboratory's Large Angle and Spectrometric Coronagraph Experiment on ESA's Solar and Heliospheric Observatory. For example, the southeastern CME is related to the solar flare whose origin we trace with a SWAP series of images.
An approach toward low-pass, high-pass and band-pass filtering is presented. Convolution coefficients possessing the filtering speed associated with a moving smoothing average without suffering a loss of resolution are discussed. Resolution was retained because the coefficients represented the equivalance of applying high order two-dimensional regression calculations to an image without considering the time-consuming summations associated with the usual normal equations. The smoothing (low-pass) and roughing (high-pass) aspects of the filters are a result of being derived from regression theory. The coefficients are universal integer valves completely described by filter size and surface order, and possess a number of symmetry properties. Double convolution lead to a single set of coefficients with an expanded mask which can yield band-pass filtering and the surface normal. For low order surfaces (0,1), the two-dimensional convolute integers were equivalent to a moving smoothing average.
We present results from a Hubble Space Telescope (HST) program characterizing the atmospheres of the outer two planets in the HR8799 system. The images were taken over 15 orbits in three near-infrared (near-IR) medium-band filters—F098M, F127M, and F139M—using the Wide Field Camera 3. One of the three filters is sensitive to a water absorption band inaccessible from ground-based observations, providing a unique probe of the thermal emission from the atmospheres of these young giant planets. The observations were taken at 30 different spacecraft rolls to enable angular differential imaging (ADI), and the full data set was analyzed with the Karhunen–Loéve Image Projection routine, an advanced image processing algorithm adapted to work with HST data. To achieve the required high contrast at subarcsecond resolution, we utilized the pointing accuracy of HST in combination with an improved pipeline designed to combine the dithered ADI data with an algorithm designed to both improve the image resolution and accurately measure the photometry. The results include F127M (J) detections of the outer planets, HR8799b and c, and the first detection of HR8799b in the water-band (F139M) filter. The F127M photometry for HR8799c agrees well with fitted atmospheric models, resolving the longstanding difficulty in consistently modeling the near-IR flux of the planet.
The goal of our research is to better understand the functional relationship between cumulative daily skeletal loading generated by daily activity and the regulation of bone density and bone structure. We have proposed the calcaneus and tibia as useful model bone sites loaded by internal forces in equilibrium with the ground reaction force during gait. The daily history of the ground reaction force is a good relative measure of daily lower limb and calcaneal loading that can be compared to bone density and structure of the calcaneus and cross-sectional geometry of the tibia and fibula. Over the past several years, we have developed image-processing technologies to improve our ability to measure bone density and structure in the calcaneus and lower leg non-invasively with computed tomography and bone densitometry, or DXA. The objective of our current research effort is to determine the accuracy and precision of our CT and DXA image processing methods.