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All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Optimization of a Lethal, Combat-Relevant Model of Sterile Inflammation in Mice for Drug Candidate Screening

ABSTRACT Introduction Extensive trauma, commonly seen in wounded military Service Members, often leads to a severe sterile inflammation termed systemic inflammatory response syndrome (SIRS), which can progress to multiple organ dysfunction syndrome (MODS) and death. MODS is a serious threat to wounded Service Members, historically causing 10% of all deaths in trauma admissions at a forward deployed combat hospital. The importance of this problem will be exacerbated in large-scale combat operations, in which evacuation will be delayed and care of complex injuries at lower echelons of care may be prolonged. The main goal of this study was to optimize an existing mouse model of lethal SIRS/MODS as a therapeutic screening platform for the evaluation of immunomodulatory drugs. Materials and Methods Male C57BL/6 mice were euthanized, and the bones and muscles were collected and blended into a paste termed tissue–bone matrix (TBX). The TBX at 12.5%–20% relative to body weight of each recipient mouse was implanted into subcutaneous pouches created on the dorsum of anesthetized animals. Mice were observed for clinical scores for up to 48 hours postimplantation and euthanized at the preset point of moribundity. To test effects of anesthetics on TBX-induced mortality, animals received isoflurane or ketamine/xylazine (K/X). In a separate set of studies, mice received TBX followed by intraperitoneal injection with 20 mg/kg or 40 mg/kg Eritoran or a placebo carrier. All Eritoran studies were performed in a blinded fashion. Results We observed that K/X anesthesia significantly increased the lethality of the implanted TBX in comparison to inhaled anesthetics. Although all the mice anesthetized with isoflurane and implanted with 12.5% TBX survived for 24 hours, 60% of mice anesthetized with K/X were moribund by 24 hours postimplantation. To mimic more closely the timing of lethal SIRS/MODS following polytrauma in human patients, we extended observation to 48 hours. We performed TBX dose–response studies and found that as low as 15%, 17.5%, and 20% TBX caused moribundity/mortality in 50%, 80%, and 100% mice, respectively, over a 48-hour time period. With 17.5% TBX, we tested if moribundity/mortality could be rescued by anti-inflammatory drug Eritoran, a toll-like receptor 4 antagonist. Neither 20 mg/kg nor 40 mg/kg doses of Eritoran were found to be effective in this model. Conclusions We optimized a TBX mouse model of SIRS/MODS for the purpose of evaluating novel therapeutic interventions to prevent trauma-related pathophysiologies in wounded Service Members. Negative effects of K/X on lethality of TBX should be further evaluated, particularly in the light of widespread use of ketamine in treatment of pain. By mimicking muscle crush, bone fracture, and necrosis, the TBX model has pleiotropic effects on physiology and immunology that make it uniquely valuable as a screening tool for the evaluation of novel therapeutics against trauma-induced SIRS/MODS.

General & Internal Medicine↗
DOE OSTI2023

Screening the complex biological behavior of late lanthanides through genome-wide interactions

Abstract Despite their similar physicochemical properties, recent studies have demonstrated that lanthanides can display different biological behaviors. Hence, the lanthanide series can be divided into three parts, namely early, mid, and late lanthanides, based on their interactions with biological systems. In particular, the late lanthanides demonstrate distinct, but poorly understood biological activity. In the current study, we employed genome-wide functional screening to help understand biological effects of exposure to Yb(III) and Lu(III), which were selected as representatives of the late lanthanides. As a model organism, we used Saccharomyces cerevisiae, since it shares many biological functions with humans. Analysis of the functional screening results indicated toxicity of late lanthanides is consistent with disruption of vesicle-mediated transport, and further supported a role for calcium transport processes and mitophagy in mitigating toxicity. Unexpectedly, our analysis suggested that late lanthanides target proteins with SH3 domains, which may underlie the observed toxicity. This study provides fundamental insights into the unique biological chemistry of late lanthanides, which may help devise new avenues toward the development of decorporation strategies and bio-inspired separation processes.

Pallares, Roger M. (ORCID:0000000174238706)↗
DOE OSTI2024

CO2 response screen in grass Brachypodium reveals the key role of a MAP kinase in CO2-triggered stomatal closure

Abstract Plants respond to increased CO2 concentrations through stomatal closure, which can contribute to increased water use efficiency. Grasses display faster stomatal responses than eudicots due to dumbbell-shaped guard cells flanked by subsidiary cells working in opposition. However, forward genetic screening for stomatal CO2 signal transduction mutants in grasses has yet to be reported. The grass model Brachypodium distachyon is closely related to agronomically important cereal crops, sharing largely collinear genomes. To gain insights into CO2 control mechanisms of stomatal movements in grasses, we developed an unbiased forward genetic screen with an EMS-mutagenized B. distachyon M5 generation population using infrared imaging to identify plants with altered leaf temperatures at elevated CO2. Among isolated mutants, a “chill1” mutant exhibited cooler leaf temperatures than wild-type Bd21-3 parent control plants after exposure to increased CO2. chill1 plants showed strongly impaired high CO2-induced stomatal closure despite retaining a robust abscisic acid-induced stomatal closing response. Through bulked segregant whole-genome sequencing analyses followed by analyses of further backcrossed F4 generation plants and generation and characterization of sodium azide and CRISPR-cas9 mutants, chill1 was mapped to a protein kinase, Mitogen-Activated Protein Kinase 5 (BdMPK5). The chill1 mutation impaired BdMPK5 protein-mediated CO2/HCO3− sensing together with the High Temperature 1 (HT1) Raf-like kinase in vitro. Furthermore, AlphaFold2-directed structural modeling predicted that the identified BdMPK5-D90N chill1 mutant residue is located at the interface of BdMPK5 with the BdHT1 Raf-like kinase. BdMPK5 is a key signaling component that mediates CO2-induced stomatal movements and is proposed to function as a component of the primary CO2 sensor in grasses.

Lopez, Bryn N. K. (ORCID:0009000937288216)↗
DOE OSTI2015

Is the cosmological constant screened in Liouville gravity with matter?

In this study, there has been a proposal that infrared quantum effects of massless interacting field theories in de Sitter space may provide time-dependent screening of the cosmological constant. As a concrete model of the proposal, we study the three loop corrections to the energy–momentum tensor of massless λΦ 4 theory in the background of classical Liouville gravity in D = 2 dimensional de Sitter space. We find that the cosmological constant is screened, in sharp contrast to the massless λΦ 4 theory in D = 4 dimensions due to the sign difference between the cosmological constant of the Liouville gravity and that of the Einstein gravity. To argue for the robustness of our prediction, we introduce the concept of time-dependent infrared counter-terms and examine if they recover the de Sitter invariance in the λΦ 4 theory in comparison with the Sine–Gordon model, where it was possible.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2025

Bias-hardened estimators of patchy screening profiles

Detecting anisotropic screening of the cosmic microwave background (CMB) holds the promise of revealing the distribution of gas in the Universe, characterizing the complex processes of galaxy formation and feedback, and studying the epoch of reionization. Estimators for inhomogeneous screening, including some recently proposed small-scale (stacked) estimators, are quadratic or higher order in the CMB temperature or polarization fields and are therefore subject to contamination from CMB lensing. We review the origin of this lensing bias and show that, when stacking on unWISE galaxies, the expected lensing bias dominates the signal if left unmitigated. Hardening techniques that null the lensing bias have been proposed for standard quadratic estimators, whereas only approximate methods have been proposed for stacked estimators. In conclusion, we review these techniques and apply the former to stacked estimators, presenting several strategies (including the optimal strategy) to null lensing contamination when stacking on any large-scale structure tracer.

Cosmic microwave background↗
DOE OSTI2011

Effects of dynamical screening on single ionization of sodium by electron impact in doubly symmetric geometry

A dynamically screened three-Coulomb-wave model (DS3C) is applied to study the single ionization of sodium by electron impact. Triply differential cross sections (TDCS) are calculated in doubly symmetric geometry at excess energies of 6, 10, 15, 20, 30, 40, 50, and 60 eV. Comparisons are made among DS3C and the latest experimental data and such theoretical predictions as the three-Coulomb-wave function approach, the distorted-wave Born approximation, and the nonperturbative convergent close-coupling method. The angular distribution and relative magnitude of the present TDCS are found to qualitatively reproduce the reported experimental data. It is shown that dynamically screened effects are important in the geometries studied here.

74 ATOMIC AND MOLECULAR PHYSICS↗
DOE OSTI2011

Lower bound on the coefficient of an exchangelike energy for a single bound electron in a screened Coulomb potential

The spurious self-interaction energy, which is one-half the integrated electrostatic interaction energy of a normalized electronic charge distribution with the potential field generated by itself, is calculated analytically for a 1s-like electron charge distribution governed by an attractive screened Hulthen-type model potential. The exact result obtained is used, via an energetic cancellation constraint and a convenient Hoelder's integral inequality, to deduce an analytical lower bound for the screening-dependent positive coefficient of a negative exchange-like energy term applied routinely in the local-density approximation to density functional theory with Coulomb potentials. The bare Coulomb case is investigated by Sobolev's integral inequality as well.

74 ATOMIC AND MOLECULAR PHYSICS↗
DOE OSTI2011

Quantum and classical solutions for statically screened two-dimensional Wannier-Mott excitons

Quantum solutions and classical orbits are discussed for statically screened Wannier-Mott excitons for two closely related potentials: the Stern-Howard potential and a suggested simple focusing one. Bound states and exact ''quantized'' values of screening are obtained as well. For the suggested potential, the scattering matrix, the Regge poles, and the transmission coefficient are calculated exactly. We argue that the simple potential can be utilized in applications instead of the Stern-Howard potential, which is difficult to handle.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2019

Electronic structure as a guide in screening for potential thermoelectrics: Demonstration for half-Heusler compounds

In this study, we adopt a high-throughput search strategy that begins with electronic structure features to screen a set of half-Heusler compounds for thermoelectric performance. This is motivated by the contradictory electrical transport requirements, specifically high electrical conductivity σ and high thermopower S for obtaining high figure of merit ZT. We use an electronic fitness function that measures the extent to which a specific band structure decouples σ and S for this purpose. We then perform detailed, more costly, calculations of thermal conductivity and electrical properties for those compounds that have a high electronic fitness. This provides an efficient method for identifying promising compounds from a set of candidates. Lastly, we apply this to a set of 75 previously studied half-Heusler compounds. The approach identifies several compounds as having potential as thermoelectric materials. Importantly, these include not only some previously identified candidates, but also some other compounds that had not been identified previously using other screening methods.

36 MATERIALS SCIENCE↗
DOE OSTI2020

Equilibrium field theory of magnetic monopoles in degenerate square spin ice: Correlations, entropic interactions, and charge screening regimes

In this work, we describe degenerate square spin as an ensemble of magnetic monopoles coupled via an emergent entropic field that subsumes the effect of the underlying spin vacuum. We compute their effective free energy, entropic interaction, correlations, screening, and structure factor, and find that they coincide with the experimental ones. Unlike in pyrochlore ices, a dimensional mismatch between real and entropic interactions leads to weak singularities at the pinch points and algebraic correlations at long distances. This algebraic screening can be, however, camouflaged by a pseudoscreening regime.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2019

Relaxing Kondo-screened Kramers doublets in CeRhSi 3

${\mathrm{CeRhSi}}_{3}$ is a superconductor under pressure coexisting with a weakly antiferromagnetic phase characterized by a Bragg peak at q → 0 = (~ 0.2,0,0.5) [N. Aso et al., J. Magn. Magn. Mater. 310, 602 (2007)]. The compound is also a heavy-fermion material with a large specific heat coefficient ${\gamma}=110$ mJ ${\mathrm{mol}}^{{-}1}{\mathrm{K}}^{{-}2}$ and a high Kondo temperature of ${T}_{K}=50$ K, indicating ${\mathrm{CeRhSi}}_{3}$ is in a strongly Kondo screened state. We apply high-resolution neutron spectroscopy to investigate the magnetic fluctuations in the normal phase, at ambient pressures, and at low temperatures. We measure a commensurate dynamic response centered around the Q → = (0,0,2) position that gradually evolves to $H{\sim}0.2$ with decreasing temperature and/or energy transfers. The response is broadened both in momentum and energy and is not reminiscent of sharp spin wave excitations found in insulating magnets where the electrons are localized. We parametrize the excitation spectrum and temperature dependence using a heuristic model utilizing the random-phase approximation to couple relaxing ${\mathrm{Ce}}^{3+}$ ground-state Kramers doublets with a Kondo-like dynamic response. With a Ruderman-Kittel-Kasuya-Yosida exchange interaction within the $ab$ plane and an increasing single-site susceptibility, we can qualitatively reproduce the neutron spectroscopic results in ${\mathrm{CeRhSi}}_{3}$ and, namely, the trade-off between scattering at commensurate and incommensurate positions. We suggest that the antiferromagnetic phase in ${\mathrm{CeRhSi}}_{3}$ is driven by weakly correlated relaxing localized Kramers doublets and that ${\mathrm{CeRhSi}}_{3}$ at ambient pressures is on the border between a Rudderman-Kittel-Yosida antiferromagnetic state and a Kondo-screened phase where static magnetism is predominately absent.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2019

Screened fifth forces mediated by dark matter-baryon interactions: Theory and astrophysical probes

We derive the details of a new screening mechanism where the interactions of baryons and dark matter can be screened according to the local dark matter density. In this mechanism, the value of Newton’s constant is dark matter-density dependent, allowing for the possibility that astrophysical phenomena are very different in galaxies less dense than the Milky Way. The parametrized post-Newtonian parameter γ, which quantifies the difference between kinematical and lensing probes, also depends on dark matter density. We calculate the effects of varying G on various stages of stellar evolution, focusing on observables that impact cosmology: the Cepheid period-luminosity relation and the supernova Ia magnitude-redshift relation. Other potential tests of the model are also investigated including main-sequence, post-main-sequence, and low-mass dwarf stars. Finally, we discuss how extragalactic tests of γ could provide complementary constraints.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Inverse bremsstrahlung absorption rate for super-Gaussian electron distribution functions including plasma screening

Here we provide analytic expressions for the effective Coulomb logarithm for inverse bremsstrahlung absorption which predict significant corrections to the Langdon effect and overall absorption rate compared to previous estimates. The calculation of the collisional absorption rate of laser energy in a plasma by the inverse bremsstrahlung mechanism usually makes the approximation of a constant Coulomb logarithm. We dispense with this approximation and instead take into account the velocity dependence of the Coulomb logarithm, leading to a more accurate expression for the absorption rate valid in both classical and quantum conditions. In contrast to previous work, the laser intensity enters into the Coulomb logarithm. In most laser-plasma interactions the electron distribution function is super-Gaussian [Langdon, Phys. Rev. Lett. 44, 575 (1980)], and we find the absorption rate under these conditions is increased by as much as ≈ 30% compared to previous estimates at low density. In many cases of interest the correction to Langdon's predicted reduction in absorption is large; for example at Z = 6 and Te = 400 eV the Langdon prediction for the absorption is in error by a factor of ≈ 2. However, we also account for the additional effect of plasma screening, which predicts a reduction in absorption by a similar amount (up to ≈ 30%). These two effects compete to determine the overall absorption, which may be increased or decreased, depending on the conditions. The corrections can be incorporated into radiation-hydrodynamics simulation codes by replacing the familiar Coulomb logarithm with an analytic expression which depends on the super-Gaussian order “M” and the screening length.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2015

Unified description of linear screening in dense plasmas

Electron screening of ions is among the most fundamental properties of plasmas, determining the effective ionic interactions that impact all properties of a plasma. With the development of new experimental facilities that probe high-energy-density physics regimes ranging from warm dense matter to hot dense matter, a unified framework for describing dense plasma screening has become essential. Such a unified framework is presented here based on finite-temperature orbital-free density functional theory, including gradient corrections and exchange-correlation effects. We find a new analytic pair potential for the ion-ion interaction that incorporates moderate electronic coupling, quantum degeneracy, gradient corrections to the free energy, and finite temperatures. This potential can be used in large-scale “classical” molecular dynamics simulations, as well as in simpler theoretical models (e.g., integral equations and Monte Carlo), with no additional computational complexity. The new potential theoretically connects limits of Debye-Hückel–Yukawa, Lindhard, Thomas-Fermi, and Bohmian quantum hydrodynamics descriptions. In conclusion, based on this new potential, we predict ionic static structure factors that can be validated using x-ray Thomson scattering data.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2019

Rigid Band Shifts in Two-Dimensional Semiconductors through External Dielectric Screening

In this work, we investigate the effects of external dielectric screening on the electronic dispersion and the band gap in the atomically thin, quasi-two-dimensional (2D) semiconductor WS 2 using angle-resolved photoemission and optical spectroscopies, along with first-principles calculations. We find the main effect of increased external dielectric screening to be a reduction of the quasiparticle band gap, with rigid shifts to the bands themselves. Specifically, the band gap of monolayer WS 2 is decreased by about 140 meV on a graphite substrate as compared to a hexagonal boron nitride substrate, while the electronic dispersion of WS 2 remains unchanged within our experimental precision of 17 meV. These essentially rigid shifts of the valence and conduction bands result from the special spatial structure of the changes in the Coulomb potential induced by the dielectric environment of the monolayer.

36 MATERIALS SCIENCE↗
DOE OSTI2021

Dynamic Tilting of Ferroelectric Domain Walls Caused by Optically Induced Electronic Screening

Optical excitation perturbs the balance of phenomena selecting the tilt orientation of domain walls within ferroelectric thin films. The high carrier density induced in a low-strain BaTiO3 thin film by an above-bandgap ultrafast optical pulse changes the tilt angle that 90° a/c domain walls form with respect to the substrate-film interface. The dynamics of the changes are apparent in time-resolved synchrotron x-ray scattering studies of the domain diffuse scattering. Tilting occurs at 298 K, a temperature at which the a/b and a/c domain phases coexist but is absent at 343 K in the better ordered single-phase a/c regime. Furthermore, phase coexistence at 298 K leads to increased domain-wall charge density, and thus a larger screening effect than in the single-phase regime. The screening mechanism points to new directions for the manipulation of nanoscale ferroelectricity.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2024

Dark Photon Limits from Patchy Dark Screening of the Cosmic Microwave Background

Dark photons that kinetically mix with the Standard Model photon give rise to new spectral anisotropies (patchy dark screening) in the cosmic microwave background (CMB) due to conversion of photons to dark photons within large-scale structure. We utilize predictions for this patchy dark screening signal to provide the tightest constraints to date on the dark photon kinetic mixing parameter [ ϵ ≲ 4.5 × 10 − 8 (95% confidence level)] over the mass range 10 − 13 eV ≲ m A ′ ≲ 10 − 11 eV , almost an order of magnitude stronger than previous limits, by applying state-of-the-art component separation techniques to the cross-correlation of CMB and unWISE galaxy survey data. Published by the American Physical Society 2024

McCarthy, Fiona (ORCID:0000000253893565)↗
DOE OSTI2017

Electronic fitness function for screening semiconductors as thermoelectric materials

Here, we introduce a simple but efficient electronic fitness function (EFF) that describes the electronic aspect of the thermoelectric performance. This EFF finds materials that overcome the inverse relationship between σ and S based on the complexity of the electronic structures regardless of specific origin (e.g., isosurface corrugation, valley degeneracy, heavy-light bands mixture, valley anisotropy or reduced dimensionality). This function is well suited for application in high throughput screening. We applied this function to 75 different thermoelectric and potential thermoelectric materials including full- and half-Heuslers, binary semiconductors, and Zintl phases. We find an efficient screening using this transport function. The EFF identifies known high-performance p- and n-type Zintl phases and half-Heuslers. In addition, we find some previously unstudied phases with superior EFF.

36 MATERIALS SCIENCE↗