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At least 757 records · Page 42

NuGraph2 with context-aware inputs: physics-inspired improvements in semantic segmentation

Graph neural networks have recently shown strong promise for event reconstruction tasks in Liquid Argon Time Projection Chambers, yet their performance remains limited for underrepresented classes of particles, such as Michel electrons. In this work, we investigate physics-informed strategies to improve semantic segmentation within the NuGraph2 architecture. We explore three complementary approaches: (i) enriching the input representation with context-aware features derived from detector geometry and track continuity, (ii) introducing auxiliary decoders to capture class-level correlations, and (iii) incorporating energy-based regularization terms motivated by Michel electron energy distributions. Experiments on MicroBooNE public datasets show that physics-inspired feature augmentation yields the largest gains, particularly boosting Michel electron precision and recall by disentangling overlapping latent space regions. In contrast, auxiliary decoders and energy-regularization terms provided limited improvements, partly due to the hit-level nature of NuGraph2, which lacks explicit particle- or event-level representations. Our findings highlight that embedding physics context directly into node-level inputs is more effective than imposing task-specific auxiliary losses, and suggest that future hierarchical architectures such as NuGraph3, with explicit particle- and event-level reasoning, will provide a more natural setting for advanced decoders and physics-based regularization. The code for this work is publicly available on Github at https://github.com/vitorgrizzi/nugraph_phys/tree/main_phys.

Other Experiments↗

A collinear perspective on the Regge limit

The high energy (Regge) limit provides a playground for understanding all loop structures of scattering amplitudes, and plays an important role in the description of many phenomenologically relevant cross-sections. While well understood in the planar limit, the structure of non-planar corrections introduces many fascinating complexities, for which a general organizing principle is still lacking. We study the structure of multi-reggeon exchanges in the context of the effective field theory for forward scattering, and derive their factorization into collinear operators (impact factors) and soft operators. We derive the structure of the renormalization group consistency equations in the effective theory, showing how the anomalous dimensions of the soft operators are related to those of the collinear operators, allowing us to derive renormalization group equations in the Regge limit purely from a collinear perspective. The rigidity of the consistency equations provides considerable insight into the all orders organization of Regge amplitudes in the effective theory, as well as its relation to other approaches. Along the way we derive a number of technical results that improve the understanding of the effective theory. We illustrate this collinear perspective by re-deriving all the standard BFKL equations for two-Glauber exchange from purely collinear calculations, and we show that this perspective provides a number of conceptual and computational advantages as compared to the standard view from soft or Glauber physics. We anticipate that this formulation in terms of collinear operators will enable a better understanding of the relation between BFKL and DGLAP in gauge theories, and facilitate the analysis of renormalization group evolution equations describing Reggeization beyond next-to-leading order.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Hadronic mono- W ' probes of dark matter at colliders

Particle collisions at the energy frontier can probe the nature of invisible dark matter via production in association with recoiling visible objects. We propose a new potential production mode, in which dark matter is produced by the decay of a heavy dark Higgs boson radiated from a heavy W' boson. In such a model, motivated by left-right symmetric theories, dark matter would not be pair produced in association with other recoiling objects due to its lack of direct coupling to quarks or gluons. We study the hadronic decay mode via W' → tb and estimate the LHC exclusion sensitivity at 95% confidence level to be 10 2 - 10 5 fb for W' boson masses between 250 and 1750 GeV.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Exploring the holographic entropy cone via reinforcement learning

We develop a reinforcement learning algorithm to study the holographic entropy cone. Given a target entropy vector, our algorithm searches for a graph realization whose min-cut entropies match the target vector. If the target vector does not admit such a graph realization, it must lie outside the cone, in which case the algorithm finds a graph whose corresponding entropy vector most nearly approximates the target and allows us to probe the location of the facets. For the N = 3 cone, we confirm that our algorithm successfully rediscovers monogamy of mutual information beginning with a target vector outside the holographic entropy cone. We then apply the algorithm to the N = 6 cone, analyzing the 6 mystery extreme rays of the subadditivity cone from [1] that satisfy all known holographic entropy inequalities yet lacked graph realizations. We found realizations for 3 of them, proving they are genuine extreme rays of the holographic entropy cone, while providing evidence that the remaining 3 are not realizable, implying unknown holographic inequalities exist for N = 6.

AdS-CFT correspondence↗

Next-to-leading power endpoint factorization and resummation for off-diagonal “gluon” thrust

The lack of convergence of the convolution integrals appearing in next-to-leading-power (NLP) factorization theorems prevents the applications of existing methods to resum power-suppressed large logarithmic corrections in collider physics. We consider thrust distribution in the two-jet region for the flavour-nonsinglet off-diagonal contribution, where a gluon-initiated jet recoils against a quark-antiquark pair, which is power-suppressed. With the help of operatorial endpoint factorization conditions, we obtain a factorization formula, where the individual terms are free from endpoint divergences in convolutions and can be expressed in terms of renormalized hard, soft and collinear functions in four dimensions. This allows us to perform the first resummation of the endpoint-divergent SCETI observables at the leading logarithmic accuracy using exclusively renormalization-group methods. The presented approach relies on universal properties of the soft and collinear limits and may serve as a paradigm for the systematic NLP resummation for other 1 → 2 and 2 → 1 collider physics processes.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Quasi-sterile neutrinos from dark sectors. Part I. BSM matter effects in neutrino oscillations and the short-baseline anomalies.

Quasi-sterile neutrinos are a natural consequence of dark sectors interacting with the Standard Model (SM) sector via neutrino- and vector-portals. Essentially, quasi-sterile neutrinos are light dark sector fermions with two generic properties: (i) they mix with the active neutrinos of the SM, and (ii) they are charged under a vector mediator that couples feebly to SM matter. Various interesting phenomenological consequences result from this class of particles. In this article, we investigate one such consequence: new, beyond the SM matter effects that can alter in-medium neutrino oscillations. In particular, for special windows of energy and matter densities, active neutrinos can resonantly oscillate into sterile neutrinos. We take advantage of this feature to build a quasi-sterile neutrino model that can explain the MiniBooNE and LSND anomalies, while remaining compatible with observations from long-baseline reactor- and accelerator-based neutrino experiments. This model is also likely compatible with the recent results reported by the MicroBooNE collaboration (albeit we cannot precisely quantify this claim due to a lack of information in MicroBooNE’s public data releases to date). Implications for solar neutrinos and $ν_e$ disappearance searches are also briefly discussed.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Spontaneous CP violation and horizontal symmetry in the MSSM: toward lepton flavor naturalness

We study the contributions of supersymmetric models with a U(1) horizontal symmetry and only spontaneous CP breaking to various lepton flavor observables, such as μ → eγ and the electron electric dipole moment. We show that both a horizontal symmetry and a lack of explicit CP violation can alleviate the existing bounds from such observables. The undetermined \( \mathcal{O} \) (1) coefficients in such mass matrix models muddle the interpretation of the bounds from various flavor observables. To overcome this, we define a new fine-tuning measure for different observables in such setups. This allows us to study how naturally the observed IR flavor observables can emerge from a given mass matrix model. We use our flavor-naturalness measure in study of our supersymmetric models and quantify the degree of fine tuning required by the bounds from various lepton flavor observables at each mass scale of sleptons, neutralinos, and charginos.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

A flavor of SO(10) unification with a spinor Higgs

We investigate Higgs Parity unification — a realization of SO(10) grand unification based on the Higgs Parity mechanism in which the Standard Model (SM) Higgs resides in a spinor representation. The theory has an intermediate left-right symmetric stage where the SU(2)R symmetry breaking scale is fixed by the vanishing of the SM Higgs quartic coupling. The strong CP problem is solved by parity. Gauge coupling unification successfully predicts αs(MZ) to within 1%. The spinor Higgs naturally leads to a seesaw origin for SM flavor observables. We identify a novel mechanism where large mixing of third generation fermions with additional heavy vector-like fermions accounts for the anarchical nature of the PMNS matrix and the lack of hierarchy in the neutrino mass spectrum, relative to the up-quarks. A fit to quark and lepton masses and mixings, with a minimal parameter set, predicts 1) A testable relation between the top quark mass and αs(MZ) which is about (1 – 2)σ from current best fit values, 2) The order of magnitude of the baryon asymmetry of the universe, via leptogenesis from second-generation right-handed neutrino decays. 3) The proton decay and the neutron EDM are likely observable in next generation experiments, and 4) A normal ordered neutrino mass spectrum where 0νββ decay and the mass of the lightest neutrino are out of reach of next generation experiments.

Baryo-and Leptogenesis↗

Accidental suppression of Wilson coefficients in Higgs coupling

Higgs couplings are essential probes for physics beyond the Standard Model (BSM) since they can be modified by new physics, such as through the Higgs portal interaction |H| 2 Ο. These modifications influence Higgs interactions via dimension-6 operators of the form (∂|H| 2 ) 2 and |H| 6 , which are generally expected to be of comparable size. This paper discusses a phenomenon of accidental suppression, where the |H| 6 coupling is significantly smaller than (∂|H| 2 ) 2 . This suppression, arising from the truncation of the tree-level effective potential, lacks a clear symmetry explanation but persists in portal models. This paper aims to inspire further studies on additional instances of accidental suppression without symmetry explanations or a general framework to characterize such suppression. We also discuss constraints, at the HL-LHC and future colliders, on the Wilson coefficients of the two dimension-6 operators for various benchmark scenarios of the concrete model.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Quantitative trait locus mapping combined with variant and transcriptome analyses identifies a cluster of gene candidates underlying the variation in leaf wax between upland and lowland switchgrass ecotypes

Switchgrass (Panicum virgatum L.) is a promising warm-season candidate energy crop. It occurs in two ecotypes, upland and lowland, which vary in a number of phenotypic traits, including leaf glaucousness. To initiate trait mapping, two F 2 mapping populations were developed by crossing two different F 1 sibs derived from a cross between the tetraploid lowland genotype AP13 and the tetraploid upland genotype VS16, and high-density linkage maps were generated. Quantitative trait locus (QTL) analyses of visually scored leaf glaucousness and of hydrophobicity of the abaxial leaf surface measured using a drop shape analyzer identified highly significant colocalizing QTL on chromosome 7K (Chr07K). Using a multipronged approach, we identified a cluster of genes including Pavir.7KG077009, which encodes a Type III polyketide synthase-like protein, and Pavir.7KG013754 and Pavir.7KG030500, two highly similar genes that encode putative acyl-acyl carrier protein (ACP) thioesterases, as strong candidates underlying the QTL. The lack of homoeologs for any of the three genes on Chr07N, the relatively low level of identity with other switchgrass KCS proteins and thioesterases, as well as the organization of the surrounding region suggest that Pavir.7KG077009 and Pavir.7KG013754/Pavir.7KG030500 were duplicated into a fast-evolving chromosome region, which led to their neofunctionalization. Furthermore, sequence analyses showed all three genes to be absent in the two upland compared to the two lowland accessions analyzed. This study provides an example of and practical guide for trait mapping and candidate gene identification in a complex genetic system by combining QTL mapping, transcriptomics and variant analysis.

59 BASIC BIOLOGICAL SCIENCES↗

Assessing decision boundaries under uncertainty

In order to make design decisions, engineers may seek to identify regions of the design domain that are acceptable in a computationally efficient manner. A design is typically considered acceptable if its reliability with respect to parametric uncertainty exceeds the designer’s desired level of confidence. Despite major advancements in reliability estimation and in design classification via decision boundary estimation, the current literature still lacks a design classification strategy that incorporates parametric uncertainty and desired design confidence. To address this gap, this paper offers a novel interpretation of the acceptance region by defining the decision boundary as the hypersurface which isolates the designs that exceed a user-defined level of confidence given parametric uncertainty. This work addresses the construction of this novel decision boundary using computationally efficient algorithms that were developed for reliability analysis and decision boundary estimation. The approach proposed in this paper is verified on two physical examples from structural and thermal analysis using Support Vector Machines and Efficient Global Optimization-based contour estimation.

97 MATHEMATICS AND COMPUTING↗

Stress interference in multilayer additive friction stir deposition of AA6061 aluminum

Due to the multilayer deposition nature of metal additive manufacturing processes, each layer being printed experiences the state of thermokinetic and thermomechanical stress that in turn interfere with the state of thermokinetics and thermomechanical stress of subsequently deposited layers. Especially, this multilayer interference significantly affects the resultant properties of the component fabricated using solid-state additive friction stir deposition due to evolution of asymmetric state of planar stress. Due to the lack of comprehensive and suitable in situ diagnosis technique, the complex interference of inter- and multi-layer stresses during additive friction stir deposition was studied in an integrated approach of numerical simulation of fluidic state and experimental probing of stress influenced ultrasonic elastography. The uni-directional and bi-directional layer deposition configurations adopted during additive friction stir deposition result in the generation of constructive and destructive interference of the interlayer stress and hence, asymmetric and symmetric dynamic elasticity distribution respectively within the subsequent layers. With subsequent deposition of additional layers, the odd and even numbers of deposited layers generate asymmetric and nearly symmetric dynamic elasticity distributions.

Yang, Teng↗

Risk Assessment of Industrial Microbes Using a Terrestrial Mesocosm Platform

Abstract Industrial microbes and bio-derived products have emerged as an integral component of the bioeconomy, with an array of agricultural, bioenergy, and biomedical applications. However, the rapid development of microbial biotechnology raises concerns related to environmental escape of laboratory microbes, detection and tracking thereof, and resultant impact upon native ecosystems. Indeed, though wild-type and genetically modified microbes are actively deployed in industrial bioprocesses, an understanding of microbial interactivity and impact upon the environment is severely lacking. In particular, the persistence and sustained ecosystem impact of industrial microbes following laboratory release or unintentional laboratory escape remains largely unexplored. Herein, we investigate the applicability of soil-sorghum mesocosms for the ecological risk assessment of the industrial microbe, Saccharomyces cerevisiae . We developed and applied a suite of diagnostic and bioinformatic analyses, including digital droplet PCR, microscopy, and phylogenomic analyses to assess the impacts of a terrestrial ecosystem perturbation event over a 30-day time course. The platform enables reproducible, high-sensitivity tracking of S. cerevisiae in a complex soil microbiome and analysis of the impact upon abiotic soil characteristics and soil microbiome population dynamics and diversity. The resultant data indicate that even though S. cerevisiae is relatively short-lived in the soil, a single perturbation event can have sustained impact upon mesocosm soil composition and underlying microbial populations in our system, underscoring the necessity for more comprehensive risk assessment and development of mitigation and biocontainment strategies in industrial bioprocesses.

09 BIOMASS FUELS↗

Bacterial α-diglucoside metabolism: perspectives and potential for biotechnology and biomedicine

In a competitive microbial environment nutrient acquisition is a major contributor to the survival of any individual bacterial species, and the ability to access uncommon energy sources can provide a fitness advantage. One set of soluble carbohydrates that have attracted increased attention for use in biotechnology and biomedicine are the α-diglucosides. Maltose is the most well studied member of this class, however the remaining four less common α-diglucosides (trehalose, kojibiose, nigerose, and isomaltose) are increasingly used in processed food and fermented beverages. The consumption of trehalose has recently been shown to be a contributing factor in gut microbiome disease as certain pathogens are using α-diglucosides to outcompete native gut flora. Kojibiose and nigerose have also been examined potential prebiotics and alternative sweeteners for a variety of foods. Compared to the study of maltose metabolism our understanding of the synthesis and degradation of uncommon α-diglucosides is lacking and several fundamental questions that remain unanswered, particularly in regards to the regulation of bacterial metabolism for α-diglucosides. Therefore this minireview attempts to provide a focused analysis of uncommon α-diglucoside metabolism in bacteria, and suggests some future directions for this research area that could potentially accelerate biotechnology and biomedicine developments.

59 BASIC BIOLOGICAL SCIENCES↗

Major involvement of two laccase genes in conidial pigment biosynthesis in Aspergillus oryzae

Wild-type strains of Aspergillus oryzae develop yellow, yellow-green, green, or brown conidia. Previous reports suggested that the conidiation initiates with the biosynthesis of a yellow pigment YWA1 from acetyl-CoA by a polyketide synthase encoded by wA (AO090102000545). This is followed by the conversion to other pigment by a laccase encoded by yA (AO090011000755). Based on orthologous pathways in other aspergilli, it is reasonable to hypothesize that in addition to yA, AO090102000546 encoding laccase and AO090005000332 encoding Ayg1-like hydrolase play a role in A. oryzae conidial pigment biosynthesis. However, the involvement of these two genes in conidial pigmentation remains unclear. In this study, we tested this hypothesis by assessing the conidial colors of both disruption and overexpression mutants to verify whether AO090102000546 and AO090005000332 were associated with the conidial pigmentation. Here, observation of single, double, and triple disruptants of these three genes suggested that conidial pigments were synthesized by two laccase genes, AO090011000755 and AO090102000546, whereas Ayg1-like hydrolase gene AO090005000332 was proven to have no obvious association with the synthesis. This was corroborated by observing the phenotype of each overexpression mutant. Interestingly, AO090005000332 overexpression mutant produced smoky yellow-green conidia, different from the wild-type strain. Thus, the AO090005000332-encoded protein is likely to maintain the enzymatic activity. However, the expression level was observed to be one-third of that of AO090102000546 and one-seventh of that of AO090011000755. Consequently, apparent lack of obvious contribution of AO090005000332 to conidial pigmentation could be attributed to its low expression level. Expression analysis indicated similar profiles in several wild-type strains.

59 BASIC BIOLOGICAL SCIENCES↗

High-speed volumetric imaging of formaldehyde in a lifted turbulent jet flame using an acousto-optic deflector

The development of high-speed volumetric laser-induced fluorescence measurements of formaldehyde (CH 2 O-LIF) using a pulse-burst laser operated at a repetition rate of 100 kHz is presented here. A novel laser scanning system employing an acousto-optic deflector (AOD) enables quasi-4D CH 2 O-LIF imaging at a scan frequency of 10 kHz. The diagnostic capability of time-resolved volumetric imaging is demonstrated in a partially premixed DME/air lifted turbulent jet flame near the flame base. Simultaneous imaging of laser beam profiles is performed to account for the laser pulse energy fluctuation and laser sheet inhomogeneity. With the accurate registration of laser sheet positions, the volumetric reconstruction of CH 2 O-LIF signals is performed within a detection volume of 17.3 × 11.9 × 2.3 mm 3 with an average out-of-plane spatial resolution of 250μm. A surface detection algorithm with adaptive thresholding is used to determine the global maximum intensity gradient by calculating gradient percentiles. The flame topology characteristics are investigated by evaluating the 3D curvatures of CH 2 O surfaces. Curvatures calculated using 2D data systematically underestimate the full 3D curvature due to the lack of out-of-plane information. The inner surfaces near the turbulent fuel jet exhibit higher probabilities of large mean curvature than the outer surfaces. The saddle and cylindrical structures are dominant on both the inner and outer surfaces and the elliptic structures occur with lower probability. The results suggest that the damping of turbulent fluctuations by the temperature increase through the CH 2 O region reduces the curvature, but the local structure topology remains self-similar.

42 ENGINEERING↗

Changes in soil pore structure generated by the root systems of maize , sorghum and switchgrass affect in situ N 2 O emissions and bacterial denitrification

Due to the heterogeneous nature of soil pore structure, processes such as nitrification and denitrification can occur simultaneously at microscopic levels, making prediction of small-scale nitrous oxide (N 2 O) emissions in the field notoriously difficult. We assessed N 2 O+N 2 emissions from soils under maize (Zea mays L.), switchgrass (Panicum virgatum L.), and energy sorghum (Sorghum bicolor L.), three potential bioenergy crops in order to identify the importance of different N 2 O sources to microsite production, and relate N 2 O source differences to crop-associated differences in pore structure formation. The combination of isotopic surveys of N 2 O in the field during one growing season and X-ray computed tomography (CT) enabled us to link results from isotopic mappings to soil structural properties. Further, our methodology allowed us to evaluate the potential for in situ N 2 O suppression by biological nitrification inhibition (BNI) in energy sorghum. Our results demonstrated that the fraction of N 2 O originating from bacterial denitrification and reduction of N 2 O to N 2 is largely determined by the volume of particulate organic matter occluded within the soil matrix and the anaerobic soil volume. Bacterial denitrification was greater in switchgrass than in the annual crops, related to changes in pore structure caused by the coarse root system. This led to high N-loses through N 2 emissions in the switchgrass system throughout the season a novel finding given the lack of data in the literature for total denitrification. Isotopic mapping indicated no differences in N 2 O-fluxes or their source processes between maize and energy sorghum that could be associated with the release of BNI by the investigated sorghum variety. The results of this research show how differences in soil pore structures among cropping systems can determine both N 2 O production via denitrification and total denitrification N losses in situ.

59 BASIC BIOLOGICAL SCIENCES↗

Towards understanding the robust strengthening of ENSO and more frequent extreme El Niño events in CMIP6 global warming simulations

The El Niño Southern Oscillation (ENSO) has profound impacts on weather patterns across the globe, yet there is no consensus on its response to global warming. Several modelling studies find a stronger ENSO in global warming scenarios, while other studies suggest ENSO weakening. Using a broad range of models from the Coupled Model Intercomparison Project phase 6 (CMIP6) and four types of warming experiments, here we show that the majority of the models predict a stronger ENSO by century-end in Shared Social Pathway (SSP) experiments, and in idealized 1pctCO 2 and abrupt 4xCO 2 experiments. Several models, however, do predict no change or ENSO weakening, especially in the idealized experiments. Critically, the strongest forcing (abrupt-4xCO 2 ) does not induce the strongest ENSO response, while differences between the models are much greater than those between warming scenarios. For the long-term response (over 1000 years) the models disagree even on the sign of change. Furthermore, changes in ENSO sea surface temperature (SST) variability are only modestly correlated with the tropical Pacific mean state change. The highest correlation for ENSO SST amplitude is found with the mean zonal SST gradient in the SSP5-8.5 experiment (R = –0.58). In contrast, changes in ENSO rainfall variability correlate well with changes in the mean state, as well as with changes in ENSO SST variability. When evaluating the Bjerknes Stability Index for a subset of models, we find that it is not a reliable predictor of ENSO strengthening, as this index tends to predict greater stability with warming. We argue that the enhanced ENSO stability is offset by increases in atmospheric noise or/and potential nonlinear effects. However, a robust inter-model mechanism that can explain a stronger ENSO simulated with global warming is still lacking. Therefore, caution should be exercised when considering ENSO changes based on a single model or warming scenario.

54 ENVIRONMENTAL SCIENCES↗