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At least 757 records · Page 42

Pervasive shifts in forest dynamics in a changing world

Forest dynamics arise from the interplay of environmental drivers and disturbances with the demographic processes of recruitment, growth, and mortality, subsequently driving biomass and species composition. However, forest disturbances and subsequent recovery are shifting with global changes in climate and land use, altering these dynamics. Changes in environmental drivers, land use, and disturbance regimes are forcing forests toward younger, shorter stands. Rising carbon dioxide, acclimation, adaptation, and migration can influence these impacts. Recent developments in Earth system models support increasingly realistic simulations of vegetation dynamics. In parallel, emerging remote sensing datasets promise qualitatively new and more abundant data on the underlying processes and consequences for vegetation structure. In combination, these advances hold promise for improving the scientific understanding of changes in vegetation demographics and disturbances.

54 ENVIRONMENTAL SCIENCES↗

Effects of Vegetation and Topography on the Boundary Layer Structure above the Amazon Forest

Observational data from two field campaigns in the Amazon forest were used to study the vertical structure of turbulence above the forest. The analysis was performed using the reduced turbulent kinetic energy (TKE) budget and its associated two-dimensional phase space. Results revealed the existence of two regions within the roughness sublayer in which the TKE budget cannot be explained by the canonical flat-terrain TKE budgets in the canopy roughness sublayer or in the lower portion of the convective ABL. Data analysis also suggested that deviations from horizontal homogeneity have a large contribution to the TKE budget. Results from LES of a model canopy over idealized topography presented similar features, leading to the conclusion that flow distortions caused by topography are responsible for the observed features in the TKE budget. These results support the conclusion that the boundary layer above the Amazon forest is strongly impacted by the gentle topography underneath.

54 ENVIRONMENTAL SCIENCES↗

16S and ITS Amplicon Sequencing Fastq files and metadata from PARCHED Panama Tropical Forest soils, 2019-2020,

Model projections predict tropical forests will experience longer periods of drought and more intense precipitation cycles under a changing climate. Such transitions have implications for structure-function relationships within microbial communities. We examine how chronic drying might reshape prokaryotic and fungal communities across four lowland forests in Panama with a wide variation in mean annual precipitation and soil fertility. Four sites were established across a 1000 mm span in mean annual precipitation (2335 to 3300 mm). We expected microbial communities at sites with lower MAP to be less sensitive to chronic drying than sites with higher MAP; while fungal communities to be more resistant to disturbance than prokaryotes. At each location, partial throughfall exclusion structures were established over 10 x 10 m plots to reduce direct precipitation input. Raw demultiplexed sequences (bacteria, archaea, fungal) from soil samples taken from PARCHED Panama Tropical Forest throughfall exclusion experiments. Files that contain 16S are sequences from prokaryotes, ITS indicates sequences from fungi. Compressed fastq files are contained in Field_PARCHED_ITS_fastq_2020.zip, Field_PARCHED_ITS_fastq_2019.zip, Field_PARCHED_16S_fastq_2020.zip, Field_PARCHED_16S_fastq_2019.zip.There are four sites across the isthmus of Panama, each with 4 control and 4 exclusion plots. Throughfall exclusion shelters were built to intercept 50% of throughfall precipitation that hits the soil. Samples were taken on May 2019 and Jan 2020 from 0-10 cm and 10-20 cm depth approximately 9 and 18 months after shelter installation. Metadata and sample IDs for fastq files for 2019 sampling are within Field_PARCHED_Metadata_2019_ITS.csv and Field_PARCHED_Metadata_2019_16S.csv. The metadata for both 16S and ITS fastq files for January 2020 is included in Field_PARCHED_Metadata_2020.csv. No data processing or QA/QC was done on the raw data. Data processing example provided in R notebook file.

54 ENVIRONMENTAL SCIENCES↗

GNSS-based Vegetation Optical Depth, Tree Sway, and Evapotranspiration data from the Niwot Ridge Subalpine Forest (US-NR1) AmeriFlux site

This data package contains data and information about Global Navigation Satellite System (GNSS)-based Vegetation Optical Depth (VOD), tree sway motion, and eddy-covariance evapotranspiration (ET) data collected at the Niwot Ridge Subalpine Forest AmeriFlux site (US-NR1). The raw GNSS data were collected between May 2022 and August 2023. Other processed datasets such as tree sway motion and ET data are also included. The goal was to study the water content within a subalpine forest and, more specifically, examine the canopy evaporation process. This data archive includes all data that were used within the following Biogeosciences discussion paper that further summarizes the research objectives and conclusions:Burns, S.P., V. Humphrey, E.D. Gutmann, M.S. Raleigh, D.R. Bowling, and P.D. Blanken, 2025: Using GNSS-based vegetation optical depth, tree sway motion, and eddy-covariance to examine evaporation of canopy-intercepted rainfall in a subalpine forest. EGUsphere [preprint],https://doi.org/10.5194/egusphere-2025-1755This data archive also supplements the 30-min Lawrence Berkeley National Laboratory (LBNL) AmeriFlux dataset for US-NR1 (i.e., https://doi.org/10.17190/AMF/1246088) and updates what was in the 2020 ESS-DIVE US-NR1 archive (https://doi.org/10.15485/1671825) to include data from the years 2020-2025. More specifically, the following updates are provided: (i) five-minute statistics (means, variances, covariances) of all data measured by the US-NR1 data system between Sep 2020 and Jun 2025 in netCDF format, (ii) the electronic logbook of US-NR1 site visits, (iii) a web calendar (in HTML format) documenting activity at the site (a replica of https://urquell.colorado.edu/calendar/), (iv) photos taken at the site between years 2020 and present day (Aug 2025), and (v) several auxiliary datasets, primary related to trees near the site, soil properties, soil moisture and soil temperature, and subcanopy radiation data. The data package is setup so that the web calendar, photos, and electronic logbook can be easily accessed on a local computer using a web browser. The provided data files are in either BINEX or SBF format (for the raw GNSS data), netCDF, CSV, ASCII, or MATLAB format. To obtain a better understanding about the archive, please start by reading the following PDF which is included within the data archive:README_ESS_DIVE_USNR1_2025_readme_first.pdf.

54 ENVIRONMENTAL SCIENCES↗

AmeriFlux FLUXNET-1F CA-SF3 Saskatchewan - Western Boreal, forest burned in 1998

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site CA-SF3 Saskatchewan - Western Boreal, forest burned in 1998. This is the FLUXNET version of the carbon flux data for the site CA-SF3 Saskatchewan - Western Boreal, forest burned in 1998 produced by applying the standard ONEFlux (1F) software. Site Description - The 1998 burn site (F98) was in the east part of Prince Albert National Park, Saskatchewan, in the Waskesiu Fire, ignited by lightning that burned about 1700 ha in July 1998. The pre-fire forest consisted of jack pine and black spruce stands, with some intermixed aspen. The fire was severe, consuming much of the top layer of organic soil and killing all trees. In 2001, much of the regenerating vegetation consisted of aspen saplings about 1 m tall and shorter jack pine and black spruce seedlings. An overstory of dead, leafless jack pine trees dominated at a height of 18 m. Sparse grass and herbs, such as fireweed (Epilobium angustifolium L.) covered the ground. There were a large number of fallen dead trees, mostly perched above the ground and not decomposing quickly.

Amiro, Brian [University of Manitoba; Canadian For↗

AmeriFlux FLUXNET-1F US-Dk1 Duke Forest-open field

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Dk1 Duke Forest-open field. This is the FLUXNET version of the carbon flux data for the site US-Dk1 Duke Forest-open field produced by applying the standard ONEFlux (1F) software. Site Description - The Duke Forest grass field is approximately 480×305 m, dominated by the C3 grass Festuca arundinacea Shreb. (tall fescue) includes minor components of C3 herbs and the C4 grass Schizachyrium scoparium (Michx.) Nash, not considered here. The site was burned in 1979 and is mowed annually during the summer for hay according to local practices. Lai, C.T. and G.G. Katul, 2000, "The dynamic role of root-water uptake in coupling potential to actual transpiration" , Advances in Water Resources, 23, 427-439; Novick , K.A., P. C. Stoy, G. G. Katul, D. S. Ellsworth, M. B. S. Siqueira, J. Juang, R. Oren, 2004, Carbon dioxide and water vapor exchange in a warm temperate grassland, Oecologia, 138, 259-274; Stoy PC, Katul GG, Siqueira MBS, Juang J-Y, McCarthy HR, Oishi AC, Uebelherr JM, Kim H-S, Oren R (2006). Separating the effects of climate and vegetation on evapotranspiration along a successional chronosequence in the southeastern U.S. Global Change Biology 12:2115-2135

Oishi, Chris [USDA Forest Service]↗

AmeriFlux FLUXNET-1F US-Dk2 Duke Forest-hardwoods

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Dk2 Duke Forest-hardwoods. This is the FLUXNET version of the carbon flux data for the site US-Dk2 Duke Forest-hardwoods produced by applying the standard ONEFlux (1F) software. Site Description - private land adjacent to the Duke Forest in November 2002

Oishi, Chris [USDA Forest Service]↗

AmeriFlux FLUXNET-1F US-Dk3 Duke Forest - loblolly pine

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Dk3 Duke Forest - loblolly pine. This is the FLUXNET version of the carbon flux data for the site US-Dk3 Duke Forest - loblolly pine produced by applying the standard ONEFlux (1F) software. Site Description - The site was established in 1983 following a clear cut and a burn. Pinus taeda L. (loblolly pine) seedlings were planted at 2.4m by 2.4m spacing and ecosystem development has not been managed after planting. Canopy height increased from 16m in 2001 to 18m in 2004. The canopy is comprised primarily of P. taeda with some emergent Liquidambar styraciflua L. and a diverse and growing understory with 26 different woody species of diameter breast height 42.5 cm. The flux tower lies upwind of the CO2-enriched components of the free atmosphere carbon enrichment (FACE) facility located in the same pine forest. EC instrumentation is at 20.2m on a 22m tower.

Oishi, Chris [USDA Forest Service]↗

AmeriFlux FLUXNET-1F US-Ho3 Howland Forest (harvest site)

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Ho3 Howland Forest (harvest site). This is the FLUXNET version of the carbon flux data for the site US-Ho3 Howland Forest (harvest site) produced by applying the standard ONEFlux (1F) software. Site Description - Closed conifer forest, minimal disturbance. References: Fernandez et al. (1993), Canadian Journal of Soil Science 73 317-328. Hollinger et al. (1999), Global Change Biology 5: 891-902. Savage KE, Davidson EA (2001), Global Biogeochemical Cycles 15 337-350. Scott et al. (2004), Environmental Management, Vol. 33, Supplement 1, pp. S9-S22. Hollinger et al. (2004), Global Change Biology 10: 1689-1706.

Ouimette, Andrew [USDA Forest Service]↗

Protecting Biodiversity through Forest Management: Lessons Learned and Strategies for Success

The strong links among biodiversity, forests, and climate change require that forces affecting them be addressed simultaneously. Here we summarize findings and lessons learned from decades of field work exploring ways to balance conservation with development, while effectively addressing drivers of deforestation and biodiversity loss. Examples are provided for approaches to forest management that support both biodiversity conservation and greenhouse gas mitigation. Causes of deforestation are reviewed and recommendations provided for specific steps that would slow the loss of high conservation-value forests.

54 ENVIRONMENTAL SCIENCES↗

Litter Production of Oak-Hickory Forest at Missouri Ozark (MOFLUX) Site: 2003-2022

This dataset contains measurements of litter production at the second-growth upland oak-hickory forest at the Missouri Ozark AmeriFlux (MOFLUX) site. The MOFLUX site is located in the University of Missouri Baskett Forest situated in the Ozark Border Region of central Missouri, USA, and is part of the AmeriFlux network (site ID: US-MOz). During 2003, 24 circular vegetation plots (each 0.08 hectares) were established in the MOFLUX forest. The plots were situated 50 meters apart on 5 linear transects radiating out from the flux tower base in southeast, south, southwest, west, and northwest directions—there were 5 plots per transect except for the northwest one, which had only 4 due to the presence of a small pond at the terminus (Fig. 1). Litter measurements were initiated in October 2003 and continue to the present. Data through 2022 are reported in this dataset. On each plot, two subplots were established for the collection of litter. Subplots were setup using a stratified random design to ensure the collectors were not immediately adjacent to one another. Litter collectors were usually emptied at monthly intervals, or less during the autumn leaf drop. Samples were dried to constant mass and then sorted before determining the dry mass of leaf, vegetative and woody litter. These litter data have been valuable in modeling efforts to examine the impacts of intensifying moisture extremes (i.e., moisture excess and deficit conditions) on soil carbon cycling. More recent data will be added periodically with no changes to previously released data or the format and structure of the data file. This dataset contains one data file in comma separate (.csv) format. Additional metadata are provided: one data dictionary and a file-level metadata file in comma separate (.csv) format and a user guide in PDF (*.pdf) format.

54 ENVIRONMENTAL SCIENCES↗

Editorial: Resolving atmospheric flow in complex environments: recent experiments in terrain and forest canopies

The characterization of atmospheric flows in complex environments, which may include steep terrain slopes and heterogeneous vegetation and/or forest cover, is a long-standing challenge in boundary-layer meteorology. Atmospheric observations are complicated by the presence of transient, terrain-induced flow features, forest-canopy-atmosphere interactions, and atmospheric stability effects, not to mention the logistical hurdles involved with instrument deployment, data analysis, and quality control. Furthermore, challenges in atmospheric modeling arise due to numerical errors associated with complex terrain flows, as well as reliance on simplified parameterizations for unresolved processes such as turbulent mixing and land-surface or forest-canopy-atmosphere interactions. These modeling challenges are exacerbated in the so-called “gray zone,” wherein features of interest have length scales that are similar to the model grid spacing, or when the principal flow layer is smaller than the grid spacing (e.g., slope flows).

54 ENVIRONMENTAL SCIENCES↗

Near-Complete Sampling of Forest Structure from High-Density Drone Lidar Demonstrated by Ray Tracing

Drone lidar has the potential to provide detailed measurements of vertical forest structure throughout large areas, but a systematic evaluation of unsampled forest structure in comparison to independent reference data has not been performed. Here, we used ray tracing on a high-resolution voxel grid to quantify sampling variation in a temperate mountain forest in the southwest Czech Republic. We decoupled the impact of pulse density and scan-angle range on the likelihood of generating a return using spatially and temporally coincident TLS data. We show three ways that a return can fail to be generated in the presence of vegetation: first, voxels could be searched without producing a return, even when vegetation is present; second, voxels could be shadowed (occluded) by other material in the beam path, preventing a pulse from searching a given voxel; and third, some voxels were unsearched because no pulse was fired in that direction. We found that all three types existed, and that the proportion of each of them varied with pulse density and scan-angle range throughout the canopy height profile. Across the entire data set, 98.1% of voxels known to contain vegetation from a combination of coincident drone lidar and TLS data were searched by high-density drone lidar, and 81.8% of voxels that were occupied by vegetation generated at least one return. By decoupling the impacts of pulse density and scan angle range, we found that sampling completeness was more sensitive to pulse density than to scan-angle range. There are important differences in the causes of sampling variation that change with pulse density, scan-angle range, and canopy height. Our findings demonstrate the value of ray tracing to quantifying sampling completeness in drone lidar.

47 OTHER INSTRUMENTATION↗

(abstract) Using an Inversion Algorithm to Retrieve Parameters and Monitor Changes over Forested Areas from SAR Data

In this work, the application of an inversion algorithm based on a nonlinear opimization technique to retrieve forest parameters from multifrequency polarimetric SAR data is discussed. The approach discussed here allows for retrieving and monitoring changes in forest parameters in a quantative and systematic fashion using SAR data. The parameters to be inverted directly from the data are the electromagnetic scattering properties of the forest components such as their dielectric constants and size characteristics. Once these are known, attributes such as canopy moisture content can be obtained, which are useful in the ecosystem models.

forest canopy SAR data algorithm radar scattering ↗

Comparison of Forest Parameter Estimation Techniques Using SAR Data

It is important to monitor forests in order to understand the impacts of global climate changes on terrestrial ecosystems. To characterize the forest changes, it is useful to parameterize a forest using several parameters.

SAR polarimetry SAR interferometry forest paramete↗

Forest Attributes from Radar Interferometric Structure and its Fusion with Optical Remote Sensing

The possibility of global, three-dimensional remote sensing of forest structure with interferometric synthetic aperture radar (InSAR) bears on important forest ecological processes, particularly the carbon cycle. InSAR supplements two-dimensional remote sensing with information in the vertical dimension. Its strengths in potential for global coverage complement those of lidar (light detecting and ranging), which has the potential for high-accuracy vertical profiles over small areas. InSAR derives its sensitivity to forest vertical structure from the differences in signals received by two, spatially separate radar receivers. Estimation of parameters describing vertical structure requires multiple-polarization, multiple-frequency, or multiple-baseline InSAR. Combining InSAR with complementary remote sensing techniques, such as hyperspectral optical imaging and lidar, can enhance vertical-structure estimates and consequent biophysical quantities of importance to ecologists, such as biomass. Future InSAR experiments will supplement recent airborne and spaceborne demonstrations, and together with inputs from ecologists regarding structure, they will suggest designs for future spaceborne strategies for measuring global vegetation structure.

InSAR↗

Combined Use of Airborne Lidar and DBInSAR Data to Estimate LAI in Temperate Mixed Forests

The objective of this study was to determine whether leaf area index (LAI) in temperate mixed forests is best estimated using multiple-return airborne laser scanning (lidar) data or dual-band, single-pass interferometric synthetic aperture radar data (from GeoSAR) alone, or both in combination. In situ measurements of LAI were made using the LiCor LAI-2000 Plant Canopy Analyzer on 61 plots (21 hardwood, 36 pine, 4 mixed pine hardwood; stand age ranging from 12-164 years; mean height ranging from 0.4 to 41.2 m) in the Appomattox-Buckingham State Forest, Virginia, USA. Lidar distributional metrics were calculated for all returns and for ten one meter deep crown density slices (a new metric), five above and five below the mode of the vegetation returns for each plot. GeoSAR metrics were calculated from the X-band backscatter coefficients (four looks) as well as both X- and P-band interferometric heights and magnitudes for each plot. Lidar metrics alone explained 69% of the variability in LAI, while GeoSAR metrics alone explained 52%. However, combining the lidar and GeoSAR metrics increased the R2 to 0.77 with a CV-RMSE of 0.42. This study indicates the clear potential for X-band backscatter and interferometric height (both now available from spaceborne sensors), when combined with small-footprint lidar data, to improve LAI estimation in temperate mixed forests.

leaf area index↗

Global Characterization and Monitoring of Forest Cover Using Landsat Data: Opportunities and Challenges

The compilation of global Landsat data-sets and the ever-lowering costs of computing now make it feasible to monitor the Earth's land cover at Landsat resolutions of 30 m. In this article, we describe the methods to create global products of forest cover and cover change at Landsat resolutions. Nevertheless, there are many challenges in ensuring the creation of high-quality products. And we propose various ways in which the challenges can be overcome. Among the challenges are the need for atmospheric correction, incorrect calibration coefficients in some of the data-sets, the different phenologies between compilations, the need for terrain correction, the lack of consistent reference data for training and accuracy assessment, and the need for highly automated characterization and change detection. We propose and evaluate the creation and use of surface reflectance products, improved selection of scenes to reduce phenological differences, terrain illumination correction, automated training selection, and the use of information extraction procedures robust to errors in training data along with several other issues. At several stages we use Moderate Resolution Spectroradiometer data and products to assist our analysis. A global working prototype product of forest cover and forest cover change is included.

Global↗