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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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Synthesis parametry of ensemble-averaged second- order polynomial approximation to performance index of optimal guidance linear feedback control system
ABSTRACT Cdt1 is a mixed folded protein critical for DNA replication licensing and it also has a “moonlighting” role at the kinetochore via direct binding to microtubules and the Ndc80 complex. However, it is unknown how the structure and conformations of Cdt1 could allow it to participate in these multiple, unique sets of protein complexes. While robust methods exist to study entirely folded or unfolded proteins, structure–function studies of combined, mixed folded/disordered proteins remain challenging. In this work, we employ orthogonal biophysical and computational techniques to provide structural characterization of mitosis‐competent human Cdt1. Thermal stability analyses shows that both folded winged helix domains1 are unstable. CD and NMR show that the N‐terminal and linker regions are intrinsically disordered. DLS shows that Cdt1 is monomeric and polydisperse, while SEC‐MALS confirms that it is monomeric at high concentrations, but without any apparent inter‐molecular self‐association. SEC‐SAXS enabled computational modeling of the protein structures. Using the program SASSIE, we performed rigid body Monte Carlo simulations to generate a conformational ensemble of structures. We observe that neither fully extended nor extremely compact Cdt1 conformations are consistent with SAXS. The best‐fit models have the N‐terminal and linker disordered regions extended into the solution and the two folded domains close to each other in apparent “folded over” conformations. We hypothesize the best‐fit Cdt1 conformations could be consistent with a function as a scaffold protein that may be sterically blocked without binding partners. Our study also provides a template for combining experimental and computational techniques to study mixed‐folded proteins.
Abstract Climate models are critical tools to study earth system processes and are often further downscaled to provide refined‐resolution data sets for regional water‐energy impact analyses. In this study, the Variable‐Resolution Community Earth System Model (VR‐CESM), a new dynamical downscaling method, is employed to generate 1/8° simulations for China and the western United States over 1970–2006. Precipitation, temperature, snowpack, radiation, and wind speed are compared with two 1° global climate models, regional climate model ensemble, and reference data sets to evaluate their fidelity. Simulated precipitation skill is dependent upon the reference data sets used, a slight (<+10%) and spatially consistent wet bias in China during summer and the western United States during winter. Precipitation bias in VR‐CESM is the smallest among models and demonstrates the added value provided by resolution refinement. However, temperature biases are generally greater than precipitation due to more complicated interactions among processes. VR‐CESM simulates +2°C warm bias in the low‐elevation regions in China but −2°C cold bias in mountains. However, DJF cold bias (−2.23°C to−3.37°C) and JJA warm bias (+1.13°C to +1.87°C) exist in the western United States. The modeling skills of precipitation and temperature at various topographies are similar in the two evaluated regions. The cold bias was likely affected by downward shortwave radiation deficit (−15%) and slow bias of surface wind speeds (−16% to −29%). Despite the wet and cold bias, snow water equivalent and snow cover are underestimated in mountains. We conclude that VR‐CESM outperforms other models evaluated and provides the best estimation of downscaled climate model data for water‐energy studies.
Abstract Although societally important, extreme precipitation is difficult to represent in climate models. This study shows one robust aspect of extreme precipitation across models: extreme precipitation over tropical oceans is strengthened through a positive feedback with cloud-radiative effects. This connection is shown for a multi-model ensemble with experiments that make clouds transparent to longwave radiation. In all cases, tropical extreme precipitation reduces without cloud-radiative effects. Qualitatively similar results are presented for one model using the cloud-locking method to remove cloud feedbacks. The reduced extreme precipitation without cloud-radiative feedbacks does not arise from changes in the mean climate. Rather, evidence is presented that cloud-radiative feedbacks enhance organization of convection and most extreme precipitation over tropical oceans occurs within organized systems. This result suggests that climate models must correctly predict cloud structure and properties, as well as capture the essence of organized convection in order to accurately represent extreme rainfall.
Knowledge of the local coordination environment around atomic species in functional materials is critical for understanding their mechanisms of operation. Heterogeneous mixtures of metal complexes are ubiquitous in catalysts, ionic liquids, molten salts, biological enzymes, and geochemical systems, among many others. Extracting information from ensemble-average measurements about the structural and compositional descriptors of each type of coordination complex comprising the mixture is not generally possible, especially when they possess multimodal bond-length distributions. Here, we developed a method that enables the mapping of an x-ray absorption spectrum on the radial distribution function describing the average environment of the metal ions. The supervised neural network based method utilizes an objective training set, for which the choice of the local structural motifs is completely agnostic to the theoretically expected structure and dynamics of the modeled system. The method was validated using first-principles modeling of structural dynamics of nickel complexation in molten salts, and it applies to a large class of heterogeneous systems, including those studied under in situ and operando conditions.
Deep learning models are efficient computational tools that can accelerate the inverse design of molecules with desired functional properties by generating predictions at a fraction of the time required by traditional quantum chemical approaches. To ensure that a model maintains accuracy and transferability across broad regions of the chemical space explored during the inverse design, it must be trained on massively large volumes of simulation data. This requires running large-scale ensemble quantum chemical calculations on high-performance computing (HPC) systems for data collection. However, the efficient execution of such large ensemble calculations and the management of large volumes of output data require tools that can judiciously utilize computational resources and manage metadata overhead on the file system. Therefore, we present a high-performance, scalable, ensemble management framework for performing data-intensive quantum chemical electronic structure calculations for organic molecules. This framework provides abstractions to plug different ab initio, first principles, and first principles-based semi-empirical methods and executes them efficiently at large scale on HPC systems. It dynamically distributes tasks to resources and uses tiered storage for managing large collections of files. We employed this framework to process over ten million organic molecules and generate open-source datasets that provide UV-vis absorption spectra by running time-dependent density-functional tight-binding calculations. It is the largest database containing molecular optical spectra that were simulated with quantum chemical methods in a consistent manner.
Abstract This study focuses on assessing the representation and predictability of North American weather regimes, which are persistent large-scale atmospheric patterns, in a set of initialized subseasonal reforecasts created using the Community Earth System Model, version 2 (CESM2). The k -means clustering was used to extract four key North American (10°–70°N, 150°–40°W) weather regimes within ERA5 reanalysis, which were used to interpret CESM2 subseasonal forecast performance. Results show that CESM2 can recreate the climatology of the four main North American weather regimes with skill but exhibits biases during later lead times with overoccurrence of the West Coast high regime and underoccurrence of the Greenland high and Alaskan ridge regimes. Overall, the West Coast high and Pacific trough regimes exhibited higher predictability within CESM2, partly related to El Niño. Despite biases, several reforecasts were skillful and exhibited high predictability during later lead times, which could be partly attributed to skillful representation of the atmosphere from the tropics to extratropics upstream of North America. The high predictability at the subseasonal time scale of these case-study examples was manifested as an “ensemble realignment,” in which most ensemble members agreed on a prediction despite ensemble trajectory dispersion during earlier lead times. Weather regimes were also shown to project distinct temperature and precipitation anomalies across North America that largely agree with observational products. This study further demonstrates that unsupervised learning methods can be used to uncover sources and limits of subseasonal predictability, along with systematic biases present in numerical prediction systems. Significance Statement North American weather regimes are large-scale atmospheric patterns that can persist for several days. Their skillful subseasonal (2 weeks or greater) prediction can provide valuable lead time to prepare for temperature and precipitation anomalies that can stress energy and water resources. The purpose of this study was to assess the climatological representation and subseasonal predictability of four key North American weather regimes using a research subseasonal prediction system and clustering analysis. We found that the Pacific trough and West Coast high regimes exhibited higher predictability than other regimes and that skillful representation of conditions across the tropics and extratropics can increase predictability during later lead times. Future work will quantify causal pathways associated with high predictability.
Atmospheric rivers (ARs) are long, narrow synoptic scale features that act as moisture transport vehicles by moving water vapor poleward. They are typically found in storm tracks and often have profound implications for regional hydroclimate. For high latitude locales such as Antarctica and the Arctic, ARs are fewer in number but often have an outsized impact by either producing significant snow accumulation events, or, depending on their thermal characteristics, initiating melt events on ice sheets, ice shelves, and sea ice. In this study, we apply both reanalysis and climate model data to evaluate high latitude ARs for both the Arctic and Antarctic in the context of teleconnections and modes of variability. Specifically, we fold in both MERRA-2 and ERA5 reanalysis as well as historical and climate change simulations from the CESM2 (Community Earth System Model, Version 2) and E3SMv2 (Energy Exascale Earth System Model, v2) with multiple ensemble members to better understand natural variability versus climate change signals. An overview of AR climatology and impacts will be presented, including a baseline uncertainty quantification analysis using data from ARTMIP (the Atmospheric River Tracking Method Intercomparison Project). AR impacts during specific modes of variability will be characterized by diagnosing precipitation and boundary layer temperature associated with Ars influencing the cryosphere. Modes of variability investigated include the SAM (Southern Annular Mode), PDO (Pacific Decadal Oscillation), PSA2 (Pacific South American Mode 2), the IOD (Indian Ocean Dipole), and the AO (Arctic Oscillation).
Determining the distribution of redshifts for galaxies in wide-field photometric surveys is essential for robust cosmological studies of weak gravitational lensing. We present the methodology, calibrated redshift distributions, and uncertainties of the final Dark Energy Survey Year 6 (Y6) weak lensing galaxy data, divided into four redshift bins centered at $\langle z \rangle = [0.414, 0.538, 0.846, 1.157]$. We combine independent information from two methods on the full shape of redshift distributions: optical and near-infrared photometry within an improved Self-Organizing Map $p(z)$ (SOMPZ) framework, and cross-correlations with spectroscopic galaxy clustering measurements (WZ), which we demonstrate to be consistent both in terms of the redshift calibration itself and in terms of resulting cosmological constraints within 0.1$σ$. We describe the process used to produce an ensemble of redshift distributions that account for several known sources of uncertainty. Among these, imperfection in the calibration sample due to the lack of faint, representative spectra is the dominant factor. The final uncertainty on mean redshift in each bin is $σ_{\langle z\rangle} = [0.012, 0.008,0.009, 0.024]$. We ensure the robustness of the redshift distributions by leveraging new image simulations and a cross-check with galaxy shape information via the shear ratio (SR) method.
The calibration of CALPHAD (CALculation of PHAse Diagrams) models involves the solution of a very challenging high-dimensional multiobjective optimization problem. Traditional approaches to parameter fitting predominantly rely on gradient-free methods, which while robust, are computationally inefficient and often scale poorly with model complexity. In this work, we introduce and demonstrate a generalizable framework for analytic gradient-based optimization of the parameters of the CALPHAD model enabled by the recently formalized Jansson derivative technique. This method allows for efficient evaluation of gradients of thermodynamic properties at equilibrium with respect to model parameters, even in the presence of arbitrarily complex internal degrees of freedom. Leveraging these semi-analytic gradients, we employ the conjugate gradient (CG) method to optimize thermodynamic model parameters for four binary alloy systems: Cu-Mg, Fe-Ni, Cr-Ni, and Cr-Fe. Across all systems, CG achieves comparable or superior optimality relative to Bayesian ensemble Markov Chain Monte Carlo (MCMC) with improvements in computational efficiency ranging from one to three orders of magnitude. Furthermore, our results establish a new paradigm for CALPHAD assessments in which high fidelity data-rich model calibration becomes tractable using deterministic gradient-informed algorithms.
Sustainable aviation fuels have the potential to improve efficiency, reduce emissions, and enhance energy security. To help identify viable sustainable aviation fuels and accelerate research, machine learning models have been developed to predict relevant physicochemical properties. However, many models have limited applicability, leverage data from complex analytical techniques with confined spectral ranges, or use feature decomposition methods that offer limited interpretability. Using liquid-phase Fourier Transform Infrared (FTIR) spectra, this study presents a structured method for creating accurate and interpretable property prediction models for neat molecules, aviation fuels, and blends. Liquid FTIR spectra can be collected quickly and consistently, offering high reliability, sensitivity, and component specificity using less than 2 ml of sample. The method first decomposes FTIR spectra into fundamental building blocks using non-negative matrix factorization (NMF) to enable scientific analysis of FTIR spectra attributes and fuel properties. The NMF features are then used to create five ensemble models for predicting final boiling point, flash point, freezing point, density at 15°C, and kinematic viscosity at -20°C. All models were trained using experimental property data from neat molecules, aviation fuels, and blends. The models accurately predict key properties across a broad range of neat molecules and representative fuels and blends, while enabling interpretation of relationships between compositional elements, such as functional groups or chemical classes, and their resulting properties. This demonstrates strong potential to support sustainable aviation fuel research and development. The models and data are available on an interactive web tool.
Adding small amounts of a more reactive dopant metal to a more selective host metal is a well-known strategy for promoting the catalytic reactivity of the latter without sacrificing its selectivity. While substantial attention has been given to coinage metal hosts for activating individual C–H or O–H bonds, less attention has been given to more exotic metals, such as indium, which is highly selective in the complex hydrogenation of CO 2 to methanol. Herein, we describe the synthesis and properties of Pd–In alloys containing Pd in various states of aggregation (isolated atom, small clusters, and extended clusters) assessed through various characterization methods. These materials exhibit unique catalytic behaviors, with Pd promoting both the reaction rate and methanol selectivity in all cases, though its efficacy is highest when Pd is present in small clusters. Here, the inefficiency of high Pd loadings is due in part to losses in Pd accessibility, while the importance of aggregated vs isolated Pd is theorized to result from accelerated H 2 activation. Methods used to synthesize more conventional dilute-limit and single-atom alloy catalysts can, therefore, be extended to non-coinage metal hosts to promote and control more complex chemistries, though the roles of ensemble size may greatly differ.
A numerical study was performed to investigate boundary conditions for bleed openings that are needed in the numerical simulation of critical flow through turbojet inlets with bleed. Nine different boundary conditions (BCs) were devised and examined. Of the BCs examined, three were able to stabilize the terminal shock near the inlet's throat. This numerical study was based on the ensemble-averaged, unsteady, three-dimensional, compressible Navier-Stokes equations closed by the Baldwin-Lomax algebraic turbulence model. Solutions to the Navier-Stokes equations were obtained by using a hybrid implicit-explicit method (Beam and Warming/MacCormack). The multiblock grid system used in the solution procedure was generated by solving a set of elliptic partial differential equations. Solutions obtained were compared with available experimental data.
Coalescing supermassive black holes are expected to provide the strongest sources for gravitational radiation detected by LISA. Recent advances in numerical relativity provide a detailed description of the waveforms of such signals. We present a preliminary study of LISA's sensitivity to waveform parameters using a hybrid numerical/analytic waveform describing the coalescence of two equal-mass, nonspinning black holes. The Synthetic LISA software package is used to simulate the instrument response and the Fisher information matrix method is used to estimate errors in the waveform parameters. Initial results indicate that inclusion of the merger signal can significantly improve the precision of some parameter estimates. For example, the median parameter errors for an ensemble of systems with total redshifted mass of 10(exp 6) deg M solar mass at a redshift of z is approximately 1 were found to decrease by a factor of slightly more than two when the merger was included.
Astronauts are exposed to a unique set of stressors in spaceflight. Microgravity, isolation, confinement, and environmental and operational hazards: all of these can impact sleep, vigilant attention, and alertness, which are critical to mission success. In this paper, we seek to understand the most important predictors of alertness over the course of a space mission, using self-reported, cognitive, and environmental data collected from 24 astronauts on 6-month missions to the International Space Station (ISS). Alertness was repeatedly and objectively assessed on the ISS with a brief 3-minute Psychomotor Vigilance Test (PVT) that is highly sensitive to sleep deprivation. To relate PVT performance to time-varying and sparsely-measured environmental, operational, and psychological covariates, we propose a n ensemble prediction model comprising of linear mixed effects regression, random forest, and functional concurrent regression models. An extensive cross-validation procedure reveals that this ensemble outperforms any one of its components alone. We also discover that a participant’s past performance, reported fatigue and stress, and temperature and radiation exposure were among the most important variables associated with alertness. This method is broadly applicable to environmental studies where the main goal is accurate, individualized prediction involving a mixture of person-level traits and irregularly measured time series.
We present preliminary results for the contributions to the neutron EDM arising from the QCD θ-term, the Weinberg three-gluon and the quark chromo-EDM operators from our ongoing lattice calculations using clover valence quarks on the MILC HISQ lattices. We use the gradient-flow technique to smooth the lattices and renormalize the gluonic operators, and use the Schwinger source method to incorporate the quark chromo-EDM interactions in the quark propagator. For the QCD θ-term and the Weinberg three-gluon operator, we report results in the gradient-flow scheme from 8 ensembles at four lattice spacings and three pion masses, including 2 physical pion mass ensembles. For the quark chromo-EDM, unrenormalized results are presented at two lattice spacings, a=0.12 and 0.09 fm, and two pion masses, M π =310 MeV and 220 MeV.
The method of simultaneous iteration with shift is extended to extraction of m-eigenpairs of a general eigenvalue problem of large order n in a parallel processing environment. The algorithm combines the power method and the Jacobi technique, and reduces to performing four basic operations. Parallel implementation of the algorithm is discussed in detail. The analysis accounts for computation and communication costs, and utilizes a parallel processing architecture of the ensemble type. Expressions for the computational efficiency and speedup are defined as a function of the problem and hardware parameters. Selected representative problems exhibit efficiencies ranging from 60 to 98 percent.
Cloud observation and cloud modeling data can be presented in histograms for each characteristic to be measured. Combining information from single-cloud histograms yields a summary histogram. Summary histograms can be compared to each other to reach conclusions about the behavior of an ensemble of clouds in different places at different times or about the accuracy of a particular cloud model. As in any scientific comparison, it is necessary to decide whether any apparent differences are statistically significant. The usual methods of deciding statistical significance when comparing histograms do not apply in this case because they assume independent data. Thus, a new method is necessary. The proposed method uses the Euclidean distance metric and bootstrapping to calculate the significance level.