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At least 757 records · Page 42

Computing Proximity to Threat Along Uncertain Trajectory to Support Urban Air Mobility

Many airspace threats affect the selection of a flight route, such as terrain, physical obstacles, adverse weather, and special-use airspace, among others. Threat avoidance during Urban Air Mobility (UAM) and Low Altitude Mobility (LAM) flights is especially challenging due to their lower cruising altitudes. These operations may be exposed to buildings, towers, trees, terrain undulations, etc., along much of their flight route. Moreover, these low-altitude flights in urban environments are expected to encounter very busy airspace, increasing the workload associated with threat avoidance. The Proximity to Threat (PtT) function aims to support onboard or remote pilots by computing the risk from geospatial threats in the airspace along an aircraft’s flight path. The threats are both static entities and dynamic airspace restrictions that have been modeled and stored in geo-referenced mapping databases. The flight path may be specified by waypoints, airways, or similar discrete route elements or by a time series of closely spaced position and altitude points. Flight path uncertainty can also be taken into account by assuming both the position and altitude to be sampled from two normal distributions, each being specified by a mean and variance. PtT uses this additional information to verify that the flight path remains clear of threats along a wider path or if a position is reached earlier or later than anticipated, assuring the pilot or operator that there will be an available safety margin even if the aircraft deviates due to one or more occurrences of unexpected wind gusts, mechanical failures, airspeed changes, collision avoidance maneuvers, etc. The client can specify an uncertainty confidence level to bound the set of trajectories evaluated for threats so that the confidence level corresponds to the client’s risk tolerance under the expected conditions. PtT can be used as a pre-flight planning tool to determine a safe route through known threats and in-flight to avoid emerging or changing threats. In this report, we present the PtT function, discuss how the trajectory uncertainty is incorporated into the PtT function, and describe the use of this PtT function in a representative scenario.

urban air mobility↗

Grand unified file indexing

Systems and methods are disclosed for a unified file index for a file system. In one example, a Grand Unified File Index (GUFI) includes a tree replicating the directory hierarchy of one or more primary filesystems, and individual metadata stores for each directory. The GUFI tree permits fast traversal, efficient user space access controls, and simple tree directed operations such as renames, moves, or permission changes. In some examples, the individual metadata stores can be implemented as embedded databases on flash storage for speed. In some examples, use of summary tables at the directory or subtree level can eliminate wasteful executions, prune tree traversal, and further improve performance. In various examples, efficient operation can be achieved from laptop to supercomputer scale, across a wide mix of file distributions and filesystems.

97 MATHEMATICS AND COMPUTING↗

IsoMatchMS : Open-Source Software for Automated Annotation and Visualization of High Resolution MALDI-MS Spectra

Due to its speed, accuracy, and adaptability to various sample types, matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) has become a popular method to identify molecular isotope profiles from biological samples. Often MALDI-MS data do not include tandem MS fragmentation data, and thus the identification of compounds in samples requires external databases so that the accurate mass of detected signals can be matched to known molecular compounds. Most relevant MALDI-MS software tools developed to confirm compound identifications are focused on small molecules (e.g., metabolites, lipids) and cannot be easily adapted to protein data due to their more complex isotopic distributions. Here, we present an R package called IsoMatchMS for the automated annotation of MALDI-MS data for multiple datatypes: intact proteins, peptides, and glycans. This tool accepts already derived molecular formulas or, for proteomics applications, can derive molecular formulas from a list of input peptides or proteins including proteins with post-translational modifications. In conclusion, visualization of all matched isotopic profiles is provided in a highly accessible HTML format called a trelliscope display, which allows users to filter and sort by several parameters such as match scores and the number of peaks matched. IsoMatchMS simplifies the annotation and visualization of MALDI-MS data for downstream analyses.

47 OTHER INSTRUMENTATION↗

Adaptation strategies of giant viruses to low-temperature marine ecosystems

Abstract Microbes in marine ecosystems have evolved their gene content to thrive successfully in the cold. Although this process has been reasonably well studied in bacteria and selected eukaryotes, less is known about the impact of cold environments on the genomes of viruses that infect eukaryotes. Here, we analyzed cold adaptations in giant viruses (Nucleocytoviricota and Mirusviricota) from austral marine environments and compared them with their Arctic and temperate counterparts. We recovered giant virus metagenome-assembled genomes (98 Nucleocytoviricota and 12 Mirusviricota MAGs) from 61 newly sequenced metagenomes and metaviromes from sub-Antarctic Patagonian fjords and Antarctic seawater samples. When analyzing our data set alongside Antarctic and Arctic giant viruses MAGs already deposited in the Global Ocean Eukaryotic Viral database, we found that Antarctic and Arctic giant viruses predominantly inhabit sub-10°C environments, featuring a high proportion of unique phylotypes in each ecosystem. In contrast, giant viruses in Patagonian fjords were subject to broader temperature ranges and showed a lower degree of endemicity. However, despite differences in their distribution, giant viruses inhabiting low-temperature marine ecosystems evolved genomic cold-adaptation strategies that led to changes in genetic functions and amino acid frequencies that ultimately affect both gene content and protein structure. Such changes seem to be absent in their mesophilic counterparts. The uniqueness of these cold-adapted marine giant viruses may now be threatened by climate change, leading to a potential reduction in their biodiversity.

Environmental Sciences & Ecology↗

Sulfur in achondritic meteorites

The sulfur abundances of samples of nearly 50 achondrites were examined to enlarge the database on the sulfur contents of various categories of achondrites. The study covered eucrites, howardites, diogenites, shergottites, chassignites, nakhilites, aubrites and three unique specimens. The study was spurred by the possibility that the S abundances could help identify the meteorites as originating on Mars or Venus. The S abundances and distributions varied widely, but confirmed that the data were valid indicators of the brecciation and thermal metamorphic history of each meteorite.

Gibson, E. K.↗

Probalistic Assessment of Radiation Risk for Solar Particle Events

For long duration missions outside of the protection of the Earth's magnetic field, exposure to solar particle events (SPEs) is a major safety concern for crew members during extra-vehicular activities (EVAs) on the lunar surface or Earth-to-moon or Earth-to-Mars transit. The large majority (~90%) of SPEs have small or no health consequences because the doses are low and the particles do not penetrate to organ depths. However, there is an operational challenge to respond to events of unknown size and duration. We have developed a probabilistic approach to SPE risk assessment in support of mission design and operational planning. Using the historical database of proton measurements during the past 5 solar cycles, the functional form of hazard function of SPE occurrence per cycle was found for nonhomogeneous Poisson model. A typical hazard function was defined as a function of time within a non-specific future solar cycle of 4000 days duration. Distributions of particle fluences for a specified mission period were simulated ranging from its 5th to 95th percentile. Organ doses from large SPEs were assessed using NASA's Baryon transport model, BRYNTRN. The SPE risk was analyzed with the organ dose distribution for the given particle fluences during a mission period. In addition to the total particle fluences of SPEs, the detailed energy spectra of protons, especially at high energy levels, were recognized as extremely important for assessing the cancer risk associated with energetic particles for large events. The probability of exceeding the NASA 30-day limit of blood forming organ (BFO) dose inside a typical spacecraft was calculated for various SPE sizes. This probabilistic approach to SPE protection will be combined with a probabilistic approach to the radiobiological factors that contribute to the uncertainties in projecting cancer risks in future work.

Kim, Myung-Hee Y.↗

Satellite-Surface Perspectives of Air Quality and Aerosol-Cloud Effects on the Environment: An Overview of 7-SEAS BASELInE

The objectives of 7-SEASBASELInE (Seven SouthEast Asian Studies Biomass-burning Aerosols and Stratocumulus Environment: Lifecycles and Interactions Experiment) campaigns in spring 2013-2015 were to synergize measurements from uniquely distributed ground-based networks (e.g., AERONET (AErosol RObotic NETwork)), MPLNET ( NASA Micro-Pulse Lidar Network)) and sophisticated platforms (e.g.,SMARTLabs (Surface-based Mobile Atmospheric Research and Testbed Laboratories), regional contributing instruments), along with satellite observations retrievals and regional atmospheric transport chemical models to establish a critically needed database, and to advance our understanding of biomass-burning aerosols and trace gases in Southeast Asia (SEA). We present a satellite-surface perspective of 7-SEASBASELInE and highlight scientific findings concerning: (1) regional meteorology of moisture fields conducive to the production and maintenance of low-level stratiform clouds over land; (2) atmospheric composition in a biomass-burning environment, particularly tracers-markers to serve as important indicators for assessing the state and evolution of atmospheric constituents; (3) applications of remote sensing to air quality and impact on radiative energetics, examining the effect of diurnal variability of boundary-layer height on aerosol loading; (4) aerosol hygroscopicity and ground-based cloud radar measurements in aerosol-cloud processes by advanced cloud ensemble models; and (5) implications of air quality, in terms of toxicity of nanoparticles and trace gases, to human health. This volume is the third 7-SEAS special issue (after Atmospheric Research, vol. 122, 2013; and Atmospheric Environment, vol. 78, 2013) and includes 27 papers published, with emphasis on air quality and aerosol-cloud effects on the environment. BASELInE observations of stratiform clouds over SEA are unique, such clouds are embedded in a heavy aerosol-laden environment and feature characteristically greater stability over land than over ocean, with minimal radar surface clutter at a high vertical spatial resolution. To facilitate an improved understanding of regional aerosol-cloud effects, we envision that future BASELInE-like measurement modeling needs fall into two categories: (1) efficient yet critical in-situ profiling of the boundary layer for validating remote-sensing retrievals and for initializing regional transport chemical and cloud ensemble models; and (2) fully utilizing the high observing frequencies of geostationary satellites for resolving the diurnal cycle of the boundary layerheight as it affects the loading of biomass-burning aerosols, air quality and radiative energetics.

AERONET↗

Characterizing GEO Titan IIIC Transtage Fragmentations using Ground-Based and Telescopic Measurements

In a continued effort to better characterize the geosynchronous orbit (GEO) environment, NASA's Orbital Debris Program Office (ODPO) utilizes various ground-based optical assets to acquire photometric and spectral data of known debris associated with fragmentations in or near GEO. The Titan IIIC Transtage upper stage is known to have fragmented four times. Two of the four fragmentations were in GEO while the Transtage fragmented a third time in GEO transfer orbit. The forth fragmentation occurred in low Earth orbit. To better assess and characterize these fragmentations, the NASA ODPO acquired a Titan Transtage test and display article previously in the custody of the 309th Aerospace Maintenance and Regeneration Group (AMARG) in Tucson, Arizona. After initial inspections at AMARG demonstrated that it was of sufficient fidelity to be of interest, the test article was brought to NASA Johnson Space Center (JSC) to continue material analysis and historical documentation. The Transtage has undergone two separate spectral measurement campaigns to characterize the reflectance spectroscopy of historical aerospace materials. These data have been incorporated into the NASA Spectral Database, with the goal of using telescopic data comparisons for potential material identification. A Light Detection and Ranging (LIDAR) system scan also has been completed and a scale model has been created for use in the Optical Measurement Center (OMC) for photometric analysis of an intact Transtage, including bidirectional reflectance distribution function (BRDF) measurements. An historical overview of the Titan IIIC Transtage, the current analysis that has been done to date, and the future work to be completed in support of characterizing the GEO and near GEO orbital debris environment will be discussed in the subsequent presentation.

Cowardin, Heather↗

Combinatorial Evaluation of Physical Feature Engineering, Classical Machine Learning, and Deep Learning Models for Synchrophasor Data at Scale

A major objective of the project was to train and evaluate the effectiveness of multiple event and anomaly detection, identification and classification deep temporal learning models for processing of real-time phasor measurement unit (PMU) data streams. A vast dataset, consisting of two years of phasor measurements from all three U.S. Interconnections, was curated and released by the Department of Energy (DOE) through Pacific Northwest National Laboratory (PNNL). The dataset also included an event log that provided event times and types (e.g. generator trips, line trips, planned service events, transformer operations, etc.). Our analysis of this dataset addressed six (6) of the eleven (11) research priorities identified in Funding Opportunity Announcement (FOA) DE-FOA-0001861 “Big Data Analysis of Synchrophasor Data” (FOA 1861). Rather than being limited to pre-determined specific algorithms, this project relied on the uniquely structured, highly performant underlying time series database capabilities of the PredictiveGrid platform to assess the vast dataset utilizing a wide variety of algorithms.

24 POWER TRANSMISSION AND DISTRIBUTION↗

The EXOSAT database and archive

The EXOSAT database provides on-line access to the results and data products (spectra, images, and lightcurves) from the EXOSAT mission as well as access to data and logs from a number of other missions (such as EINSTEIN, COS-B, ROSAT, and IRAS). In addition, a number of familiar optical, infrared, and x ray catalogs, including the Hubble Space Telescope (HST) guide star catalog are available. The complete database is located at the EXOSAT observatory at ESTEC in the Netherlands and is accessible remotely via a captive account. The database management system was specifically developed to efficiently access the database and to allow the user to perform statistical studies on large samples of astronomical objects as well as to retrieve scientific and bibliographic information on single sources. The system was designed to be mission independent and includes timing, image processing, and spectral analysis packages as well as software to allow the easy transfer of analysis results and products to the user's own institute. The archive at ESTEC comprises a subset of the EXOSAT observations, stored on magnetic tape. Observations of particular interest were copied in compressed format to an optical jukebox, allowing users to retrieve and analyze selected raw data entirely from their terminals. Such analysis may be necessary if the user's needs are not accommodated by the products contained in the database (in terms of time resolution, spectral range, and the finesse of the background subtraction, for instance). Long-term archiving of the full final observation data is taking place at ESRIN in Italy as part of the ESIS program, again using optical media, and ESRIN have now assumed responsibility for distributing the data to the community. Tests showed that raw observational data (typically several tens of megabytes for a single target) can be transferred via the existing networks in reasonable time.

Reynolds, A. P.↗

Software for Sharing and Management of Information

DIAMS is a set of computer programs that implements a system of collaborative agents that serve multiple, geographically distributed users communicating via the Internet. DIAMS provides a user interface as a Java applet that runs on each user s computer and that works within the context of the user s Internet-browser software. DIAMS helps all its users to manage, gain access to, share, and exchange information in databases that they maintain on their computers. One of the DIAMS agents is a personal agent that helps its owner find information most relevant to current needs. It provides software tools and utilities for users to manage their information repositories with dynamic organization and virtual views. Capabilities for generating flexible hierarchical displays are integrated with capabilities for indexed- query searching to support effective access to information. Automatic indexing methods are employed to support users queries and communication between agents. The catalog of a repository is kept in object-oriented storage to facilitate sharing of information. Collaboration between users is aided by matchmaker agents and by automated exchange of information. The matchmaker agents are designed to establish connections between users who have similar interests and expertise.

Chen, James R.↗

Experimental Study of Slat Noise from 30P30N Three-Element High-Lift Airfoil in JAXA Hard-Wall Low-Speed Wind Tunnel

Aeroacoustic measurements associated with noise radiation from the leading edge slat of the canonical, unswept 30P30N three-element high-lift airfoil configuration have been obtained in a 2 m x 2 m hard-wall wind tunnel at the Japan Aerospace Exploration Agency (JAXA). Performed as part of a collaborative effort on airframe noise between JAXA and the National Aeronautics and Space Administration (NASA), the model geometry and majority of instrumentation details are identical to a NASA model with the exception of a larger span. For an angle of attack up to 10 degrees, the mean surface Cp distributions agree well with free-air computational fluid dynamics predictions corresponding to a corrected angle of attack. After employing suitable acoustic treatment for the brackets and end-wall effects, an approximately 2D noise source map is obtained from microphone array measurements, thus supporting the feasibility of generating a measurement database that can be used for comparison with free-air numerical simulations. Both surface pressure spectra obtained via KuliteTM transducers and the acoustic spectra derived from microphone array measurements display a mixture of a broad band component and narrow-band peaks (NBPs), both of which are most intense at the lower angles of attack and become progressively weaker as the angle of attack is increased. The NBPs exhibit a substantially higher spanwise coherence in comparison to the broadband portion of the spectrum and, hence, confirm the trends observed in previous numerical simulations. Somewhat surprisingly, measurements show that the presence of trip dots between the stagnation point and slat cusp enhances the NBP levels rather than mitigating them as found in a previous experiment.

Murayama, Mitsuhiro↗

Empirical Model of 10 – 130 MeV Solar Energetic Particle Spectra at 1 AU Based on Coronal Mass Ejection Speed and Direction

We present a new empirical model to predict solar energetic particle (SEP) event integrated and peak intensity spectra between 10 and 130 MeV at 1 AU, based on multi-point spacecraft measurements from the Solar TErrestrial RElations Observatory (STEREO), the Geostationary Operational Environmental Satellites (GOES), and the Payload for Antimatter Matter Exploration and Light-nuclei Astrophysics (PAMELA) satellite experiment. The analyzed data sample includes 32 SEP events occurring between 2010 and 2014, with a statistically significant proton signal at energies in excess of a few tens of MeV, unambiguously recorded at three spacecraft locations. The spatial distributions of SEP intensities are reconstructed by assuming an energy-dependent 2D Gaussian functional form, and accounting for the correlation between the intensity and the speed of the parent coronal mass ejection (CME), and the magnetic-field-line connection angle. The CME measurements used are from the Space Weather Database Of Notifications, Knowledge, Information (DONKI). The model performance, including its extrapolations to lower/higher energies, is tested by comparing with the spectra of 20 SEP events not used to derive the model parameters. Despite the simplicity of the model, the observed and predicted event-integrated and peak intensities at Earth and at the STEREO spacecraft for these events show remarkable agreement, both in the spectral shapes and their absolute values.

Alessandro Bruno↗

Structural and chemical complexity of minerals: An update

The complexities of chemical composition and crystal structure are fundamental characteristics of minerals that have high relevance to the understanding of their stability, occurrence and evolution. This review summarises recent developments in the field of mineral complexity and outlines possible directions for its future elaboration. The database of structural and chemical complexity parameters of minerals is updated by H-correction of structures with unknown H positions and the inclusion of new data. The revised average complexity values (arithmetic means) for all minerals are 3.54(2) bits/atom and 345(10) bits/cell (based upon 4443 structure reports). The distributions of atomic information amounts, chemIG and strIG, versus the number of mineral species fit the normal modes, whereas the distributions of total complexities, chemIG,total and strIG,total, along with numbers of atoms per formula and per unit cell are log normal. The three most complex mineral species known today are ewingite, morrisonite and ilmajokite, all either discovered or structurally characterised within the last five years. The most important complexity-generating mechanisms in minerals are: (1) the presence of isolated large clusters; (2) the presence of large clusters linked together to form three-dimensional frameworks; (3) formation of complex three-dimensional modular frameworks; (4) formation of complex modular layers; (5) high hydration state in salts with complex heteropolyhedral units; and (6) formation of ordered superstructures of relatively simple structure types. The relations between symmetry and complexity are considered. The analysis of temporal dynamics of mineralogical discoveries since 1875 with the step of 25 years show the increasing chemical and structural complexities of human knowledge of the mineral kingdom in the history of mineralogy. In the Earth’s history, both diversity and complexity of minerals experience dramatic increases associated with the formation of Earth’s continental crust, initiation of plate tectonics and the Great Oxidation event.

complexity↗

Using and Distributing Spaceflight Data: The Johnson Space Center Life Sciences Data Archive

Life sciences data collected before, during and after spaceflight are valuable and often irreplaceable. The Johnson Space Center Life is hard to find, and much of the data (e.g. Sciences Data Archive has been designed to provide researchers, engineers, managers and educators interactive access to information about and data from human spaceflight experiments. The archive system consists of a Data Acquisition System, Database Management System, CD-ROM Mastering System and Catalog Information System (CIS). The catalog information system is the heart of the archive. The CIS provides detailed experiment descriptions (both written and as QuickTime movies), hardware descriptions, hardware images, documents, and data. An initial evaluation of the archive at a scientific meeting showed that 88% of those who evaluated the catalog want to use the system when completed. The majority of the evaluators found the archive flexible, satisfying and easy to use. We conclude that the data archive effectively provides key life sciences data to interested users.

Cardenas, J. A.↗

Land-use in Amazonia and the Cerrado of Brazil: State of Knowledge and GIS Database

We have assembled datasets to strengthen the LargeScale Biosphere Atmosphere Experiment in Amazonia (LBA). These datasets can now be accessed through the Woods Hole Research Center homepage (www.whrc.org), and will soon be linked to the Pre-LBA homepages of the Brazilian Space Research Institute's Center for Weather and Climate Prediction (Instituto de Pesquisas Espaciais, Centro de Previsao de Tempo e Estudos Climaticos, INPE/CPTEC) and through the Oak Ridge National Laboratory, Distributed Active Archive Center (ORNL/DMC). Some of the datasets that we are making available involved new field research and/or the digitization of data available in Brazilian government agencies. For example, during the grant period we conducted interviews at 1,100 sawmills across Amazonia to determine their production of sawn timber, and their harvest intensities. These data provide the basis for the first quantitative assessment of the area of forest affected each year by selective logging (Nepstad et al, submitted to Nature). We digitized the locations of all of the rural households in the State of Para that have been mapped by the Brazilian malaria combat agency (SUCAM). We also mapped and digitized areas of deforestation in the state of Tocantins, which is comprised largely of savanna (cerrado), an ecosystem that has been routinely excluded from deforestation mapping exercises.

Nepstad, Daniel C.↗

Machine learning surrogates for ion energy–angle distributions in thermal and RF plasma sheaths

Ion energy–angle distributions (IEADs) at material surfaces are a critical input for plasma–material interaction (PMI) studies in fusion devices, yet they are computationally expensive to obtain using particle-in-cell (PIC) simulations. In this work, we develop a machine learning surrogate based on a deep deconvolutional neural network (DDeCNN) trained on large databases generated with the hPIC2 code. The surrogate is capable of reconstructing IEADs from sheath parameters for both thermal and radio-frequency (RF) plasmas, including cases with multiple ion species. Across thousands of test cases, the model achieves high accuracy, with over 97 % of predictions classified as good or average based on standard error metrics (MAE, MSE, L2). Even in the more challenging RF and multi-species regimes, the surrogate reliably captures the multi-peak structure of PIC results. Once trained, the surrogate produces IEADs in milliseconds on a common workstation, yielding speedups of six to seven orders of magnitude compared with running a full PIC simulation. This computational gain enables dense parameter scans and direct coupling of IEAD predictions with PMI and erosion models on whole-device scales in fusion-relevant conditions.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Uncertainty propagation in pore water chemical composition calculation using surrogate models

Performance assessment in deep geological nuclear waste repository systems necessitates an extended knowledge of the pore water chemical conditions prevailing in host-rock formations. In the last two decades, important progress has been made in the experimental characterization and thermodynamic modeling of pore water speciation, but the influence of experimental artifacts and uncertainties of thermodynamic input parameters are seldom evaluated. In this respect, we conducted an uncertainty propagation study in a reference geochemical model describing the pore water chemistry of the Callovian-Oxfordian clay formation. Nineteen model input parameters were perturbed, including those associated to experimental characterization (leached anions, exchanged cations, cation exchange selectivity coefficients) and those associated to generic thermodynamic databases (solubilities). A set of 13 quantities of interest were studied by the use of polynomial chaos expansions built non-intrusively with a least-squares forward stepwise regression approach. Training and validation sets of simulations were carried out using the geochemical speciation code PHREEQC. The statistical results explored the marginal distribution of each quantity of interest, their bivariate correlations as well as their global sensitivity indices. The influence of the assumed distributions for input parameters uncertainties was evaluated by considering two parametric domain sizes.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗