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At least 739 records · Page 41

Performance Analysis of Scientific and Engineering Applications Using MPInside and TAU

In this paper, we present performance analysis of two NASA applications using performance tools like Tuning and Analysis Utilities (TAU) and SGI MPInside. MITgcmUV and OVERFLOW are two production-quality applications used extensively by scientists and engineers at NASA. MITgcmUV is a global ocean simulation model, developed by the Estimating the Circulation and Climate of the Ocean (ECCO) Consortium, for solving the fluid equations of motion using the hydrostatic approximation. OVERFLOW is a general-purpose Navier-Stokes solver for computational fluid dynamics (CFD) problems. Using these tools, we analyze the MPI functions (MPI_Sendrecv, MPI_Bcast, MPI_Reduce, MPI_Allreduce, MPI_Barrier, etc.) with respect to message size of each rank, time consumed by each function, and how ranks communicate. MPI communication is further analyzed by studying the performance of MPI functions used in these two applications as a function of message size and number of cores. Finally, we present the compute time, communication time, and I/O time as a function of the number of cores.

Saini, Subhash↗

Interpretable Machine Learning Models for Autonomous Characterization of Analogue Ocean World Seawater Chemistry and Biosignature Potential Using Isotope Ratio Data

Background: Future missions to ocean worlds, such as Enceladus and Europa, will attempt to characterize the subsurface seawater chemistry and assess the potential for life. Such missions will be equipped with capabilities to precisely measure volatile isotopes in plumes, atmospheres, and exospheres. Motivation: While large isotopic fractionations can indicate a biological source, there are signatures resulting from abiotic geochemical processes that mimic isotopic biosignatures. While machine learning (ML) has the potential to disentangle competing effects and biotic mimicry, high-dimensional isotope ratio mass spectrometry (IRMS) data is likely to contain noise/irrelevant features and involve complex statistical interactions that make human inference and interpretation difficult. Further, ML predictions with as far-reaching implications as an extraterrestrial biosignature on an ocean world requires the use of interpretable models (i.e., not “black box” models) with physically and mathematically meaningful feature spaces along with false positive diagnostics. Methods: We use volatile CO2 IRMS data of analogue ocean world seawaters to validate an ML approach to provide biogeochemical context for biosignature detection. We employ a feature selection method called nearest-neighbor projected distance regression (NPDR) that detects statistical interactions and helps elucidate the mechanisms of the Random Forest classification models. Results: We train and validate predictive ML models on volatile CO2 IRMS data of analogue ocean world seawaters to predict major salt components (e.g., MgSO4, NaHCO3), pH, ionic strength, and the presence of biosignatures. Features derived from IRMS measurements are augmented with extracted time-series features. Our results show high test accuracy and interpretability, which is increased by interaction network visualization, sample-wise variable importance scores, and single-sample class probability estimates. We demonstrate an ML mission software solution that triggers autonomous data transmission and biogeochemical sample prediction.

geochemistry↗

Instantaneous Photosynthetically Available Radiation (IPAR) prediction models based on Neural Network for ocean waters.

Instantaneous photosynthetically available radiation (IPAR) at the ocean surface and its vertical profile below the surface play a critical role in models to calculate net primary productivity of marine phytoplankton. In this work, we report two IPAR prediction models based on neural network (NN) approach, one for open ocean and the other for coastal waters. These models are trained, validated, and tested using a large volume of synthetic datasets for open ocean and coastal waters simulated by a radiative transfer model. Our NN models are designed to predict IPAR under a large range of atmospheric and oceanic conditions. The NN models can compute subsurface IPAR profile very accurately up to euphotic zone depth. The root mean square errors associated with the diffuse attenuation coefficient of IPAR are less than 0.011 𝑚−1 and 0.036 𝑚−1 for open ocean and coastal waters respectively. The performance of the NN models is better than presently available semi analytical models, with significant superiority in coastal waters.

PACE↗

Barotropic Tidal Predictions and Validation in a Relocatable Modeling Environment

Under funding from the Office of Naval Research (ONR), the Mississippi State University Center for Air Sea Technology (CAST) has been working on developing a Relocatable Modeling Environment (RME) to provide a uniform and unbiased infrastructure for efficiently configuring numerical models in any geographic or oceanic region. Under Naval Oceanographic Office (NAVOCEANO) funding, the model was implemented and tested for NAVOCEANO use. With our current emphasis on ocean tidal modeling, CAST has adopted the Colorado University's numerical ocean model, known as CURReNTSS (Colorado University Rapidly Relocatable Nestable Storm Surge) Model, as the model of choice. During the RME development process, CURReNTSS has been relocated to several coastal oceanic regions, providing excellent results that demonstrate its veracity. This report documents the model validation results and provides a brief description of the Graphic user Interface.

Mehra, Avichal↗

On the Role of Meridional Winds in a Coupled Model of ENSO

The role of the interannual meridional wind anomalies in a simple coupled tropical Pacific ocean-atmosphere model is investigated. It is found that these anomallies play a key role in maintaining a finite ampltude interannual variability in the coupled simulations.Observed wind stress anomalies are also analyzed, and found similar in certain respects to those of the coupled model in the near-equatorial region.

ENSO wind anomalies Pacific ocean atmosphere↗

Two approaches to determining the sea-to-air flux of dimethyl sulfide - Satellite ocean color and a photochemical model with atmospheric measurements

The feasibility of using remotely sensed data to map the marine sources of a photoreactive trace gas was investigated by comparing satellite ocean color data with result of a photochemical model with atmospheric measurements of dimethyl sulfide (DMS). A mean DMS flux for a region in the tropical North Atlantic for October 1980 was derived, using an empirical relationship between DMS and chlorophyll a data obtained by the CZCS instrument, and was compared with the sea-to-air flux derived from a one-dimensional photochemical model that reproduces boundary layer concentrations of ozone, CO, NO, and hydrocarbons measured by an experimental vessel cruising at the same location and time. Results suggest that surface sensing of DMS sources is feasible but only in regions and seasons where phytoplankton pigment is a meaningful marker for biogenic emissions.

Thompson, Anne M.↗

Oceanic Observations

For many years, merchant ships and the naval fleets of various countries have been the major source of data over and in the open ocean. Oceanographic research experiments and process studies in the field have also contributed to the climatological data bases for the global ocean, but, for the most part, these have been limited in duration and extent. However, over the last 10 years under the auspices of the World Climate Research Program and the International Geosphere Biosphere Program the role of the oceans in global and climate change has taken on increased significance. This has created a need for a considerably improved understanding of the seasonal, interannual, decadal and longer time-scale variability of the physical and biogeochemical attributes of the global ocean. As a result, over the past 10 years several major international field programs have been implemented and have had a tremendous impact on the number of in situ observations obtained for the global ocean. The Tropical Ocean Global Atmosphere (TOGA) program, the World Ocean Circulation Experiment (WOCE), and the Joint Global Ocean Flux Study (JGOFS) were designed with observational, modelling, and process study components aimed at analyzing different aspects of the ocean's role in the coupled climate system. In parallel with the field programs, continuous space-based observations of sea surface temperature, sea surface topography, and sea surface winds spanning nearly a decade or longer have become a reality. During this same time period, numerical ocean models and computational power have advanced to the point where the oceanographic observations, both in situ and remotely sensed, can be assimilated into numerical ocean models in order to provide a four-dimensional (x-y-z-t) depiction of the evolving state of the global ocean.

Busalacchi, Antonio J.↗

A Reference Ocean Surface Emission and Backscatter Model from Microwaves to Infrared

Satellite observations are vital for the initialization of Numerical Weather Prediction models, and very important for climate monitoring and prediction, as well as other applications such as hydrology and flood awareness prediction. Knowledge of radiative contributions from the Earth's surface is needed to sound the lower troposphere from space. The lack of a reference quality ocean emission and backscatter model is a major gap in our ability to provide absolute calibration of the satellite based observing system. Uncertainty in emissivity models is not well characterized and different models are used for different spectral bands, for active and passive instruments. An International Space Science Institute (ISSI) team was put together [4] to address these issues. The objectives of the team are to provide a reference model as a community software (i.e., documented and freely available code), that is maintained and supported, has traceable uncertainty estimations, and that enables new science from microwaves to infrared with bidirectional reflectance distribution function (BRDF) capability. We will present the model and its various components, discussing the choices between various parameterizations, building on the LOCEAN model of [2]. The model predictions will be evaluated at various frequencies, including comparisons to radiometric observations by SMAP, AMSR2 and GMI (e.g., [5]). We will discuss early model evaluation in the infrared and for active microwave sensors. Areas of ongoing research include improving the foam parametrization (coverage and emissivity) to provide consistent performances across frequencies, building on [1], and the azimuthal dependence of the active and passive signals. The model will be used to generate training data for fast models e.g., Fastem, [3], that are used in operational data assimilation and climate re-analysis.

Emmanuel Dinnat↗

Drivers of Dry Day Sensitivity to Increased CO 2

Persistent precipitation deficits are among the most impactful consequences of global warming. Here we focus on changes in the annual number of dry days (NDD) and in the annual maximum length of dry spells due to a quadrupling of atmospheric CO 2 . We use atmosphere-only simulations to decompose the projected changes into additive contributions. A fast adjustment leads to a global increase in NDD despite notable regional exceptions (e.g., South Asia and Sahel). The effect of the uniform component of the surface ocean warming is model-dependent but shapes the regional distribution of the NDD response in each model. Finally, the ocean warming pattern also contributes to large uncertainties, likely through contrasting changes in large-scale circulation. Our results thus highlight the complexity of the NDD response, with policy-relevant practical implications for mitigation and adaptation strategies.

54 ENVIRONMENTAL SCIENCES↗

The Large-Scale Vorticity Balance of the Antarctic Continental Margin in a Fine-Resolution Global Simulation

The depth-integrated vorticity budget of a global, eddy-permitting ocean/sea ice simulation over the Antarctic continental margin (ACM) is diagnosed to understand the physical mechanisms implicated in meridional transport. The leading-order balance is between the torques due to lateral friction, nonlinear effects, and bottom vortex stretching, although details vary regionally. Maps of the time-averaged depth-integrated vorticity budget terms and time series of the spatially averaged, depth-integrated vorticity budget terms reveal that the flow in the Amundsen, Bellingshausen, and Weddell Seas and, to a lesser extent, in the western portion of East Antarctica, is closer to an approximate topographic Sverdrup balance (TSB) compared to other segments of the ACM. Correlation and coherence analyses further support these findings, and also show that inclusion of the vorticity tendency term in the response (the planetary vorticity advection and the bottom vortex stretching term) increases the correlation with the forcing (the vertical net stress curl), and also increases the coherence between forcing and response at high frequencies across the ACM, except for the West Antarctic Peninsula. Finally, these findings suggest that the surface stress curl, imparted by the wind and the sea ice, has the potential to contribute to the meridional, approximately cross-slope, transport to a greater extent in the Amundsen, Bellingshausen, Weddell, and part of the East Antarctic continental margin than elsewhere in the ACM.

58 GEOSCIENCES↗

Geocenter location and variations in earth orientation using global positioning system measurements

We have studied the use of GPS ground and flight tracking data to measure short-period earth orientation variations and changes in geocenter location. Comparisons between GPS-estimated earth rotation variations and those calculated from ocean tide models suggest that observed subdaily variations in earth rotation are dominated by oceanic tidal effects. Our preliminary GPS estimates for geocenter location agree with an independent satellite laser ranging estimates to 10-15 cm. Covariance analysis predicts that temporal resolution of GPS estimates for earth orientation and geocenter improves significantly when data collected from low earth-orbiting satellites as well as from ground sites are combined. The low-earth GPS tracking data enhance the accuracy and resolution for measuring high-frequency global geodynamical signals over time scales less than 1 day.

Malla, R. P.↗

Use of global positioning system measurements to determine geocentric coordinates and variations in Earth orientation

Geocentric tracking station coordinates and short-period Earth-orientation variations can be measured with Global Positioning System (GPS) measurements. Unless calibrated, geocentric coordinate errors and changes in Earth orientation can lead to significant deep-space tracking errors. Ground-based GPS estimates of daily and subdaily changes in Earth orientation presently show centimeter-level precision. Comparison between GPS-estimated Earth-rotation variations, which are the differences between Universal Time 1 and Universal Coordinated Time (UT1-UTC), and those calculated from ocean tide models suggests that observed subdaily variations in Earth rotation are dominated by oceanic tidal effects. Preliminary GPS estimates for the geocenter location (from a 3-week experiment) agree with independent satellite laser-ranging estimates to better than 10 cm. Covariance analysis predicts that temporal resolution of GPS estimates for Earth orientation and geocenter improves significantly when data collected from low Earth-orbiting satellites as well as from ground sites are combined. The low Earth GPS tracking data enhance the accuracy and resolution for measuring high-frequency global geodynamical signals over time scales of less than 1 day.

R P Malla↗

Comparison of plate and asthenospheric flow models for the thermal evolution of oceanic lithosphere

Although seafloor depth and heat flow for young oceanic lithosphere can be descibed by modeling the lithosphere as the boundary layer of a cooling halfspace, a long standing question has been why data at older ages deviate from those expected for a halfspace. Two classes of models have been proposed for these deviations. In one, heat added from below 'flattens' depth and heat flow. In the other, asthenospheric flow beneath the lithosphere perturbs the depths. We compare recent versions of the model classes: the GDH1 thin-lithosphere plate model (Stein and Stein, 1992) and an asthenospehric flow model (Phipps Morgan and Smith, 1992). The plate model fits heat flow data better than the flow model for all cases considered, and topographic data in all but one case. The flow model significantly overpredicts depths for the North Atlantic, because the assumed asthenospheric flow in the plate motion direction would yield deepening for old ages rather than the observed flattening. Overall, the GDH1 global average model does better than this flow model, whose parameters were fit to specific plates. Moreover, the plate models fit to specific plates do better than the flow model. Plate models thus appear more useful than this flow model, suggesting that deviations from a cooling halfspace are largely thermal in origin.

Stein, Carol A.↗

Simulations of Aerosol Microphysics in the NASA GEOS-5 Model

Aerosol-cloud-chemistry interactions have potentially large but uncertain impacts on Earth's climate. One path to addressing these uncertainties is to construct models that incorporate various components of the Earth system and to test these models against data. To that end, we have previously incorporated the Goddard Chemistry, Aerosol, Radiation, and Transport (GOCART) module online in the NASA Goddard Earth Observing System model (GEOS-5). GEOS-5 provides a platform for Earth system modeling, incorporating atmospheric and ocean general circulation models, a land surface model, a data assimilation system, and treatments of atmospheric chemistry and hydrologic cycle. Including GOCART online in this framework has provided a path for interactive aerosol-climate studies; however, GOCART only tracks the mass of aerosols as external mixtures and does not include the detailed treatments of aerosol size distribution and composition (internal mixtures) needed for aerosol-cloud-chemistry-climate studies. To address that need we have incorporated the Community Aerosol and Radiation Model for Atmospheres (CARMA) online in GEOS-5. CARMA is a sectional aerosol-cloud microphysical model, capable of treating both aerosol size and composition explicitly be resolving the aerosol distribution into a variable number of size and composition groupings. Here we present first simulations of dust, sea salt, and smoke aerosols in GEOS-5 as treated by CARMA. These simulations are compared to available aerosol satellite, ground, and aircraft data and as well compared to the simulated distributions in our current GOCART based system.

Colarco, Peter↗

Impacts of Interannual Climate Variability on Agricultural and Marine Ecosystems

The El Nino - Southern Oscillation (ENSO) is the dominant mode of global interannual climate variability, and seems to be the only mode for which current prediction methods are more skillful than climatology or persistence. The Zebiak and Cane intermediate coupled ocean-atmosphere model has been in use for ENSO prediction for more than a decade, with notable success. However, the sole dependence of its original initialization scheme and the improved initialization on wind fields derived from merchant ship observations proved to be a liability during 1997/1998 El Nino event: the deficiencies of wind observations prevented the oceanic component of the model from reaching the realistic state during the year prior to the event, and the forecast failed. Our work on the project was concentrated on the use of satellite data for improving various stages of ENSO prediction technology: model initialization, bias correction, and data assimilation. Close collaboration with other teams of the IDS project was maintained throughout.

Cane, M. A.↗

The Science Behind the NASA/NOAA Electronic Theater 2002

Details of the science stories and scientific results behind the Etheater Earth Science Visualizations from the major remote sensing institutions around the country will be explained. The NASA Electronic Theater presents Earth science observations and visualizations in a historical perspective. Fly in from outer space to Temple Square and the University of Utah Campus. Go back to the early weather satellite images from the 1960s see them contrasted with the latest US/Europe/Japan global weather data. See the latest images and image sequences from NASA & NOAA missions like Terra, GOES, NOAA, TRMM, SeaWiFS, Landsat 7 visualized with state-of-the art tools. A similar retrospective of numerical weather models from the 1960s will be compared with the latest "year 2002" high-resolution models. See the inner workings of a powerful hurricane as it is sliced and dissected using the University of Wisconsin Vis-5D interactive visualization system. The largest super computers are now capable of realistic modeling of the global oceans. See ocean vortexes and currents that bring up the nutrients to feed phitoplankton and zooplankton as well as draw the crill fish, whales and fisherman. See the how the ocean blooms in response to these currents and El Nino/La Nina climate regimes. The Internet and networks have appeared while computers and visualizations have vastly improved over the last 40 years. These advances make it possible to present the broad scope and detailed structure of the huge new observed and simulated datasets in a compelling and instructive manner. New visualization tools allow us to interactively roam & zoom through massive global images larger than 40,000 x 20,000 pixels. Powerful movie players allow us to interactively roam, zoom & loop through 4000 x 4000 pixel bigger than HDTV movies of up to 5000 frames. New 3D tools allow highly interactive manipulation of detailed perspective views of many changing model quantities. See the 1m resolution before and after shots of lower Manhattan and the Pentagon after the September 11 disaster as well as shots of Afghanistan from the Space Imaging IKONOS as well as debris plume images from Terra MODIS and SPOT Image. Shown by the SGI-Octane Graphics-Supercomputer are visualizations of hurricanes Michelle 2001, Floyd, Mitch, Fran and Linda. Our visualizations of these storms have been featured on the covers of the National Geographic, Time, Newsweek and Popular Science. Highlights will be shown from the NASA's large collection of High Definition TV (HDTV) visualizations clips New visualizations of a Los Alamos global ocean model, and high-resolution results of a NASA/JPL Atlantic ocean basin model showing currents, and salinity features will be shown. El Nino/La Nina effects on sea surface temperature and sea surface height of the Pacific Ocean will also be shown. The SST simulations will be compared with GOES Gulf Stream animations and ocean productivity observations. Tours will be given of the entire Earth's land surface at 500 m resolution from recently composited Terra MODIS data, Visualizations will be shown from the Earth Science Etheater 2001 recently presented over the last years in New Zealand, Johannesburg, Tokyo, Paris, Munich, Sydney, Melbourne, Honolulu, Washington, New York City, Pasadena, UCAR/Boulder, and Penn State University. The presentation will use a 2-CPU SGI/CRAY Octane Super Graphics workstation with 4 GB RAM and terabyte disk array at 2048 x 768 resolution plus multimedia laptop with three high resolution projectors. Visualizations will also be featured from museum exhibits and presentations including: the Smithsonian Air & Space Museum in Washington, IMAX theater at the Maryland Science Center in Baltimore, the James Lovell Discovery World Science museum in Milwaukee, the American Museum of Natural History (NYC) Hayden Planetarium IMAX theater, etc. The Etheater is sponsored by NASA, NOAA and the American Meteorological Society. This presentation is brought to you by the University of Utah College of Mines and Earth Sciences and, the Utah Museum of Natural History.

Hasler, A. Fritz↗

Southern Ocean Solar Reflection Biases in Cmip6 Models Linked to Cloud Phase and Vertical Structure Representations

Over the Southern Ocean (SO, 40˚S-70˚S), climate models have consistently underestimated solar reflection. Here we evaluate the relationship between cloud profiles, cloud phase and radiation over the SO in Coupled Model Intercomparison Project Phase 6 (CMIP6) models against Clouds and the Earth's Radiant Energy System (CERES) and Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations (CALIPSO). We find that the lack of solar reflection is slightly improved in CMIP6 models compared to CMIP5’s, attributable to a better representation of cloud fraction and phase. We show that clouds have a different vertical structure and radiative effect south and north of where the 0˚C isotherm meets the surface (~55˚S). Although the models capture the greater vertical extent of clouds south of 55˚S, they fail to reproduce the observed increase in solar reflection, which we pinpoint to cloud phase biases. Increasing CMIP6 supercooled liquid cloud opacity should help reduce their persistent SW biases.

Southern Ocean↗

Model-based estimation of wind fields over the ocean from wind scatterometer measurements. I - Development of the wind field model. II - Model parameter estimation

Techniques for the determination of near-surface mesoscale ocean wind fields on the basis of satellite scatterometer data are developed and demonstrated. The derivation of normal-boundary and parameterized-boundary-condition (PBC) wind-field models is outlined, and results from a simulation performed to estimate the model errors are presented in tables. It is shown that the PBC model provides accurate results while minimizing the number of unknowns. After a review of the principles of scatterometry and an analysis of scatterometer measurement noise, an objective function for the measurement parameters is developed and optimized on the basis of gradient search with initial values computed from pointwise wind estimates. The model is then applied to data from a simulation of the NASA Scatterometer (Li et al., 1984), and the results are presented in extensive graphs. The feasibility of model-based wind-field estimation and the appropriateness of the PBC model are demonstrated.

Long, David G.↗