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At least 739 records · Page 41

CMLM (Co-Optimized Machine-Learned Manifolds) [SWR-23-41]

Co-optimized Machine-Learned Manifolds (CMLM) is a data-driven approach for developing reduced-order manifold models for high-dimensional chemically reacting systems. It involves a specially designed neural network, the training of which simultaneously optimizes linear combinations of species that define the manifold, nonlinear mapping to outputs of interest such as reaction rates, and (optionally) subfilter closure for large eddy simulation. This software package provides an implementation of the CMLM approach in Python using the PyTorch machine learning library. A few example cases are included, showing how the tool can be applied to different types of data from 0D and 1D reacting simulations performed using Cantera. The neural networks can be saved in a format that is readable by the Pele suite of combustion solvers for use in reacting computational fluid dynamics simulations. This software repository contains several python scripts to perform various tasks associated with the Co-optimized Machine Learned Manifolds (CMLM) model, which is described in Perry, Henry de Frahan, and Yellapantula, CNF, 2022 (https://doi.org/10.1016/j.combustflame.2022.112286). This includes not only the code that defines the CMLM model, but also scripts to generate suitable training data, scripts to pre-process the data, scripts to train the CMLM model, and scripts to plot the output, as well as various other helper files. The scripts depend on several commonly used python libraries for data analysis and chemical reaction computations. The trained models that result from this tool are designed to work with the an interface being implemented in the Pele suite of reacting flow solvers (https://github.com/AMReX-Combustion).

Perry, Bruce↗

Consequences and benefits of utilizing continuous vibro-impact representations in constrained pipeline conveying fluid systems

Here, the effectiveness of continuous vibro-impact forcing representations for the cantilevered pipe that conveys fluid is explored and analyzed. The previously accepted forcing model utilizing a smoothened trilinear spring is estimated using three continuous forcing representations, namely, polynomial, rational polynomial, and hyperbolic tangent. The accuracy of the estimated forcing functions is investigated and analyzed by calculating the root mean square error, and bifurcation diagrams are generated and compared to the nominal system. Additionally, the dynamic response of the system is further characterized using Poincare maps, power spectra, and basins of attraction. Once all continuous forcing representations are analyzed and compared to the nominal system, the computational cost of each method is examined, and further limitations of the hyperbolic tangent method are discovered. It is proved that the hyperbolic tangent forcing representation most accurately captures the dynamic response of the pipeline, and the least accurate representation is the rational polynomial representation. Additionally, considerable computational cost is saved when employing the hyperbolic tangent representation compared to the discontinuous representation.

42 ENGINEERING↗

Outcomes and Insights From Simplified Analytic Trajectory Optimization for a Tethered Underwater Kite

This letter formulates and solves a periodic trajectory optimization problem for a tethered underwater kite. The goal is to maximize the average mechanical power harvested by the kite. The type of kite considered in this letter extracts electricity from ocean currents by moving cross-current as its reel away from its base station, and consumes electricity to reel back. The problem of optimizing this kite’s trajectory is challenging due to the high dimensionality and nonlinearity of its dynamics. To tackle this challenge, the literature often separates the problem into two subproblems focusing on optimizing the cross-current and the reel-in/reel-out components of the trajectory, respectively, which may be sub-optimal. In contrast, this letter solves for the combined cross-current and reel-in/reel-out trajectory by linearizing the dynamics of the kite around a zero-power reference equilibrium trajectory in spherical coordinates. This allows the trajectory optimization problem to be solved analytically for simple sinusoidal input perturbations from equilibrium. Here we use linear quadratic regulation to enable the nonlinear kite model to track the optimized trajectory. The result is a computationally efficient approach that achieves an attractive Loyd factor of 19.9%, while providing important insights into the nature of the optimal trajectory.

42 ENGINEERING↗

Multifidelity deep operator networks for data-driven and physics-informed problems

Operator learning for complex nonlinear systems is increasingly common in modeling multi-physics and multi-scale systems. However, training such high-dimensional operators requires a large amount of expensive, high-fidelity data, either from experiments or simulations. In this work, we present a composite Deep Operator Network (DeepONet) for learning using two datasets with different levels of fidelity to accurately learn complex operators when sufficient high-fidelity data is not available. Additionally, we demonstrate that the presence of low-fidelity data can improve the predictions of physics-informed learning with DeepONets. We demonstrate the new multi-fidelity training in diverse examples, including modeling of the ice-sheet dynamics of the Humboldt glacier, Greenland, using two different fidelity models and also using the same physical model at two different resolutions.

97 MATHEMATICS AND COMPUTING↗

Nonlinear Optics Measurements in IOTA

Nonlinear integrable optics is a recently proposed accelerator lattice design approach which allows to generate an amplitude dependent tune shift which is needed in high brightness accelerators to mitigate fast coherent instabilities. Whereas usually octupoles are used to achieve this task, this concept allows doing so without exciting any resonances, in turn preventing any particle loss. The concept is based around a special magnet design, together with specific constraints on the optics of the accelerator. To study such a system, the Integrable Optics Test Accelerator (IOTA) was recently constructed and commissioned at Fermilab. For the assessment of the performance of this concept, good knowledge of the optics and the (non-)linear dynamics without the special magnet is of key importance. As such, measurements were conducted in the IOTA ring, using the captured turn-by-turn data by the beam position monitors after excitation to infer quantities such as amplitude detuning and resonance driving terms. In this note, first results of these measurements are presented.

43 PARTICLE ACCELERATORS↗

A Siamese CNN + KNN-Based Classification Framework for Non-intrusive Load Monitoring

Through the development of smart grids, programs such as demand side response, have been presented as auxiliary services to the real-time operation of distributed networks. In order to provide consumers information on their energy consumption, so that a modulation in consumption is possible, non-intrusive load monitoring has been introduced as an solution to this pattern recognition problem. Non-intrusive load monitoring enables the modeling of electrical loads connected to the low-voltage system, considering only a single measurement point. Presented state-of-the-art solutions though, consider availability of data as well as representation of all possible classes of the environment. This is of course a most conservative hypothesis, since in real-life applications availability of such data is much difficult, as well as the dynamic behavior of models is implicitly evolving in time. Here, a framework that uses neural Siamese networks with k-nearest neighbor clustering is presented toward non-intrusive load monitoring. Online learning feature is implemented, which relaxes the hypothesis of data requirements as well addresses the evolving nature of load profile. k-nearest clustering allows nonlinear characteristic space modelling. Test results using synthetics and real-life data show that the solution, besides obtaining a good generalizability in the classification, also obtained results with an accuracy of 95.77%.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Near-octave lithium niobate soliton microcomb

Thin film lithium niobate (LN) is bringing renewed potential to the realm of integrated photonics. Its strong quadratic and cubic nonlinearities as well as wide transparency window are ideal for realizing on-chip self-referenced soliton microcombs. However, broadband Kerr cavity soliton generation in LN thin films remains challenging due to limited dispersion control and competition from strong stimulated Raman scattering (SRS). Here, we demonstrate the generation of soliton microcombs in LN thin films featuring broad spectral spans up to 4/5 octaves with the emission of dual dispersion waves (2/3 octaves apart) and sub-terahertz repetition rates (down to 335 GHz) by suppressing strong SRS. Numerical simulations based on coupled-mode equations that incorporate Raman effects further elucidate the soliton dynamics in this highly Raman-active material system.

Gong, Zheng (ORCID:0000000301704870)↗

A Model-Free Frequency Control Approach for Diesel-Wind Powered Microgrids

Islanded microgrids usually consist of diesel generators and renewable energy sources (RES) to reduce the operating cost. Such microgrids have shown values for powering remote locations, but introduced unique challenges for frequency control of the grid due to the variability of renewable energy as well as the decoupled design of converter interface in RES. So, supportive control in RES becomes mandatory in such networks. This paper proposes a new dynamic control strategy, based on model-free control (MFC) approach, to support the primary frequency control of such islanded microgrids. The practical values of MFC have been discussed in various domains due to its control capability without modeling procedure and its efficient computation. In particular, we consider the diesel-wind system and the proposed MFC strategy is utilized as an online controller, which computes supplementary control signals for the rotor-side converter of the available wind turbine generators (WTGs). The calculated input signals allow WTGs to respond to frequency variations and improve the frequency response of the system. The controller is implemented and verified using the modified IEEE 33-bus full nonlinear model of the three-phase diesel-wind system in Simulink. Simulation results show the enhanced frequency response from the MFC strategy.

Park, Byungkwon↗

Cations Control Lipid Bilayer Memcapacitance Associated with Long-Term Potentiation

Phospholipid bilayers can be described as capacitors whose capacitance per unit area (specific capacitance, C m ) is determined by their thickness and dielectric constant–independent of applied voltage. It is also widely assumed that the C m of membranes can be treated as a “biological constant”. Recently, using droplet interface bilayers (DIBs), it was shown that zwitterionic phosphatidylcholine (PC) lipid bilayers can act as voltage-dependent, nonlinear memory capacitors, or memcapacitors. When exposed to an electrical “training” stimulation protocol, capacitive energy storage in lipid membranes was enhanced in the form of long-term potentiation (LTP), which enables biological learning and long-term memory. LTP was the result of membrane restructuring and the progressive asymmetric distribution of ions across the lipid bilayer during training, which is analogous, for example, to exponential capacitive energy harvesting from self-powered nanogenerators. Here, we describe how LTP could be produced from a membrane that is continuously pumped into a nonequilibrium steady state, altering its dielectric properties. During this time, the membrane undergoes static and dynamic changes that are fed back to the system’s potential energy, ultimately resulting in a membrane whose modified molecular structure supports long-term memory storage and LTP. Here, we also show that LTP is very sensitive to different salts (KCl, NaCl, LiCl, and TmCl 3 ), with LiCl and TmCl 3 having the most profound effect in depressing LTP, relative to KCl. This effect is related to how the different cations interact with the bilayer zwitterionic PC lipid headgroups primarily through electric-field-induced changes to the statistically averaged orientations of water dipoles at the bilayer headgroup interface.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Microbial Models for Simulating Soil Carbon Dynamics: A Review

Abstract Soils store the largest amount of carbon (C) in the biosphere, and the C pool in soil is critical to the global C balance. Numerous microbial models have been developed over the last few decades to represent microbial processes that regulate the responses of soil organic carbon (SOC) to climate change. However, the representation of microbial processes varies, and how microbial processes are incorporated into SOC models has not been well explored. Here, we reviewed 71 microbial models to characterize the microbial processes incorporated into SOC models and analyzed variations in mechanistic complexity. We revealed that (a) four processes (microbial‐mediated decomposition, mineral interaction, microbial necromass recycling, and active and dormant microbial dynamics) are commonly incorporated in microbial models, (b) ∼48% of models simulate only one microbial process (i.e., microbial‐mediated decomposition) and 35% of models simulate two microbial processes: for example, microbial‐mediated decomposition and mineral interaction, (c) more than 80% microbial models use nonlinear equations, such as forward Michaelis‐Menten kinetics, to represent SOC decomposition, (d) the concept of persistence of SOC due to its intrinsic properties has been replaced by organo‐mineral interaction (∼39% of microbial models) that protects SOC from decomposition, and (e) various temperature and moisture modifiers and pH effects have been used to explain the environmental effect on microbial processes. In the future, to realistically incorporate microbial processes into Earth System Models, it is imperative to identify experimental evidence on rate limitation processes and firmly ground model structure on the field and laboratory data.

Environmental Sciences & Ecology↗

Model-free control for frequency response support in microgrids utilizing wind turbines

Islanded microgrids integrated with renewable energy resources bring additional challenges to the primary frequency control due to their power-electronic interfaced generations. Developing an efficient control strategy for inertia emulation and frequency response support of microgrids is becoming an important issue. Wind turbine dynamics, however, will degrade the emulated inertial and primary responses with most traditional control strategies. On the other hand, compensation methods often require the knowledge of system models at the design stage and state estimation for feedback once deployed online. To overcome these challenges, this paper explores a model-free control (MFC) strategy to emulate the desired inertia and support the frequency response of a diesel-wind microgrid system. Additionally, the proposed MFC strategy utilizes a model reference concept to obtain guaranteed inertial response and improve the frequency response of microgrids. This work considers different control strategies with different operating points. The proposed controller is implemented and verified using the modified 33-bus full nonlinear model of the three-phase diesel-wind system in Simulink. Simulation results demonstrate the improved frequency response by precisely emulating the desired inertia using the MFC strategy.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Linking Pressure to Electrochemical Evolution in Solid-State Conversion Cathode Composites

Conversion-type cathodes, such as sulfur, FeS 2 , and FeF 3 , offer high theoretical capacities in solid-state lithium batteries but are hindered by substantial volume changes during cycling, leading to interfacial contact loss, crack formation, and microstructural degradation. Here, we investigate the relationships between electrochemical, mechanical, and structural evolution in solid-state electrode composites with these three active materials. Using real-time stack-pressure monitoring, synchrotron X-ray absorption spectroscopy, and electrokinetic modeling, we elucidate how stress evolution is linked to reversible and irreversible redox reactions. Nonlinear stack pressure evolution in cells with sulfur, FeS 2 , and FeF 3 electrode composites is found to arise from material-specific volume changes, the balance of volume change between the working and counter electrode, and the formation of distinct reaction intermediates. The three materials exhibit distinct stack pressure evolution, which is closely related to the different reaction processes in the materials, as demonstrated with X-ray absorption spectroscopy measurements. Through mesoscale modeling, we relate the experimental measurements to species evolution at the particle scale and track the dynamic coexistence of intermediate phases. Our findings highlight the importance of designing for volume changes of a given active material in solid-state battery systems.

batteries↗

IC Project: w19_hossfault “Modelling of stick-slip behavior in sheared granular fault gouge & nonlinear elasticity behavior in cracked solid”

Low frequency earthquakes, non-volcanic tremor, and acoustic emissions are examples of weak seismic signals that may help detect major seismic events, i.e., earthquakes. In a laboratory setting, in which stick-slip events are simulated, acoustic emissions are detected far from the stick-slip events. In both, field and laboratory scale cases, the acoustic emission signals are sourced or detected in a volume remote from the volume that spawns the earthquake. Therefore, it is relevant to establish the causal relationship between signals detected on passive, remote monitors and the dynamics of the elastic structures that launch important seismic events. The work conducted under this IC allocation allowed us to utilize a numerical model that let us follow this causality, i.e., examine and connect the dynamics in a granular system (fault gouge), to signals detected on passive remote monitors. It was demonstrated that stress chains are key in the dynamics of granular systems and that their evolution is the source of the acoustic emission.

58 GEOSCIENCES↗

Measurement and memory in the periodically driven complex Ginzburg-Landau equation

In the present work we illustrate that classical but nonlinear systems may possess features reminiscent of quantum ones, such as memory, upon suitable external perturbation. As our prototypical example, we use the two-dimensional complex Ginzburg-Landau equation in its vortex glass regime. Here, we impose an external drive as a perturbation mimicking a quantum measurement protocol, with a given “measurement rate” (the rate of repetition of the drive) and “mixing rate” (characterized by the intensity of the drive). Using a variety of measures, we find that the system may or may not retain its coherence, statistically retrieving its original glass state, depending on the strength and periodicity of the perturbing field. The corresponding parametric regimes and the associated energy cascade mechanisms involving the dynamics of vortex waveforms and domain boundaries are discussed.

97 MATHEMATICS AND COMPUTING↗

Multigrid Reduction in Time for Chaotic Dynamical Systems

As CPU clock speeds have stagnated and high performance computers continue to have ever higher core counts, increased parallelism is needed to take advantage of these new architectures. Traditional serial time-marching schemes can be a significant bottleneck, as many types of simulations require large numbers of time-steps which must be computed sequentially. Parallel-in-time schemes, such as the Multigrid Reduction in Time (MGRIT) method, remedy this by parallelizing across time-steps and have shown promising results for parabolic problems. However, chaotic problems have proved more difficult, since chaotic initial value problems (IVPs) are inherently ill-conditioned. MGRIT relies on a hierarchy of successively coarser time-grids to iteratively correct the solution on the finest time-grid, but due to the nature of chaotic systems, small inaccuracies on the coarser levels can be greatly magnified and lead to poor coarse-grid corrections. Here we introduce a modified MGRIT algorithm based on an existing quadratically converging nonlinear extension to the multigrid Full Approximation Scheme (FAS), as well as a novel time-coarsening scheme. Together, these approaches better capture long-term chaotic behavior on coarse-grids and greatly improve convergence of MGRIT for chaotic IVPs. Further, we introduce a novel low-memory variant of the algorithm for solving chaotic PDEs with MGRIT which not only solves the IVP, but also provides estimates for the unstable Lyapunov vectors of the system. Finally, we provide supporting numerical results for the Lorenz system and demonstrate parallel speedup for the chaotic Kuramoto–Sivashinsky PDE over a significantly longer time-domain than in previous works.

97 MATHEMATICS AND COMPUTING↗

On a fully-implicit VMS-stabilized FE formulation for low Mach number compressible resistive MHD with application to MCF

This study presents the development and evaluation of a fully-implicit variational multiscale (VMS) stabilized unstructured finite element (FE) formulation for compressible magnetohydrodynamics (MHD) model, at low Mach number regime. The model describes the dynamics of a compressible conducting fluid in the low Mach number limit in the presence of electromagnetic fields and can be used to study aspects of astrophysical phenomena, important science and technology applications, and basic plasma physics phenomena. The specific applications that motivate this study are macroscopic simulations of the longer time-scale stability and disruptions of magnetic confinement fusion (MCF) devices, specifically the ITER tokamak. The discussion considers the development of the VMS FE representation, the structure of the stabilizing terms that deal with significant convective flows, the stabilization of the nearly incompressible response of the fluid flow, and the stabilization of the constraint that enforces the solenoidal involution on the magnetic field. The nonlinear discretized system is solved with scalable preconditioned Newton–Krylov iterative methods, which employs a multiphysics block preconditioning method based on approximate block factorizations and Schur complements. The study presents an evaluation of the VMS method on a 2D cartesian tearing mode instability, and illustrates the scalability of the solvers on MCF relevant problems. A set of results are also presented for longer time-scale stability and disruptions for the ITER tokamak. These include a vertical displacement event (VDE), and a (1,1) internal kink mode. Here, the formulation is demonstrated to be scalable and also reasonably robust with respect to the Lundquist number scaling.

42 ENGINEERING↗

Kernel learning backward SDE filter for data assimilation

In this paper, we develop a kernel learning backward SDE filter method to estimate the state of a stochastic dynamical system based on its partial noisy observations. A system of forward backward stochastic differential equations is used to propagate the state of the target dynamical model, and Bayesian inference is applied to incorporate the observational information. Further, to characterize the dynamical model in the entire state space, we introduce a kernel learning method to learn a continuous global approximation for the conditional probability density function of the target state by using discrete approximated density values as training data. Numerical experiments demonstrate that the kernel learning backward SDE is highly effective.

97 MATHEMATICS AND COMPUTING↗

How Does Escherichia coli Allocate Proteome?

Microorganisms are shown to actively partition their intracellular resources, such as pro- teins, for growth optimization. Recent experiments have begun to reveal molecular com- ponents unpinning the partition; however, it remains unclear quantitatively how individual parts orchestrate to yield precise resource allocation that is both robust and dynamic. Here we developed a coarse-grained mathematical framework that centers on guanosine pentaphosphate (ppGpp)-mediated regulation, and used it to systematically uncover the design principles of proteome allocation in Escherichia coli. Our results showed that cellular ability of resource partition lies in an ultrasensitive, negative feedback control- ling topology with the ultrasensitivity arising from zero-order amino acid kinetics and the negative feedback from ppGpp-controlled ribosome synthesis. In addition, together with the time-scale separation between slow ribosome kinetics and fast turnovers of ppGpp and amino acids, the network topology confers the organism an optimization mechanism which mimics sliding mode control, a nonlinear optimization strategy that is widely used in man-made systems. We further showed that such a controlling mechanism is robust against parameter variations and molecular fluctuations, and is also efficient for biomass production over time. Furthermore, this work elucidates the fundamental controlling mechanism of E. coli proteome allocation, thereby providing insights into quantitative microbial physiology as well as the design of synthetic gene networks.

59 BASIC BIOLOGICAL SCIENCES↗