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At least 739 records · Page 41
All sourcesNASA NTRSDOE OSTI
NASA NTRS2005

Statistical Considerations of Data Processing in Giovanni Online Tool

The GES DISC Interactive Online Visualization and Analysis Infrastructure (Giovanni) is a web-based interface for the rapid visualization and analysis of gridded data from a number of remote sensing instruments. The GES DISC currently employs several Giovanni instances to analyze various products, such as Ocean-Giovanni for ocean products from SeaWiFS and MODIS-Aqua; TOMS & OM1 Giovanni for atmospheric chemical trace gases from TOMS and OMI, and MOVAS for aerosols from MODIS, etc. (http://giovanni.gsfc.nasa.gov) Foremost among the Giovanni statistical functions is data averaging. Two aspects of this function are addressed here. The first deals with the accuracy of averaging gridded mapped products vs. averaging from the ungridded Level 2 data. Some mapped products contain mean values only; others contain additional statistics, such as number of pixels (NP) for each grid, standard deviation, etc. Since NP varies spatially and temporally, averaging with or without weighting by NP will be different. In this paper, we address differences of various weighting algorithms for some datasets utilized in Giovanni. The second aspect is related to different averaging methods affecting data quality and interpretation for data with non-normal distribution. The present study demonstrates results of different spatial averaging methods using gridded SeaWiFS Level 3 mapped monthly chlorophyll a data. Spatial averages were calculated using three different methods: arithmetic mean (AVG), geometric mean (GEO), and maximum likelihood estimator (MLE). Biogeochemical data, such as chlorophyll a, are usually considered to have a log-normal distribution. The study determined that differences between methods tend to increase with increasing size of a selected coastal area, with no significant differences in most open oceans. The GEO method consistently produces values lower than AVG and MLE. The AVG method produces values larger than MLE in some cases, but smaller in other cases. Further studies indicated that significant differences between AVG and MLE methods occurred in coastal areas where data have large spatial variations and a log-bimodal distribution instead of log-normal distribution.

Suhung, Shen↗
DOE OSTI2023

Adaptive Ensemble Refinement of Protein Structures in High Resolution Electron Microscopy Density Maps with Radical Augmented Molecular Dynamics Flexible Fitting

Recent advances in cryo-electron microscopy (cryo-EM) have enabled modeling macromolecular complexes that are essential components of the cellular machinery. The density maps derived from cryo-EM experiments are often integrated with manual, knowledge or artificial intelligence driven, and physics-guided computational methods to build, fit, and refine molecular structures. Going beyond a single stationary- structure determination scheme, it is becoming more common to interpret the experimental data with an ensemble of models, which contributes to an average observation. Hence, there is a need to decide on the quality of an ensemble of protein structures on-the-fly, while refining them against the density maps. Here, we introduce such an adaptive decision making scheme during the molecular dynamics flexible fitting (MDFF) of biomolecules. Using RADICAL-Cybertools, and the new RADICAL augmented MDFF implementation (R-MDFF) is examined in high-performance computing environments for refinement of two protein systems, Adenylate Kinase and Carbon Monoxide Dehydrogenase. For the test cases, use of multiple replicas in flexible fitting with adaptive decision making in R-MDFF improves the overall correlation to the density by 40% relative to the refinements of the brute-force MDFF. The improvements are particularly significant at high, 2 - 3 Å, map resolutions. More importantly, the ensemble model captures key features of biologically relevant molecular dynamics that is inaccessible to a single-model interpretation. Finally, the pipeline is applicable to systems of growing sizes, which is demonstrated using ensemble refinement of capsid proteins from Chimpanzee adenovirus. The overhead for decision making remaining low and robust to computing environments. The software is publicly available on GitHub and includes a short user guide to install the R-MDFF on different computing environments, from local Linux based workstations to High Performance Computing (HPC) environments.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2020

Local Strain and Polarization Mapping in Ferrielectric Materials

CuInP 2 S 6 (CIPS) is a van der Waals material that has attracted attention because of its unusual properties. Recently, a combination of density functional theory (DFT) calculations and piezoresponse force microscopy (PFM) showed that CIPS is a uniaxial quadruple-well ferrielectric featuring two polar phases and a total of four polarization states that can be controlled by external strain. In this study, we combine DFT and PFM to investigate the stress-dependent piezoelectric properties of CIPS, which have so far remained unexplored. The two different polarization phases are predicted to differ in their mechanical properties and the stress sensitivity of their piezoelectric constants. This knowledge is applied to the interpretation of ferroelectric domain images, which enables investigation of local strain and stress distributions. The interplay of theory and experiment produces polarization maps and layer spacings which we compare to macroscopic X-ray measurements. We found that the sample contains only the low-polarization phase and that domains of one polarization orientation are strained, whereas domains of the opposite polarization direction are fully relaxed. The described nanoscale imaging methodology is applicable to any material for which the relationship between electromechanical and mechanical characteristics is known, providing insight on structural, mechanical, and electromechanical properties down to ~10 nm length scales.

36 MATERIALS SCIENCE↗
NASA NTRS1973

Interdisciplinary applications and interpretations of ERTS data within the Susquehanna River Basin; resources inventory, land use and pollution

The author has identified the following significant results. Identification and mapping of three major kinds of coal refuse targets based on spectral signatures in channels four through seven of the ERTS-1 MSS were conducted. Correlation of the placement of the coal refuse targets with an existing map of their location was accomplished. Digital processing of ERTS-1 data permitted identification of stripped areas including ones that are not discernible by visual analysis of ERTS imagery. Combined visual and digital techniques of analyzing ERTS-1 data for geologic formations have been tried on selected areas of Pennsylvania. Mapping of two major agriculture counties to show land forms, drainage patterns, water, and urban areas were made using positive transparencies of MSS data. Two frames of the same central Pennsylvania area were brought into registration by translation and then merged even though the frames were obtained 71 days apart.

Mcmurtry, G. J.↗
NASA NTRS1973

Interpretation of land use and stream order, Pawnee River Basin, Kansas

The author has identified the following significant results. Land use and stream orders were mapped from ERTS-1 imagery covering the Pawnee River Basin. Total area of the basin, irrigated dry land crop area, and rangeland area were determined. The stream order of the basin was calculated by the Strahler method and provided more detail than is available on the comparable 1:250,000 sheets. This study has demonstrated the feasibility of using ERTS-1 imagery to map stream networks in greater detail than is required for 1:250,000 scale. The utility of ERTS-1 has also been demonstrated for mapping and mensuration of data relating to performance of ground cover types and the extent of irrigation.

Morain, S. A.↗
NASA NTRS1980

The reduction of remote sensing data by visual means

Issues likely to be of concern to educators called upon to teach courses involving the reduction (interpretation) of remotely sensed data by visual means are considered. Topics covered include: (1) information requirements of those using remotely-sensed data; (2) educational concepts involved in teaching students how to generate the desired information from a visual analysis of the data; (3) principles and techniques specific to the photointerpretation process; (4) concepts involved in the making of photographic measurements, as dictated by the geometry of remote sensing imagery; (5) the nature of the various kinds of mapping, plotting, and photointerpretation equipment; and (6) some special considerations with respect to the convergence of evidence and other principles involved in the interpretation of photographs. A recommended procedure for determining the usefulness of any given type of aerial or space photography in relation to the inventory of natural resources is included.

Colwell, R. N.↗
NASA NTRS1970

Multistage, multiseasonal and multiband imagery to identify and qualify non-forest vegetation resources

A description of space and supporting aircraft photography for the interpretation and analyses of non-forest (shrubby and herbaceous) native vegetation is presented. The research includes the development of a multiple sampling technique to assign quantitative area values of specific plant community types included within an assigned space photograph map unit. Also, investigations of aerial film type, scale, and season of photography for identification and quantity measures of shrubby and herbaceous vegetation were conducted. Some work was done to develop automated interpretation techniques with film image density measurement devices.

Driscoll, R. S.↗
NASA NTRS2008

Five-Year Wilkinson Microwave Anisotropy Probe (WMAP) Observations: Likelihoods and Parameters from the WMAP Data

The Wilkinson Microwave Anisotropy Probe (WMAP), launched in 2001, has mapped out the Cosmic Microwave Background with unprecedented accuracy over the whole sky. Its observations have led to the establishment of a simple concordance cosmological model for the contents and evolution of the universe, consistent with virtually all other astronomical measurements. The WMAP first-year and three-year data have allowed us to place strong constraints on the parameters describing the ACDM model. a flat universe filled with baryons, cold dark matter, neutrinos. and a cosmological constant. with initial fluctuations described by nearly scale-invariant power law fluctuations, as well as placing limits on extensions to this simple model (Spergel et al. 2003. 2007). With all-sky measurements of the polarization anisotropy (Kogut et al. 2003; Page et al. 2007), two orders of magnitude smaller than the intensity fluctuations. WMAP has not only given us an additional picture of the universe as it transitioned from ionized to neutral at redshift z approx.1100. but also an observation of the later reionization of the universe by the first stars. In this paper we present cosmological constraints from WMAP alone. for both the ACDM model and a set of possible extensions. We also consider tlle consistency of WMAP constraints with other recent astronomical observations. This is one of seven five-year WMAP papers. Hinshaw et al. (2008) describe the data processing and basic results. Hill et al. (2008) present new beam models arid window functions, Gold et al. (2008) describe the emission from Galactic foregrounds, and Wright et al. (2008) the emission from extra-Galactic point sources. The angular power spectra are described in Nolta et al. (2008), and Komatsu et al. (2008) present and interpret cosmological constraints based on combining WMAP with other data. WMAP observations are used to produce full-sky maps of the CMB in five frequency bands centered at 23, 33, 41, 61, and 94 GHz (Hinshaw et al. 2008). With five years of data, we are now able to place better limits on the ACDM model. as well as to move beyond it to test the composition of the universe. details of reionization. sub-dominant components, characteristics of inflation, and primordial fluctuations. We have more than doubled the amount of polarized data used for cosmological analysis. allowing a better measure of the large-scale E-mode signal (Nolta et al. 2008). To this end we describe an alternative way to remove Galactic foregrounds from low resolution polarization maps in which Galactic emission is marginalized over, providing a cross-check of our results. With longer integration we also better probe the second and third acoustic peaks in the temperature angular power spectrum, and have many more year-to-year difference maps available for cross-checking systematic effects (Hinshaw et al. 2008).

Dunkey, J.↗
NASA NTRS1979

Serenitatis multi-ringed basin - Regional geology and basin ring interpretation

New topographic data allow a reassessment of the ring structure and distribution of facies of the Serenitatis basin (SB) and correlation with the younger and essentially same-size Orientale basin. Three major rings of the main (southern) SB are mapped: the Linne ring, outlined by mare ridges, average diameter 420 km; the Haemus ring, outlined by basin-facing scarps and massifs with crenulated borders, 610 km; and the Vitruvius ring, outlined by basin-facing linear scarps and massifs, 880 km. The second ring is interpreted as the rim of the transient cavity, while Serenitatis ejecta should be present in significant amounts at the junction of the Serenitatis and Imbrium third rings. The new reconstruction indicates that portions of the SB are better preserved than previously thought, consistent with recent stratigraphic and sample studies that suggest an age (as young as 3.87 plus or minus 0.04 b.y.) for SB which is older than, but close to, the time of formation of the Imbrium basin.

Head, J. W., III↗
DOE OSTI2024

Radiation image reconstruction and uncertainty quantification using a Gaussian process prior

We propose a complete framework for Bayesian image reconstruction and uncertainty quantification based on a Gaussian process prior (GPP) to overcome limitations of maximum likelihood expectation maximization (ML-EM) image reconstruction algorithm. The prior distribution is constructed with a zero-mean Gaussian process (GP) with a choice of a covariance function, and a link function is used to map the Gaussian process to an image. Unlike many other maximum a posteriori approaches, our method offers highly interpretable hyperparamters that are selected automatically with the empirical Bayes method. Furthermore, the GP covariance function can be modified to incorporate a priori structural priors, enabling multi-modality imaging or contextual data fusion. Lastly, we illustrate that our approach lends itself to Bayesian uncertainty quantification techniques, such as the preconditioned Crank–Nicolson method and the Laplace approximation. The proposed framework is general and can be employed in most radiation image reconstruction problems, and we demonstrate it with simulated free-moving single detector radiation source imaging scenarios. We compare the reconstruction results from GPP and ML-EM, and show that the proposed method can significantly improve the image quality over ML-EM, all the while providing greater understanding of the source distribution via the uncertainty quantification capability. Furthermore, significant improvement of the image quality by incorporating a structural prior is illustrated.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2019

In-Field Whole-Plant Maize Architecture Characterized by Subcanopy Rovers and Latent Space Phenotyping

Core Ideas * Subcanopy rovers enabled 3D characterization of thousands of hybrid maize plots. * Machine learning produces heritable latent traits that describe plant architecture. * Rover-based phenotyping is far more efficient than manual phenotyping. * Latent phenotypes from rovers are ready for application to plant biology and breeding. Collecting useful, interpretable, and biologically relevant phenotypes in a resource-efficient manner is a bottleneck to plant breeding, genetic mapping, and genomic prediction. Autonomous and affordable subcanopy rovers are an efficient and scalable way to generate sensor-based datasets of in-field crop plants. Rovers equipped with lidar can produce three-dimensional reconstructions of entire hybrid maize (Zea mays L.) fields. In this study, we collected 2103 lidar scans of hybrid maize field plots and extracted phenotypic data from them by latent space phenotyping. We performed latent space phenotyping by two methods, principal component analysis and a convolutional autoencoder, to extract meaningful, quantitative latent space phenotypes (LSPs) describing whole-plant architecture and biomass distribution. The LSPs had heritabilities of up to 0.44, similar to some manually measured traits, indicating that they can be selected on or genetically mapped. Manually measured traits can be successfully predicted by using LSPs as explanatory variables in partial least squares regression, indicating that the LSPs contain biologically relevant information about plant architecture. These techniques can be used to assess crop architecture at a reduced cost and in an automated fashion for breeding, research, or extension purposes, as well as to create or inform crop growth models.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1973

Dynamics and morphology of Beaufort Sea ice determined from satellites, aircraft, and drifting stations

A series of measurements from drifting stations, aircraft, the ERTS-1, Nimbus 4, and Nimbus 5 satellites have jointly provided a new description of the dynamics and morphology of the ice cover of the Beaufort Sea. The combined analysis of these data show that the eastern Beaufort Sea ice cover is made up of large multiyear floes while the western part is made of small, predominantly first-year floes. The analysis suggests that this distribution might be quasi-steady and that the dynamics and thermodynamics of the region are more complex than hitherto known. The measurements consist of: (1) high resolution ERTS-1 imagery which is used to describe floe size and shape distribution, short term floe dynamics, and lead and polynya dynamics; (2) tracking by Nimbus 4 of IRLS drifting buoys to provide ice drift information which enhances the interpretation of the ERTS-1 imagery; (3) Nimbus 5 microwave (1.55 cm wavelength) imagery which provides synoptic, sequential maps on the distribution of multiyear and first-year ice types; (4) airborne microwave surveys and surface based observations made during 1971 and 1972 in conjunction with the AIDJEX (Arctic Ice Dynamics Joint Experiment) program.

Campbell, W. J.↗
NASA NTRS1981

LANDSAT C workshop field/laboratory exercises

Collection of ground information and supportive materials are absolutely necessary to verify and substantiate data extracted by the interpretation process regardless of sensor type and scale. Field observation and notes, the use of topographic and thematic maps, crop calendars, and climate records are just four examples of supportive materials which often are used in conjunction with remotely sensed materials. Illustration of this integrated multisensor approach is provided by four examples from the March, 1978 Santa Maria LANDSAT C Conference and Workshop. Four distinctive window sites were selected to demonstrate the usefulness of remotely sensed materials to solve geographic problems.

Frasca, J. W.↗
NASA NTRS1981

LANDSAT data for coastal zone management

The lack of adequate, current data on land and water surface conditions in New Jersey led to the search for better data collections and analysis techniques. Four-channel MSS data of Cape May County and access to the OSER computer interpretation system were provided by NASA. The spectral resolution of the data was tested and a surface cover map was produced by going through the steps of supervised classification. Topics covered include classification; change detection and improvement of spectral and spatial resolution; merging LANDSAT and map data; and potential applications for New Jersey.

Mckenzie, S.↗
NASA NTRS1984

Far IR Observations of the Magellanic Clouds

Several Large Magellanic and Small Magellanic Cloud H II regions were observed at 50 and 100 microns. Observations were made on three flights of the Kuiper Airborne Observatory using a six channel detector system. Fully sampled maps were made simultaneously at both wavelengths. The integrated properties of the H II regions are listed and interpretations of the results regarding stellar formation are presented.

Jones, T. J.↗
NASA NTRS1986

The Nimbus 7 LIMS map archival tape

The development of the Langley Map Archival Tape (LAMAT) is described. The role of the Nimbus 7 orbit characteristics in the analysis and interpretation of LAMAT data is discussed. The pressure ranges and heights for the LAMAT components are given and the synoptic fields for each pressure and latitude were modeled as Fourier series in longitude with time-dependent coefficients. Examples of LAMAT temperature fields are presented and the accuracies of the LAMAT fields are evaluated. The fit between the Langley inverted profile archival tape (LAIPAT) and LAMAT is examined by comparing averaged zonal mean fields and standard deviations. Consideration is given to diurnal variations of LAIPAT data, and the time and spatial smoothing of the data.

Haggard, K. V.↗
NASA NTRS1993

A summary of image segmentation techniques

Machine vision systems are often considered to be composed of two subsystems: low-level vision and high-level vision. Low level vision consists primarily of image processing operations performed on the input image to produce another image with more favorable characteristics. These operations may yield images with reduced noise or cause certain features of the image to be emphasized (such as edges). High-level vision includes object recognition and, at the highest level, scene interpretation. The bridge between these two subsystems is the segmentation system. Through segmentation, the enhanced input image is mapped into a description involving regions with common features which can be used by the higher level vision tasks. There is no theory on image segmentation. Instead, image segmentation techniques are basically ad hoc and differ mostly in the way they emphasize one or more of the desired properties of an ideal segmenter and in the way they balance and compromise one desired property against another. These techniques can be categorized in a number of different groups including local vs. global, parallel vs. sequential, contextual vs. noncontextual, interactive vs. automatic. In this paper, we categorize the schemes into three main groups: pixel-based, edge-based, and region-based. Pixel-based segmentation schemes classify pixels based solely on their gray levels. Edge-based schemes first detect local discontinuities (edges) and then use that information to separate the image into regions. Finally, region-based schemes start with a seed pixel (or group of pixels) and then grow or split the seed until the original image is composed of only homogeneous regions. Because there are a number of survey papers available, we will not discuss all segmentation schemes. Rather than a survey, we take the approach of a detailed overview. We focus only on the more common approaches in order to give the reader a flavor for the variety of techniques available yet present enough details to facilitate implementation and experimentation.

Spirkovska, Lilly↗
NASA NTRS2004

Distribution of Hydrogen Peroxide, Carbon Dioxide, and Sulfuric Acid in Europa's Icy Crust

Galileo's Near Infrared Mapping Spectrometer (NIMS) detected hydrogen peroxide, carbon dioxide and a hydrated material on Europa's surface, the latter interpreted as hydrated sulfuric acid (H2SO4*nH2O) or hydrated salts. Related compounds are molecular oxygen, sulfur dioxide, and two chromophores, one that is dark in the ultraviolet(UV) and concentrated on the trailing side, the other brighter in the UV and preferentially distributed in the leading hemisphere. The UV-dark material has been suggested to be sulfur.

Carlson, R. W.↗