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At least 739 records · Page 41
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NASA NTRS2019

Application of High-Dimensional Fuzzy K-Means Cluster Analysis to CALIOP/CALIPSO Version 4.1 Cloud-Aerosol Discrimination

This study applies fuzzy k-means (FKM) cluster analyses to a subset of the parameters reported in the CALIPSO lidar level 2 data products in order to classify the layers detected as either clouds or aerosols. The results obtained are used to assess the reliability of the cloud–aerosol discrimination (CAD) scores reported in the version 4.1 release of the CALIPSO data products. FKM is an unsupervised learning algorithm, whereas the CALIPSO operational CAD algorithm (COCA) takes a highly supervised approach. Despite these substantial computational and architectural differences, our statistical analyses show that the FKM classifications agree with the COCA classifications for more than 94 % of the cases in the troposphere. This high degree of similarity is achieved because the lidar-measured signatures of the majority of the clouds and the aerosols are naturally distinct, and hence objective methods can independently and effectively separate the two classes in most cases. Classification differences most often occur in complex scenes (e.g., evaporating water cloud filaments embedded in dense aerosol) or when observing diffuse features that occur only intermittently (e.g., volcanic ash in the tropical tropopause layer). The two methods examined in this study establish overall classification correctness boundaries due to their differing algorithm uncertainties. In addition to comparing the outputs from the two algorithms, analysis of sampling, data training, performance measurements, fuzzy linear discriminants, defuzzification, error propagation, and key parameters in feature type discrimination with the FKM method are further discussed in order to better understand the utility and limits of the application of clustering algorithms to space lidar measurements. In general, we find that both FKM and COCA classification uncertainties are only minimally affected by noise in the CALIPSO measurements, though both algorithms can be challenged by especially complex scenes containing mixtures of discrete layer types. Our analysis results show that attenuated backscatter and color ratio are the driving factors that separate water clouds from aerosols; backscatter intensity, depolarization, and mid-layer altitude are most useful in discriminating between aerosols and ice clouds; and the joint distribution of backscatter intensity and depolarization ratio is critically important for distinguishing ice clouds from water clouds.

Zeng, Shan↗
NASA NTRS2019

Predictive Modeling for Differential Diagnosis and Mortality Risk Assessment

The prevalence of electronic health record (EHR) systems has brought prodigious biomedical informatics opportunity. Automated machine learning methods can effectively utilize such data and have become common tools for healthcare predictive modeling. Researches in medical informatics have explored the potential of deep learning and classical models in emergent care scenarios. In particular, predicting differential diagnoses for admissions have proven useful in decreasing unnecessary lab tests and improving inpatient triage decision-making. Moreover, identification of high-risk patients for in-hospital mortality is vitally important to maximize allocation of medical resources.The Medical Information Mart for Intensive Care (MIMIC-III) database, containing de-identified critical care inpatient was used in our study. This data set captures hospital patient laboratory measurements, pharmacologic prescriptions, diagnostic data and procedure event recordings. When considering adult patients and discounting admissions with ICU length of stay less than 24 hours, there were 37,787 unique admissions and 30,414 total patients. We examined the top 25 most prevalent ICD-9 group-level disease specificities in MIMIC-III using a multi-label classification model. In-hospital mortality was modeled as binary classification with 4,155 (13%) adult patients that expired, of which 3,138 (75.5%) were in the ICU setting. The metrics AUC, F1 score, sensitivity and specificity values calculated for each disease label measured prediction performance.The usage of ICD-9 group codes reduced feature dimension from 14,567 to 942 and greatly improved distribution of patient diagnostic categories. Disease temporal patterns were captured by considering the most frequently sampled 6 vital signs and 13 laboratory values. Missing data were imputed at each time-stamp. Time-series raw hourly average values were converted into 5 summary features (mean, standard deviation, number of observations, min & max values). Patient demographic variables such as age, gender, marital status and ethnicity were also factored into the modeling. Choi et al showed that contextual embedding of medical data, diagnostic and procedural codes alone can predict future diagnoses with sensitivity as high as 0.79. We utilized an embedding technique called word2vec which allowed sparse representations of medical history to be transformed into dense word vectors. The mappings captured contextual information by treating each admission as a sentence and learning the most likely neighboring words in a sliding window fashion. Binary and multi-label classification was achieved via collapse models, which do not consider temporal information, as well as recurrent neural networks with regularization, Softmax output layer activation together with categorical cross-entropy as the loss function.

US Army collaboration↗
NASA NTRS2018

Automated Semantic Segmentation for Volumetric Cardiovascular Feature Quantification and Pathology Assessment

We present a pipeline method that curtails the expense and observer bias of manual cardiac evaluation by combining semantic segmentation and disease classification as a fully automatic processing pipeline. The initial element consists of a 2D U-Net convolutional neural network architecture for voxel-wise segmentation of the myocardium and ventricular cavities. The results of the segmentation were used to compute a comprehensive volumetric feature matrix that captured diagnostic clinical procedure data and that was used to model a cardiac pathology classifier.Our approach evaluated anonymized parasternal MRI cardiac images from a database of 100 patients (4 pathology groups, 1 healthy group, 20 patients per group) examined at the University Hospital of Dijon. We achieved top average Dice index scores of 0.939, 0.849, 0.886 for structure segmentation of the left ventricle (LV), right ventricle (RV) and myocardium respectively. A 5-ary pathology classification accuracy of 90% was recorded on an independent test set using our trained model.

Lindsey, Tony↗
NASA NTRS2018

FAIRness and Usability for Open-access Omics Data Systems

Omics data sharing is crucial to the biological research community, and the last decade or two has seen a huge rise in collaborative analysis systems, databases, and knowledge bases for omics and other systems biology data. We assessed the “FAIRness” of NASA’s GeneLab Data Systems (GLDS) along with four similar kinds of systems in the research omics data domain, using 14 FAIRness metrics. The range of overall FAIRness scores was 6-12 (out of 14), average 10.1, and standard deviation 2.4. The range of Pass ratings for the metrics was 29-79%, Partial Pass 0-21%, and Fail 7-50%. The systems we evaluated performed the best in the areas of data findability and accessibility, and worst in the area of data interoperability. Reusability of metadata, in particular, was frequently not well supported. We relate our experiences implementing semantic integration of omics data from some of the assessed systems for federated querying and retrieval functions, given their shortcomings in data interoperability. Finally, we propose two new principles that Big Data system developers, in particular, should consider for maximizing data accessibility.

Berrios, Daniel C.↗
NASA NTRS2020

Orbital Debris Quarterly News

Inside - Fifty-first SOZ Unit Breaks Up - Russian Mystery Satellite Fragments - Debris Assessment Software Version 3.0 Release - ORDEM 3.1 Release - The 2019 U.S. Government Orbital Debris Mitigation Standard Practices - Meeting Reports - Conference Abstracts from the NASA HVIT Team - Conference Abstracts from the NASA ODPO - Space Missions/Satellite Box Score

Phillip Anz-Meador↗
NASA NTRSDate not supplied

TPSAS-NF1676L-34683-DND

The lidar on the Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations (CALIPSO) mission, makes robust measurements of dust and has generated a length of record that is significant both seasonally and inter-annually. We exploit this record to determine a multi-year climatology of the properties of Middle Eastern dust in the vicinity of Kuwait City. In particular seasonal optical depths of dust gridded in accordance with the Level 3 data products protocol between 2006 and 2015. The data are screened using standard CALIPSO quality assurance flags, cloud aerosol discrimination (CAD) scores, overlying features and layer properties. CALIPSO is collaboration between NASA and Centre National d’Études Spatiales (CNES), was launched in April 2006 to provide vertically resolved measurements of cloud and aerosol distributions. The primary instrument on the CALIPSO satellite is the Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP), a near-nadir viewing two-wavelength polarization-sensitive instrument. In addition to CALIPSO, we use the AErosol RObotic NETwork (AERONET) sites in the region to identify extreme dust events such as Sand and Dust Storms (SDS). The lidar measurements of the vertical location of the layers along with predominant prevailing wind vectors will enable identification of dust sources and inform mitigation solutions for extreme SDS.

Ali H Omar↗
NASA NTRS2014

TPSAS-NF1676L-18357-DND

High-spectral resolution measurements (in the IR region) from space born infrared sensors can provide sufficient spectral information about cloud properties like cloud top pressure, cloud particle size and cloud optical thickness. Empirical orthogonal function (EOF) based regression scheme was used to retrieve cloud properties along with atmospheric state profiles. A channel based physical inversion scheme was also tried on cloud-contaminated radiances to improve retrieval accuracy achieved by regression scheme. Recently developed principle component (PC) based physical retrieval algorithm utilized the EOF transformation to compress both hyperspectral radiance spectra and atmospherical profiles into PC scores to greatly boost the computational speed while maintaining the information content. The accuracy of the (PC) based radiation transfer model (PCRTM) to simulate top-of the atmosphere(TOA) high-spectral resolution radiance spectra for both clear and cloudy sky conditions has been well tested by comparing with the other line-by-line radiation transfer model and using the observation data. The application of the PCRTM based physical inversion method on simulated IASI radiance under 'cloudy' conditions will be a good integrity test for the new algorithm.

X Liu↗
NASA NTRSDate not supplied

History of NASA’s Odor Assessment (Test 6)

NASA's Odor Assessment (Test 6) for nonmetallic materials and assembled articles for spacecraft has evolved since the Apollo program in 1966 to meet various habitable spacecraft nonmetallic programmatic requirements. The purpose of Test 6 is to determine if the odor from a material or assembled article is objectionable or revolting on an odor-characteristic scale of 0 to 4. Samples of the toxicity-screened test atmosphere from a conditioned specimen container are administered to an Odor Panel of qualified human research subject volunteers using a syringe and mask, and are assigned a scored odor characteristic of undetectable (0), barely detectable (1), easily detectable (2), objectionable (3), or revolting (4). The odor from a material or assembled article is objectionable or revolting if an average rating of 2.5 or higher is assigned by an Odor Panel. This manuscript presents the history of Test 6, beginning with the Apollo spacecraft nonmetallic materials selection guidelines and test requirements from 1966, in which tests were performed in oxygen atmospheres, and follows the odor test through Skylab, Space Shuttle, International Space Station, and Orion nonmetals testing, and acceptance requirements.

Benjamin Greene↗
NASA NTRS2020

Philadelphia Health & Air Quality: Assessing Land Surface Temperature, Vegetation Cover, and Compounding Vulnerability Factors to Identify High Priority Areas for Cooling Initiatives in Philadelphia, Pennsylvania

Heat is the leading cause of weather-related deaths in the US, with heat-related hospitalizations increasing by 2-5% between 2001-2010. In Philadelphia alone, 137 heat-related deaths were recorded between 2010-2018, while a total of 18 daily temperature records have been set since 2010. Temperature is relatively higher in cities compared to rural areas, a phenomenon known as the urban heat island effect. This effect exaggerates daytime maximum temperatures and nighttime heat retention in urban areas, which increases heat exposure in urban environments and especially impacts vulnerable populations. Vulnerability to heat-related illnesses is determined by a combination of risk factors, such as demographics, socioeconomic status, and preexisting health conditions. This project supported the Philadelphia Department of Public Health and Office of Sustainability by identifying priority areas for cooling interventions, such as heat danger educational outreach and urban tree planting. The team developed heat vulnerability scores for each census tract within Philadelphia. Remotely sensed land surface temperature, normalized difference vegetation index, normalized difference built-up index, normalized difference water index, and albedo data were calculated from Aqua Moderate Resolution Imaging Spectroradiometer and Landsat 8 Operational Land Imager/Thermal Infrared Sensor instruments. These variables were weighted against socioeconomic variables and preexisting health conditions using a principal component analysis. A total of 74 census tracts clustered were identified as high-risk areas for heat-related illnesses. 15 of these census tracts also had very low tree density (lower 20th percentile) and should be targeted for tree planting initiatives. The findings of this project will help target interventions to mitigate heat-related health issues and improve the overall wellness of Philadelphia residents.

Health & Air Quality↗
NASA NTRSDate not supplied

A Modified Delphi Method to Accelerate Consensus Building in Expert Judgment Elicitation

The 2017 Earth Science Decadal Survey recommends the implementation of a novel Earth Observing mission to study Aerosols, Clouds, Convection, and Precipitation. The assessment of the candidate architectures under consideration requires the use of Expert Judgment Elicitation. Some of the assessment scores are obtained through consensus among the Science Leadership Team. A modified Delphi method was developed to accelerate the consensus building process and reduce the number of cycles required to converge. This paper discusses which elements of the traditional method were modified, how the method was applied, and the impact of the modifications on generating consensus.

Expert Judgement↗
NASA NTRS2020

Orbital Debris: Quarterly News, April 2020

Inside - New NASA Orbital Debris Engineering Model ORDEM 3.1 - Composite Material Char Rate and Strength Retention Study at University of Texas Austin - Conference and Meeting Reports - Space Missions and Satellite Box Score

Orbital Debris Engineering Model↗
NASA NTRS2020

Philadelphia Health & Air Quality: Assessing Land Surface Temperature, Vegetation Cover, and Compounding Vulnerability Factors to Identify High Priority Areas for Cooling Initiatives in Philadelphia, Pennsylvania

Heat is the leading cause of weather-related deaths in the US, with heat-related hospitalizations increasing by 2-5% between 2001-2010. In Philadelphia alone, 137 heat-related deaths were recorded between 2010-2018, while a total of 18 daily temperature records have been set since 2010. Temperature is relatively higher in cities compared to rural areas, a phenomenon known as the urban heat island effect.This effect exaggerates daytime maximum temperatures and nighttime heat retention in urban areas, which increases heat exposure inurban environments and especially impacts vulnerable populations. Vulnerability to heat-related illnesses is determined by a combination of risk factors, such as demographics, socioeconomic status, and preexisting health conditions. This project supported the Philadelphia Department of Public Health and Office of Sustainability by identifying priority areas for cooling interventions, such as heat danger educational outreach and urban tree planting. The team developed heat vulnerability scores for each census tract within Philadelphia. Remotely sensed land surface temperature, normalized difference vegetation index, normalized difference built-up index, normalized difference water index, and albedo data were calculated from Aqua Moderate Resolution Imaging Spectroradiometer and Landsat 8 Operational Land Imager/Thermal Infrared Sensor instruments. These variables were weighted against socioeconomic variables and preexisting health conditions using a principal component analysis. A total of 74 census tracts clustered were identified as high-risk areas for heat-related illnesses. 15 of these census tracts also had very low tree density (lower 20th percentile) and should be targeted for tree planting initiatives. The findings of this project will help target interventions to mitigate heat-related health issues and improve the overall wellness of Philadelphia residents.

Health & Air Quality↗
NASA NTRS2020

Appraisal of SMAP Operational Soil Moisture Product from a Global Perspective

Space-borne soil moisture (SM) satellite products such as those available from Soil Moisture Active Passive (SMAP) offer unique opportunities for global and frequent monitoring of SM and also to understand its spatiotemporal variability. The present study investigates the performance of the SMAP L4 SM product at selected experimental sites across four continents, namely North America, Europe, Asia and Australia. This product provides global scale SM estimates at 9 km × 9 km spatial resolution at daily intervals. For the product evaluation, co-orbital in situ SM measurements were used, acquired at 14 test sites in North America, Europe, and Australia belonging to the International Soil Moisture Network (ISMN) and local networks in India. The satellite SM estimates of up to 0–5 cm soil layer were compared against collocated ground measurements using a series of statistical scores. Overall, the best performance of the SMAP product was found in North America (RMSE = 0.05 m(exp 3)/m(exp 3)) followed by Australia (RMSE = 0.08 m(exp 3)/m(exp 3)), Asia (RMSE = 0.09 m(exp 3)/m(exp 3)) and Europe (RMSE = 0.14 m(exp 3)/m(exp 3)). Our findings provide important insights into the spatiotemporal variability of the specific operational SM product in different ecosystems and environments. This study also furnishes an independent verification of this global product, which is of international interest given its suitability for a wide range of practical and research applications.

Soil moisture↗
NASA NTRS2020

Deep Space Human-Systems Research Recommendations for Future Human-Automation/Robotic Integration

Appropriate integration between automation and robotics systems and their human operators is essential for future space exploration. The Human Factors and Behavioral Performance Element of NASA’s Human Research Program requires a systematic understanding of the critical human-automation/robotic (HAR) integration, or HARI, design challenges for future space exploration. This document reports the results of a systematic assessment of the spaceflight-relevant HARI technologies and research topics addressing critical gaps in spaceflight-relevant HARI knowledge, and prioritizes research required for successful human performance and HAR integration. We reviewed relevant literature across the past ten years and interviewed ten subject matter experts to investigate the current state of HARI technology, challenges facing development, the state of HARI research across a wide range of fields, and opportunities for advancing the state of the art through directed research. This information was used to identify relevant HARI technologies and research topics, as well as factors to assess relative priority of HARI technologies. We worked with NASA stakeholders to weight the factors relevant to assessing HARI specific technologies. A multi-dimensional trade analysis was performed to objectively score HARI research topics and specific technologies to recommended investment priorities for NASA.

human-automation interaction↗
NASA NTRS2020

Orbital Debris Quarterly News, April 2020

Inside - Second Fragmentation of Fregat Upper Stage Debris - DAS v3.1 Release - Development of Experimental Hypervelocity Impact Capabilities with Non-Spherical Projectiles - Short-Term Satellite Breakup Risk Assessment Model Process - Two Recent Breakup Events Updated - Space Missions and Satellite Box Score

Orbital Debris↗
NASA NTRSDate not supplied

Algorithmic Detection of Elemental Biosignatures

Machine learning models that classify a sample as indicative or non-indicative of life could play an important role in life-detection missions. Their predictions result from agnostic algorithms and thereby add redundancy to judgements resulting from human expertise. Additionally, their important features can reveal the most informative measurements within the operational constraints of a life-detection mission. The Ladder of Life Detection (Neveu 2018) identifies the need for an understanding of how combinations of multiple biosignatures affect overall confidence. The present work provides a starting point to answer this need, and future work will expand the data types to obtain even more predictive combinations of features. Elemental abundance was chosen as a starting set of features due to its availability in diverse sample types, which are needed to train a generalizable model. A standardized dataset was collected, including 35 non-indicative, e.g., lunar rock, basalt; 19 indicative mixed, e.g., seawater, agricultural soil; 46 indicative non-alive, e.g., coal, chalk; and 10 indicative alive, e.g., biofilm, bacteria. This dataset could be valuable for complementary biosignature research. The samples were standardized to the same limit of detection of a simulated mission scenario. Four classification models were used: k-nearest neighbors (KNN), logistic regression (LR), linear support vector machines (SVM), and Gaussian naïve Bayes (GNB). To obtain feature importances, KNN was run on three principal components of the training data and LR and SVM were run with L1 and L2 regularization. The performances and feature importances of the six model variants on 40:60 train to validation ratios were assessed with Monte Carlo simulations. ROC AUC and mean accuracy scores ranged between 82% - 94%, with sensitivity greater than specificity. For indicative of life predictors, all models had C and Ca as strong and Cl as medium; a majority of models had N, K, and P as medium. For non-indicative of life predictors, all models had Si as strong, and a majority of models had Mg, Al, and Ti as medium. Varied elements were Fe (slightly non-indicative), H (slightly indicative), O (widely varied), Na, Mn, and S. These results serve as a proof of concept and suggest important elemental signals beyond merely the CHNOPS of Earth-based life.

Algorithmic↗
NASA NTRS2020

Radiometric approach for the detection of picophytoplankton assemblages across oceanic fronts

Cell abundances of Prochlorococcus, Synechococcus, and autotrophic picoeukaryotes were estimated in surface waters using principal component analysis (PCA) of hyperspectral and multispectral remote-sensing reflectance data. This involved the development of models that employed multilinear correlations between cell abundances across the Atlantic Ocean and a combination of PCA scores and sea surface temperatures. The models retrieve high Prochlorococcus abundances in the Equatorial Convergence Zone and show their numerical dominance in oceanic gyres, with decreases in Prochlorococcus abundances towards temperate waters where Synechococcus flourishes, and an emergence of picoeukaryotes in temperate waters. Fine-scale in-situ sampling across ocean fronts provided a large dynamic range of measurements for the training dataset, which resulted in the successful detection of fine-scale Synechococcus patches. Satellite implementation of the models showed good performance (R(exp 2) > 0.50) when validated against in-situ data from six Atlantic Meridional Transect cruises. The improved relative performance of the hyperspectral models highlights the importance of future high spectral resolution satellite instruments, such as the NASA PACE mission’s Ocean Color Instrument, to extend our spatiotemporal knowledge about ecologically relevant phytoplankton assemblages.

Priscila Kienteca Lange↗
NASA NTRSDate not supplied

Inflight Medical Conditions Risk – Overview and Strategic Approach

The risk of adverse health outcomes and decrements in performance due to inflight medical conditions is among NASA’s “red” risks for Mars missions, scored at the highest likelihood and consequence on the rating scale. Importantly, this risk encompasses all possible medical conditions that might occur in spaceflight. At thesame time, exploration spaceflight will have significant resource constraints (mass, power, volume, data, etc.) and supplying the full complement of medical capabilities available on Earth will be impossible. Inevitably, medical conditions will develop during a human Mars mission and having inadequate inflight capabilities will have a negative impact on the health and performance of the astronauts, leading to adverse crew and/or mission outcomes.

B D Easter↗