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At least 739 records · Page 41

Exploring color-octet scalar parameter space in minimal R-symmetric models

In this work we study the collider phenomenology of color-octet scalars (sgluons) in minimal supersymmetric models endowed with a global continuous R symmetry. We systematically catalog the significant decay channels of scalar and pseudoscalar sgluons and identify novel features that are natural in these models. These include decays in nonstandard diboson channels, such as to a gluon and a photon; three-body decays with considerable branching fractions; and long-lived particles with displaced vertex signatures. We also discuss the single and pair production of these particles and show that they can evade existing constraints from the Large Hadron Collider, to varying extents, in large regions of reasonable parameter space. We find, for instance, that a 725 GeV scalar and a 350 GeV or lighter pseudoscalar can still be accommodated in realistic scenarios.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Compressed Liquid (${{p}}$-${{\rho}}$-${{T}}$) Measurements of trans-1,2-Dichloroethene [R-1130(E)]

Pressure-density-temperature (${{p}}$-${{\rho}}$-${{T}}$) data for the refrigerant R-1130(E) (trans-1,2-dichloroethene) were measured in the compressed liquid phase using an automated vibrating-tube densimeter. Overall, the measurements covered temperatures from 270 K to 410 K and pressures from 0.5 MPa to 30 MPa. Relative combined, expanded (95% confidence level) uncertainties ranged from approximately 0.05% to 0.06%. Here, we present measurement results, along with comparisons to available literature data and to a generalized extended corresponding states model.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Special Issue from the Advances in Fossil Energy R&D topical sessions held at the 2019 American Institute of Chemical Engineers Annual Fall Meeting

This special issue entitled “Catalysis for Energy Related Activities” represents a collection of research works presented during the Advances in Fossil Energy R&D topical sessions at the 2019 American Institute of Chemical Engineers (AIChE) Annual Meeting in Orlando, Florida November 10–15, 2019.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Protein–protein interactions between tenascin-R and RPTPζ/phosphacan are critical to maintain the architecture of perineuronal nets

Neural plasticity, the ability to alter the structure and function of neural circuits, varies throughout the age of an individual. The end of the hyperplastic period in the central nervous system coincides with the appearance of honeycomb-like structures called perineuronal nets (PNNs) that surround a subset of neurons. PNNs are a condensed form of neural extracellular matrix that include the glycosaminoglycan hyaluronan and extracellular matrix proteins such as aggrecan and tenascin-R (TNR). PNNs are key regulators of developmental neural plasticity and cognitive functions, yet our current understanding of the molecular interactions that help assemble them remains limited. Disruption of Ptprz1, the gene encoding the receptor protein tyrosine phosphatase RPTPζ, altered the appearance of nets from a reticulated structure to puncta on the surface of cortical neuron bodies in adult mice. The structural alterations mirror those found in Tnr -/- mice, and TNR is absent from the net structures that form in dissociated cultures of Ptprz1 -/- cortical neurons. These findings raised the possibility that TNR and RPTPζ cooperate to promote the assembly of PNNs. Here, we show that TNR associates with the RPTPζ ectodomain and provide a structural basis for these interactions. Furthermore, we show that RPTPζ forms an identical complex with tenascin-C, a homolog of TNR that also regulates neural plasticity. Finally, we demonstrate that mutating residues at the RPTPζ–TNR interface impairs the formation of PNNs in dissociated neuronal cultures. Overall, this work sets the stage for analyzing the roles of protein–protein interactions that underpin the formation of nets.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Bringing forward the development of battery cells for automotive applications: Perspective of R&D activities in China, Japan, the EU and the USA

The recent development of high-performance Li-ion battery cells has sparked intensive revolutions in our society. After enabling the wireless communication, Li-ion batteries are paving the way towards a full transition to electromobility. However, the search and need for batteries with improved performance and safety at reduced cost is still ongoing. Therefore, substantial economical efforts are put in place. The 12th edition of the annual International Conference on Advanced Lithium Batteries for Automobile Applications (ABAA-12), held in October 2019 in Ulm, Germany, has been an insightful meeting during which policy makers from China, Germany, Japan, the European Commission and the USA provided an in-depth description of their respective visions on how to bring forward this technology. In this paper, we aim to give insights about the presented R&D trends and the current penetration of electric vehicles in the mass market.

25 ENERGY STORAGE↗

Implementation of the HEP instrumentation R&D roadmap in the USA

In recent years, the High Energy Physics (HEP) community in the USA has evaluated the technological needs in detector instrumentation for future HEP experiments. Specific needs have been identified and an R&D program to reach them has been defined. This article will briefly summarize the planning process and will highlight the main findings and the road map to carry out the plan as defined by the community.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Interplaying mechanisms behind inclusive jet R and extraction of jet energy loss distributions

The observed inclusive jet suppression in heavy-ion collisions at LHC has a very weak p T dependence over a large range of p T =50–1000 GeV and is almost independent of the colliding energy, though the initial energy density of the bulk medium has increased from √s=2.76 to 5.02 TeV by about 20%. This interesting phenomenon is investigated in the linear Boltzmann transport (LBT) model for jet propagation in an event-by-event 3+1D hydro background. We show that the p T dependence of jet R AA is determined by the initial spectrum in p+p collisions and p T dependence of jet energy loss. Furthermore, jet energy loss distributions for inclusive jet and γ-jet at both LHC energies are extracted directly from experimental data through the state-of-art Bayesian analysis. Additionally, the averaged jet energy loss has a weak p T dependence and the scaled jet energy loss distributions have a large width, both of which are consistent with the LBT simulations and indicate that jet quenching is caused by only a few out-of-cone jet medium scatterings.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Synthesis and characterization of the actinide tosylimido complexes [K(18-crown-6)][An(NSO 2 -$p$-tolyl)(NR 2 ) 3 ] (An = U, Th; R = SiMe 3 )

Reaction of 1 equiv of KN(H)Ts (Ts = p-MeC 6 H 4 SO 2 ) with the actinide metallacycles, [An IV (CH 2 SiMe 2 NSiMe 3 )(NR 2 ) 2 ] (An = U, Th; R = SiMe 3 ), in the presence of 18-crown-6, affords the imido complexes, [K(18-crown-6)][An IV (NTs)(NR 2 ) 3 ] (An = U, 1; Th, 2), in modest to moderate yields after work-up. Both complexes were characterized by X-ray crystallography and 1 H and 13 C{ 1 H} NMR spectroscopies. To our knowledge, they represent the first sulfonylimido complexes reported for the f elements. Finally, they are also a rare example of an isostructural set of actinide imido complexes.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A theoretical study of the bonding properties of R 4 Sb 3 compounds

Here, this study investigates the electronic structure and bonding properties of rare-earth antimonide compounds, specifically Yb 4 Sb 3 and La 4 Sb 3 , utilizing density functional theory calculations. The analysis reveals that Yb 4 Sb 3 exhibits a predominantly ionic character whereas La 4 Sb 3 displays a greater degree of covalent bonding. Moreover, the presence of divalent ytterbium leads to p-type conduction at high temperatures in Yb 4 Sb 3 . Conversely, La 4 Sb 3 displays n-type conduction because of a larger electronic transfer from the rare-earth metal towards antimony. These findings provide valuable insights into the structural and electronic properties that govern the performance of R 4 Sb 3 compounds, contributing to the development of advanced materials for thermoelectric energy conversion.

36 MATERIALS SCIENCE↗

Effect of oxidation post treatments on TiO 2 coating manufactured using reactive very low-pressure plasma spraying (R-VLPPS)

TiO 2 coatings manufactured using reactive very low-pressure plasma spraying (R-VLPPS) were analyzed in different regions related to their position compared to the plasma flame. For that, a screen was used in order to hide an area of the substrate from the direct plasma flux. The coating morphology changed from quasi lamellar structure to highly vapor structure and coatings exhibited obvious modifications in terms of phases and mechanical properties. The effect of oxidation post treatment on the as sprayed coating was then studied by selecting two methods: in situ oxidation post treatment and classical thermal treatment. The two post treatments provided an increase of the main rutile phase and a decrease of both the size and the contents of porosity simultaneously.

36 MATERIALS SCIENCE↗

Protocol to detect dilution cycles in chemostat experiments and estimate growth rate slopes with linear modeling with R software chemostat_regression

Chemostat growth chambers measure optical density over time and require manual calculation of growth rates. Here, we present chemostat_regression, R software that enables users to automatically identify chemostat cycles and estimate growth rate using a linear regression approach. We describe steps for creating requisite software environment(s), formatting input data, executing the software via command line/RStudio/R-Shiny, interpreting results, assessing the validity of results, and modifying input parameters.

59 BASIC BIOLOGICAL SCIENCES↗

R –8 Dispersion Interaction: Derivation and Application to the Effective Fragment Potential Method

The anisotropic and isotropic R –8 dispersion contributions (disp8) are derived and implemented within the framework of the effective fragment potential (EFP) method formulated with imaginary frequency-dependent Cartesian polarizability tensors distributed at the centroids of the localized molecular orbitals (LMOs). Two forms of damping functions, intermolecular overlap-based and Tang–Toennies, are extended for disp8. To obtain LMO polarizability tensors centered at LMO centroids, an origin-shifting transformation is derived and implemented for the dipole–octopole polarizability tensor and the quadrupole–quadrupole polarizability tensor. The analytic gradient is derived and implemented for the isotropic disp8 contribution. Relative to the previously implemented empirical EFP disp8 energy, the isotropic disp8 component of the interaction energy improves the overall agreement of the EFP dispersion energies with the symmetry-adapted perturbation theory (SAPT) benchmarks, reducing the mean absolute errors (MAEs) and mean absolute percentage errors for most of the databases examined in this work. Further, while the anisotropic disp8 can further enhance the accuracy of the EFP dispersion energy and yield smaller MAEs, significantly overbound dispersion energies are predicted by the anisotropic disp8 when the maximum element in the intermolecular overlap matrix is greater than 0.1, possibly due to the breakdown of the approximations made in the EFP dispersion derivation at a short range. For potential energy scan databases, the newly developed EFP dispersion model with isotropic disp8 yields the overall correct curvature and good agreement with SAPT benchmarks around equilibrium and longer but overestimates the dispersion interactions at a short range. While the overlap-based dispersion-damping functions produce better MAEs than Tang–Toennies damping functions, further improvement is needed to better screen the large attractive dispersion energies at a short range (overlap >0.1).

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TopPICR: A Companion R Package for Top-Down Proteomics Data Analysis

Top-down proteomics is the analysis of proteins in their intact form without proteolysis, thus preserving valuable information about post-translational modifications, isoforms, and proteolytic processing. However, it is still a developing field due to limitations in the instrumentation, difficulties with interpretation of complex mass spectra, and a lack of well-established quantification approaches. TopPIC is one of the popular tools for proteoform identification. Here we extended its capabilities into label-free proteoform quantification by developing a companion R package (TopPICR). Key steps in the TopPICR pipeline include filtering identifications, inferring a minimal set of protein accessions explaining the observed sequences, aligning retention times, recalibrating measured masses, clustering features across datasets, and finally compiling feature intensities using the match-between-runs approach. The output of the pipeline is an MSnSet object which makes downstream data analysis seamlessly compatible with packages from the Bioconductor project. It also provides the capability for visualizing proteoforms within the context of the parent protein sequence. The functionality of TopPICR is demonstrated on top-down LC-MS/MS datasets of 10 human-in-mouse xenografts of luminal and basal breast tumor samples.

59 BASIC BIOLOGICAL SCIENCES↗

fluxfinder: An R Package for Reproducible Calculation and Initial Processing of Greenhouse Gas Fluxes From Static Chamber Measurements

Fluxes of greenhouse gases are a critical component of the earth's natural climate, but anthropogenic emissions have created an imbalance and resulted in global climate change. Quantifying the emission of these gases is vital to our understanding of their sources and sinks, both natural and anthropogenic. The static chamber method, in which a system of interest is enclosed, and gas concentrations are measured over time, is widely used to estimate fluxes of greenhouse gases. With the development of instruments such as infrared gas analyzers (IRGAs) supporting high-frequency concentration data, there is a growing need for open-source workflows to calculate fluxes. Here we present fluxfinder, an R package designed to support reproducible calculations and processing of greenhouse gas fluxes measured with the static chamber method. The package includes raw data file parsing from widely used IRGAs, metadata matching, unit conversion, flux estimations, and initial quality assurance/quality control (QA/QC). Diagnostic graphical plots provide a transparent way to differentiate between measurement issues and nonlinear behavior. The package is also designed to be easily integrated with the gasfluxes package for further fitting of nonlinear concentration-time models, allowing alternative or additional flux QA/QC. The fluxfinder package offers a flexible workflow that is easily adaptable to promote open and reproducible greenhouse gas flux estimations.

Wilson, Stephanie J.↗

ExpoKids: An R-based tool for characterizing aggregate chemical exposure during childhood

Background: Aggregate exposure, the combined exposures to a single chemical from all pathways, is a critical children’s health issue. Objective: The primary objective is to develop a tool to illustrate potential differences in aggregate exposure at various childhood lifestages and the adult lifestage. Methods: We developed ExpoKids (an R-based tool) using oral exposure estimates across lifestages generated by US EPA’s Exposure Factors Interactive Resource for Scenarios Tool (ExpoFIRST). Results: ExpoKids is applied to illustrate aggregate oral exposure, for ten media, as average daily doses (ADD) and lifetime average daily doses (LADD) in five graphs organized across seven postnatal childhood lifestages and the adult lifestage. This data visualization tool conveys ExpoFIRST findings, from available exposure data, to highlight the relative contributions of media and lifestages to chemical exposure. To evaluate the effectiveness of ExpoKids, three chemical case examples (di[2-ethylhexyl] phthalate [DEHP], manganese, and endosulfan) were explored. Data available from the published literature and databases for each case example were used to explore research questions regarding media and lifestage contributions to aggregate exposure. Significance: These illustrative case examples demonstrate ExpoKids’ versatile application to explore a diverse set of children’s health risk assessment and management questions by visually depicting specific media and lifestage contributions to aggregate exposure.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Dimerization and ring-opening in bis(diisopropylamino)cyclopropenylidene (BAC) mediated by [U(NR 2 ) 3 (CCPh)] (R = SiMe 3 )

Here the addition of 2 equiv. of bis(diisopropylamino)cyclopropenylidene (BAC) to [U(NR 2 ) 3 (CCPh)] (1, R = SiMe 3 ), in Et 2 O, results in formation of [cyclo-N(iPr)C(Me) 2 CH(NiPr 2 )C{[double bond, length as m-dash]CHC 3 (NiPr 2 ) 2 }][U(NR 2 ) 2 (N(SiMe 3 )SiMe 2 CH 2 )(CCPh)] (2) in moderate isolated yield. Complex 2 is the result of coupling and protonation of two BAC molecules, where complex 1 contributes the required proton. It was characterized by NMR spectroscopy and X-ray crystallography and represents a new mode of reactivity of the cyclopropenylidene fragment.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗