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At least 739 records · Page 41

Use of visible, near-infrared, and thermal infrared remote sensing to study soil moisture

Two methods are described which are used to estimate soil moisture remotely using the 0.4- to 14.0 micron wavelength region: (1) measurement of spectral reflectance, and (2) measurement of soil temperature. The reflectance method is based on observations which show that directional reflectance decreases as soil moisture increases for a given material. The soil temperature method is based on observations which show that differences between daytime and nighttime soil temperatures decrease as moisture content increases for a given material. In some circumstances, separate reflectance or temperature measurements yield ambiguous data, in which case these two methods may be combined to obtain a valid soil moisture determination. In this combined approach, reflectance is used to estimate low moisture levels; and thermal inertia (or thermal diffusivity) is used to estimate higher levels. The reflectance method appears promising for surface estimates of soil moisture, whereas the temperature method appears promising for estimates of near-subsurface (0 to 10 cm).

Blanchard, M. B.↗

Use of visible, near-infrared, and thermal infrared remote sensing to study soil moisture

Two methods are used to estimate soil moisture remotely using the 0.4- to 14.0-micron wavelength region: (1) measurement of spectral reflectance, and (2) measurement of soil temperature. The reflectance method is based on observations which show that directional reflectance decreases as soil moisture increases for a given material. The soil temperature method is based on observations which show that differences between daytime and nighttime soil temperatures decrease as moisture content increases for a given material. In some circumstances, separate reflectance or temperature measurements yield ambiguous data, in which case these two methods may be combined to obtain a valid soil moisture determination. In this combined approach, reflectance is used to estimate low moisture levels; and thermal inertia (or thermal diffusivity) is used to estimate higher levels. The reflectance method appears promising for surface estimates of soil moisture, whereas the temperature method appears promising for estimates of near-subsurface (0 to 10 cm).

Blanchard, M. B.↗

Improving Land Cover Product-Based Estimates of the Extent of Fragmented Cover Types

The effects of changing land use/land cover on regional and global climate ecosystems depends on accurate estimates of the extent of critical land cover types such as Arctic wetlands and fire scars in boreal forests. To address this information requirement, land cover products at coarse spatial resolution such as Advanced Very High Resolution Radiometer (AVHRR) -based maps and the MODIS Land Cover Product are being produced. The accuracy of the extent of highly fragmented cover types such as fire scars and ponds is in doubt because much (the numerous scars and ponds smaller than the pixel size) is missed. A promising method for improving areal estimates involves modeling the observed distribution of the fragment sizes as a type of truncated distribution, then estimating the sum of unobserved sizes in the lower, truncated tail and adding it to the sum of observed fragment sizes. The method has been tested with both simulated and actual cover products.

Hlavka, Christine A.↗

Using Lunar Observations to Validate Pointing Accuracy and Geolocation, Detector Sensitivity Stability and Static Point Response of the CERES Instruments

Validation of in-orbit instrument performance is a function of stability in both instrument and calibration source. This paper describes a method using lunar observations scanning near full moon by the Clouds and Earth Radiant Energy System (CERES) instruments. The Moon offers an external source whose signal variance is predictable and non-degrading. From 2006 to present, these in-orbit observations have become standardized and compiled for the Flight Models -1 and -2 aboard the Terra satellite, for Flight Models-3 and -4 aboard the Aqua satellite, and beginning 2012, for Flight Model-5 aboard Suomi-NPP. Instrument performance measurements studied are detector sensitivity stability, pointing accuracy and static detector point response function. This validation method also shows trends per CERES data channel of 0.8% per decade or less for Flight Models 1-4. Using instrument gimbal data and computed lunar position, the pointing error of each detector telescope, the accuracy and consistency of the alignment between the detectors can be determined. The maximum pointing error was 0.2 Deg. in azimuth and 0.17 Deg. in elevation which corresponds to an error in geolocation near nadir of 2.09 km. With the exception of one detector, all instruments were found to have consistent detector alignment from 2006 to present. All alignment error was within 0.1o with most detector telescopes showing a consistent alignment offset of less than 0.02 Deg.

Daniels, Janet L.↗

The presence of field geologists in Mars-like terrain

Methods of ethnographic observation and analysis have been coupled with object-oriented analysis and design concepts to begin the development of a clear path from observations in the field to the design of virtual presence systems. The existence of redundancies in field geology and presence allowed for the application of methods for understanding complex systems. As a result of this study, some of these redundancies have been characterized. Those described are all classes of continuity relations, including the continuities of continuous existence, context-constituent continuities, and state-process continuities. The discussion of each includes statements of general relationships, logical consequences of these, and hypothetical situations in which the relationships would apply. These are meant to aid in the development of a theory of presence. The discussion also includes design considerations, providing guidance for the design of virtual planetary exploration systems and other virtual presence systems. Converging evidence regarding continuity in presence is found in the nature of psychological dissociation. Specific methodological refinements should enhance ecological validity in subsequent field studies, which are in progress.

Mcgreevy, Michael W.↗

Method and system of filtering and recommending documents

Disclosed is a method and system for discovering documents using a computer and providing a small set of the most relevant documents to the attention of a human observer. Using the method, the computer obtains a seed document from the user and generates a seed document vector using term frequency-inverse corpus frequency weighting. A keyword index for a plurality of source documents can be compared with the weighted terms of the seed document vector. The comparison is then filtered to reduce the number of documents, which define an initial subset of the source documents. Initial subset vectors are generated and compared to the seed document vector to obtain a similarity value for each comparison. Based on the similarity value, the method then recommends one or more of the source documents.

97 MATHEMATICS AND COMPUTING↗

Interplanetary observational constraints on Alfven wave acceleration of the solar wind

Spacecraft and interplanetary remote sensing observations of wave spectra are used to constrain the possible role of Alfven waves in the acceleration of high-speed streams in the solar wind. The observations suggest a method for extrapolating the wave energy flux near 1 AU back to the sun in a way that accounts for dissipation. Applying this method both for typical parameters and in the case of a well-studied high-speed stream leads to the conclusion that the Alfven waves observed in the solar wind were not sufficiently energetic near the sun to accelerate the streams.

Roberts, D. A.↗

SU-F-I-24: Feasibility of Magnetic Susceptibility to Relative Electron Density Conversion Method for Radiation Therapy

Purpose: The aim of this study is to develop radiation treatment planning using magnetic susceptibility obtained from quantitative susceptibility mapping (QSM) via MR imaging. This study demonstrates the feasibility of a method for generating a substitute for a CT image from an MRI. Methods: The head of a healthy volunteer was scanned using a CT scanner and a 3.0 T MRI scanner. The CT imaging was performed with a slice thickness of 2.5 mm at 80 and 120 kV (dual-energy scan). These CT images were converted to relative electron density (rED) using the CT-rED conversion table generated by a previous dual-energy CT scan. The CT-rED conversion table was generated using the conversion of the energy-subtracted CT number to rED via a single linear relationship. One T2 star-weighted 3D gradient echo-based sequence with four different echo times images was acquired using the MRI scanner. These T2 star-weighted images were used to estimate the phase data. To estimate the local field map, a Laplacian unwrapping of the phase and background field removal algorithm were implemented to process phase data. To generate a magnetic susceptibility map from the local field map, we used morphology enabled dipole inversion method. The rED map was resampled to the same resolution as magnetic susceptibility, and the magnetic susceptibility-rED conversion table was obtained via voxel-by-voxel mapping between the magnetic susceptibility and rED maps. Results: A correlation between magnetic susceptibility and rED is not observed through our method. Conclusion: Our results show that the correlation between magnetic susceptibility and rED is not observed. As the next step, we assume that the voxel of the magnetic susceptibility map comprises two materials, such as water (0 ppm) and bone (-2.2 ppm) or water and marrow (0.81ppm). The elements of each voxel were estimated from the ratio of the two materials.

60 APPLIED LIFE SCIENCES↗

A processing method and results of meteor shower radar observations

Studies of meteor showers permit the solving of some principal problems of meteor astronomy: to obtain the structure of a stream in cross section and along its orbits; to retrace the evolution of particle orbits of the stream taking into account gravitational and nongravitational forces and to discover the orbital elements of its parent body; to find out the total mass of solid particles ejected from the parent body taking into account physical and chemical evolution of meteor bodies; and to use meteor streams as natural probes for investigation of the average characteristics of the meteor complex in the solar system. A simple and effective method of determining the flux density and mass exponent parameter was worked out. This method and its results are discussed.

Belkovich, O. I.↗

Possible flexural signatures around Olympus and Ascraeus Montes, Mars

The effective elastic thickness (h) of the lithosphere provides a measure of the thermal and mechanical state of a planet's shallow interior. An estimate of h in the vicinity of a feature that constitutes a load on a planetary surface can be determined from the flexural response of the lithosphere to the load. This approach has been applied to Mars by calculating radial stresses associated with lithospheric flexure associated with surface loads, and comparing the results to the positions of circumferential graben surrounding the major Martian shield volcanoes and mascon basins. However, many prominent surface loads on Mars, most notably the Olympus Mons volcano, do not exhibit flexural graben. In these instances application of the above method can provide only a lower limit of effective elastic thickness. An alternative method of determining h is to calculate the vertical displacements associated with the flexural loading and to compare the amplitude and shape of the flexural profile to observed topography. This method has not been applied to flexural problems on Mars because of the poor resolution of Martian topographic data. However, previous analyses have shown that the lithosphere around major volcanic shields should exhibit vertical deflections of order 1 km over horizontal baselines of order 100 km. We were thus motivated to search for the presence of flexural troughs in the existing Mars topography data.

Zuber, M. T.↗

Impact of Design Factors for ESA CCI Satellite Soil Moisture Data Assimilation over Europe

In this study, soil moisture retrievals of the combined active–passive ESA Climate Change Initiative (CCI) soil moisture product are assimilated into the Noah-MP land surface model over Europe using a one-dimensional ensemble Kalman filter and an 18-yr study period. The performance of the data assimilation (DA) system is evaluated by comparing it with a model-only experiment (at in situ sites) and by assessing statistics of innovations and increments as DA diagnostics (over the entire domain). For both assessments, we explore the impact of three design choices, resulting in the following insights. 1) The magnitude of the assumed observation errors strongly affects the skill improvements evaluated against in situ stations and internal diagnostics. 2) Choosing between climatological or monthly cumulative distribution function matching as the observation bias correction method only has a marginal effect on the in situ skill of the DA system. However, the internal diagnostics suggest a more robust system parameterization if the observations are rescaled monthly. 3) The choice of atmospheric reanalysis dataset to force the land surface model affects the model-only skill and the DA skill improvements. The model-only skill is higher with input from the MERRA-2 than with input from the ERA5 reanalysis, resulting in larger DA skill improvements for the latter. Additionally, we show that the added value of the DA strongly depends on the quality of the satellite retrievals and land cover, with the most substantial soil moisture skill improvements occurring over croplands and skill degradation occurring over densely forested areas.

Soil moisture↗

Machine Learning Algorithms for Matching Theories, Simulations, and Observations in Cosmology (Final Project)

The search for simple and elegant equations to explain and predict observable natural phenomena has been a driving force in scientific theory for several centuries. The great successes of Newton's laws, Maxwell's equations, the Schrodinger equation, and the theory of General Relativity have encouraged this perspective, and perhaps a beautiful equation comprising a “theory of everything” remains to be discovered. But now scientists are grappling with systems of ever-increasing complexity, fraught with nonlinearity, and with the quantities of interest often only indirectly observed. Nature may resist a simple description, and the most important discoveries of the next century may be complex theories with countless variables and parameters. The era of big data opens up a promising new approach to scientific discovery in this setting. The predictions of modern theories, even if complex or nonlinear, can be examined through detailed and computationally-intensive simulations that take days or weeks to run and fill petabytes of disk space. The upcoming generation of scientific instruments will provide petabytes of observations at unprecedented resolution and depth. The challenge is to compare data to simulations so as to test theories and identify those that best match the observations. The data are numerous and rich but are subject to noise and various systematic biases. The simulations are large and detailed but are so costly that the effective sample size is small. Moreover, the mapping from data to simulation to the parameters of interest is typically complicated and ill-conditioned. Although these challenges, and the solutions we propose, apply across the sciences, we will ground our efforts by focusing on cosmology. Here, we are truly entering the era of big data in several senses. Ever larger experiments survey larger and larger cosmological volumes, resulting in enormous amounts of pixel data to process and extract the information of cosmological interest. These include large imaging surveys, which collect all the light in broad wavelength ranges over significant fractions of the sky, and spectroscopic surveys, which measure the light as a function of wavelength to map out 3D distances. These experiments are designed to shed light on the big unanswered questions in cosmology. Distilling the petabytes of data into observed quantities for comparison with theory is a daunting task. But these large experiments do not only result in large amounts of data to analyze: if we wish to compare to theories of physics, then we need increasingly extensive predictions for the observed quantities as well, which requires ever-larger cosmological simulations that take substantial -- and at times prohibitive -- computational resources to produce. Our goal is to develop statistical and machine learning methods for using observed and simulated data to advance machine learning with applications cosmology. In particular, we focus our research efforts on the following tasks: The challenge for automated science is that it is computationally impossible and statistically dangerous to consider every possible model in order to find the best one. We will develop Bayesian Optimization based active-learning methods that accelerate both the execution of the simulations and the search for best-fitting parameters. The key idea is to make the simulations adaptive -- across resolutions, time, and parameters -- using the data to search as the simulation runs; Most ML methods operate on simple finite dimensional feature vectors. However, many cosmology and other science applications require ML methods that can operate on more complex objects as inputs or outputs such as functions, distributions, or sets and point clouds. Our goal is to develop efficient ML methods for this problem and demonstrate their applicability in Cosmology, Astrophysics, and other science problems.

79 ASTRONOMY AND ASTROPHYSICS↗

Post‐operative nausea and vomiting in bariatric surgery patients: an observational study

Background The risk of post‐operative nausea and vomiting (PONV) in patients undergoing bariatric surgery is unclear. The aim of the study was to investigate the risk of PONV and the use and effectiveness of PONV prophylaxis. Methods This prospective observational study included 74 patients undergoing bariatric surgery with total intravenous anaesthesia. Patients were given PONV prophylaxis based on published guidelines and a simplified PONV risk score. Perioperative data were collected and a questionnaire was used at 2, 4, 6, 24, 48 and 72 h after the operation to evaluate PONV. Data are presented as risk (%) with the 95% confidence interval. Results Sixty five per cent (54–75) of the patients experienced PONV in the first 24 post‐operative hours and the risk increased with the number of risk factors for PONV. PONV occurred in 78% (66–87) of women and 26% (12–49) of men during the first 24 h. In relation to the guidelines, one patient received suboptimal PONV prophylaxis, 23% received optimal prophylaxis and 76% supra‐optimal prophylaxis. The risk of PONV was 82% (59–94) with optimal prophylaxis and 59% (46–71) with supra‐optimal prophylaxis. Of all patients, 34% (24–45) experienced severe PONV in the first 24 h that limited their activity. Conclusions The incidence of PONV in bariatric surgery patients was high despite a PONV prophylaxis regime following current guidelines. These results cast doubt as to the effectiveness of the usual PONV prophylaxis in this patient group and point to the need for further investigation of PONV prophylaxis and treatment in bariatric surgery patients.

Halliday, T. A.↗

The final COS-B database: In-flight calibration of instrumental parameters

A method for the determination of temporal variation of sensitivity is designed to find a set of parameters which lead to maximum consistency between the intensities derived from different observation periods. This method is briefly described and the resulting sensitivity and background variations presented.

Strong, A. W.↗

Incorporating Parallel Computing into the Goddard Earth Observing System Data Assimilation System (GEOS DAS)

Atmospheric data assimilation is a method of combining actual observations with model forecasts to produce a more accurate description of the earth system than the observations or forecast alone can provide. The output of data assimilation, sometimes called the analysis, are regular, gridded datasets of observed and unobserved variables. Analysis plays a key role in numerical weather prediction and is becoming increasingly important for climate research. These applications, and the need for timely validation of scientific enhancements to the data assimilation system pose computational demands that are best met by distributed parallel software. The mission of the NASA Data Assimilation Office (DAO) is to provide datasets for climate research and to support NASA satellite and aircraft missions. The system used to create these datasets is the Goddard Earth Observing System Data Assimilation System (GEOS DAS). The core components of the the GEOS DAS are: the GEOS General Circulation Model (GCM), the Physical-space Statistical Analysis System (PSAS), the Observer, the on-line Quality Control (QC) system, the Coupler (which feeds analysis increments back to the GCM), and an I/O package for processing the large amounts of data the system produces (which will be described in another presentation in this session). The discussion will center on the following issues: the computational complexity for the whole GEOS DAS, assessment of the performance of the individual elements of GEOS DAS, and parallelization strategy for some of the components of the system.

Larson, Jay W.↗

OperonSEQer: A set of machine-learning algorithms with threshold voting for detection of operon pairs using short-read RNA-sequencing data

Operon prediction in prokaryotes is critical not only for understanding the regulation of endogenous gene expression, but also for exogenous targeting of genes using newly developed tools such as CRISPR-based gene modulation. A number of methods have used transcriptomics data to predict operons, based on the premise that contiguous genes in an operon will be expressed at similar levels. While promising results have been observed using these methods, most of them do not address uncertainty caused by technical variability between experiments, which is especially relevant when the amount of data available is small. In addition, many existing methods do not provide the flexibility to determine the stringency with which genes should be evaluated for being in an operon pair. We present OperonSEQer, a set of machine learning algorithms that uses the statistic and p-value from a non-parametric analysis of variance test (Kruskal-Wallis) to determine the likelihood that two adjacent genes are expressed from the same RNA molecule. We implement a voting system to allow users to choose the stringency of operon calls depending on whether your priority is high recall or high specificity. In addition, we provide the code so that users can retrain the algorithm and re-establish hyperparameters based on any data they choose, allowing for this method to be expanded as additional data is generated. We show that our approach detects operon pairs that are missed by current methods by comparing our predictions to publicly available long-read sequencing data. OperonSEQer therefore improves on existing methods in terms of accuracy, flexibility, and adaptability.

59 BASIC BIOLOGICAL SCIENCES↗

Assimilation of AERONET and MODIS AOT Observations Using Variational and Ensemble Data Assimilation Methods and Its Impact on Aerosol Forecasting Skill

Data assimilation of Aerosol Robotic Network (AERONET) and Moderate Resolution Imaging Spectroradiometer (MODIS) aerosol optical thickness (AOT) for aerosol forecasting was tested within the Navy Aerosol Analysis Prediction System (NAAPS) framework, using variational and ensemble data assimilation methods. Navy aerosol forecasting currently makes use of a deterministic NAAPS simulation coupled to Navy Variational Data Assimilation System for aerosol optical depth, a two-dimensional variational data assimilation system, for MODIS AOT assimilation. An ensemble version of NAAPS (ENAAPS) coupled to an ensemble adjustment Kalman filter (EAKF) from the Data Assimilation Research Testbed was recently developed, allowing for a range of data assimilation and forecasting experiments to be run with deterministic NAAPS and ENAAPS. The main findings are that the EAKF, with its flow-dependent error covariances, makes better use of sparse observations such as AERONET AOT. Assimilating individual AERONET observations in the two-dimensional variational system can increase the analysis errors when observations are located in high AOT gradient regions. By including AERONET with MODIS AOT assimilation, the magnitudes of peak aerosol events (AOT> 1) were better captured with improved temporal variability, especially in India and Asia where aerosol prediction is a challenge. Assimilating AERONET AOT with MODIS had little impact on the 24 h forecast skill compared to MODIS assimilation only, but differences were found downwind of AERONET sites. The 24 h forecast skill was approximately the same for forecasts initialized with analyses from AERONET AOT assimilation alone compared to MODIS assimilation, particularly in regions where the AERONET network is dense; including the United States and Europe, indicating that AERONET could serve as a backup observation network for over-land synoptic-scale aerosol events.

Rubin, Juli I.↗

Estimation of Turbulence Parameters from Scanning Lidars and in-situ Instrumentation in the Perdigao 2017 Campaign

The understanding of the sources, spatial distribution and temporal variability of turbulence in the atmospheric boundary layer (ABL) and improved simulation of its forcing processes require observations in a broad range of terrain types and atmospheric conditions. In this study, we estimate turbulence kinetic energy (TKE) dissipation rate using multiple techniques, including traditional in-situ measurements of sonic anemometers on meteorological towers, a hot-wire anemometer on a tethered lifting system (TLS), as well as remote-sensing retrievals from a vertically staring lidar and two lidars performing range-height indicator (RHI) scans. For the retrieval of e from the lidar RHI scans, we introduce a modification of the Doppler Spectral Width (DSW) method. This method uses spatio-temporal averages of the variance of the line-of-sight (LOS) velocity and the turbulent broadening of the Doppler backscatter spectrum. We validate this method against the observations from the other instruments, also including uncertainty estimations for each method. The synthesis of the results from all instruments enables a detailed analysis of the spatial and temporal variability of e across a valley between two parallel ridges at the Perdigao 2017 campaign. We find that the shear zones above and below nighttime low-level jets (LLJ) experience turbulence enhancements, as does the wake of a wind turbine (WT). We analyze in detail how e varies in the early morning of 14 June 2017, when the turbulence in the valley, approximately eleven rotor diameters downstream of the WT, is still significantly enhanced by the WT wake.

17 WIND ENERGY↗