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At least 739 records · Page 41

Joint Modeling of Quasar Variability and Accretion Disk Reprocessing Using Latent Stochastic Differential Equations

Quasars are bright active galactic nuclei powered by the accretion of matter around supermassive black holes at the center of galaxies. Their stochastic brightness variability depends on the physical properties of the accretion disk and black hole. The upcoming Rubin Observatory Legacy Survey of Space and Time (LSST) is expected to observe tens of millions of quasars, so there is a need for efficient techniques like machine learning that can handle the large volume of data. Quasar variability is believed to be driven by an X-ray corona, which is reprocessed by the accretion disk and emitted as UV/optical variability. We are the first to introduce an auto-differentiable simulation of the accretion disk and reprocessing. We use the simulation as a direct component of our neural network to jointly model the driving variability and reprocessing, trained with supervised learning on simulated LSST-like 10 yr quasar light curves. We encode the light curves using a transformer encoder, and the driving variability is reconstructed using latent stochastic differential equations, a physically motivated generative deep learning method that can model continuous-time stochastic dynamics. By embedding the physical processes of the driving signal and reprocessing into our network, we achieve a model that is more robust and interpretable. We demonstrate that our model outperforms a Gaussian process regression baseline and can infer accretion disk parameters and time delays between wave bands, even for out-of-distribution driving signals. Our approach provides a powerful framework that can be adapted to solve other inverse problems in multivariate time series.

Fagin, Joshua [City Univ. of New York (CUNY), NY (↗

Evaluation of a composite mobile holographic nondestructive test system

A simplified theoretical model for the interpretation of the double-exposure holographic interference fringe loci due to the general three-dimensional displacements was derived for the specific composite mobile holographic nondestructive test system. The model, representing a good approximation to a more tedious theoretical result, predicts that a combination of in-plane and out-of-plane displacements of the surface will produce concentric circular-shaped fringe patterns with locations of their center affected by the displacements. Appropriate experiments were designed and carried out for the test of the validity of the theory. These experiments include the taking of double-exposure holograms of in-plane translations and combined in-plane and out-of-plane translations. The simplified model agreed quite well with the experimental results. Experimentally observed effects due to the curvature of the test plate and the variations of the angles of incidence of the laser light suggest that in order for the simplified model to be able to predict the test results more accurately, incidence and reflection of the laser light should be chosen as nearly perpendicular to the surface of the tested object as possible.

Liu, H. K.↗

From minimum-viable-products to full models: a step-wise development of diagnostic forward models in support of design, analysis and modelling on the ST40 tokamak

Like most magnetic confined fusion experiments, the ST40 tokamak started off with a small subset of diagnostics and gradually increased the diagnostic set to include more complex and comprehensive systems. To make the most of each operational phase, forward models of various diagnostics are used and developed to aid design, provide consistency-checks during commissioning, test analysis methods, and build workflows to constrain high-level parameters to inform interpretation, theory and modelling. For new models and new analysis workflows, minimum-viable-products are released early, and their complexity is increased in a step-wise manner, facilitating the support of all programme phases on multiple parallel applications, while enabling learning opportunities and feedback loops. In this contribution we review the philosophy, scope and architecture of the framework under development. We discuss the details of some forward models, with examples on how they are used to aid diagnostic design, to investigate analysis methodologies through synthetic data, and how they are embedded in experimental analysis workflows. We compare previously published experimental results with new, more advanced analysis workflows employing more recent, detailed models and new diagnostic data, providing confirmation of the published material from the 2021–22 experimental campaign.

integrated data analysis↗

Theoretical models of polar-cap convection under the influence of a northward interplanetary magnetic field

The unexpected patterns of high-latitude auroral luminosity and ionospheric convection that are observed when the interplanetary magnetic field (IMF) has a northward orientation have inspired a variety of theoretical interpretations. The existing models, all referring to steady-state conditions, can be classified according to the topology of the polar magnetic field lines and of the polar-cap convection streamlines. The classes of model include: (1) a closed magnetosphere model, (2) a conventional open model with a distorted, but topologically unchanged, polar-cap boundary, (3) a conventional open model with distorted, but topologically unchanged, polar-cap convection cells, (4) a modified open model with 'lobe convection cells' contained wholly on open magnetic-field lines, and (5) a modified open model with a bifurcated polar cap. The third and fourth types require significant regions of sunward flow on open polar-cap field lines, a concept that presents serious theoretical difficulties. The other three types appear equally viable from a theoretical point of view, and the comparison against observations is an ongoing enterprise. Outstanding theoretical questions include (a) how do observed structures in the polar ionosphere map along magnetic field lines into the magnetosphere?, (b) what is the mechanism that drives the observed sunward convection at highest latitudes on the day side?, and (c) what role does time dependence play in the observed phenomena?

Hill, T. W.↗

Mantle Plume Magmatism in Elysium Planitia as Constrained by InSight Seismic Observations

Based on cratering statistics, there has been active volcanism in the last 100 Ma and possibly the last 1 to 10 Ma in both central Elysium Planitia and in the Cerberus Fossae region of south-eastern Elysium. Seismic measurements by the InSight mission show a strong concentration of seismicity in Cerberus Fossae which are interpreted as due to magma transport along dike systems. Together, these observations strongly support the existence of geologically recent and possibly of currently active magmatism in Elysium. InSight seismic observations were also used to construct seismic velocity models for the martian mantle. These models are effectively a regional aver-age of the seismic velocity structure for the Elysium region, where both the InSight lander and most of the measured seismic events are located. These seismic velocity models have been interpreted in terms of the lithospheric thickness and mantle potential temperature. Khan et al. found a lithospheric thickness of 400 to 600 km and a mantle potential temperature of 1325 to 1425 °C. Durán et al. found a lithospheric thickness of ~450 km and a mantle potential tempera-ture of 1375-1475 °C. Drilleau et al. found a thermal lithosphere of 420-660 km and a mantle potential temperature of 1380-1560 °C. In this study, we combine these InSight seismic observations with finite element mantle plume magma production models to place new constraints on the properties of the mantle beneath Elysium Planitia.

Walter S Kiefer↗

L-VISP: LSTM Visualization for Interpretable Symptom Prediction in Patient Cohorts

Symptom modelling in head and neck cancer is challenged by the complexity of heterogeneous patient data, leading to an interest in deep learning approaches. Although Long Short-Term Memory Networks (LSTMs) have shown great results in patient risk prediction, their low interpretability requires data modellers to collaborate with clinical experts to validate the results. We present L-VISP, a human–machine solution that uses visual analytics for LSTM modelling in clinical research. L-VISP uses custom visual encodings to make multiple LSTM variants interpretable, supporting a full range of analysis, from understanding model operations and evaluating performance to interpreting results in a clinical context. We evaluate L-VISP with data modellers and a clinical oncologist and present the takeaways from this multidisciplinary collaboration.

LSTM modeling↗

Beginner's Guide to Understanding Power System Model Results for Long-Term Resource Plans

This presentation summarizes a recently published beginner's guide for understanding power system model results for long-term resource plans. This guide is designed to improve decision-making in the electricity planning process by strengthening dialogue between system planners and relevant stakeholders. It focuses on interpreting scenario results generated by power system planning models. These results are often used to inform integrated resource plans, which are long-term plans for a utility to meet future electricity requirements. Whether you are a state utility commissioner, commission staff, part of a state energy office, an intervenor in the planning process, or another stakeholder, this guide is designed to help you better weigh in on the modeling methods or interpret the model results to improve decision-making. This guide can enhance your understanding to ask the right questions, which can enable better understanding of results and key assumptions, data, and methods.

ENERGY PLANNING, POLICY, AND ECONOMY↗

Deep learning integrates histopathology and proteogenomics at a pan-cancer level

We introduce a pioneering approach that integrates pathology imaging with transcriptomics and proteomics to identify predictive histology features associated with critical clinical outcomes in cancer. We utilize 2,755 H&E-stained histopathological slides from 657 patients across 6 cancer types from CPTAC. Our models effectively recapitulate distinctions readily made by human pathologists: tumor vs. normal (AUROC = 0.995) and tissue-of-origin (AUROC = 0.979). We further investigate predictive power on tasks not normally performed from H&E alone, including TP53 prediction and pathologic stage. Importantly, we describe predictive morphologies not previously utilized in a clinical setting. The incorporation of transcriptomics and proteomics identifies pathway-level signatures and cellular processes driving predictive histology features. Model generalizability and interpretability is confirmed using TCGA. We propose a classification system for these tasks, and suggest potential clinical applications for this integrated human and machine learning approach. A publicly available web-based platform implements these models.

60 APPLIED LIFE SCIENCES↗

Physical properties of Oxia/Lunae Planum and Arabia-type units in the central equatorial region of Mars

Classification and mapping of surficial units in the central equatorial region of Mars Consortium data identified the relatively dark but 'red' materials that cover Lunae Planum and surround the Meridiani materials of Oxia Palus inertia region of Arabia. Oxia Province consists of the regions dominated by the characteristically dark 'red' Oxia materials, but it includes darker streaks and splotches of relatively 'blue' Meridiani materials and brighter 'red' deposits of dust belonging to Eos Province (the bright 'red' border between Oxia and regional Meridiani deposits to the south) and Xanthe Province (the moderately bright 'red' dust deposits in western Chryse Planitia and its vicinity, including the VL-1 landing site). Two Oxia units were recognized: a darker unit present on Lunae Planum and east of Oxia Palus that have intermediate to high inertias. Oxia Province surrounds the extremely low thermal inertia Arabia Province in the east part of the study area, and occurs as isolated patches within Arabia (often including splotches of Meridiani materials within the Oxia patches). Arabia Province's materials have been widely interpreted as unconsolidated dust deposits which are currently forming at this stage of Mars' precessional climate cycle, although the persistence of stable, moderately strong albedo contracts among Arabia materials has not been addressed in those models. A systematic interpretation of Oxia and Arabia Province materials based on currently available remote sensing data is given.

Strickland, Edwin L., III↗

Effects of random forest modeling decisions on biogeochemical time series predictions

Abstract Random forests (RF) are an increasingly popular machine learning approach used to model biogeochemical processes in the Earth system. While RF models are robust to many assumptions that complicate deterministic models, there are several important parameterization decisions for appropriate use and optimal model fit. We explored the role that parameter decisions, including training/testing data splitting strategies, variable selection, and hyperparameters play on RF goodness‐of‐fit by constructing models using 1296 unique parameter combinations to predict concentrations of nitrate, a key nutrient for biogeochemical cycling in aquatic ecosystems. Models were built on long‐term, publicly available water quality and meteorology time series collected by the National Estuarine Research Reserve monitoring network for two contrasting ecosystems representing freshwater and brackish estuaries. We found that accounting for temporal dependence when splitting data into training and testing subsets was key for avoiding over‐estimation of model predictive power. In addition, variable selection, the ratio of training to testing data, and to a lesser degree, variables per split and number of trees, were significant parameters for optimizing RF goodness‐of‐fit. We also explored how model parameter decisions influenced interpretation of the relative importance of predictors to the model, and model predictor‐dependent variable relationships, with results suggesting that both data structure and model parameterization influence these factors. Because much of the current RF literature is written for the computational and statistical science communities, the primary goal of this study is to provide guidelines for aquatic scientists new to machine learning to apply RF techniques appropriately to aquatic biogeochemical datasets.

54 ENVIRONMENTAL SCIENCES↗

Effect of H{sup +} implantation on the optical properties of semi-insulating GaAs crystals in the IR spectral region

The optical properties of semi-insulating GaAs crystals subjected to multienergy hydrogen-ion implantation and treatment in a high-frequency electromagnetic field are studied in the infrared spectral region. It is established that such combined treatment provides a means for substantially increasing the transmittance of GaAs crystals to values characteristic of crystals of high optical quality. On the basis of analysis of the infrared transmittance and reflectance data, Raman spectroscopy data, and atomic-force microscopy data on the surface morphology of the crystals, a physical model is proposed to interpret the effects experimentally observed in the crystals. The model takes into account the interaction of radiation defects with the initial structural defects in the crystals as well as the effect of compensation of defect centers by hydrogen during high-frequency treatment.

36 MATERIALS SCIENCE↗

On Similarity Transformation and Geodetic Network Distortions Based on Doppler Satellite Observations

Models used in geodesy to transform two sets of coordinates are studied and distortions in geodetic networks are investigated. Commonly used transformation models are first reviewed and most of them are interpreted. Differences between various models are discussed. Pitfalls in partial solutions are then considered. It is shown that only as many chords and/or directional elements can be used in the computation as are needed to completely determine the size or shape of the polyhedron implied in the set of Cartesian coordinates. Each additional element causes the normal matrix to be singular provided that all correlations between the chords are used. A number of tables and maps indicating distortions in the NAD 27, Precise Traverse M-R '72, AUS, and SAD 69 geodetic datums are also included. The residuals of the coordinates are scanned for systematic patterns after transforming each geodetic system to the NWL9D Doppler system. Also, an attempt is made to show scale distortions in the NAD 27.

Leick, Alfred↗

Use of Dynamically Scaled Models for Studies of the High-Angle-of-Attack Behavior of Airplanes

Dynamically scaled, free-flying models are used by the National Aeronautics and Space Administration (NASA) to study the stalling and spinning characteristics of civil and military airplane configurations. Such tests have been conducted for many different designs, and it has been possible to correlate the results predicted by the model tests with flight test results obtained in the investigations. The present paper describes four of the dynamic model testing techniques used at the NASA Langley Research Center, including the scaling laws used in the construction of models and in the interpretation of results. Predictions of stall/spin behavior based on model results have generally been very accurate, and the model tests are regarded as an invaluable precursor to full-scale flight tests. However, aerodynamic scale effects between some models and full-scale airplanes due to differences in test values of Reynolds number have resulted in erroneous predictions for a few configurations. A discussion of these effects is provided, together with the approach used to modify the model so that its behavior more closely matches that of the airplane. Finally, two typical applications of the techniques to the X-29A research airplane and several general aviation research airplanes are presented to illustrate the type of information provided by the tests.

Joseph R Chambers↗

Use of dynamically scaled models for studies of the high-angle-of-attack behavior of airplanes

Dynamically scaled, free-flying models are used by the National Aeronautics and Space Administration (NASA) to study the stalling and spinning characteristics of civil and military airplane configurations. Such tests have been conducted for many different designs, and it has been possible to correlate the results predicted by the model tests with flight test results obtained in the investigations. The present paper describes four of the dynamic model testing techniques used at the NASA Langley Research Center, including the scaling laws used in the construction of models and in the interpretation of results. Predictions of stall/spin behavior based on model results have generally been very accurate, and the model tests are regarded as an invaluable precursor to full-scale flight tests. However, aerodynamic scale effects between some models and full-scale airplanes due to differences in test values of Reynolds number have resulted in erroneous predictions for a few configurations. A discussion of these effects is provided, together with the approach used to modify the model so that its behavior more closely matches that of the airplane. Finally, two typical applications of the techniques to the X-29A research airplane and several general aviation research airplanes are presented to illustrate the type of information provided by the tests.

Joseph R Chambers↗

Stress and tectonics on Mars

Deformation of the Martian lithosphere and the various theoretical formulations used to model its behavior on local, regional, and global scales are studied. An overview of the various classes of tectonic features found on Mars is presented. The tectonic record on Mars, which provides the basic framework for interpreting theoretical thermomechanical models in terms of major tectonic events and provinces is summarized. The thickness of the elastic lithosphere is estimated using its response to local surface loads, and significant spatial variability is found, with values ranging from 20 to 300 km. A comparison of the major radial graben systems with theoretical stress models shows that more than one mechanism of lithospheric deformation is required to produce its enormous extent.

Banerdt, W. B.↗

Regional and Global Climate Response to Anthropogenic SO2 Emissions from China in Three Climate Models

We use the HadGEM3-GA4, CESM1, and GISS ModelE2 climate models to investigate the global and regional aerosol burden, radiative flux, and surface temperature responses to removing anthropogenic sulfur dioxide (SO2) emissions from China. We find that the models differ by up to a factor of 6 in the simulated change in aerosol optical depth (AOD) and shortwave radiative flux over China that results from reduced sulfate aerosol, leading to a large range of magnitudes in the regional and global temperature responses. Two of the three models simulate a near-ubiquitous hemispheric warming due to the regional SO2 removal, with similarities in the local and remote pattern of response, but overall with a substantially different magnitude. The third model simulates almost no significant temperature response. We attribute the discrepancies in the response to a combination of substantial differences in the chemical conversion of SO2 to sulfate, translation of sulfate mass into AOD, cloud radiative interactions, and differences in the radiative forcing efficiency of sulfate aerosol in the models. The model with the strongest response (HadGEM3-GA4) compares best with observations of AOD regionally, however the other two models compare similarly (albeit poorly) and still disagree substantially in their simulated climate response, indicating that total AOD observations are far from sufficient to determine which model response is more plausible. Our results highlight that there remains a large uncertainty in the representation of both aerosol chemistry as well as direct and indirect aerosol radiative effects in current climate models, and reinforces that caution must be applied when interpreting the results of modelling studies of aerosol influences on climate. Model studies that implicate aerosols in climate responses should ideally explore a range of radiative forcing strengths representative of this uncertainty, in addition to thoroughly evaluating the models used against observations.

sulfates↗

Veridical data science

Building and expanding on principles of statistics, machine learning, and scientific inquiry, we propose the predictability, computability, and stability (PCS) framework for veridical data science. Our framework, composed of both a workflow and documentation, aims to provide responsible, reliable, reproducible, and transparent results across the data science life cycle. The PCS workflow uses predictability as a reality check and considers the importance of computation in data collection/storage and algorithm design. It augments predictability and computability with an overarching stability principle. Stability expands on statistical uncertainty considerations to assess how human judgment calls impact data results through data and model/algorithm perturbations. As part of the PCS workflow, we develop PCS inference procedures, namely PCS perturbation intervals and PCS hypothesis testing, to investigate the stability of data results relative to problem formulation, data cleaning, modeling decisions, and interpretations. We illustrate PCS inference through neuroscience and genomics projects of our own and others. Moreover, we demonstrate its favorable performance over existing methods in terms of receiver operating characteristic (ROC) curves in high-dimensional, sparse linear model simulations, including a wide range of misspecified models. Finally, we propose PCS documentation based on R Markdown or Jupyter Notebook, with publicly available, reproducible codes and narratives to back up human choices made throughout an analysis. The PCS workflow and documentation are demonstrated in a genomics case study available on Zenodo.

97 MATHEMATICS AND COMPUTING↗

Hadronization of quarks and correlated di-hadron production in hard scattering

Understanding the dynamics of partons in general, and non perturbative sea, in particular, will be crucial for the understanding of strong interactions. Correlations of the spin of the target or/and the momentum and the spin of quarks, combined with final state interactions define the azimuthal distributions of produced particles. Production of correlated hadron pairs, in addition, will play an increasingly important role in the interpretation of pion electroproduction data in general, and hadronization process of quarks, in particular. More significant, than originaly anticipated, fraction of pions coming from correlated di-hadrons, indicated by recent CLAS12 measurements, and supported by various realistic models describing the hadronization process, may have a significant impact on various aspects of data analysis, including the modeling, composition, and interpretation of semi-inclusive DIS data, as well as calculations of radiative corrections. Studies of the nucleon structure beyond the traditional leading twist and current fragmentation of inclusive hadrons, provide qualitatively new tools to study the nucleon structure and extension of large x region well covered by JLab, to large Q2 at the EIC where it will be very important in interpretation of the data from JLab.

Avakian, Harut↗