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At least 739 records · Page 41

Positive selection moments identify potential functional residues in human olfactory receptors

Correlated mutation analysis and molecular models of olfactory receptors have provided evidence that residues in the transmembrane domains form a binding pocket for odor ligands. As an independent test of these results, we have calculated positive selection moments for the alpha-helical sixth transmembrane domain (TM6) of human olfactory receptors. The moments can be used to identify residues that have been preferentially affected by positive selection and are thus likely to interact with odor ligands. The results suggest that residue 622, which is commonly a serine or threonine, could form critical H-bonds. In some receptors a dual-serine subsite, formed by residues 622 and 625, could bind hydroxyl determinants on odor ligands. The potential importance of these residues is further supported by site-directed mutagenesis in the beta-adrenergic receptor. The findings should be of practical value for future physiological studies, binding assays, and site-directed mutagenesis.

Non-NASA Center↗

Correlation approach to identify coding regions in DNA sequences

Recently, it was observed that noncoding regions of DNA sequences possess long-range power-law correlations, whereas coding regions typically display only short-range correlations. We develop an algorithm based on this finding that enables investigators to perform a statistical analysis on long DNA sequences to locate possible coding regions. The algorithm is particularly successful in predicting the location of lengthy coding regions. For example, for the complete genome of yeast chromosome III (315,344 nucleotides), at least 82% of the predictions correspond to putative coding regions; the algorithm correctly identified all coding regions larger than 3000 nucleotides, 92% of coding regions between 2000 and 3000 nucleotides long, and 79% of coding regions between 1000 and 2000 nucleotides. The predictive ability of this new algorithm supports the claim that there is a fundamental difference in the correlation property between coding and noncoding sequences. This algorithm, which is not species-dependent, can be implemented with other techniques for rapidly and accurately locating relatively long coding regions in genomic sequences.

Non-NASA Center↗

New Inquiry into Distribution and Mechanism of Deep Moonquakes with Recently Identified Seismic Events

The objectives of the project were (1) to complete our preceding effort, supported by NASA grant NAGS-1 1619, of searching for deep moonquakes in the far hemisphere of the Moon among the seismic events detected by the Apollo seismic array; and (2) to re-examine the distribution and mechanism of deep moonquakes in the light of the newly identified deep moonquakes. The project was originally planned for completion in three years, of which only the first year, covered by this report, was funded. As a result, we were able to address only the first objective during the period, and the major part of the second objective was left for the future.

Nakamura, Yosio↗

Potential High-Temperature Shape-Memory Alloys Identified in the Ti(Ni,Pt) System

"Shape memory" is a unique property of certain alloys that, when deformed (within certain strain limits) at low temperatures, will remember and recover to their original predeformed shape upon heating. It occurs when an alloy is deformed in the low-temperature martensitic phase and is then heated above its transformation temperature back to an austenitic state. As the material passes through this solid-state phase transformation on heating, it also recovers its original shape. This behavior is widely exploited, near room temperature, in commercially available NiTi alloys for connectors, couplings, valves, actuators, stents, and other medical and dental devices. In addition, there are limitless applications in the aerospace, automotive, chemical processing, and many other industries for materials that exhibit this type of shape-memory behavior at higher temperatures. But for high temperatures, there are currently no commercial shape-memory alloys. Although there are significant challenges to the development of high-temperature shape-memory alloys, at the NASA Glenn Research Center we have identified a series of alloy compositions in the Ti-Ni-Pt system that show great promise as potential high-temperature shape-memory materials.

Noebe, Ronald D.↗

Sound Sources Identified in High-Speed Jets by Correlating Flow Density Fluctuations With Far-Field Noise

Noise sources in high-speed jets were identified by directly correlating flow density fluctuation (cause) to far-field sound pressure fluctuation (effect). The experimental study was performed in a nozzle facility at the NASA Glenn Research Center in support of NASA s initiative to reduce the noise emitted by commercial airplanes. Previous efforts to use this correlation method have failed because the tools for measuring jet turbulence were intrusive. In the present experiment, a molecular Rayleigh-scattering technique was used that depended on laser light scattering by gas molecules in air. The technique allowed accurate measurement of air density fluctuations from different points in the plume. The study was conducted in shock-free, unheated jets of Mach numbers 0.95, 1.4, and 1.8. The turbulent motion, as evident from density fluctuation spectra was remarkably similar in all three jets, whereas the noise sources were significantly different. The correlation study was conducted by keeping a microphone at a fixed location (at the peak noise emission angle of 30 to the jet axis and 50 nozzle diameters away) while moving the laser probe volume from point to point in the flow. The following figure shows maps of the nondimensional coherence value measured at different Strouhal frequencies ([frequency diameter]/jet speed) in the supersonic Mach 1.8 and subsonic Mach 0.95 jets. The higher the coherence, the stronger the source was.

Panda, Jayanta↗

Comparison of Orbital Parameters for GEO Debris Predicted by LEGEND and Observed by MODEST: Can Sources of Orbital Debris be Identified?

Since 2002 the National Aeronautics and Space Administration (NASA) has carried out an optical survey of the debris environment in the geosynchronous Earth-orbit (GEO) region with the Michigan Orbital Debris Survey Telescope (MODEST) in Chile. The survey coverage has been similar for 4 of the 5 years allowing us to follow the orbital evolution of Correlated Targets (CTs), both controlled and un-controlled objects, and Un-Correlated Targets (UCTs). Under gravitational perturbations the distributions of uncontrolled objects, both CTs and UCTs, in GEO orbits will evolve in predictable patterns, particularly evident in the inclination and right ascension of the ascending node (RAAN) distributions. There are several clusters (others have used a "cloud" nomenclature) in observed distributions that show evolution from year to year in their inclination and ascending node elements. However, when MODEST is in survey mode (field-of-view approx.1.3deg) it provides only short 5-8 minute orbital arcs which can only be fit under the assumption of a circular orbit approximation (ACO) to determine the orbital parameters. These ACO elements are useful only in a statistical sense as dedicated observing runs would be required to obtain sufficient orbital coverage to determine a set of accurate orbital elements and then to follow their evolution. Identification of the source(s) for these "clusters of UCTs" would be advantageous to the overall definition of the GEO orbital debris environment. This paper will set out to determine if the ACO elements can be used to in a statistical sense to identify the source of the "clustering of UCTs" roughly centered on an inclination of 12deg and a RAAN of 345deg. The breakup of the Titan 3C-4 transtage on February 21, 1992 has been modeled using NASA s LEGEND (LEO-to-GEO Environment Debris) code to generate a GEO debris cloud. Breakup fragments are created based on the NASA Standard Breakup Model (including fragment size, area-to-mass (A/M), and delta-V distributions). Once fragments are created, they are propagated forward in time with a subroutine GEOPROP. Perturbations included in GEOPROP are those due to solar/lunar gravity, radiation pressure, and major geopotential terms. The question to be addressed: are the UCTs detected by MODEST in this inclination/RAAN region related to the Titan 3C-4 breakup? Discussion will include the observational biases in attempting to detect a specific, uncontrolled target during given observing session. These restrictions include: (1) the length of the observing session which is 8 hours or less at any given date or declination; (2) the assumption of ACO elements for detected object when the breakup model predicts debris with non-zero eccentricities; (3) the size and illumination or brightness of the debris predicted by the model and the telescope/sky limiting magnitude.

Barker, Edwin S.↗

(abstract) Using GPS Measurements to Identify Global Ionospheric Storms in Near Real-Time

The solar wind interacts with the Earth's magnetosphere, eventually dissipating energy into the ionosphere and atmosphere. As a terminator, the ionosphere responds to magnetic storms, which is very important in understanding the energy coupling process between the Sun and the Earth and in forecasting space weather changes.The worldwide GPS network, for the first time, makes near real-time global ionospheric TEC measurements a possibility. Based on these measurements, global ionospheric TEC maps are generated with time resolution of from 5 minutes to hours. Using these maps, we can analyze the global evolution of ionospheric storms on temporal and spatial scales, which have been dificult to study before. We find that for certain types of storms (such as TID-driven), it is possible to identify them near onset and issue warning signals during the early stages. Main attention has been paid on northern hemispheric winter storms. Their common features and physical mechanisms are being investigated.

solar wind magnetospheres GPS ionosphere atmospher↗

Identifying fruitful connections between and among researchers and practitioners

Many organizations look to research to yield new and improved products and practices. Connecting practitioners who have the need for research results to the researchers producing those results is important to guiding research and utilizing its results. Likewise, connecting researchers working on related topics to one another, and connecting practitioners with related needs to one another, is important to establishing communities of shared interests. We present an approach that helps identify fruitful such connections.

requirements prioritization↗

Physics-based Tests to Identify the Accuracy of Solar Wind Ion Measurements: A Case Study with the Wind Faraday Cups

We present techniques for comparing measurements of velocity, temperature, and density with constraints imposed by the plasma physics of magnetized bi-Maxwellian ions. Deviations from these physics-based constraints are interpreted as arising from measurement errors. Two million ion spectra from the Solar Wind Experiment Faraday Cup instruments on the Wind spacecraft are used as a case study. The accuracy of velocity measurements is determined by the fact that differential flow between hydrogen and helium should be aligned with the ambient magnetic field. Modeling the breakdown of field alignment suggests velocity uncertainties are less than 0.16% in magnitude and 3deg in direction. Temperature uncertainty is found by examining the distribution of observed temperature anisotropies in high-beta solar wind intervals where the firehose, mirror, and cyclotron microinstabilities should drive the distribution to isotropy. The presence of a finite anisotropy at high beta suggests overall temperature uncertainties of 8%. Hydrogen and helium number densities are compared with the electron density inferred from observations of the local electron plasma frequency as a function of solar wind speed and year. We find that after accounting for the contribution of minor ions, the results are consistent with a systematic offset between the two instruments of 34%. The temperature and density methods are sensitive to non-Maxwellian features such as heat flux and proton beams and as a result are more suited to slow solar wind where these features are rare. These procedures are of general use in identifying the accuracy of observations from any solar wind ion instrument.

Kasper, J. C.↗

Investigation of Current Methods to Identify Helicopter Gear Health

This paper provides an overview of current vibration methods used to identify the health of helicopter transmission gears. The gears are critical to the transmission system that provides propulsion, lift and maneuvering of the helicopter. This paper reviews techniques used to process vibration data to calculate conditions indicators (CI s), guidelines used by the government aviation authorities in developing and certifying the Health and Usage Monitoring System (HUMS), condition and health indicators used in commercial HUMS, and different methods used to set thresholds to detect damage. Initial assessment of a method to set thresholds for vibration based condition indicators applied to flight and test rig data by evaluating differences in distributions between comparable transmissions are also discussed. Gear condition indicator FM4 values are compared on an OH58 helicopter during 14 maneuvers and an OH58 transmission test stand during crack propagation tests. Preliminary results show the distributions between healthy helicopter and rig data are comparable and distributions between healthy and damaged gears show significant differences.

Dempsey, Paula J.↗

Investigation of Current Methods to Identify Helicopter Gear Health

This paper provides an overview of current vibration methods used to identify the health of helicopter transmission gears. The gears are critical to the transmission system that provides propulsion, lift and maneuvering of the helicopter. This paper reviews techniques used to process vibration data to calculate conditions indicators (CI's), guidelines used by the government aviation authorities in developing and certifying the Health and Usage Monitoring System (HUMS), condition and health indicators used in commercial HUMS, and different methods used to set thresholds to detect damage. Initial assessment of a method to set thresholds for vibration based condition indicators applied to flight and test rig data by evaluating differences in distributions between comparable transmissions are also discussed. Gear condition indicator FM4 values are compared on an OH58 helicopter during 14 maneuvers and an OH58 transmission test stand during crack propagation tests. Preliminary results show the distributions between healthy helicopter and rig data are comparable and distributions between healthy and damaged gears show significant differences.

Dempsey, Paula J.↗

On Identifying the Sound Sources in a Turbulent Flow

A space-time filtering approach is used to divide an unbounded turbulent flow into its radiating and non-radiating components. The result is then used to clarify a number of issues including the possibility of identifying the sources of the sound in such flows. It is also used to investigate the efficacy of some of the more recent computational approaches.

Goldstein, M. E.↗

Method and system for sensing and identifying foreign particles in a gaseous environment

An optical method and system sense and identify a foreign particle in a gaseous environment. A light source generates light. An electrically-conductive sheet has an array of holes formed through the sheet. Each hole has a diameter that is less than one quarter of the light's wavelength. The sheet is positioned relative to the light source such that the light is incident on one face of the sheet. An optical detector is positioned adjacent the sheet's opposing face and is spaced apart therefrom such that a gaseous environment is adapted to be disposed there between. Alterations in the light pattern detected by the optical detector indicate the presence of a foreign particle in the holes or on the sheet, while a laser induced fluorescence (LIF) signature associated with the foreign particle indicates the identity of the foreign particle.

Choi, Sang H.↗

A Computational Procedure for Identifying Bilinear Representations of Nonlinear Systems Using Volterra Kernels

A computational procedure for identifying the state-space matrices corresponding to discrete bilinear representations of nonlinear systems is presented. A key feature of the method is the use of first- and second-order Volterra kernels (first- and second-order pulse responses) to characterize the system. The present method is based on an extension of a continuous-time bilinear system identification procedure given in a 1971 paper by Bruni, di Pillo, and Koch. The analytical and computational considerations that underlie the original procedure and its extension to the title problem are presented and described, pertinent numerical considerations associated with the process are discussed, and results obtained from the application of the method to a variety of nonlinear problems from the literature are presented. The results of these exploratory numerical studies are decidedly promising and provide sufficient credibility for further examination of the applicability of the method.

Kvaternik, Raymond G.↗

Identifying and Inactivating Bacterial Spores

Problems associated with, and new strategies for, inactivating resistant organisms like Bacillus canaveralius (found at Kennedy Space Center during a survey of three NASA cleanrooms) have been defined. Identifying the particular component of the spore that allows its heightened resistance can guide the development of sterilization procedures that are targeted to the specific molecules responsible for resistance, while avoiding using unduly harsh methods that jeopardize equipment. The key element of spore resistance is a multilayered protein shell that encases the spore called the spore coat. The coat of the best-studied spore-forming microbe, B. subtilis, consists of at least 45 proteins, most of which are poorly characterized. Several protective roles for the coat are well characterized including resistance to desiccation, large toxic molecules, ortho-phthalaldehyde, and ultraviolet (UV) radiation. One important long-term specific goal is an improved sterilization procedure that will enable NASA to meet planetary protection requirements without a terminal heat sterilization step. This would support the implementation of planetary protection policies for life-detection missions. Typically, hospitals and government agencies use biological indicators to ensure the quality control of sterilization processes. The spores of B. canaveralius that are more resistant to osmotic stress would serve as a better biological indicator for potential survival than those in use currently.

Newcombe, David↗

Identifying Optimal Temporal Scale for the Correlation of AOD and Ground Measurements of PM2.5 to Improve the Model Performance in a Real-time Air Quality Estimation System

Aerosol optical depth (AOD), an indirect estimate of particle matter using satellite observations, has shown great promise in improving estimates of PM 2.5 air quality surface. Currently, few studies have been conducted to explore the optimal way to apply AOD data to improve the model accuracy of PM 2.5 surface estimation in a real-time air quality system. We believe that two major aspects may be worthy of consideration in that area: 1) the approach to integrate satellite measurements with ground measurements in the pollution estimation, and 2) identification of an optimal temporal scale to calculate the correlation of AOD and ground measurements. This paper is focused on the second aspect on the identifying the optimal temporal scale to correlate AOD with PM2.5. Five following different temporal scales were chosen to evaluate their impact on the model performance: 1) within the last 3 days, 2) within the last 10 days, 3) within the last 30 days, 4) within the last 90 days, and 5) the time period with the highest correlation in a year. The model performance is evaluated for its accuracy, bias, and errors based on the following selected statistics: the Mean Bias, the Normalized Mean Bias, the Root Mean Square Error, Normalized Mean Error, and the Index of Agreement. This research shows that the model with the temporal scale of within the last 30 days displays the best model performance in this study area using 2004 and 2005 data sets.

Li, Hui↗