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At least 739 records · Page 41
All sourcesNASA NTRSDOE OSTI
DOE OSTI2016

Evidence-based evaluation of the cumulative effects of ecosystem restoration

Evaluating the cumulative effects of large-scale ecological restoration programs is necessary to inform adaptive ecosystem management and provide society with resilient and sustainable services. However, complex linkages between restorative actions and ecosystem responses make evaluations problematic. Despite long-term federal investments in restoring aquatic ecosystems, no standard evaluation method has been adopted and most programs focus on monitoring and analysis, not synthesis and evaluation. In this paper, we demonstrate a new transdisciplinary approach integrating techniques from evidence-based medicine, critical thinking, and cumulative effects assessment. Tiered hypotheses are identified using an ecosystem conceptual model. The systematic literature review at the core of evidence-based assessment becomes one of many lines of evidence assessed collectively, using critical thinking strategies and causal criteria from a cumulative effects perspective. As a demonstration, we analyzed data from 166 locations on the Columbia River and estuary representing 12 indicators of habitat and fish response to floodplain restoration actions intended to benefit threatened and endangered salmon. Synthesis of seven lines of evidence showed that hydrologic reconnection promoted macrodetritis export, prey availability, and fish access and feeding. The evidence was sufficient to infer cross-boundary, indirect, compounding and delayed cumulative effects, and suggestive of nonlinear, landscape-scale, and spatial density effects. On the basis of causal inferences regarding food web functions, we concluded that the restoration program has a cumulative beneficial effect on juvenile salmon. As a result, this evidence-based approach will enable the evaluation of restoration in complex coastal and riverine ecosystems where data have accumulated without sufficient synthesis.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Predicting responses to climate change using a joint species, spatially dependent physiologically guided abundance model

Abstract Predicting the effects of warming temperatures on the abundance and distribution of organisms under future climate scenarios often requires extrapolating species–environment correlations to climatic conditions not currently experienced by a species, which can result in unrealistic predictions. For poikilotherms, incorporating species' thermal physiology to inform extrapolations under novel thermal conditions can result in more realistic predictions. Furthermore, models that incorporate species and spatial dependencies may improve predictions by capturing correlations present in ecological data that are not accounted for by predictor variables. Here, we present a joint species, spatially dependent physiologically guided abundance (jsPGA) model for predicting multispecies responses to climate warming. The jsPGA model uses a basis function approach to capture both species and spatial dependencies. We apply the jsPGA model to predict the response of eight fish species to projected climate warming in thousands of lakes in Minnesota, USA. By the end of the century, the cold‐adapted species was predicted to have high probabilities of extirpation across its current range—with 10% of lakes currently inhabited by this species having an extirpation probability >0.90. The remaining species had varying levels of predicted changes in abundance, reflecting differences in their thermal physiology. Though the model did not identify many strong species dependencies, the variation in estimated spatial dependence across species suggested that accounting for both dependencies was important for predicting the abundance of these fishes. The jsPGA model provides a new tool for predicting changes in the abundance, distribution, and extirpation probability of poikilotherms under novel thermal conditions.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Connecting suborganismal data to bioenergetic processes: killifish embryos exposed to a dioxin-like compound

A core challenge for ecological risk assessment is to integrate molecular responses into a chain of causality to organismal or population level outcomes. Bioenergetic theory may be a useful approach for integrating suborganismal responses to predict organismal level responses that influence population dynamics. In this work, we describe a novel application of Dynamic Energy Budget (DEB), theory in the context of a toxicity framework (Adverse Outcome Pathways, AOP) to make quantitative predictions of chemical exposures to individuals, starting from suborganismal data. We use early life stage exposure of Fundulus heteroclitus to dioxin-like chemicals (DLCs) and connect AOP Key Events (KEs) to DEB processes through “damage” that is produced at a rate proportional to the internal toxicant concentration. We use transcriptomic data of fish embryos exposed to DLCs to translate molecular indicators of damage into changes in DEB parameters (damage increases somatic maintenance costs) and use DEB models to predict sublethal and lethal effects of young fish. By changing a small subset of model parameters, we predict the evolved tolerance to DLCs in some wild F. heteroclitus populations, a data set not used in model parameterization. The differences in model parameters points to reduced sensitivity and altered damage repair dynamics as contributing to this evolved resistance. Our methodology has potential extrapolation to untested chemicals of ecological concern.

63 RADIATION, THERMAL, AND OTHER ENVIRON. POLLUTAN↗
DOE OSTI2018

Marine partially protected areas: drivers of ecological effectiveness

The number of marine protected areas ( MPA s) has grown exponentially worldwide over the past decade in order to meet international targets. Most of these protected areas allow extraction of resources and are therefore designated as “partially protected areas” ( PPA s). However, the effectiveness of PPA s remains unclear due to the high variability of use types permitted. Here, we carried out what we believe to be the first global meta‐analysis of PPA s using a regulation‐based classification system for MPA s to assess their ecological effectiveness. This novel classification allows for unambiguous differentiation between areas according to allowed use, which is the key feature determining PPA performance. Highly and moderately regulated areas exhibited higher biomass and abundance of commercial fish species, whereas fish abundance and biomass in weakly regulated areas differed little from unprotected areas. Notably, the effectiveness of moderately regulated areas can be enhanced by the presence of an adjacent fully protected area. We concluded that limited and well‐regulated uses in PPA s and the presence of an adjacent fully protected area confer ecological benefits, from which socioeconomic advantages are derived.

Zupan, Mirta↗
DOE OSTI2021

Morphology and composition of Goldeye (Hiodontidae; Hiodon alosoides) otoliths

In this work, we provide up-todate morphological and compositional data on otoliths of the osteoglossomorph Goldeye (Hiodon alosoides). Using computed tomography (CT) X-ray, we documented the location of each of the three pairs of otoliths (lapilli, sagittae, and asterisci) in relation to the swim bladder, which extended forward in close proximity to the sagittae and asterisci. The lappili were the largest otoliths in terms of surface area and volume, but the sagittae were highly modified, appearing spiral in shape when viewed dorsally, with a surface area to volume ratio more than double that of the lapilli. Using scanning electron microscopy, the surface of each otolith was viewable in great detail, and small otoconia (~10.5 μm diameter) were observed on each, but were most numerous on the sagittae. Additionally, on scanning electron micrographs, the sagittae appeared to be bi-lobed, with asymmetrical lobes each oriented in the same general direction. Using neutron and X-ray diffraction methods, we found three polymorphs of calcium carbonate crystals (aragonite, vaterite, and calcite), sometimes all within the same otolith. However, in general, lapilli and sagittae were composed predominately of aragonite whereas asterisci were composed chiefly of vaterite. With these results, we provide information on a unique species, whose inclusion in future studies would benefit our understanding of fish hearing, fish evolution, and fisheries ecology.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

Presence of Fatty‐Acid Ethyl Esters in Krill Oil Dietary Supplements

Abstract Krill oil dietary supplements are increasingly used for their high concentrations of phospholipids (PL), which offer reportedly greater bioavailability of n‐3 polyunsaturated fatty acids (PUFA) than those of triacylglycerols or fatty‐acid ethyl esters (FAEE) commonly found in fish oils and fish‐oil concentrates. This work evaluated the lipid composition of 22 commercial krill oil (CKO) supplements available in the US market, and found ten products (i.e. 45%) contained significant amounts of FAEE, varying from 41% to 75%, by weight. These concentrations of FAEE differed from the minor abundances of FAEE (<3%, by weight) found in manufacturer‐supplied krill oil. The potential clinical and regulatory implications for these findings warrant further investigation.

Srigley, Cynthia T.↗
DOE OSTI2024

Stock-specific spatial overlap among seabird predators and Columbia River juvenile Chinook Salmon suggests a mechanism for predation during early marine residence

Abstract Objective Because predation is thought to be the primary source of natural mortality for juvenile salmon first entering the ocean, we sought to identify regions where, on average, stock-specific spatial overlap between the distribution of threatened and endangered juvenile Chinook Salmon Oncorhynchus tshawytscha and abundant fish-eating seabirds (common murres Uria aalge and sooty shearwaters Ardenna grisea) suggests the greatest potential for ocean predation risk to juvenile Chinook Salmon. Methods The relative abundance and spatial distribution of seabird predators and juvenile Chinook Salmon were quantified as part of long-term ecosystem surveys during May 2003–2012 and June 2003–2022. Genetic stock identification methods were used to assign individual fish to their respective stock groups. Stock-specific species distribution models then generated maps and indices of average annual spatial overlap between predators and prey within the survey area. Result There is unequivocal evidence for spatial overlap between common murres, sooty shearwaters, and five genetic groups of interior and lower Columbia River juvenile Chinook Salmon. We found strongly positive (≥0.70) spatial correlations between predator and prey densities in both May and June, although spatial overlap was, in general, greater during May. The region of highest spatial overlap occurred on the inner continental shelf between the Columbia River mouth (46.2°N) and Grays Harbor (47.0°N), a region at the beginning of the juvenile salmon migratory pathway that is strongly affected by freshwater outflow from the river. Conclusion Our findings support the idea that ocean avian predation during early marine residence has the potential to affect marine survival of juvenile Chinook Salmon and should be further investigated to better inform and implement ecological models and possible recovery actions for Chinook Salmon populations of the Columbia River basin.

Zamon, Jeannette E.↗
DOE OSTI2022

Efficacy of a Short-Term Captive Broodstock Program Compared with Hatchery-Origin Spring Chinook Salmon Derived from the Same Population

Abstract We examined the efficacy of a one-generation (five brood years: 1997–2001) captive broodstock program for spring Chinook Salmon Oncorhynchus tshawytscha by comparing survival rates of captive broodstock progeny (CBP; F2) with that of hatchery-origin fish (HOR) from a conservation hatchery supplementation program in which both groups were derived from the Tucannon River (Washington State) population for the 2000–2006 brood years. Survival rates compared were egg to fry, fry to smolt, egg to smolt, total (ages 3–5) and adult (ages 4+) smolt-to-adult-return (SAR) survival, and total (ages 3–5) and adult (ages 4+) progeny-to-parent (P:P) ratio. Total escapement and adult P:P ratios were also examined to determine if observed demographic benefits to the population continued after the captive broodstock program ended. The CBP group had lower within-hatchery survival than the HOR group, with significant differences in survival at the egg-to-fry and egg-to-smolt stages due to poor egg viability. Mean untransformed total and adult SARs for the CBP were half those of the HOR group; however, SARs did not differ significantly. The CBP also had significantly lower total and adult P:P ratios than the HOR group and were below replacement for six of the seven brood years. While the captive broodstock provided additional fish for release that would not have been available otherwise, overall the CBP performed poorly and below expectations compared with the HOR group, both within the hatchery and after release. The captive broodstock program provided a short-term demographic boost, most notable in the 2008–2010 return years, but the benefit did not carry over after the program ended.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2017

Amphibian Response to Rotenone Treatment of Ten Alpine Lakes in Northwest Montana

Abstract The piscicide rotenone is an important and widely used management tool for native fish conservation; however, long-term empirical field studies investigating potential effects on nontarget species are lacking. We tested for effects of rotenone on four native amphibian species inhabiting 10 fish-bearing alpine lakes in northwest Montana. Visual encounter amphibian surveys were conducted for 2–4 years to establish baseline species-specific detection frequencies prior to piscicide treatment to eradicate nonnative trout. Species diversity and detection frequencies varied considerably among lakes, presumably due to differences in the amount of emergent vegetation. Comparisons between baseline detection frequencies and those established from posttreatment surveys consistently revealed no significant changes in amphibian detection frequency, suggesting resiliency of amphibian populations to these piscicide treatments. These results may be explained by one or more of the following: (1) timing the rotenone application when many amphibians had metamorphosed beyond the gill-breathing life stage; (2) application of rotenone at a concentration that was sublethal to amphibians; and (3) posttreatment immigration of adults from habitats not treated with rotenone. This study provides insight into the factors that contribute to amphibian population resiliency to alpine lake rotenone treatments within the context of a watershed-scale native trout restoration program.

Fried, Lynda M.↗
DOE OSTI2017

Entrainment of Juvenile and Adult American Shad at a Pumped Storage Facility

The American Shad Alosa sapidissima has been targeted for restoration to the upper Susquehanna River, and entrainment losses at hydroelectric facilities on the river, including the Muddy Run Pumped Storage Facility, are of concern for the potential growth of the American Shad population. Based on the integration of pumping volume, time of entrainment, and literature–reported diel emigration of juvenile American Shad, the entrainment rate (N = 145; 53 exposed to pumping) was estimated at 3.5%. The entrainment rate for adults (N = 507) was estimated at 0.3–3.9%. Using multistate mark–recapture models, the estimated entrainment probabilities (Ψ) of radio–tagged juveniles were higher during periods of extended pumping (>1 h; Ψ = 0.093; 95% confidence interval [CI] = 0.054–0.156) than at periods of no pumping or short–duration pumping (<1 h; Ψ < 0.0001; 95% CI = 0.0–0.001); the high extended pumping occurred between 2300 and 0600 hours. Entrainment probabilities for adults were low (Ψ < 0.02); the highest probability occurred for fish detected downstream of the intake during the peak portion of the run (Ψ = 0.015; 95% CI = 0.004–0.047). Entrainment probability for most adult fish did not differ from zero. The low values of Ψ for both life stages were attributed to (1) the deep location of the intake (intake ceiling >11.7 m below the water surface), (2) the surface orientation of American Shad (upper 3.1 m), (3) the low overlap between high–volume pumping and peak emigration/migration times, (4) the pumping volume relative to prevailing river flows, and (5) the prolonged, robust swimming speed of American Shad, particularly that of adults (>2.2 m/s), which exceeded the intake velocity (0.2–0.9 m/s). Entrainment of juveniles increased with co–occurrence of low incoming river flows, high pumping volume, and peak emigration times. Furthermore, quantification of migratory species’ entrainment at pumped storage facilities requires integration of diel migration/emigration times with the frequency, timing, and duration of pumping volume.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2018

Juvenile Salmonid Assemblages at the Mirror Lake Complex in the Lower Columbia River before and after a Culvert Modification

Abstract This study examined salmonid assemblages upstream of a culvert connecting the Mirror Lake Complex with the lower Columbia River before and after the culvert was modified to improve habitat connectivity and fish passage. Initially the culvert limited water flow between the Columbia River and the Mirror Lake Complex. The outlet and interior of the culvert were reconfigured to create a more “natural” and suitable passageway for salmonids through the removal of riprap and the strategic placement of boulders, cobbles, gravels, baffles, and weirs. Prior to the culvert modification, three sites were sampled monthly between April and August of 2008, 5.0 and 0.5 km upstream of the culvert and immediately downstream of the culvert. After the culvert modification, the same sites were sampled from 2009 to 2012, with two additional sites added in 2010. Sites near the culvert supported Chinook Salmon Oncorhynchus tshawytscha, Coho Salmon O. kisutch, and Chum Salmon O. keta, while sites further from the culvert supported unmarked Coho Salmon and Rainbow Trout O. mykiss, steelhead (anadromous Rainbow Trout), and Cutthroat Trout O. clarkii. Clear trends in salmonid occurrence were not observed, although densities of Chinook Salmon tended to be higher in years postmodification than before modification. Culvert modifications should focus on alleviating site-specific fish passage conditions to result in substantial changes to habitat connectivity.

Sol, Sean Y.↗
DOE OSTI2022

Size and Distribution of Parr Produced from Natural‐ and Hatchery‐Origin Steelhead Spawning Naturally in a Small Pacific Northwest Coastal Stream

Abstract Recent studies suggest that steelhead Oncorhynchus mykiss produced from local hatchery‐origin (HOR) adults have lower lifetime fitness than their natural‐origin (NOR) counterparts. To increase our understanding of this pattern, we compared age‐1 parr size and distribution produced by a local integrated population of HOR and NOR adults spawning naturally across a range of environmental conditions. Across 8 years, we used genetic parentage assignments and field measurements of parr in conjunction with creek temperature and flow data to find small, nonbiologically significant differences in size between parr of different parent origins. This suggests that parr produced by HOR adults are acquiring enough resources to grow at a rate similar to that of parr produced by NOR adults. In contrast to origin, we found strong positive associations between mean size of parr and annual mean water temperature and summer flow. Additionally, the distribution of parr was similar and HOR‐produced parr were not skewed relative to the location of the hatchery. Parr occupying the full extent of accessible and suitable habitat might be a positive outcome for hatchery programs seeking to supplement an existing population or replace an extirpated population. However, these results also imply that HOR fish could be competing with NOR fish for food and space, which might be less desirable if the goal of the hatchery program is harvest and not supplementation. Our results highlight the importance of clearly articulated goals for the hatchery program, as the observed pattern could be deemed a benefit or a risk depending on the hatchery's purpose. Lastly, projections for higher water temperatures and reduced summer flows, when considered in the context of the correlations we observed for size of parr, imply that coastal steelhead populations could start experiencing negative climate impacts with respect to steelhead parr growth metrics during the summer in the next few decades.

Kennedy, Benjamen M.↗
DOE OSTI2024

Population assignment of migratory Westslope Cutthroat Trout (WCT) in the Clark Fork–Pend Oreille River basin

Abstract Objective The Clark Fork–Pend Oreille River basin of northeastern Washington and the Idaho Panhandle historically supported a robust metapopulation of the Westslope Cutthroat Trout (WCT) Oncorhynchus lewisi, a western native salmonid of high cultural and economic value. The construction of impassible hydroelectric dams and smaller instream barriers has prevented the return of migratory WCT to spawning tributaries, leading to the fragmentation of this metapopulation over the past 100 years. One such impassible barrier is Albeni Falls Dam (AFD) near Newport, Washington, which was completed without fish passage capabilities in 1955. We sought to examine large-scale genetic patterns in the study area and determine the most likely spawning tributary of origin for migratory WCT captured below AFD. Methods We created a genetic baseline representative of populations within the Clark Fork–Pend Oreille River basin from upstream and downstream of the dam using 191 biallelic single-nucleotide polymorphism genetic markers. Our data set included 124 collections, which allowed for an examination of population structure and hatchery influence across the study area and provided a robust tool for population assignment. Population assignment tests were conducted using the program RUBIAS. Result Population assignment tests were successful for all pure WCT of unknown origin despite potential influence from hatchery lineages across the study area. Of 83 migratory WCT captured below AFD, approximately 80% were assigned to tributaries upstream of AFD with a posterior assignment probability of at least 90%. Only one fish was assigned to a tributary downstream of AFD. Conclusion Our results indicate that AFD disrupts the natural metapopulation dynamics of WCT populations in the basin. Passage for WCT at this barrier would reestablish metapopulation connectivity within the basin by allowing migratory individuals to make genetic contributions to populations upstream of the dam.

Wells, Craig D. (ORCID:0000000258513250)↗
DOE OSTI2019

Influence of lure choice and survey duration on scent stations for carnivore surveys

Abstract Noninvasive, camera‐based, scent station surveys have become a common approach to estimate population parameters for mammalian carnivores. Many carnivores are particularly sensitive to olfactory cues; and, as such, the quality and quantity of odor attractant used during surveys can significantly affect the accuracy and precision of the survey. Additionally, survey length is also an important consideration because many mammalian predators are highly mobile and elusive in nature. Using scent station surveys in autumn 2013 and 2014 on the Savannah River Site, Aiken, South Carolina, USA, we tested the effects of 5 lures: fatty acid, fish oil, synthetic fermented egg, beaver castor, and skunk essence on visitation rates, visitation probability, and latency to visitation of multiple predator species. We also estimated occupancy probability for 2 carnivore species using different survey lengths to determine the effect of survey period on the precision of occupancy estimates. We found that skunk essence had greater visitation probability and visits than other lures evaluated. Species‐specific bait‐preference models revealed that raccoons ( Procyon lotor ) were more likely to visit skunk essence, and coyotes ( Canis latrans ) were less likely to visit fish oil as compared with fatty acid. Latency to visitation ranged from 104.7 to 112.1 hours and did not vary among scents. Longer survey durations resulted in more precise estimates of occupancy and detection probability. Our results suggest a wide range of scents commonly used for carnivore capture may perform as well as, or better than, fatty acid for noninvasive carnivore surveys. Further, study designs should carefully consider the duration of scent‐station surveys depending on the level of precision desired in estimates of occupancy and detection probability. © 2019 The Wildlife Society.

Webster, Sarah C.↗
DOE OSTI2019

Research Progress of Mercury Bioaccumulation in the Aquatic Food Chain, China: A Review

Research on mercury (Hg) in aquatic ecosystems in China has focused mainly on fish, with little research on the base of the food chain and Hg bioaccumulation mechanisms. This paper summarizes research progress pertaining to the characteristics, current status, and trends of Hg accumulation in the aquatic food chain in China, analyzes the effects of human activities on the transmission and accumulation of Hg in aquatic food chains, and assesses their risks to human and ecosystem health. A comparison of fish samples in China between 2000 and 2018 indicates that their total Hg content remains at relatively safe levels. However, because current information is generally insufficient to confirm how anthropogenic activities affect transformation and bioaccumulation in the aqueous environment, Hg isotope studies should be a focus of research on aquatic food webs. Additionally, more attention should be paid to Hg transport and bioaccumulation in the basic food chain by focusing on multi-contaminant joint exposure studies and establishing Hg bio-transport models.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Coral loss alters guarding and farming behavior of a Caribbean damselfish

Coral loss is a major element of global ecological change in the oceans that may shape the behavior of keystone species such as habitat-attached animals. Farming damselfishes cultivate and aggressively protect algal garden within their territory, thereby shaping local fish assemblages and macro-algae diversity. Following the widespread loss of live branching coral throughout Florida and the Caribbean Sea, dusky damselfish (Stegastes adustus) have modified their territorial behavior. We compared antagonistic behavior, and size and algal species composition of territories of dusky damselfish on dead branching coral rubble and live boulder coral in the Dry Tortugas National Park, USA. Even though similar numbers of “intruders” entered each habitat type, dusky damselfish on rubble territories chased out significantly more fishes, had larger territories and more species of algae were present in their gardens. This study shows that dusky damselfish successfully occupy living and dead coral areas; however, there are potential trade-offs between defending a larger territory and cultivating fewer algal species.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Assessment of potential impact of magnetic fields from a subsea high-voltage DC power cable on migrating green sturgeon, Acipenser medirostris

Abstract Empirical evidence suggests that marine animals perceive and orient to local distortions in the earth’s natural magnetic field. Magnetic fields (MFs) generated by electrified underwater cables may produce similar local distortions in the earth’s main field. Concern exists that these distortions may impact migration movements of MF-sensitive animals. The Trans Bay Cable (TBC) is a ± 200-kV, 400-megawatt, 85-km high-voltage direct current transmission line buried through San Francisco Bay (37° 56′ 8.81″ N, 122° 27′ 0.19″ W). Detections of adult green sturgeon implanted with acoustic transmitters were used from six cross-bay receiver arrays from 2006 to 2015 to investigate how inbound and outbound migration movements through lower portions of their route to/from upstream breeding grounds are related to the TBC’s energization status (off/on) and other local environmental variables. Here, we assess how these variables impacted transit success, misdirection from the migration route, transit times, and migration path locations within stretches between the Bay’s mouth and the start of the Sacramento River. Overall, there was varied evidence for any effect on migration behavior associated with cable status (off/on). A higher percentage of inbound fish successfully transited after the cable was energized, but this effect was nonsignificant in models including temperature. Outbound fish took longer to transit after cable energization. Inbound and outbound migration path locations were not significantly influenced by cable energization, but results suggest a potential subtle relationship between energization and both inbound and outbound paths. Overall, additional migration-based studies are needed to investigate the impact of anthropogenic cables on marine species.

Wyman, Megan T. (ORCID:0000000256844603)↗