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At least 739 records · Page 41

AURORA: Automated Refinement of Coarse-Grained Reconfigurable Accelerators

Coarse-grained reconfigurable arrays (CGRAs), loosely defined as arrays of functional units interconnected through a network-on-chip (NoC), provide higher flexibility than domain-specific ASIC accelerators while offering increased hardware efficiency with respect to fine-grained reconfigurable devices, such as Field Programmable Gate Arrays (FPGAs). Un-fortunately, designing a CGRA for a specific application domain involves enormous software/hardware engineering effort (e.g., designing the CGRA, map operations onto the CGRA, etc) and requires the exploration on a large design space (e.g., applying appropriate loop transformation on each application, specializing the reconfigurable processing elements of the CGRA, refining the network topology, deciding the size of the data memory, etc). Int his paper, we propose AURORA – a software/hardware co-design framework to automatically synthesize optimal CGRA given a set of applications of interest

Tan, Cheng↗

Quantitative Mapping of Nanoscale Chemical Dynamics in Sub-sampled Operando (S)TEM Images Using Spatio-Temporal Analytics

One of the main limitations in the use of operando scanning transmission electron microscopes to study dynamic chemical processes is the effect of the electron beam on the kinetics of the reaction being observed. Here we demonstrate that a flexible Gaussian mixture model can be used to extract quantitative information directly from sub-sampled images, i.e.~images where not all the pixels in the image are illuminated with the beam. The use of this method is demonstrated for the charge/discharge cycle of a Li-battery, where the deposition and dissolution of Li at the anode can be accurately quantified for sub-sampling levels down to 1%. Performing operando imaging using a small fraction of the pixels means that the observations can significantly reduce the effect of the beam, automatically increase the imaging speed and decrease the total data transfer rate required. Such new software capabilities offer the potential to significantly widen the application of operando hardware approaches to study nanoscale dynamics in materials.

Stanfill, Bryan A.↗

Multi-static Serial LiDAR for Surveillance and Identification of Marine Life at MHK Installations

Final Report for project DE-EE0006787: Multi-static Serial LiDAR for Surveillance and Identification of Marine Life at MHK Installations. This project developed and tested an optical monitoring system prototype that will be suitable for marine and hydrokinetic (MHK) full project lifecycle observation (baseline, commissioning, and decommissioning), with automated real-time classification of marine animals. This system can be deployed to collect pre-installation baseline species observations at a proposed deployment site with minimal post-processing overhead. To satisfy deployed MHK project species of concern (e.g. Endangered Species Act-listed) monitoring requirements, the system provides automated tracking and notification of the presence of managed animals within established perimeters of MHK equipment and provides high resolution imagery of their behavior through a wide range of conditions. During a project’s decommissioning stage, the system can remain installed to provide resource managers with post-installation data. Our technology, known as an Unobtrusive Multi-static Serial LiDAR Imager (UMSLI), is a technology transfer of underwater distributed LiDAR imaging technology that preserves the advantages of traditional optical and acoustic solutions while overcoming associated disadvantages for MHK environmental monitoring applications. This new approach is a purposefully-designed, reconfigurable adaptation of an existing technology that can be easily mounted on or around different classes of MHK equipment. The system uses low average power red (638nm) laser illumination to be invisible and eye-safe to marine animals and is compact and cost effective. The equipment is designed for long term, maintenance-free operations, to inherently generate a sparse primary dataset that only includes detected anomalies (animal presence information), and to allow robust real-time automated animal classification/identification with a low data bandwidth requirement. Advantages of the technology over others currently being used or being considered for MHK monitoring include: Unlike a conventional camera, the depth of field is near-infinite and limited by attenuation (approximately 5-8 m) rather than focal properties of a lens; Operation in an adaptive mode which can project a sparse grid of pulses with higher peak power for longer range detection (>10 meters) and track animals within a zone of interest with high resolution imagery for identification of marine life at closer range (<5m); System detection limit and Signal-to-Noise-Ratio is superior to a camera, due to rejection of both backscattering component and ambient solar background; Multiple wide-angle pulsed laser illuminators and bucket detectors can be flexibly configured to cover a 4pi steradian (i.e. omnidirectional) scene volume, while also retrieving 3D features of animal targets from timing information; Process and classification framework centered around a novel active learning and incremental classification classifier that enables accurate identification of a variety of marine animals automatically; A two-tiered monitoring architecture and invisible watermarking-based data archiving and retrieving approach ensures significant data reduction while preserving high fidelity monitoring. A methodology to train and optimize the classifier for target species of concern to optimize site monitoring effectiveness. This technological innovation addresses a high priority regulatory requirement to observe marine life interaction near MHK projects. Our solution improves resource manager confidence that any interactions between marine animals and equipment are observed in a cost-effective and automated manner. Without EERE funding, this novel application of multi-static LiDAR would not have been available to the MHK community for environmental monitoring.

16 TIDAL AND WAVE POWER↗

Interactive Computer Graphics

Aerospace data analysis tools that significantly reduce the time and effort needed to analyze large-scale computational fluid dynamics simulations have emerged this year. The current approach for most postprocessing and visualization work is to explore the 3D flow simulations with one of a dozen or so interactive tools. While effective for analyzing small data sets, this approach becomes extremely time consuming when working with data sets larger than one gigabyte. An active area of research this year has been the development of data mining tools that automatically search through gigabyte data sets and extract the salient features with little or no human intervention. With these so-called feature extraction tools, engineers are spared the tedious task of manually exploring huge amounts of data to find the important flow phenomena. The software tools identify features such as vortex cores, shocks, separation and attachment lines, recirculation bubbles, and boundary layers. Some of these features can be extracted in a few seconds; others take minutes to hours on extremely large data sets. The analysis can be performed off-line in a batch process, either during or following the supercomputer simulations. These computations have to be performed only once, because the feature extraction programs search the entire data set and find every occurrence of the phenomena being sought. Because the important questions about the data are being answered automatically, interactivity is less critical than it is with traditional approaches.

Kenwright, David↗

3DBFSVBF (3D BatFinder Smart Video BioFilter and Multi-class BatFinder Smart Video BioFilter) [SWR-22-88]

Bats are notoriously difficult to study, therefore, identifying specific behavioral trends and the precise environmental conditions at the time of collision requires a monitoring solution that can reliably collect relevant data. To date, thermal infrared video surveillance has been extensively applied to study bats and has proven to be a powerful yet cumbersome tool. Current analytical approaches are time consuming because data processing data has not been fully automated. In the past, steps have been taken to record avian and bat activity in conjunction with complicated image processing techniques that separate species from other moving objects within the field of view (i.e. clouds and portions of the wind turbine). Once the videos are collected, the post-processing does not allow real time monitoring and identification, leading to a delay in both studying the behavior of these species and determining the effectiveness of any impact reduction strategy being studied. Moreover, object identification capability is lacking, thus limiting the usefulness of video data. To resolve these issues, we are using open source 3D computer vision and machine learning techniques allowing for automatic detection of objects in real-time with the ability to correlate these objects with environmental variables and recording the flight paths of each object. The machine learning has been trained on 3D data and allows for automated real-time data collection, identification and tracking, thereby eliminating the need for long and tedious post-analysis processing of the videos. This machine learning model is an added feature to the previous BatFinder Smart Video BioFilter and increases the accuracy of that systems classification by increasing the accuracy of identifying bats (90% accuracy) and insects (69% accuracy) to a 97% accuracy. There are two object classifier machine learning models, Binary and multi-classification. Binary object classifier labeled BatFinder_Smart_Video_BioFilter.h5 distinguishes between biological objects and non-biological objects. The main goal of this object classifier is to ignore the turbine blades while detecting biological object flying withing the rotor swept area of the turbine. Non-biological objects have a probability of 0 and biological objects have a probability of 1. Multi-classifier labeled Multiclass_BatFinder_Smart_Video_BioFilter.h5 distinguishes between bats, birds, insects and non-biological.

Yarbrough, John↗

Low cost automated precise time measurement system

The Aerospace Guidance and Metrology Center (AGMC) has the responsibility for the dissemination of Precise Time and Time Interval (PTTI) to Air Force timing systems requiring microsecond time. In order to maintain traceability to the USNO Master Clock in Washington D.C., and accomplish efficient logging of time and frequency data on individual precision clocks, a simple automatic means of acquiring precise time has been devised. The Automatic Time Interval Measurement System (ATIMS) consists of a minicomputer (8K Memory), teletype terminal, electronic counter, Loran C receiver, time base generator and locally-manufactured relay matrix panel. During the measurement process, the computer controls the relay matrix which selects for comparison 13 atomic clocks against a reference clock and the reference versus Loran C. Through use of the system teletype, the operator is able to set the system clock (hours, minutes and seconds), examine and/or modify all clock data and constants, and set measurement intervals. This is done in a conversational manner. A logic flow diagram, system schematic, source listing and software components are included in the presentation.

Alpert, A.↗

A new MR-SAD algorithm for the automatic building of protein models from low-resolution X-ray data and a poor starting model

Determining macromolecular structures from X-ray data with resolution worse than 3Å remains a challenge. Even if a related starting model is available, its incompleteness or its bias together with a low observation-to-parameter ratio can render the process unsuccessful or very time-consuming. Yet, many biologically important macromolecules, especially large macromolecular assemblies, membrane proteins and receptors, tend to provide crystals that diffract to low resolution. A new algorithm to tackle this problem is presented that uses a multivariate function to simultaneously exploit information from both an initial partial model and low-resolution single-wavelength anomalous diffraction data. The new approach has been used for six challenging structure determinations, including the crystal structures of membrane proteins and macromolecular complexes that have evaded experts using other methods, and large structures from a 3.0 Å resolution F1-ATPase data set an a 4.5Å resolution SecYEG–SecA complex data set. All of the models were automatically built by the method to Rfree values of between 28.9 and 39.9% and were free from the initial model bias.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

SolarAPP+ Performance Review (2023 Data)

The Solar Automated Permit Processing Plus (SolarAPP+) platform is an online portal to facilitate and expedite rooftop solar photovoltaic (PV) and battery storage permitting processes. SolarAPP+ allows PV contractors to upload system specifications, have that information automatically reviewed for code compliance, and receive instant approval for code-compliant systems, reducing authority having jurisdiction (AHJ) staff time needed for review. SolarAPP+ also provides inspection checklists to verify installation practices and adherence to approved designs. SolarAPP+ is available to AHJs at no cost. This report is part of an ongoing series of reviews of SolarAPP+ performance. Consistent with previous performance reviews, we summarize SolarAPP+ adoption trends to date and compare various metrics for PV systems permitted through SolarAPP+ versus systems permitted through traditional AHJ permitting processes. As of the end of 2023, the National Renewable Energy Laboratory (NREL) had contacted over 1,700 AHJs with significant solar permitting volume regarding SolarAPP+. Of those, 793 AHJs had expressed interest in the platform as of the end of 2023. 161 AHJs had begun piloting the platform and 97 of these had publicly launched the platform by the end of 2023. In 2023, 668 installers submitted 18,906 permits through the SolarAPP+ platform, including 4,834 permits submitted as part of a solar plus storage program. SolarAPP+ permits accounted for around 43% of all permits issued in participating AHJs. We compare permitting timelines through SolarAPP+ to traditional AHJ permitting processes to assess the platform's performance. Consistent with previous SolarAPP+ performance reviews, we find that permitting timelines are significantly shorter for SolarAPP+ projects. Based on median timelines, a typical SolarAPP+ project is permitted and inspected 14.5 business days sooner than traditional projects. We estimate that automatic SolarAPP+ permitting saved around 7,200 hours of AHJ staff time in 2023. Finally, we estimate that SolarAPP+ eliminated over 150,000 business days in permitting-related delays in 2023.

14 SOLAR ENERGY↗

SolarAPP+ Performance Review (2024 Data)

The Solar Automated Permit Processing Plus (SolarAPP+) platform is an online portal to facilitate and expedite rooftop solar photovoltaic (PV) and battery storage permitting processes. SolarAPP+ allows PV contractors to upload system specifications, have that information automatically reviewed for code compliance, and receive instant approval for code-compliant systems, reducing authority having jurisdiction (AHJ) staff time needed for review. SolarAPP+ also provides inspection checklists to verify installation practices and adherence to approved designs. This report is part of an ongoing series of reviews of SolarAPP+ performance. Consistent with previous performance reviews, we summarize SolarAPP+ adoption trends to date and compare various metrics for PV systems permitted through SolarAPP+ versus systems permitted through traditional AHJ permitting processes. As of the end of 2024, 799 AHJs had expressed interest in the platform, with 264 fully adopting (215) or piloting (49) the platform. In 2024, 861 installers submitted 37,393 permits through the SolarAPP+ platform, including 27,375 permits for PV+storage systems. SolarAPP+ permits accounted for around 43% of all permits issued in all participating AHJs, and more than 60% of all permits in several participating AHJs. We compare permitting timelines through SolarAPP+ to traditional AHJ permitting processes to assess the platform's performance. Consistent with previous SolarAPP+ performance reviews, we find that permitting timelines are significantly shorter for SolarAPP+ projects. Based on median timelines, a typical SolarAPP+ project is permitted and inspected 12 business days sooner than traditional projects. We estimate that automatic SolarAPP+ permitting saved around 18,400 hours of AHJ staff time in 2024. Finally, we estimate that SolarAPP+ eliminated over 100,000 business days in permitting-related delays in 2024.

14 SOLAR ENERGY↗

Aquarius's Instrument Science Data System (ISDS) Automated to Acquire, Process, Trend Data and Produce Radiometric System Assessment Reports

The Aquarius Radiometer, a subsystem of the Aquarius Instrument required a data acquisition ground system to support calibration and radiometer performance assessment. To support calibration and compose performance assessments, we developed an automated system which uploaded raw data to a ftp server and saved raw and processed data to a database. This paper details the overall functionalities of the Aquarius Instrument Science Data System (ISDS) and the individual electrical ground support equipment (EGSE) which produced data files that were infused into the ISDS. Real time EGSEs include an ICDS Simulator, Calibration GSE, Labview controlled power supply, and a chamber data acquisition system. ICDS Simulator serves as a test conductor primary workstation, collecting radiometer housekeeping (HK) and science data and passing commands and HK telemetry collection request to the radiometer. Calibration GSE (Radiometer Active Test Source) provides source choice from multiple targets for the radiometer external calibration. Power Supply GSE, controlled by labview, provides real time voltage and current monitoring of the radiometer. And finally the chamber data acquisition system produces data reflecting chamber vacuum pressure, thermistor temperatures, AVG and watts. Each GSE system produce text based data files every two to six minutes and automatically copies the data files to the Central Archiver PC. The Archiver PC stores the data files, schedules automated uploads of these files to an external FTP server, and accepts request to copy all data files to the ISDS for offline data processing and analysis. Aquarius Radiometer ISDS contains PHP and MATLab programs to parse, process and save all data to a MySQL database. Analysis tools (MATLab programs) in the ISDS system are capable of displaying radiometer science, telemetry and auxiliary data in near real time as well as performing data analysis and producing automated performance assessment reports of the Aquarius Radiometer.

Source record↗

Rapid Automated Annotation and Analysis of N-Glycan Mass Spectrometry Imaging Data Sets Using NGlycDB in METASPACE

Imaging N-glycan spatial distribution in tissues using mass spectrometry imaging (MSI) is emerging as a promising tool in biological and clinical applications. However, there is currently no high throughput tool for visualization and molecular annotation of N-glycans in MSI data, which significantly slows down data processing and hampers the applicability of this approach. In this work, we present how METASPACE, an open-source cloud engine for molecular annotation of MSI data, can be used to automatically annotate, visualize, analyze, and interpret high-resolution mass spectrometry-based spatial N-glycomics data. METASPACE is an emerging tool in spatial metabolomics, but the lack of compatible glycan databases has limited its application for comprehensive N-glycan annotations from MSI datasets. We created NGlycDB, a public database of N-glycans, by adapting available glycan databases. We demonstrate the applicability of NGlycDB in METASPACE by analyzing MALDI-MSI data from formalin-fixed paraffin-embedded (FFPE) human kidney and mouse lung tissue sections. We added NGlycDB to METASPACE for public use, thus facilitating applications of MSI in glycobiology.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

On the Impact of Widening Vector Registers on Sequence Alignment

Vector extensions, such as SSE, have been part of the x86 since the 1990s, with applications in graphics, signal processing, and scientific applications. Although many algorithms and applications can naturally benefit from automatic vectorization techniques, there are still many that are difficult to vectorize due to their dependence on irregular data structures, dense branch operations, or data dependencies. Sequence alignment, one of the most widely used operations in bioinformatics workflows, has a computational footprint that features complex data dependencies. In this paper, we demonstrate that the trend of widening vector registers adversely affects the state-of-the-art sequence alignment algorithm based on striped data layouts. We present a practically efficient SIMD implementation of a parallel scan based sequence alignment algorithm that can better exploit wider SIMD units. We conduct comprehensive workload and use case analyses to characterize the relative behavior of the striped and scan approaches and identify the best choice of algorithm based on input length and SIMD width.

Needleman-Wunsch↗

Pairwise Sequence Alignment Library

Vector extensions, such as SSE, have been part of the x86 CPU since the 1990s, with applications in graphics, signal processing, and scientific applications. Although many algorithms and applications can naturally benefit from automatic vectorization techniques, there are still many that are difficult to vectorize due to their dependence on irregular data structures, dense branch operations, or data dependencies. Sequence alignment, one of the most widely used operations in bioinformatics workflows, has a computational footprint that features complex data dependencies. The trend of widening vector registers adversely affects the state-of-the-art sequence alignment algorithm based on striped data layouts. Therefore, a novel SIMD implementation of a parallel scan-based sequence alignment algorithm that can better exploit wider SIMD units was implemented as part of the Parallel Sequence Alignment Library (parasail). Parasail features: Reference implementations of all known vectorized sequence alignment approaches. Implementations of Smith Waterman (SW), semi-global (SG), and Needleman Wunsch (NW) sequence alignment algorithms. Implementations across all modern CPU instruction sets including AVX2 and KNC. Language interfaces for C/C++ and Python.

Jeff Daily, PNNL↗

The processing and transmission of EEG data

Interest in sleep research was stimulated by the discovery of a number of physiological changes that occur during sleep and by the observed effects of sleep on physical and mental performance and status. The use of the relatively new methods of EEG measurement, transmission, and automatic scoring makes sleep analysis and categorization feasible. Sleep research involving the use of the EEG as a fundamental input has the potential of answering many unanswered questions involving physical and mental behavior, drug effects, circadian rhythm, and anesthesia.

Schulze, A. E.↗

Flight evaluation of advanced navigation techniques for general aviation using frequency scanning

Experiments on an automatic multisensor navigation concept are being conducted in a Cessna 402B. The test system consists of VOR, DME, and air data sensors controlled by a Hewlett Packard 9820A electronic calculator which processes the data and, by means of a four-state Kalman filter, outputs position and ground and wind velocities to a map display. Novel features which make such a system potentially low-cost include frequency-scanning operation of a single VOR receiver and a single DME transceiver and use of a shed-vortex true airspeed sensor. Results obtained during flight in a local area where six to eight DME NAVAIDS were receivable yielded better than 1/4-mile accuracy.

Jackson, C. T., Jr.↗

Preliminary flight-determined subsonic lift and drag characteristics of the X-29A forward-swept-wing airplane

The X-29A subsonic lift and drag characteristics determined, met, or exceeded predictions, particularly with respect to the drag polar shapes. Induced drag levels were as great as 20 percent less than wind tunnel estimates, particularly at coefficients of lift above 0.8. Drag polar shape comparisons with other modern fighter aircraft showed the X-29A to have a better overall aircraft aerodynamic Oswald efficiency factor for the same aspect ratio. Two significant problems arose in the data reduction and analysis process. These included uncertainties in angle of attack upwash calibration and effects of maneuver dynamics on drag levels. The latter problem resulted from significantly improper control surface automatic camber control scheduling. Supersonic drag polar results were not obtained during this phase because of a lack of engine instrumentation to measure afterburner fuel flow.

Hicks, John W.↗

Investigation of a Technique for Measuring Dynamic Ground Effect in a Subsonic Wind Tunnel

To better understand the ground effect encountered by slender wing supersonic transport aircraft, a test was conducted at NASA Langley Research Center's 14 x 22 foot Subsonic Wind Tunnel in October, 1997. Emphasis was placed on improving the accuracy of the ground effect data by using a "dynamic" technique in which the model's vertical motion was varied automatically during wind-on testing. This report describes and evaluates different aspects of the dynamic method utilized for obtaining ground effect data in this test. The method for acquiring and processing time data from a dynamic ground effect wind tunnel test is outlined with details of the overall data acquisition system and software used for the data analysis. The removal of inertial loads due to sting motion and the support dynamics in the balance force and moment data measurements of the aerodynamic forces on the model is described. An evaluation of the results identifies problem areas providing recommendations for future experiments. Test results are validated by comparing test data for an elliptical wing planform with an Elliptical wing planform section with a NACA 0012 airfoil to results found in current literature. Major aerodynamic forces acting on the model in terms of lift curves for determining ground effect are presented. Comparisons of flight and wind tunnel data for the TU-144 are presented.

Graves, Sharon S.↗

Intelligent Text Retrieval and Knowledge Acquisition from Texts for NASA Applications: Preprocessing Issues

In this contract, which is a component of a larger contract that we plan to submit in the coming months, we plan to study the preprocessing issues which arise in applying natural language processing techniques to NASA-KSC problem reports. The goals of this work will be to deal with the issues of: a) automatically obtaining the problem reports from NASA-KSC data bases, b) the format of these reports and c) the conversion of these reports to a format that will be adequate for our natural language software. At the end of this contract, we expect that these problems will be solved and that we will be ready to apply our natural language software to a text database of over 1000 KSC problem reports.

Source record↗