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Plasma diagnostics package. Volume 1: OSS-1 section

This volume (1) of the Plasma Diagnostics Package (PDP) final science report contains a summary of all of the data reduction and scientific analyses which were performed using PDP data obtained on STS-3 as a part of the Office of Space Science first payload (OSS-1). This work was performed during the period of launch, March 22, l982, through June 30, l983. During this period the primary data reduction effort consisted of processing summary plots of the data received by the 14 instruments located on the PDP and submitting these data to the National Space Science Data Center (NSSDC). The scientific analyses during the performance period consisted of general studies which incorporated the results of several of the PDP's instruments, detailed studies which concentrated on data from only one or two of the instruments, and joint studies of beam-plasma interactions with the OSS-1 Fast Pulse Electron Generator (FPEG) of the Vehicle Charging and Potential Investigation (VCAP). Internal reports, published papers and oral presentations which involve PDP/OSS-1 data are listed in Sections 3 and 4. A PDP/OSS-1 scientific results meeting was held at the University of Iowa on April 19-20, 1983. This meeting was attended by most of the PDP and VCAP investigators and provided a forum for discussing and comparing the various results, particularly with regard to the shuttle orbiter environment. One of the most important functional objectives of the PDP on OSS-1 was to characterize the orbiter environment.

Pickett, Jolene S.↗

Plasma diagnostics package. Volume 2: Spacelab 2 section, part A

This volume (2), which consists of two parts (A and B), of the Plasma Diagnostics Package (PDP) Final Science Report contains a summary of all of the data reduction and scientific analyses which were performed using PDP data obtained on STS-51F as a part of the Spacelab 2 (SL-2) payload. This work was performed during the period of launch, July 29, l985, through June 30, l988. During this period the primary data reduction effort consisted of processing summary plots of the data received by 12 of the 14 instruments located on the PDP and submitting these data to the National Space Science Data Center (NSSDC). The scientific analyses during the performance period consisted of follow-up studies of shuttle orbiter environment and orbiter/ionosphere interactions and various plasma particle and wave studies which dealt with data taken when the PDP was on the Remote Manipulator System (RMS) arm and when the PDP was in free flight. Of particular interest during the RMS operations and free flight were the orbiter wake studies and joint studies of beam/plasma interactions with the SL-2 Fast Pulse Electron Generator (FPEG) of the Vehicle Charging and Potential Investigation (VCAP). Internal reports, published papers and presentations which involve PDP/SL-2 data are listed in Sections 3 and 4. A PDP/SL-2 scientific results meeting was held at the University of Iowa on June 10, l986. This meeting was attended by most of the PDP and VCAP investigators and provided a forum for discussing and comparing the various results, particularly with regard to the PDP free flight.

Pickett, Jolene S.↗

Overview of the Oregon Transect Ecosystem Research Project

The Oregon Transect Ecosystem Research (OTTER) project is a study of ecosystem functions in coniferous forests using the methods of computer modeling, experimental and theoretical remote sensing, and ecological field and laboratory techniques. The study is focused on predicting the major fluxes of carbon, nitrogen, and water, and the factors that dynamically regulate them. The OTTER project was conceived to test two major questions: (1) Can a generalized ecosystem simulation model, designed to use mainly parameters available from remote sensing, predict the functioning of forests across an environmentally variable region? and (2) To what extent can the variables required by this model be derived from remotely sensed data? The scientific objectives and scope of the project demanded that a coordinated effort be made to link ground measurements with remote sensing and modeling requirements. OTTER was selected as a focus for a National Aeronautics and Space Administration (NASA)-sponsored Multi-sensor Aircraft Campaign (MAC; combining NASA aircraft and sensors with those of others) on the basis of experience gained in past ecosystem studies and remote-sensing projects, and the importance of the OTTER objectives to NASA's long-range science goals and plans. Having several independent approaches available, both on the ground and from various remote-sensing platforms, proved valuable in estimating and validating many of the critical variables. This experience and cross comparison should help simplify future studies of a similar nature. Edited data sets from the OTTER project are now available to the scientific community on optical disks or via on-line data banks at NASA (Washington, D.C., USA) and Oregon State University (Corvallis, Oregon, USA).

Peterson, David L.↗

Software-Reconfigurable Processors for Spacecraft

A report presents an overview of an architecture for a software-reconfigurable network data processor for a spacecraft engaged in scientific exploration. When executed on suitable electronic hardware, the software performs the functions of a physical layer (in effect, acts as a software radio in that it performs modulation, demodulation, pulse-shaping, error correction, coding, and decoding), a data-link layer, a network layer, a transport layer, and application-layer processing of scientific data. The software-reconfigurable network processor is undergoing development to enable rapid prototyping and rapid implementation of communication, navigation, and scientific signal-processing functions; to provide a long-lived communication infrastructure; and to provide greatly improved scientific-instrumentation and scientific-data-processing functions by enabling science-driven in-flight reconfiguration of computing resources devoted to these functions. This development is an extension of terrestrial radio and network developments (e.g., in the cellular-telephone industry) implemented in software running on such hardware as field-programmable gate arrays, digital signal processors, traditional digital circuits, and mixed-signal application-specific integrated circuits (ASICs).

Farrington, Allen↗

Satellite Telemetry and Return Link (STARLink)

The High Altitude Missions Branch of NASA's Ames Research Center has been pursuing methods and communication architectures to decrease processing time and shorten the dissemination paths of the data from scientific experiments on board the high altitude ER-2 aircraft. The Satellite Telemetry and Return Link (STARLink) is an innovative approach for providing real-time data from existing experiments and allows for highly interactive future experiment systems on the ER-2. The concept involves placing an advanced wideband data link system on the ER-2 (and future NASA aircraft) for communicating to the NASA Tracking Data and Relay Satellite System (TDRSS) and its designated ground station. The emphasis is on providing full duplex real-time data between the ground station hub (and its remote nodes) and the on board experiments, allowing real-time processing and alteration to the experiments. This paper defines the concept, goals, multiplexing and data transmission system architecture, current capabilities, and future plans of the STARLink and its ability to provide a distributed interactive gateway node between the aircraft and various scientific centers worldwide.

Andrew Roberts↗

A flexible CAMAC based data system for Space Shuttle scientific instruments

An effort has been made within NASA to produce a low-cost modular system for implementation of Shuttle payloads based on the CAMAC standards for packaging and data transfer. A key element of such a modular system is a means for controlling the data system, collecting and processing the data for transmission to the ground, and issuing commands to the instrument either from the ground or based on the data collected. A description is presented of such a means based on a network of digital processors and CAMAC crate controllers, which allows for the implementation of instruments ranging from those requiring only a single CAMAC crate of functional modules and no data processing to ones requiring multiple crates and multiple data processors.

Ehrmann, C. H.↗

Evolution of the satellite telemetry data processing facility at the Goddard Space Flight Center.

Data from scientific and application satellites managed by the NASA Goddard Space Flight Center are acquired through the world-wide Spacecraft Tracking and Data Network (STDN). These data are forwarded to a central telemetry data processing facility whose primary objective is the timely provision of the data to users in a form suitable for their analysis. In a successful evolution, a satellite data processing facility must adapt to changing support requirements while operationally supporting active spacecraft. Advances in the technology of data transmission, data storage systems, and file management make it feasible to implement a third-generation system which will be able to satisfy experimenter requirements for the next ten years.

Keipert, F. A.↗

Configurable Hardware And Software For Multiple Related Uses

Control Monitor Unit (CMU) is system of configurable hardware and software undergoing development for use in controlling and monitoring complex systems of equipment. Provides comprehensive array of capabilities for such functions as processing equipment-test data for calibration and diagnosis, controlling operation of equipment in real time, simulating operation of equipment, and processing large streams of scientific-measurement data. Automates many of ground operations involved in preparing and testing spacecraft prior to launch. Also useful in variety of similar applications; for example, testing aircraft, ships, power plants, and automated production lines.

Uhrlaub, David R.↗

Aerosol, Cloud and Trace Gas Observations Derived from Airborne Hyperspectral Radiance and Direct Beam Measurements in Recent Field Campaigns

The AERONET (AErosol RObotic NETwork) ground-based suite of sunphotometers provides measurements of spectral aerosol optical depth (AOD), precipitable water and spectral sky radiance, which can be inverted to retrieve aerosol microphysical properties that are critical to assessments of aerosol-climate interactions. Because of data quality criteria and sampling constraints, there are significant limitations to the temporal and spatial coverage of AERONET data and their representativeness for global aerosol conditions. The 4STAR (Spectrometer for Sky-Scanning, Sun-Tracking Atmospheric Research) instrument, jointly developed by NASA Ames and PNNL with NASA Goddard collaboration, combines airborne sun tracking and AERONET-like sky scanning with spectroscopic detection. Being an airborne instrument, 4STAR has the potential to fill gaps in the AERONET data set. Dunagan et al. [2013] present results establishing the performance of the instrument, along with calibration, engineering flight test, and preliminary scientific field data. The 4STAR instrument operated successfully in the SEAC4RS [Studies of Emissions and Atmospheric Composition, Clouds and Climate Coupling by Regional Surveys] experiment in Aug./Sep. 2013 aboard the NASA DC-8 and in the DoE [Department of Energy]-sponsored TCAP [Two Column Aerosol Project, July 2012 & Feb. 2013] experiment aboard the DoE G-1 aircraft (Shinozuka et al., 2013), and acquired a wealth of data in support of mission objectives on all SEAC4RS and TCAP research flights. 4STAR provided direct beam measurements of hyperspectral AOD, columnar trace gas retrievals (H2O, O3, NO2; Segal-Rosenheimer et al., 2014), and the first ever airborne hyperspectral sky radiance scans, which can be inverted to yield the same products as AERONET ground-based observations. In addition, 4STAR measured zenith radiances underneath cloud decks for retrievals of cloud optical depth and effective diameter. In this presentation, we provide an overview of the new 4STAR capabilities for airborne field campaigns, with an emphasis on comparisons between 4STAR and AERONET sky radiances, and retrievals of aerosol microphysical properties based on sky radiance measurements, column trace gas amounts from spectral direct beam measurements and cloud property retrievals from zenith mode observations for a few select case studies in the SEAC4RS and TCAP experiments. We summarize the aerosol, trace gas, cloud and airmass characterization studies made possible by the combined 4STAR direct beam, and sky/zenith radiance observations.

Aerosol-Climate↗

Towards a study of synoptic-scale variability of the California current system

A West Coast satellite time series advisory group was established to consider the scientific rationale for the development of complete west coast time series of imagery of sea surface temperature (as derived by the Advanced Very High Resolution Radiometer on the NOAA polar orbiter, and near-surface phytoplankton pigment concentrations (as derived by the Coastal Zone Color Scanner on Nimbus 7). The scientific and data processing requirements for such time series are also considered. It is determined that such time series are essential if a number of scientific questions regarding the synoptic-scale dynamics of the California Current System are to be addressed. These questions concern both biological and physical processes.

Source record↗

NASA’s Earth System Observatory Formulation Progress

The 2017 Earth Science Decadal Survey by the National Academies of Science, Engineering, and Medicine identified five foundational observations, or Designated Observables (DO), to be implemented as missions by NASA. To address these five DO areas – Surface Biology and Geology; Mass Change; Aerosols; Cloud, Convection, and Precipitation; and Surface Deformation and Change – NASA is developing the Earth System Observatory (ESO) as an array of Earth-focused, interconnected satellite missions. The ESO will build on the strong history of international partnerships in NASA Earth science, with initial participation and collaboration on these missions across space agency partners including the Japanese Aerospace Exploration Agency (JAXA), Centre National D'Etudes Spatiales (CNES), Canadian Space Agency (CSA), Deutsches Zentrum für Luft- und Raumfahrt (DLR), and Agenzia Spaziale Italiana (ASI). Targeting launch dates in the late 2020s and early 2030s, the ESO will work as a single observatory, with each satellite in the ESO delivering its own valuable information, but taken together, the data and imagery will provide the global community with a multidimensional, holistic view of the Earth. In addition to furthering the world’s scientific knowledge, data gathered by ESO missions will provide actionable science to inform decisions related to climate change, disaster mitigation, and wildfires, improve real-time agricultural processes, and many other applications. This paper will provide an overview of the ESO development activities, as well as an update on the individual ESO missions currently in formulation – Atmosphere Observing System, Gravity Recovery and Climate Experiment-Continuity, and Surface Biology and Geology – including current mission architectures and concepts, international partner collaboration, science community engagement, and applications efforts, as well as how ESO data will be freely open and accessible to users all over the world.

NASA Earth Science↗

Optimizing a Small RNAseq Analysis Pipeline for NASA GeneLab Using Open-Source Tools and Libraries

Small RNA sequencing (small RNAseq) is a powerful tool for studying the regulation of gene expression in various organisms. Small RNAseq has been leveraged in space biology research to study how expression of small RNAs, e.g. micro RNAs (miRNAs), small interfering RNAs (siRNAs), and piwi-interacting RNAs (piRNAs), change upon exposure to the space environment. NASA GeneLab currently hosts small RNAseq raw data derived from space-relevant experiments on the Open Science Data Repository (OSDR). To maximize the accessibility of these data to the scientific community, in addition to hosting raw data, which is only interpretable by bioinformaticians, GeneLab plans to process all small RNAseq datasets and make those processed data available to the scientific community via the OSDR. In this study, we present the development of the GeneLab standardized pipeline for processing small RNAseq datasets. Using human, plant, and synthetic small RNAseq datasets, we interrogate various open-source software and publicly available databases to evaluate their accuracy and reproducibility in each step of the pipeline. For quality control and adapter detection and trimming, we evaluated TrimGalore!, FASTX, SeqKit, and DNApi methods to optimize alignment to reference genomes. We compared BWA, Bowtie, and Bowtie2 to determine the optimal alignment tool. For each alignment tool we also assessed various reference databases, including Ensembl reference genomes and different types of small RNA reference databases, including genome, hairpin, and miRNA references from the miRbase and MirGeneDB databases. To quantify the aligned data, we compared SAMtools, HTSeq, and RSEM for counting alignment events from each alignment tool used. Finally, we evaluated various tools, including DESeq2 and EdgeR, for data normalization and subsequent differential expression analysis. We will present the results from our comparative analyses for each pipeline step and propose a consensus pipeline for processing small RNAseq data derived from various organisms exposed to the space environment.

SmallRNAseq, NASA GeneLab, quality control, adapte↗

Laboratory Astrophysics: Enabling Scientific Discovery and Understanding

NASA's Science Strategic Roadmap for Universe Exploration lays out a series of science objectives on a grand scale and discusses the various missions, over a wide range of wavelengths, which will enable discovery. Astronomical spectroscopy is arguably the most powerful tool we have for exploring the Universe. Experimental and theoretical studies in Laboratory Astrophysics convert "hard-won data into scientific understanding". However, the development of instruments with increasingly high spectroscopic resolution demands atomic and molecular data of unprecedented accuracy and completeness. How to meet these needs, in a time of severe budgetary constraints, poses a significant challenge both to NASA, the astronomical observers and model-builders, and the laboratory astrophysics community. I will discuss these issues, together with some recent examples of productive astronomy/lab astro collaborations.

Kirby, K.↗

Atmospheric Research 2014 Technical Highlights

Atmospheric research in the Earth Sciences Division (610) consists of research and technology development programs dedicated to advancing knowledge and understanding of the atmosphere and its interaction with the climate of Earth. The Division's goals are to improve understanding of the dynamics and physical properties of precipitation, clouds, and aerosols; atmospheric chemistry, including the role of natural and anthropogenic trace species on the ozone balance in the stratosphere and the troposphere; and radiative properties of Earth's atmosphere and the influence of solar variability on the Earth's climate. Major research activities are carried out in the Mesoscale Atmospheric Processes Laboratory, the Climate and Radiation Laboratory, the Atmospheric Chemistry and Dynamics Laboratory, and the Wallops Field Support Office. The overall scope of the research covers an end-to-end process, starting with the identification of scientific problems, leading to observation requirements for remote-sensing platforms, technology and retrieval algorithm development; followed by flight projects and satellite missions; and eventually, resulting in data processing, analyses of measurements, and dissemination from flight projects and missions. Instrument scientists conceive, design, develop, and implement ultraviolet, infrared, optical, radar, laser, and lidar technology to remotely sense the atmosphere. Members of the various Laboratories conduct field measurements for satellite sensor calibration and data validation, and carry out numerous modeling activities. These modeling activities include climate model simulations, modeling the chemistry and transport of trace species on regional-to-global scales, cloud resolving models, and developing the next-generation Earth system models. Satellite missions, field campaigns, peer-reviewed publications, and successful proposals are essential at every stage of the research process to meeting our goals and maintaining leadership of the Earth Sciences Division in atmospheric science research. Figure 1.1 shows the 20-year record of peer-reviewed publications and proposals among the various Laboratories. This data shows that the scientific work being conducted in the Laboratories is competitive with the work being done elsewhere in universities and other government agencies. The office of Deputy Director for Atmospheric Research will strive to maintain this record by rigorously monitoring and promoting quality while emphasizing coordination and integration among atmospheric disciplines. Also, an appropriate balance will be maintained between the scientists' responsibility for large collaborative projects and missions and their need to carry out active science research as a principal investigator. This balance allows members of the Laboratories to improve their scientific credentials, and develop leadership potentials. Interdisciplinary research is carried out in collaboration with other laboratories and research groups within the Earth Sciences Division, across the Sciences and Exploration Directorate, and with partners in universities and other government agencies. Members of the Laboratories interact with the general public to support a wide range of interests in the atmospheric sciences. Among other activities, the Laboratories raise the public's awareness of atmospheric science by presenting public lectures and demonstrations, by making scientific data available to wide audiences, by teaching, and by mentoring students and teachers. The Atmosphere Laboratories make substantial efforts to attract and recruit new scientists to the various areas of atmospheric research. We strongly encourage the establishment of partnerships with Federal and state agencies that have operational responsibilities to promote the societal application of our science products. This report describes our role in NASA's mission, provides highlights of our research scope and activities, and summarizes our scientists' major accomplishments during calendar year 2014. The composition of the organization is shown in Figure 1.2 for each code. This report is published in a printed version with an electronic version on our atmospheres Web site, http://atmospheres.gsfc.nasa.gov/.

Technical↗

Modification of codes NUALGAM and BREMRAD, Volume 1

The NUGAM2 code predicts forward and backward angular energy differential and integrated distributions for gamma photons and fluorescent radiation emerging from finite laminar transport media. It determines buildup and albedo data for scientific research and engineering purposes; it also predicts the emission characteristics of finite radioisotope sources. The results are shown to be in very good agreement with available published data. The code predicts data for many situations in which no published data is available in the energy range up to 5 MeV. The NUGAM3 code predicts the pulse height response of inorganic (NaI and CsI) scintillation detectors to gamma photons. Because it allows the scintillator to be clad and mounted on a photomultiplier as in the experimental or industrial application, it is a more practical and thus useful code than others previously reported. Results are in excellent agreement with published Monte Carlo and experimental data in the energy range up to 4.5 MeV.

Steyn, J. J.↗

A data base of ASAS digital imagery

The Advanced Solid-State Array Spectroradiometer (ASAS) is an airborne, off-nadir tilting, imaging spectroradiometer that acquires digital image data for 29 spectral bands in the visible and near-infrared. The sensor is used principally for studies of the bidirectional distribution of solar radiation scattered by terrestial surfaces. ASAS has acquired data for a number of terrestial ecosystem field experiments and investigators have received over 170 radiometrically corrected, multiangle, digital image data sets. A database of ASAS digital imagery has been established in the Pilot Land Data System (PLDS) at the NASA/Goddard Space Flight Center to provide access to these data by the scientific community. ASAS, its processed data, and the PLDS are described, together with recent improvements to the sensor system.

Irons, James R.↗

A Web-based Collaborative Tool for Mars Analog Data Exploration

Solving today's complex research and modeling challenges are dependent on our ability to discover, access, integrate, and share information from multiple sources. The planetary sciences community is no exception'; over the last few years, the need for data mining and exploration tools that can expedite comparative studies between Martian and terrestrial analogs sites and aid the interpretation of Mars data sets has become evident. Data sharing maximizes scientific return from studies and data sets.

Necsoiu, M.↗