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At least 721 records · Page 40

Solution of a large hydrodynamic problem using the STAR-100 computer

A representative hydrodynamics problem, the shock initiated flow over a flat plate, was used for exploring data organizations and program structures needed to exploit the STAR-100 vector processing computer. A brief description of the problem is followed by a discussion of how each portion of the computational process was vectorized. Finally, timings of different portions of the program are compared with equivalent operations on serial machines. The speed up of the STAR-100 over the CDC 6600 program is shown to increase as the problem size increases. All computations were carried out on a CDC 6600 and a CDC STAR 100, with code written in FORTRAN for the 6600 and in STAR FORTRAN for the STAR 100.

Weilmuenster, K. J.↗

Thermohydrodynamic analysis of cryogenic liquid turbulent flow fluid film bearings, phase 2

The Phase 2 (1994) Annual Progress Report presents two major report sections describing the thermal analysis of tilting- and flexure-pad hybrid bearings, and the unsteady flow and transient response of a point mass rotor supported on fluid film bearings. A literature review on the subject of two-phase flow in fluid film bearings and part of the proposed work for 1995 are also included. The programs delivered at the end of 1994 are named hydroflext and hydrotran. Both codes are fully compatible with the hydrosealt (1993) program. The new programs retain the same calculating options of hydrosealt plus the added bearing geometries, and unsteady flow and transient forced response. Refer to the hydroflext & hydrotran User's Manual and Tutorial for basic information on the analysis and instructions to run the programs. The Examples Handbook contains the test bearing cases along with comparisons with experimental data or published analytical values. The following major tasks were completed in 1994 (Phase 2): (1) extension of the thermohydrodynamic analysis and development of computer program hydroflext to model various bearing geometries, namely, tilting-pad hydrodynamic journal bearings, flexure-pad cylindrical bearings (hydrostatic and hydrodynamic), and cylindrical pad bearings with a simple elastic matrix (ideal foil bearings); (2) improved thermal model including radial heat transfer through the bearing stator; (3) calculation of the unsteady bulk-flow field in fluid film bearings and the transient response of a point mass rotor supported on bearings; and (4) a literature review on the subject of two-phase flows and homogeneous-mixture flows in thin-film geometries.

Sanandres, Luis↗

Theory of an Automatic Seepage Meter and Ramifications for Applications

A new approach for measuring fluxes across surface water—groundwater interfaces was recently proposed. The Automatic Seepage Meter (ASM) is equipped with a precise water level sensor and digital memory that analyzes water level time series in a vertical tube inserted into a streambed. The ability to infer flux values with high temporal resolution relies on an accurate interpretation of water level dynamics inside the tube. Here, we reduce the three-dimensional hydrodynamic problem that describes the ASM water level in a variety of field conditions to a single ordinary differential equation. This novel general analytical solution for estimating ASM responses is more comprehensive and flexible than previous approaches and is applicable to the entire range of field conditions, including steady or transient stream stages, evaporation, rainfall, and noise. For example, our analysis determines the timing of the nonmonotonic ASM response to a monotonic linear stream stage variation and explains previously used empirical parabolic approximation for estimating fluxes. We present algorithms for simultaneous inference of vertical interface flux and hydraulic conductivity values together with an example code. We quantify how the accuracy of parameter estimation depends on test duration and noise amplitude and propose how our analysis can be used to optimize field test protocols. On this basis, changing the ASM geometry by increasing the radius and decreasing tube insertion depth may enable ASM field test protocols that estimate interface flux and hydraulic conductivity faster while maintaining desired accuracy. Potential applications of joint parameter estimation are suggested.

47 OTHER INSTRUMENTATION↗

mTOR regulates aerobic glycolysis through NEAT1 and nuclear paraspeckle-mediated mechanism in hepatocellular carcinoma

Hepatocellular Carcinoma (HCC) is a major form of liver cancer and a leading cause of cancer-related death worldwide. New insights into HCC pathobiology and mechanism of drug actions are urgently needed to improve patient outcomes. HCC undergoes metabolic reprogramming of glucose metabolism from respiration to aerobic glycolysis, a phenomenon known as the ‘Warburg Effect’ that supports rapid cancer cell growth, survival, and invasion. mTOR is known to promote Warburg Effect, but the underlying mechanism(s) remains poorly defined. The aim of this study is to understand the mechanism(s) and significance of mTOR regulation of aerobic glycolysis in HCC. We profiled mTORC1-dependent long non-coding RNAs (lncRNAs) by RNA-seq of HCC cells treated with rapamycin. Chromatin immunoprecipitation (ChIP) and luciferase reporter assays were used to explore the transcriptional regulation of NEAT1 by mTORC1. [U- 13 C]-glucose labeling and metabolomic analysis, extracellular acidification Rate (ECAR) by Seahorse XF Analyzer, and glucose uptake assay were used to investigate the role of mTOR-NEAT1-NONO signaling in the regulation of aerobic glycolysis. RNA immunoprecipitation (RIP) and NONO-binding motif scanning were performed to identify the regulatory mechanism of pre-mRNA splicing by mTOR-NEAT1. Myristoylated AKT1 (mAKT1)/NRASV 12 -driven HCC model developed by hydrodynamic transfection (HDT) was employed to explore the significance of mTOR-NEAT1 signaling in HCC tumorigenesis and mTOR-targeted therapy. mTOR regulates lncRNA transcriptome in HCC and that NEAT1 is a major mTOR transcriptional target. Interestingly, although both NEAT1_1 and NEAT1_2 are down-regulated in HCC, only NEAT1_2 is significantly correlated with poor overall survival of HCC patients. NEAT1_2 is the organizer of nuclear paraspeckles that sequester the RNA-binding proteins NONO and SFPQ. We show that upon oncogenic activation, mTORC1 suppresses NEAT1_2 expression and paraspeckle biogenesis, liberating NONO/SFPQ, which in turn, binds to U5 within the spliceosome, stimulating mRNA splicing and expression of key glycolytic enzymes. This series of actions lead to enhanced glucose transport, aerobic glycolytic flux, lactate production, and HCC growth both in vitro and in vivo. Furthermore, the paraspeckle-mediated mechanism is important for the anticancer action of US FDA-approved drugs rapamycin/temsirolimus. These findings reveal a molecular mechanism by which mTOR promotes the ‘Warburg Effect’, which is important for the metabolism and development of HCC, and anticancer response of mTOR-targeted therapy.

59 BASIC BIOLOGICAL SCIENCES↗

Cosmology with second- and third-order shear statistics for the Dark Energy Survey: Methods and simulated analysis

We present a new pipeline designed for the robust inference of cosmological parameters using both second- and third-order shear statistics. We build a theoretical model for rapid evaluation of three-point correlations using our fastnc code and integrate it into the cosmosis framework. We measure the two-point functions 𝜉 ± and the full configuration-dependent three-point shear correlation functions across all auto- and cross-redshift bins. We compress the three-point functions into the mass aperture statistic ⟨ℳ$^{3}_{ap}$⟩ for a set of 796 simulated shear maps designed to model the Dark Energy Survey Year 3 data. We estimate from it the full covariance matrix and model the effects of intrinsic alignments, shear calibration biases and photometric redshift uncertainties. We apply scale cuts to minimize the contamination from the baryonic signal as modeled through hydrodynamical simulations. We find a significant improvement of 83% on the figure of merit in the Ω m − 𝑆 8 plane when we add the ⟨ℳ$^{3}_{ap}$⟩ data to 𝜉 ± . Here, we present our findings for all relevant cosmological and systematic uncertainty parameters and discuss the complementarity of third-order and second-order statistics.

79 ASTRONOMY AND ASTROPHYSICS↗

The structure of the time-dependent interstellar shocks and grain destruction in the interstellar medium

A new theoretical analysis of the structure of interstellar shocks and the grain dynamics of these shocks is presented. The basic hydrodynamic equations for J-shocks in interstellar gas are given in which shock-driving pressure is allowed to be weakly time-dependent and the grains are treated as a separate two-dimensional fluid. Specific equations for the grain dynamics in the cooling postshock gas are derived. An analytic theory for the propagation of a shock driven into an interstellar cloud by the blast wave of a supernova remnant which sweeps over the cloud is developed. An improved calculation of the grain charge in postshock gas is described, giving a simple analytic approximation for the results. The consequences of including these processes in the numerical code of Seab and Shull (1983) are addressed, including the effect of realistic magnetic fields in low-density gas.

Mckee, Christopher F.↗

Simulated Time Lags of Hinode/XRT and SDO/AIA Lightcurves as an Indication of Loop Heating Scenario

The precise nature of the heating mechanism (location, duration) in coronal loops is still a matter of enormous research. We present results from a one-dimensional (1D) hydrodynamic loop simulation of a coronal loop which was run using different parameters such as loops length (50, 200 and 500 light-seconds), maximum temperature reached (3 million degrees Kelvin and 10 million degrees Kelvin), and abundances. For each scenario the model outputs were used to calculate the corresponding lightcurves as seen by X-ray telescope/Be-thin filter and various Extreme Ultra Violet Atmospheric Imaging Assembly channels. The lag time between the peak of these lightcurves was computed using cross-correlation and plotted as a function of loop length. Additional results were computed using the zero-dimensional Enthalpy-Based Thermal Evolution of Loops (EBTEL) code in order to test the compatibility of the two codes and to investigate additional loop lengths. Initial results indicate that the long (greater than 5000 seconds) lags observed in the approximately 100 light-seconds loops of active regions can only be reproduced using photospheric abundances and much longer loop lengths. This result suggests that the observed time lags cannot be completely explained by impulsive heating.

nanoflares↗

A hybrid adaptive multiresolution approach for the efficient simulation of reactive flows

Computational studies that use block-structured adaptive mesh refinement (AMR) approaches suffer from unnecessarily high mesh resolution in regions adjacent to important solution features. This deficiency limits the performance of AMR codes. In this work a novel hybrid adaptive multiresolution (HAMR) approach to AMR-based calculations is introduced to address this issue. The multiresolution (MR) smoothness indicators are used to identify regions of smoothness on the mesh where the computational cost of individual physics solvers may be decreased by replacing direct calculations with interpolation. We suggest an approach to balance the errors due to the adaptive discretization and the interpolation of physics quantities such that the overall accuracy of the HAMR solution is consistent with that of the MR-driven AMR solution. The performance of the HAMR scheme is evaluated for a range of test problems, from pure hydrodynamics to turbulent combustion.

97 MATHEMATICS AND COMPUTING↗

TEAMER: Water Tunnel Data from Testing the Pterofin Skimmer Concept

Pterofin's Skimmer concept relies on a flapping and pitching hydrofoil to extract hydrokinetic energy from water flows. The concept aims to utilize unsteady fluid dynamics phenomena (added mass, shed vorticity, and unsteady boundary layer development) to achieve higher lift coefficients, enabling increased power density of the hydrokinetic device and a fundamental shift in the rpm/torque scaling of the power take off compared with turbines. The Applied Research Laboratory at Penn State, in collaboration with Pterofin, designed and built a proof-of-concept flapping/pitching mechanism which was subsequently tested in ARL's 12-inch water tunnel facility. The mechanical power supplied to or extracted from the mechanism was measured for a range of hydrofoils provided by Pterofin over operating conditions including reduced frequency, Reynolds number, and the ratio between pitching and flapping amplitudes. The power lost to friction in the mechanism was removed from the net power measurement by means of a bare hub tare, with the resultant hydrodynamic power being used to calculate a mechanism-independent and non-dimensional power coefficient. The product of this effort is a dataset describing the power coefficient of a hydrofoil having simultaneous pitching and flapping motions, both of which are approximately sinusoidal. Power coefficients were collected for a range of primary design variables including: - Reduced frequency: 0.01 to 0.95 - Pitching/flapping peak angle ratio: 1.5 to 3.0 - Chord-based Reynolds number: 60,000 to 560,000 Secondary design variables relating to the hydrofoil geometry were explored including: - Aspect ratio - Planform shape - Section thickness distribution - Hydrofoil position relative to the pitching axis - Hydrofoil sweep angle relative to the pitching axis Measured data are provided in mean and time series formats. MATLAB scripts are provided which can be used to generate figures of time-averaged and phase-averaged hydrodynamic power coefficients calculated from the measured data. A complete description of the experiment and data reduction can be found in the Post Access Report for the Pterofin Skimmer test effort which will be available on the TEAMER website. This work was supported by the Pacific Energy Ocean Trust via a TEAMER award.

16 TIDAL AND WAVE POWER↗

MARS-Q modeling of kink-peeling instabilities in DIII-D QH-mode plasma

In quiescent H-mode (QH-mode) regime, edge harmonic oscillations (EHOs) are believed to provide necessary radial transport to prevent occurrence of large edge localized modes. A systematic modeling study is performed here on the low- n EHOs in a DIII-D QH-mode plasma (Chen et al 2016 Nucl. Fusion 56 076011), by utilizing the MARS-Q code (Liu et al 2013 Phys. Plasmas 20 042503). Both the n = 1 and n = 2 instabilities are found to be strongly localized near the plasma edge, exhibiting the edge-peeling characteristics. The DIII-D resistive wall is found to have minor effects on these instabilities. The plasma resistivity is found to strongly modify the mode growth rate. Assuming the Spitzer model for the plasma resistivity, the computed mode growth rate scales as S sup>-1/3 with S being the Lundquist number. Toroidal flow of the plasma slightly stabilizes these edge localized kink-peeling modes. Drift kinetic effects all have a destabilization effect on these modes. Non-perturbative magneto-hydrodynamic-kinetic hybrid computations find that the drift kinetic effects associated with thermal particle species push the peak location of the eigenmode radially inward but still in the pedestal region. The modeled plasma temperature and density fluctuations in the plasma edge region, as well as the poloidal magnetic field perturbations along both the low and high field sides of the plasma surface, are in good agreement with experimental measurements. Finally, the quasi-linear initial value simulations find a strong non-linear interplay between the kink-peeling instability and the toroidal flow near the plasma edge. The combined effect of the damping of the flow amplitude and change of the edge flow shear is found to be the stabilizing factor for the kink-peeling mode, leading to the mode saturation and thus EHOs.

Physics↗

Resistive wall mode stability and resonant field amplification in MAST high beta plasma

The n=1 (n is the toroidal mode number) resistive wall mode (RWM) instability and the resonant field amplification (RFA) due to a stable RWM response are numerically investigated for a MAST high-pressure plasma scenario, utilizing the MARS-F (Liu Y.Q. et al 2000 Phys. Plasmas 7 3681) and MARS-K (Liu Y.Q. et al 2008 Phys. Plasmas 15 112503) codes, for the purpose of understanding the potential RWM behavior in MAST-U plasmas. Ideal kink stability analysis identifies a target plasma, with parameters similar to that of the reference equilibrium reconstructed from a MAST high-pressure discharge, that accesses the RWM regime. The unstable n=1 RWM for the target equilibrium is subject to strong damping by the plasma toroidal flow and/or the drift kinetic effects from thermal particles. As a result, the mode is found to be stable under the experimental flow conditions, or even without flow stabilization if drift kinetic stabilization is included. The stability prediction is robust against variation of the assumed resistive wall minor radius. Active magneto-hydrodynamic (MHD) spectroscopy modeling, using the magnetic coils designed for controlling the edge localized modes (ELMs) in MAST-U as the antenna, shows strong resonant field amplification due to a stable RWM response in the target plasma. Maximal amplification, of 6-7 times larger than the applied vacuum field within the plasma, is obtained assuming a coil phasing of 120-180 degrees between the upper and lower rows of the ELM control coils. The MHD-kinetic hybrid model predicts generally higher RFA than the fluid model, in particular near the low-field and high-field sides of the plasma boundary surface. Furthermore, the MARS-F/K modeling thus shows that the RWM in MAST-U is subject to strong flow and kinetic stabilization, but can nevertheless be detected by active MHD spectroscopy.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Anomalous Absorption by the Two-Plasmon Decay Instability

Radiation-hydrodynamic simulations of directly driven fusion experiments at the Omega Laser Facility predict absorption accurately when targets are driven at low overlapped laser intensity. Discrepancies appear at increased intensity, however, with higher-than-expected laser absorption on target. Strong correlations with signatures of the two-plasmon decay (TPD) instability—including half-harmonic and hard-x-ray emission—indicate that TPD is responsible for this anomalous absorption. Scattered light data suggest that up to ≈ 30 % of the laser power reaching quarter-critical density can be absorbed locally when the TPD threshold is exceeded. A scaling of absorption versus TPD threshold parameter was empirically determined and validated using the laser–plasma simulation environment code.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

The simulation of the alternate turbopump development high pressure oxygen and fuel turbopumps for the space shuttle main engine using the Shaberth computer program

The Space Shuttle Main Engine (SSME) is basically comprised of a combustion chamber and nozzle, high and low pressure oxygen turbopumps and high and low pressure fuel turbopumps. In the current configuration, the high pressure fuel (HPTFP) and high pressure oxygen turbopumps (HPOTP) have experienced a history of ball bearing wear. The wear problem can be attributed to numerous factors including the hydrodynamic axial and radial loads caused by the flow of liquid oxygen and liquid hydrogen through the turbopump impellers and turbine. Also, friction effects between the rolling elements, races, and cage can create thermally induced bearing geometry changes. To alleviate some of the current configuration problems, an alternate turbopump development (ATD) was proposed. However, the ATD HPOTP and HPTFP are constrained to operate interchangeably with the current turbopumps, thus, the operation conditions must be similar. The ATD configuration features a major change in bearings used to support the integrated shaft, impeller, and turbine system. A single ball and single roller will replace the pump-end and turbine and duplex ball bearings. The Shaft-Bearing-Thermal (SHABERTH) computer code was used to model the ATD HPOTP and ATD HPFTP configurations. A two bearing model was used to simulate the HPOTP and HPFTP bearings and shaft geometry. From SHABERTH, a comparison of bearing reaction loads, frictional heat generation rates, and Hertz contact stresses will be attempted with analysis at the 109 percent and 65 percent power levels.

Mcdonald, Gary H.↗

Unsteady numerical simulations of the stability and dynamics of flames

In this report we describe the research performed at the Naval Research Laboratory in support of the NASA Microgravity Science and Applications Program over the past three years (from Feb. 1992) with emphasis on the work performed since the last microgravity combustion workshop. The primary objective of our research is to develop an understanding of the differences in the structure, stability, dynamics and extinction of flames in earth gravity and in microgravity environments. Numerical simulations, in which the various physical and chemical processes can be independently controlled, can significantly advance our understanding of these differences. Therefore, our approach is to use detailed time-dependent, multi-dimensional, multispecies numerical models to perform carefully designed computational experiments. The basic issues we have addressed, a general description of the numerical approach, and a summary of the results are described in this report. More detailed discussions are available in the papers published which are referenced herein. Some of the basic issues we have addressed recently are (1) the relative importance of wall losses and gravity on the extinguishment of downward-propagating flames; (2) the role of hydrodynamic instabilities in the formation of cellular flames; (3) effects of gravity on burner-stabilized flames, and (4) effects of radiative losses and chemical-kinetics on flames near flammability limits. We have also expanded our efforts to include hydrocarbon flames in addition to hydrogen flames and to perform simulations in support of other on-going efforts in the microgravity combustion sciences program. Modeling hydrocarbon flames typically involves a larger number of species and a much larger number of reactions when compared to hydrogen. In addition, more complex radiation models may also be needed. In order to efficiently compute such complex flames recent developments in parallel computing have been utilized to develop a state-of-the-art parallel flame code. This is discussed below in some detail after a brief discussion of the numerical models.

Kailasanath, K.↗

Shell-model studies of the astrophysical r p -process reactions S 34 ( p , γ ) Cl 35 and Cl 34 g , m ( p , γ ) Ar 35

Background: Dust grains condensed in the outflows of presolar classical novae should have been present in the protosolar nebula. Candidates for such presolar nova grains have been found in primitive meteorites and can in principle be identified by their isotopic ratios, but the ratios predicted by state-of-the-art one-dimensional hydrodynamic models are uncertain due to nuclear-physics uncertainties. Purpose: To theoretically calculate the thermonuclear rates and uncertainties of the S 34 ( p , γ ) Cl 35 and Cl 34 g , m ( p , γ ) Ar 35 reactions and investigate their impacts on the predicted 34 S/ 32 S isotopic ratio for presolar nova grains. Method: A shell-model approach in a (0 +1 ) ℏ ω model space was used to calculate the properties of resonances in the 34 S(p ,γ ) 35 Cl and 34 g,m Cl (p ,γ ) 35 Ar reactions and their thermonuclear rates. Uncertainties were estimated using a Monte Carlo method. The implications of these rates and their uncertainties on sulfur isotopic nova yields were investigated using a postprocessing nucleosynthesis code. The rates for transitions from the ground state of 34 Cl as well as from the isomeric first excited state of 34 Cl were explicitly calculated. Results: At energies in the resonance region near the proton-emission threshold, many negative-parity states appear. Energies, spectroscopic factors, and proton-decay widths are reported. The resulting thermonuclear rates are compared with previous determinations. Conclusions: The shell-model calculations alone are sufficient to constrain the variation of the 34 S/ 32 S ratios to within about 30%. Uncertainties associated with other reactions must also be considered, but in general we find that the 34 S/ 32 S ratios are not a robust diagnostic to clearly identify presolar grains made from nova ejecta.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Same-sided successive-shock HED instability experiments

Inertial confinement fusion (ICF) and high-energy density (HED) physics experiments experience complicated forcing for instability growth and mix due to the ubiquitous presence of multiple shocks interacting with perturbations on multiple material interfaces. One common driver of instability growth is successive shocks from the same direction. However, there is a severe lack of analytic work and modeling validation for same-sided successive shocks since they are extremely difficult to achieve with conventional (non-HED) drivers. Successive shocks access a large instability parameter space; idealized fluid theory [K. O. Mikaelian, Phys. Rev. A 31, 410 (1985)] predicts 15 different interface evolution scenarios for a sinusoidal perturbation. Growth becomes more complex for multi-mode, compressible HED systems. The Mshock campaign is the first experiment in any fluid regime to probe a wide portion of successive shock parameter space. This is enabled by our development of a hybrid direct/indirect drive platform capable of creating independently controllable successive shocks on the National Ignition Facility. These experiments have delivered the first data capable of rigorously challenging our models and their ability to accurately capture Richtmyer–Meshkov growth under successive shocks. Single-mode and two-mode experiments have successfully demonstrated the ability to access and control the various growth scenarios of the shocked interface, including re-inversion, freeze out, and continued growth. Simulations and theoretical modeling are shown to accurately capture the experimental observations in the linear growth phase, giving us confidence in our ICF/HED design codes.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Hydrodynamic stability problem formulated by numerical solutions of the Navier-Stokes equations

The problem of hydrodynamic stability and the transition from laminar to turbulent flows are reformulated by seeking numerical solutions of the full, unapproximated Navier-Stokes equations. This method differs significantly from the well known Orr-Sommerfeld equation approach. The oncoming laminar flow is disturbed by forced, time dependent perturbations. The magnitudes of these perturbations are arbitrary. Then, the ensuing spatial and temporal development of the imposed perturbations on the basic flow is calculated by direct numerical solutions of the time dependent Navier-Stokes equations. One of the main advantages of this method is its ability to simulate nonlinear processes. As a specific application of this technique to SSME (Space Shuttle Main Engine) flow configurations, computer programs have been written for the two dimensional flow over a backward facing step. This numerical code will be tested for operational use as part of a continued research collaboration effort with the NASA/MSFC counterparts.

Hyun, J. M.↗