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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 721 records · Page 40
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NASA NTRS1999

The Variability and Predictability of Precipitation over Southeast Asian

The large scale atmospheric moisture budget, including precipitation, moisture flux convergence, and evaporation is described over southeast Asian. ne results are from the Goddard Earth Observing System (GEOS-1) data assimilation system for the period March 1981 - February 1995. On average, in the late spring and early summer season, precipitation is largely balanced by the atmospheric moisture flux convergence over southeast Asian; evaporation is also an important contributor. The seasonal variability of precipitation is best related to variations in the moisture flux convergence. On the monthly time scales, both the precipitable water and precipitation anomalies are most closely related to moisture flux convergence anomalies and less closely related to evaporation anomalies. The impact of the low-level jet (LLJ) on the strong low-level moisture flux convergence will be discussed. An ensemble of GEOS-2 atmospheric General Circulation Model (GCM) seasonal forecasts and long-term simulation are analyzed to assess the controlling influences of boundary forcing and memory of initial conditions. We also assess the variability and potential predictability from these experiments.

Chang, Yehui↗
DOE OSTI2021

Assimilation of X-band Phased-Array Radar Data with EnKF for the Analysis and Warning Forecast of a Tornadic storm

The impact of assimilating China's operational X-band Phased-Array radar's (X-PAR) data on the analysis and warning forecast of the vortex structure and intensity of the June 8, 2018 Foshan, Guangdong province, tornadic storm was investigated for the first time using an Ensemble Kalman Filter (EnKF) data assimilation system. Both radar radial velocity (Vr) and reflectivity (Z) from two S-band operational radars and one X-PAR were assimilated. Deterministic forecasts were launched every 6 min from 05:42 UTC (20 min before the tornado touched down) to 06:00 UTC from the EnKF mean analysis field. Five experiments were conducted to examine the added capability of Z assimilation of the EnKF system, and to investigate the impact of assimilating X-PAR data on the analysis and prediction of the tornadic storm. Compared to the experiment without Z assimilation, the assimilation of Z reduced the analysis error and greatly reduced the forecast error of Z. Furthermore, the assimilation of X-PAR data greatly improved the vortex structure of the tornadic storm at low levels, and improved the intensity of the rear inflow of the tornadic storm, especially with a higher assimilation frequency. Compared to the experiments without X-PAR data assimilation, assimilating X-PAR data improved the predictability of tornadic storm.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

An adaptive knowledge-based data-driven approach for turbulence modeling using ensemble learning technique under complex flow configuration: 3D PWR sub-channel with DNS data

This work describes a new approach to increase the accuracy of Reynolds-averaged Navier–Stokes (RANS) in modeling turbulence flow leveraging the machine learning technique. Traditionally, different turbulence models for Reynolds stress are developed for different flow patterns based on human knowledge. Each turbulence model has a certain application domain and prediction uncertainty. In recent years, with the rapid improvements of machine learning techniques, researchers start to develop an approach to compensate for the prediction discrepancy of traditional turbulence models with statistical models and data. However, the approach has deficiencies in several aspects. For example, the amount of human knowledge introduced to the statistical model couldn’t be controlled, which makes the statistical model learn from a very naïve stage and limits its application. In this work, a new approach is developed to address those deficiencies. Here, the new approach uses the “ensemble learning” technique to control the amount of human knowledge introduced into the statistical model. Therefore, the new approach could be adaptive to the multiple application domains. In conclusion, according to the results of case study, the new approach shows higher accuracy than both traditional turbulence models and the previous machine learning approach.

42 ENGINEERING↗
DOE OSTI2024

Automated Operational Forecasting of Monsoon Low Pressure Systems

Monsoon low pressure systems (LPSs) are the dominant rain-bearing weather system of South Asia, often producing extreme precipitation and hydrological disasters in a region inhabited by nearly two billion people. Despite the importance of these storms, no operational system has automatically identified and tracked LPS in real time in numerical weather prediction model output; many commonly used vortex-tracking algorithms are ill suited for monsoon LPS because of the weak winds and cold cores of these systems. Here, we describe a new system that uses optimized algorithms to identify monsoon LPS in short- to medium-range forecasts from the U.S. Global Ensemble Forecast System (GEFS) and a version of the deterministic Global Forecast System (GFS) adapted and used operationally by the Indian Institute of Tropical Meteorology (IITM). We also assess the historical performance of these models in forecasting South Asian monsoon LPS, comparing this with the performance of the Integrated Forecasting System of the ECMWF. We assess the accuracy of model predictions of LPS genesis, position, intensity, and precipitation rates for forecast lead times of 1–5 days, yielding quantitative information on model biases to guide operational forecasters and disaster managers. The system we introduce here could be extended to other low-latitude regions affected by dynamically weak, heavily precipitating atmospheric vortices that are often not included in tropical cyclone inventories.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS2022

CMEs and SEPs During November–December 2020: A Challenge for Real-Time Space Weather Forecasting

Predictions of coronal mass ejections (CMEs) and solar energetic particles (SEPs) are a central issue in space weather forecasting. In recent years, interest in space weather predictions has expanded to include impacts at other planets beyond Earth as well as spacecraft scattered throughout the heliosphere. In this sense, the scope of space weather science now encompasses the whole heliospheric system, and multipoint measurements of solar transients can provide useful insights and validations for prediction models. In this work, we aim to analyze the whole inner heliospheric context between two eruptive flares that took place in late 2020, that is, the M4.4 flare of 29 November and the C7.4 flare of 7 December. This period is especially interesting because the STEREO-A spacecraft was located ∼60° east of the Sun–Earth line, giving us the opportunity to test the capabilities of “predictions at 360°” using remote-sensing observations from the Lagrange L1 and L5 points as input. We simulate the CMEs that were ejected during our period of interest and the SEPs accelerated by their shocks using the WSA–Enlil–SEPMOD modeling chain and four sets of input parameters, forming a “mini-ensemble.” We validate our results using in situ observations at six locations, including Earth and Mars. We find that, despite some limitations arising from the models' architecture and assumptions, CMEs and shock-accelerated SEPs can be reasonably studied and forecast in real time at least out to several tens of degrees away from the eruption site using the prediction tools employed here.

Coronal mass ejections↗
DOE OSTI2022

Superresolved Motions of Single Molecular Catalysts during Polymerization Show Wide Distributions

The motion of single molecular ruthenium catalysts during and after single turnover events of ring-opening metathesis polymerization is imaged through single-molecule superresolution tracking with a positional accuracy of ±32 nm. This tracking is achieved through the real-time incorporation of spectrally tagged monomer units into active polymer chain ends during living polymerization; thus, by design, only active-catalyst motion is detected and imaged, without convolution by inactive catalysts. The catalysts show diverse individualistic diffusive behaviors with respect to time that persist for up to 20 s. Catalysts occupy three mobility populations: quasi-stationary (23%), intermediate (53%, 65 nm), and large (24%, 145 nm) step sizes. Differences in catalyst mobility populations also exist between individual aggregates (p < 0.001). Such differential motion indicates widely different local catalyst microenvironments during the catalytic turnover. These mobility differences are uniquely observable through single-catalyst microscopy and are not measurable through traditional ensemble analytical techniques for characterizing the behavior of molecular catalysts, such as nuclear magnetic resonance spectroscopy. The measured distributions of active molecular catalyst motions would not be readily predictable through modeling or first-principles, and the range likely impacts individual catalyst turnover rate and selectivity. This range plausibly contributes to property distributions observable in bulk polymers, such as molecular weight polydispersity (e.g., 1.9 in this system), leading to a revised understanding of the mechanistic, microscale origins of macroscale polymer properties.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2020

Characterization of organic aerosol across the global remote troposphere: a comparison of ATom measurements and global chemistry models

The spatial distribution and properties of submicron organic aerosol (OA) are among the key sources of uncertainty in our understanding of aerosol effects on climate. Uncertainties are particularly large over remote regions of the free troposphere and Southern Ocean, where very few data have been available and where OA predictions from AeroCom Phase II global models span 2 to 3 orders of magnitude, greatly exceeding the model spread over source regions. The (nearly) pole-to-pole vertical distribution of non-refractory aerosols was measured with an aerosol mass spectrometer onboard the NASA DC-8 aircraft as part of the Atmospheric Tomography (ATom) mission during the Northern Hemisphere summer (August 2016) and winter (February 2017). This study presents the first extensive characterization of OA mass concentrations and their level of oxidation in the remote atmosphere. OA and sulfate are the major contributors by mass to submicron aerosols in the remote troposphere, together with sea salt in the marine boundary layer. Sulfate was dominant in the lower stratosphere. OA concentrations have a strong seasonal and zonal variability, with the highest levels measured in the lower troposphere in the summer and over the regions influenced by biomass burning from Africa (up to 10 µg sm -3 ). Lower concentrations (~0.1–0.3 µg sm -3 ) are observed in the northern middle and high latitudes and very low concentrations (<0.1 µg sm -3 ) in the southern middle and high latitudes. The ATom dataset is used to evaluate predictions of eight current global chemistry models that implement a variety of commonly used representations of OA sources and chemistry, as well as of the AeroCom-II ensemble. The current model ensemble captures the average vertical and spatial distribution of measured OA concentrations, and the spread of the individual models remains within a factor of 5. These results are significantly improved over the AeroCom-II model ensemble, which shows large overestimations over these regions. However, some of the improved agreement with observations occurs for the wrong reasons, as models have the tendency to greatly overestimate the primary OA fraction and underestimate the secondary fraction. Measured OA in the remote free troposphere is highly oxygenated, with organic aerosol to organic carbon (OA/OC) ratios of ~2.2–2.8, and is 30 %–60 % more oxygenated than in current models, which can lead to significant errors in OA concentrations. The model–measurement comparisons presented here support the concept of a more dynamic OA system as proposed by Hodzic et al. (2016), with enhanced removal of primary OA and a stronger production of secondary OA in global models needed to provide better agreement with observations.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRSDate not supplied

Multihierarchy Gaussian Process Models for Probabilistic Aerodynamic Databases using Uncertain Nominal and Off-Nominal Configuration Data

Probabilistic aerodynamic databases are a crucial component of the development lifecycle for aerospace vehicles. A key challenge when building aerodynamic databases is that most data used to construct them represent various simplifications of the real flight vehicle. For example, wind tunnel models often simplify the vehicle geometry and surface roughness characteristics, while CFD computations often make simplifications to the physics being modeled, such as fully laminar or turbulent calculations. Multifidelity data fusion models rely on a user being able to define a hierarchy of fidelity levels anchored to some "truth" data. This approach is unsatisfactory when no data can be considered to accurately reflect real flight conditions. In this work, we provide an alternative approach by presenting a consistent mathematical framework for building probabilistic aerodynamic databases in the form of a conditional probability distribution described by an ensemble of multifidelity Gaussian Processes. Instead of relying on a single hierarchy of data fidelity levels, the presented framework identifies a "nominal" configuration and potential corrections to the nominal which represent specific physical phenomena not represented in the nominal data. The nominal and correction functions themselves are constructed as multifidelity Gaussian Processes and linearly combined to form an ensemble model which fuses the uncertainties associated nominal and correction models. Results obtained using the proposed framework on a simplified Orion Crew Module wind tunnel dataset demonstrate the predictive capability of the multihierarchy framework. We further demonstrate the benefits of such a probabilistic aerodynamic database approach through function sampling and computing the conditional distributions of derived quantities, such as the trim angle of attack and aerodynamic coefficients at trim.

Gaussian Processes↗
NASA NTRS2022

NASA's NMME-Based S2S Hydrologic Forecast System for Food Insecurity Early Warning in Southern Africa

In situ hydrologic monitoring over regions most susceptible to food insecurity can be a challenge in current times due to various socio-economic and political issues in combination with environmental factors such as ongoing famine or drought. Hydrologic monitoring and initializing forecasts based on remotely sensed and analyzed data can contribute significantly to early warning in such regions. Routine hydrologic forecasts, as provided by NASA’s Hydrologic Forecasting and Analysis System (NHyFAS), are a recent addition to early warning systems. A custom instance of NHyFAS, termed FLDAS-Forecast, is used by FEWS NET’s Land Data Assimilation System (FLDAS). The FLDAS-Forecast’s dynamic forecasting component was originally set up with Goddard Earth Observing System (GEOS) forecast inputs and has been recently expanded with precipitation forecast forcing from the North American Multi-Model Ensemble (NMME). This paper describes the improvements in seasonal hydrologic forecasts produced with this updated system. Evaluations in this study focus on soil moisture across southern Africa’s growing season. Soil moisture forecasts are benchmarked and evaluated relative to climatology-based forecasts and historic runs, which are driven by observation-based meteorological forcing fields, and they are verified with remotely sensed observations of soil moisture and vegetation. Through multiple deterministic and probabilistic skill assessments, we show that using the larger ensemble of NMME precipitation inputs in the forecast system results in higher quality hydrologic forecasts than are allowed by climatology- or GEOS-only-based forecasts. Further, the near-real-time NMME-based rootzone soil moisture forecasts were able to correctly predict developing drought conditions over southern Africa through late 2019 and into early 2020.

Hydrologic forecasts↗
DOE OSTI2020

Benchmarking and parameter sensitivity of physiological and vegetation dynamics using the Functionally Assembled Terrestrial Ecosystem Simulator (FATES) at Barro Colorado Island, Panama

Plant functional traits determine vegetation responses to environmental variation, but variation in trait values is large, even within a single site. Likewise, uncertainty in how these traits map to Earth system feedbacks is large. We use a vegetation demographic model (VDM), the Functionally Assembled Terrestrial Ecosystem Simulator (FATES), to explore parameter sensitivity of model predictions, and comparison to observations, at a tropical forest site: Barro Colorado Island in Panama. We define a single 12-dimensional distribution of plant trait variation, derived primarily from observations in Panama, and define plant functional types (PFTs) as random draws from this distribution. We compare several model ensembles, where individual ensemble members vary only in the plant traits that define PFTs, and separate ensembles differ from each other based on either model structural assumptions or non-trait, ecosystem-level parameters, which include (a) the number of competing PFTs present in any simulation and (b) parameters that govern disturbance and height-based light competition. While single-PFT simulations are roughly consistent with observations of productivity at Barro Colorado Island, increasing the number of competing PFTs strongly shifts model predictions towards higher productivity and biomass forests. Different ecosystem variables show greater sensitivity than others to the number of competing PFTs, with the predictions that are most dominated by large trees, such as biomass, being the most sensitive. Changing disturbance and height-sorting parameters, i.e., the rules of competitive trait filtering, shifts regimes of dominance or coexistence between early- and late-successional PFTs in the model. Increases to the extent or severity of disturbance, or to the degree of determinism in height-based light competition, all act to shift the community towards early-successional PFTs. In turn, these shifts in competitive outcomes alter predictions of ecosystem states and fluxes, with more early-successional-dominated forests having lower biomass. It is thus crucial to differentiate between plant traits, which are under competitive pressure in VDMs, from those model parameters that are not and to better understand the relationships between these two types of model parameters to quantify sources of uncertainty in VDMs.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS2016

Prediction of Weather Impacts on Airport Arrival Meter Fix Capacity

This paper introduces a data driven model for predicting airport arrival capacity with a look-ahead time 2-8 hour forecast. The model is suitable for air traffic flow management by explicitly investigating the impact of convective weather on airport arrival meter fix throughput. Estimation of the arrival airport capacity under arrival meter fix flow constraints due to severe weather is an important part of Air Traffic Management (ATM). Airport arrival capacity can be reduced if one or more airport arrival meter fixes are partially or completely blocked by convective weather. When the predicted airport arrival demands exceed the predicted available airport's arrival capacity for a sustained period, Ground Delay Program (GDP) operations will be triggered by ATM system. Serious imbalances between demand and capacity occur most frequently when the airport capacity is severely degraded due to either bad airport terminal surface weather or inclement convective weather around airport arrival fixes. A model that predicts the weather-impacted airport arrival meter fix throughput may help ATM personnel to plan GDP operations more efficiently. This paper identifies the characteristics of air traffic flow across arrival meter fixes at Newark Liberty International Airport (EWR). The proposed approach, based on machine-learning methods, is developed to predict the weather impacted EWR arrival Meter Fix (MF) throughput. Sector forecast coverage is used to envision the weather impact on airport arrival MF flow, and the validation is accomplished by using Convective Weather Avoidance Model (CWAM) 0.5 to 2-hour and Collaborative Convective Forecast Product (CCFP) 4 to 8-hour look-ahead forecast data for the period of April-September in 2014. Furthermore, the regression tree ensemble learning of random forests approach for translating a sector forecast coverage model to an EWR arrival meter fix throughput model is examined. The results suggest that ATM decision makers in charge of MF flow control and GDP planning may benefit from adopting the airport arrival meter capacity prediction models to estimate the inclement weather impacts.

Wang, Yao X.↗
DOE OSTI2021

Evaluation of Subseasonal-to-Seasonal (S2S) precipitation forecast from the North American Multi-Model ensemble phase II (NMME-2) over the contiguous U.S.

The second phase of the North America Multi-Model Ensemble (NMME-2) provides globally available Subseasonal-to-Seasonal (S2S) precipitation forecasts with a daily resolution. The S2S precipitation forecasts are getting increasing attention for their potentials in providing hydrometeorological forcing information for water resources planning at an extended range. However, the forecast skills of many existing S2S forecast products will significantly decrease when the lead time increases, hindering their applicability for watershed-scale hydrologic modeling. Therefore, forecast validation and large-scale evaluation are of great importance for water resources planning and hydrological applications. In this study, we comprehensively evaluate the S2S precipitation forecasts from the NMME-2 dataset over the contiguous United States (CONUS) and during the study period from 1982 to 2011. Three aspects of precipitation forecast capabilities are compared and analyzed: bias, skill scores, and the ability to predict extreme precipitation events. The Parameter-elevation Regressions on Independent Slopes Model (PRISM) is used as ground truth reference. Differs from other regional forecast validation study, we further examined and analyzed the dependences of NMME-2 precipitation forecast skills according to different seasonality, geographical locations, and lead times. Results show that the forecast biases are not sensitive to lead times but are seasonally dependent of all NMME-2 models. Overestimations are found in the Western U.S. in cooler seasons while underestimations are observed in the central regions of the U.S. in warmer seasons. The forecast skill of all individual NMME-2 models generally decreases as increases of lead times. The simple model averaging (SMA) of five NMME-2 models demonstrates a higher forecast skill than any individual NMME-2 models. Spatially, the highest forecast skill scores are observed at coastal areas in the Western U.S. with an one-week lead time. As compared to the historical resampled forecasts, NMME-2 also shows better performance in predicting extreme precipitation events above 99% percentiles and below 1% percentiles with higher probability of detections and lower false alarm ratios. Finally, the obtained results suggest the great potentials of NMME-2 precipitation forecasts in assisting ensemble hydrologic forecasts at the S2S scale over the CONUS.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Analyzing and Exploring Training Recipes for Large-Scale Transformer-Based Weather Prediction

Abstract The rapid rise of deep learning (DL) in numerical weather prediction (NWP) has led to a proliferation of models which forecast atmospheric variables with comparable or superior skill than traditional physics-based NWP. However, among these leading DL models, there is a wide variance in both the training settings and architecture used. Further, the lack of thorough ablation studies makes it hard to discern which components are most critical to success. In this work, we show that it is possible to attain high forecast skill even with relatively off-the-shelf architectures, simple training procedures, and moderate compute budgets. Specifically, we train a minimally modified Swin Transformer V2 (SwinV2) on ERA5 data and find that it attains superior skill in terms of mean-square errors of deterministic forecasts when compared against the European Centre for Medium-Range Weather Forecasts’ Integrated Forecasting System (IFS). Almost all DL–NWP systems share a core set of hyperparameters and design decisions. To aid and expedite future DL–NWP research, we present an in-depth, systematic exploration of different loss functions, model sizes and depths, patch sizes, and multistep training objectives. We also examine the model performance with metrics beyond the typical accuracy (ACC) and RMSE and investigate how the performance scales with model size. Through our open-source code, scoring pipelines, and models, we share our findings on key aspects of the training pipeline. These ablations reduce the necessity for expensive hyperparameter tuning and lower the barrier to entry for future DL–NWP research. Significance Statement This study investigates the potential of using large-scale transformer-based models for weather prediction, showing that it is possible to achieve high forecast accuracy with simpler, off-the-shelf architectures. By training a minimally modified SwinV2 transformer on ERA5 data, we show that the model achieves competitive forecast skill in terms of mean-square error for key variables, outperforming the European Centre for Medium-Range Weather Forecasts’ Integrated Forecasting System (IFS) at all lead times. Our findings suggest that effective training strategies, such as multistep fine-tuning and channel-weighted losses, significantly enhance the model’s performance. However, we also highlight that these improvements come with trade-offs in other areas, such as ensemble spread and high-frequency spatial detail. This work highlights the promise of deep learning in improving weather forecasts, which could lead to better preparedness and response to weather events, ultimately benefiting society by providing more reliable weather predictions.

Willard, Jared D. [Lawrence Berkeley National Labo↗
DOE OSTI2024

Probabilistic projections of the Amery Ice Shelf catchment, Antarctica, under conditions of high ice-shelf basal melt

Abstract. Antarctica's Lambert Glacier drains about one-sixth of the ice from the East Antarctic Ice Sheet and is considered stable due to the strong buttressing provided by the Amery Ice Shelf. While previous projections of the sea-level contribution from this sector of the ice sheet have predicted significant mass loss only with near-complete removal of the ice shelf, the ocean warming necessary for this was deemed unlikely. Recent climate projections through 2300 indicate that sufficient ocean warming is a distinct possibility after 2100. This work explores the impact of parametric uncertainty on projections of the response of the Lambert–Amery system (hereafter “the Amery sector”) to abrupt ocean warming through Bayesian calibration of a perturbed-parameter ice-sheet model ensemble. We address the computational cost of uncertainty quantification for ice-sheet model projections via statistical emulation, which employs surrogate models for fast and inexpensive parameter space exploration while retaining critical features of the high-fidelity simulations. To this end, we build Gaussian process (GP) emulators from simulations of the Amery sector at a medium resolution (4–20 km mesh) using the Model for Prediction Across Scales (MPAS)-Albany Land Ice (MALI) model. We consider six input parameters that control basal friction, ice stiffness, calving, and ice-shelf basal melting. From these, we generate 200 perturbed input parameter initializations using space filling Sobol sampling. For our end-to-end probabilistic modeling workflow, we first train emulators on the simulation ensemble and then calibrate the input parameters using observations of the mass balance, grounding line movement, and calving front movement with priors assigned via expert knowledge. Next, we use MALI to project a subset of simulations to 2300 using ocean and atmosphere forcings from a climate model for both low- and high-greenhouse-gas-emission scenarios. From these simulation outputs, we build multivariate emulators by combining GP regression with principal component dimension reduction to emulate multivariate sea-level contribution time series data from the MALI simulations. We then use these emulators to propagate uncertainty from model input parameters to predictions of glacier mass loss through 2300, demonstrating that the calibrated posterior distributions have both greater mass loss and reduced variance compared to the uncalibrated prior distributions. Parametric uncertainty is large enough through about 2130 that the two projections under different emission scenarios are indistinguishable from one another. However, after rapid ocean warming in the first half of the 22nd century, the projections become statistically distinct within decades. Overall, this study demonstrates an efficient Bayesian calibration and uncertainty propagation workflow for ice-sheet model projections and identifies the potential for large sea-level rise contributions from the Amery sector of the Antarctic Ice Sheet after 2100 under high-greenhouse-gas-emission scenarios.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Large Scale Study of Ligand–Protein Relative Binding Free Energy Calculations: Actionable Predictions from Statistically Robust Protocols

The accurate and reliable prediction of protein–ligand binding affinities can play a central role in the drug discovery process as well as in personalized medicine. Of considerable importance during lead optimization are the alchemical free energy methods that furnish an estimation of relative binding free energies (RBFE) of similar molecules. Recent advances in these methods have increased their speed, accuracy, and precision. This is evident from the increasing number of retrospective as well as prospective studies employing them. However, such methods still have limited applicability in real-world scenarios due to a number of important yet unresolved issues. Here, we report the findings from a large data set comprising over 500 ligand transformations spanning over 300 ligands binding to a diverse set of 14 different protein targets which furnish statistically robust results on the accuracy, precision, and reproducibility of RBFE calculations. We use ensemble-based methods which are the only way to provide reliable uncertainty quantification given that the underlying molecular dynamics is chaotic. These are implemented using TIES (Thermodynamic Integration with Enhanced Sampling). Results achieve chemical accuracy in all cases. Ensemble simulations also furnish information on the statistical distributions of the free energy calculations which exhibit non-normal behavior. We find that the “enhanced sampling” method known as replica exchange with solute tempering degrades RBFE predictions. We also report definitively on numerous associated alchemical factors including the choice of ligand charge method, flexibility in ligand structure, and the size of the alchemical region including the number of atoms involved in transforming one ligand into another. Our findings provide a key set of recommendations that should be adopted for the reliable application of RBFE methods.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

Prediction of Distributed River Sediment Respiration Rates Using Community-Generated Data and Machine Learning

River sediment microbial respiration is a key indicator of ecosystem functioning and the biogeochemical fluxes across this critical zone link surface and subsurface waters. As such, there is tremendous interest in measuring and mapping these respiration rates. Respiration observations are expensive and labor intensive; there is limited data available to the community. An open science, collaborative initiative is collecting samples for respiration rate analysis and multi-scale metadata; this evolving data set is being used for making machine learning (ML) predictions at unsampled sites to help inform continued community engagement. However, it is a challenge to find an optimum configuration for ML models to work with this feature-rich (i.e., 100+ possible input variables) data set. Here, we present results from a two-tiered approach to managing the analysis of this complex data set: (a) a stacked ensemble of models that automatically optimizes hyperparameters and manages the training of many models and (b) feature permutation importance to detect the most important features in the models. The major elements of this workflow are modular, portable, open, and cloud-based thus making this implementation a potential template for other applications. The models developed here predict that sediment organic matter chemistry is one of the most important features for predicting sediment respiration rate. Other larger-scale, important features fall into the categories of climatic, ecological, geological, and fluvial settings. Leveraging these larger-scale features to generate data-driven estimates of river sediment respiration rates reveals spatially consistent but heterogeneous patterns across the river network of the Columbia River Basin.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Classical field approximation of ultralight dark matter: Quantum break times, corrections, and decoherence

The classical field approximation is widely used to better understand the predictions of ultralight dark matter. Here, in this work, we use the truncated Wigner approximation method to test the classical field approximation of ultralight dark matter. This method approximates a quantum state as an ensemble of independently evolving realizations drawn from its Wigner function. The method is highly parallelizable and allows the direct simulation of quantum corrections and decoherence times in systems many times larger than have been previously studied in reference to ultralight dark matter. Our study involves simulation of systems in 1, 2, and 3 spatial dimensions. We simulate three systems, the condensation of a Gaussian random field in three spatial dimensions, a stable collapsed object in three spatial dimensions, and the merging of two stable objects in two spatial dimensions. We study the quantum corrections to the classical field theory in each case. We find that quantum corrections grow exponentially during nonlinear growth with the timescale being approximately equal to the system dynamical time. In stable systems the corrections grow quadratically. We also find that the primary effect of quantum corrections is to reduce the amplitude of fluctuations on the de Broglie scale in the spatial density. Finally, we find that the timescale associated with decoherence due to gravitational coupling to baryonic matter is at least as fast as the quantum corrections due to gravitational interactions. These results are consistent with the predictions of the classical field theory being accurate.

79 ASTRONOMY AND ASTROPHYSICS↗