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At least 721 records · Page 40

Random forest models accurately classify synthetic opioids using high-dimensionality mass spectrometry datasets

Detection of novel threat agents presents several challenges, a principle one being the development of untargeted methods to screen an increasing number of threat chemicals whose exact structures are unknown. With the use of Machine Learning (ML) tools, we can guide the development of analytical methods for broad-spectrum detection of unbounded threat chemical families in complex mixtures. Toward this goal, we used nominal mass and high-resolution mass spectrometry data for hundreds of synthetic opioids and non-opioid compounds. We tested two ML techniques, logistic regression and random forest, to develop models towards a practical, implementable method for opioid detection. We found that of these tested ML methods, random forest models resulted in the highest validation accuracy (95+%) for both nominal mass and high-resolution classification of opioids versus non-opioids, with low false positive and false negative rates. The RF models were then used to successfully predict the classification of 10 compounds—five opioids and five non-opioids not part of the training and validation analysis. This application of ML is a critical step towards the development of field-deployable nominal mass spectrometers with ML-driven analyses for classification of emergent threats.

Chemistry↗

Use of computer vision for analysis of image datasets from high temperature plasma experiments

Great strides have been made in improving the quality of x-ray radiographs in high energy density plasma experiments, enabled in part by innovations in engineering and manufacturing of integrated circuits and materials. As a consequence, the radiographs of today are filled with a great deal of detail, but few of these features are extracted in a systematic way. Analysis techniques familiar to plasma physicists tend toward brittle 1D lineout or Fourier transform type analyses. The techniques applied to process our data have not kept pace with improvements in the quality of our data. Fortunately, the field of computer vision has a wealth of tools to offer, which have been widely used in industrial imaging and, more recently, adopted in biological imaging. We demonstrate the application of computer vision techniques to the analysis of x-ray radiographs from high energy density plasma experiments, as well as give a brief tutorial on the computer vision techniques themselves. These tools robustly extract 2D contours of shocks, boundaries of inhomogeneities, and secondary flows, thereby allowing for increased automation of analysis, as well as direct and quantitative comparisons with simulations.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Computational toolkit for predicting thickness of 2D materials using machine learning and autogenerated dataset by large language model

The thickness of 2D materials not only plays a crucial role in determining the performance of nanoelectronic and optoelectronic devices but also introduces complexities in predicting volume-dependent properties, such as energy storage capacity, due to the intrinsic vacuum within these materials. Although a plethora of experimental techniques, including but not limited to optical contrast, Raman spectroscopy, nonlinear optical spectroscopy, near-field optical imaging, and hyperspectral imaging, facilitate the measurement of 2D material thickness, comprehensive data for many materials remain elusive. Over the past decade, the exponential proliferation of 2D materials and their heterostructures has outstripped the capabilities of conventional experimental and computational approaches. In this evolving landscape, machine learning (ML) has emerged as an indispensable tool, offering a scalable approach to augment these traditional methodologies. Addressing the critical gap, we introduce THICK2D—Thickness Hierarchy Inference and Calculation Kit for 2D Materials. This Python-based computational framework harnesses an autogenerated thickness database, developed using large language models, and advanced ML algorithms to facilitate the rapid and scalable estimation of material thickness, relying solely on crystallographic data. To demonstrate the utility and robustness of THICK2D, we successfully used the toolkit to predict the thickness of more than 8000 2D-based materials, sourced from two extensive 2D materials databases. THICK2D is disseminated as an open-source utility, accessible on GitHub at https://github.com/gmp007/THICK2D, and archived on Zenodo at https://10.5281/zenodo.11216648.

Ekuma, Chinedu E. (ORCID:0000000258527556)↗

Validation of the DESI 2024 Lyα forest BAO analysis using synthetic datasets

The first year of data from the Dark Energy Spectroscopic Instrument (DESI) contains the largest set of Lyman-α (Lyα) forest spectra ever observed. This data, collected in the DESI Data Release 1 (DR1) sample, has been used to measure the Baryon Acoustic Oscillation (BAO) feature at redshift z = 2.33. In this work, we use a set of 150 synthetic realizations of DESI DR1 to validate the DESI 2024 Lyα forest BAO measurement presented in [1]. The synthetic data sets are based on Gaussian random fields using the log-normal approximation. We produce realistic synthetic DESI spectra that include all major contaminants affecting the Lyα forest. The synthetic data sets span a redshift range 1.8 < z < 3.8, and are analyzed using the same framework and pipeline used for the DESI 2024 Lyα forest BAO measurement. To measure BAO, we use both the Lyα auto-correlation and its cross-correlation with quasar positions. We use the mean of correlation functions from the set of DESI DR1 realizations to show that our model is able to recover unbiased measurements of the BAO position. We also fit each mock individually and study the population of BAO fits in order to validate BAO uncertainties and test our method for estimating the covariance matrix of the Lyα forest correlation functions. Finally, we discuss the implications of our results and identify the needs for the next generation of Lyα forest synthetic data sets, with the top priority being to simulate the effect of BAO broadening due to non-linear evolution.

79 ASTRONOMY AND ASTROPHYSICS↗

Coincidence anomaly detection for unsupervised locating of edge localized modes in the DIII-D tokamak dataset

Using supervised learning to train a machine learning model to predict an on-coming edge localized mode (ELM) requires a large number of labeled samples. Creating an appropriate data set from the very large database of discharges at a long-running tokamak, such as DIII-D, would be a very time-consuming process for a human. Considering this need and difficulty, we use coincidence anomaly detection, an unsupervised learning technique, to train an ELM-identifier to identify and label ELMs in the DIII-D discharge database. This ELM-identifier shows, simultaneously, a precision of 0.68 and a recall of 0.63 (AUC is 0.73) on identifying ELMs in example time series pulled from thousands of discharges spanning five years. In a test set of 50 discharges, the algorithm finds over 26 thousand ELM candidates, more than 5 times the existing catalog of ELMs labeled by humans.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Overcoming sparse datasets with multi-task learning as applied to high entropy alloys

Abstract The design of novel High Entropy Alloys for use in high-temperature applications is an area of active interest due to their potential to provide exceptional properties compared to conventional alloys. Since the increased popularity of machine learning, an important cog in the design process has been training surrogate models on alloy properties. However, these Single-Task models are trained on individual mechanical properties and do not take advantage of the relatedness between properties. Multi-Task models can capture the interdependencies between tasks, leading to potentially more accurate predictions for all tasks. In this paper, we investigate if Multi-Task models can show improvement over Single-Task models when used for predicting the mechanical properties of these alloys. To ensure fair evaluation between the models, we apply L 0 regularization and skip connections to the models, which allows them to adjust the number of model parameters and depth for optimal performance. We find that the Multi-Task models can leverage task relationships to perform better than Single-Task models, especially for high amounts of missing data in the tasks. Furthermore, adding simple auxiliary targets can boost Multi-Task performance even further despite not being effective as input descriptors to single-task models themselves. We anticipate that the proposed strategies can achieve more accurate predictions and consequently enable better design capabilities for such data-constrained domains without incurring much additional computational cost.

Debnath, Arindam (ORCID:0000000194274499)↗

Pursuit of paired dijet resonances in the Run 2 dataset with ATLAS

New particles with large masses that decay into hadronically interacting particles are predicted by many models of physics beyond the Standard Model. A search for a massive resonance that decays into pairs of dijet resonances is performed using 140 fb –1 of proton-proton collisions at $\sqrt{s}$ = 13 TeV recorded by the ATLAS detector during Run 2 of the Large Hadron Collider. Resonances are searched for in the invariant mass of the tetrajet system, and in the average invariant mass of the pair of dijet systems. A data-driven background estimate is obtained by fitting the tetrajet and dijet invariant mass distributions with a four-parameter dijet function and a search for local excesses from resonant production of dijet pairs is performed. No significant excess of events beyond the Standard Model expectation is observed, and upper limits are set on the production cross sections of new physics scenarios.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Dark Energy Survey: Galaxy sample for the baryonic acoustic oscillation measurement from the final dataset

In this paper, we present and validate the galaxy sample used for the analysis of the baryon acoustic oscillation (BAO) signal in the Dark Energy Survey (DES) Y6 data. The definition is based on a color and redshift-dependent magnitude cut optimized to select galaxies at redshifts higher than 0.6, while ensuring a high-quality photo- z determination. The optimization is performed using a Fisher forecast algorithm, finding the optimal i -magnitude cut to be given by i < 19.64 + 2.894 z ph . For the optimal sample, we forecast an increase in precision in the BAO measurement of ∼ 25 % with respect to the Y3 analysis. Our BAO sample has a total of 15,937,556 galaxies in the redshift range 0.6 < z ph < 1.2 , and its angular mask covers 4 , 273.42 deg 2 to a depth of i = 22.5 . We validate its redshift distributions with three different methods: directional neighborhood fitting algorithm (DNF), which is our primary photo- z estimation; direct calibration with spectroscopic redshifts from VIPERS, which is a spectroscopic galaxy sample that overlaps with our BAO sample and is complete within our selection cuts; and clustering redshift using SDSS galaxies. The fiducial redshift distribution is a combination of these three techniques performed by modifying the mean and width of the DNF distributions to match those of VIPERS and clustering redshift. In this paper, we also describe the methodology used to mitigate the effect of observational systematics, which is analogous to the one used in the Y3 analysis. This paper is one of the two dedicated to the analysis of the BAO signal in DES Y6. In its companion paper, we present the angular diameter distance constraints obtained through the fitting to the BAO scale.

79 ASTRONOMY AND ASTROPHYSICS↗

Dark Energy Survey: A 2.1% measurement of the angular baryonic acoustic oscillation scale at redshift z eff = 0.85 from the final dataset

Here, we present the angular diameter distance measurement obtained with the baryonic acoustic oscillation (BAO) feature from galaxy clustering in the completed Dark Energy Survey, consisting of six years (Y6) of observations. We use the Y6 BAO galaxy sample, optimized for BAO science in the redshift range 0.6 < z <1.2, with an effective redshift at z eff = 0.85 and split into six tomographic bins. The sample has nearly 16 million galaxies over 4,273 square degrees. Our consensus measurement constrains the ratio of the angular distance to sound horizon scale to D M ⁡(z eff )/r d = 19.51 ± 0.41 (at 68.3% confidence interval), resulting from comparing the BAO position in our data to that predicted by planck Λ⁢CDM via the BAO shift parameter α =(D M /r d )/(D M /r d ) PLANCK . To achieve this, the BAO shift is measured with three different methods, angular correlation function (ACF), angular power spectrum (APS), and projected correlation function (PCF), obtaining α = 0.952 ± 0.023, 0.962 ± 0.022, and 0.955 ± 0.020, respectively, which we combine to α = 0.957 ± 0.020, including systematic errors. When compared with the Λ⁢CDM model that best fits planck data, this measurement is found to be 4.3% and 2.1⁢σ below the angular BAO scale predicted. To date, it represents the most precise angular BAO measurement at z > 0.75 from any survey and the most precise measurement at any redshift from photometric surveys. The analysis was performed blinded to the BAO position, and it is shown to be robust against analysis choices, data removal, redshift calibrations, and observational systematics.

79 ASTRONOMY AND ASTROPHYSICS↗

Measurement of the B 8 solar neutrino flux using the full SNO + water phase dataset

The SNO+ detector operated initially as a water Cherenkov detector. The implementation of a sealed cover gas system midway through water data taking resulted in a significant reduction in the activity of 222 Rn daughters in the detector and allowed the lowest background to the solar electron scattering signal above 5 MeV achieved to date. This paper reports an updated SNO+ water phase 8 B solar neutrino analysis with a total livetime of 282.4 days and an analysis threshold of 3.5 MeV. The 8 B solar neutrino flux is found to be (2.3⁢2$^{+0.18}_{-0.17}⁢$(stat)$^{+0.07}_{-0.05}$⁢(syst))×10 6 cm -2 s -1 assuming no neutrino oscillations, or (5.3⁢6$^{+0.41}_{-0.39}⁢$(stat)+$^{0.17}_{-0.16}$⁢(syst))×10 6 cm -2 s -1 assuming standard neutrino oscillation parameters, in good agreement with both previous measurements and standard solar model calculations. The electron recoil spectrum is presented above 3.5 MeV.

79 ASTRONOMY AND ASTROPHYSICS↗