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NASA NTRS1992

The ultraviolet-bright stars of Omega Centauri, M3, and M13

Two new UV-bright stars detected within 2 arcmin of the center of Omega Cen are spectroscopically investigated with the short-wavelength spectrograph of the IUE. The IUE spectra of the UV-bright stars UIT-1 and UIT-2 in the core of Omega Cen superficially resemble those of Population I mid-B stars. The absorption lines of the core UV-bright stars are significantly weaker than in Population I stars, consistent with their membership in the cluster. Synthetic spectra calculated from low-metallicity Kurucz model stellar atmospheres are compared with the spectra. These objects are insufficiently luminous to be classical hydrogen-burning post-AGB stars. They may be evolved hot horizontal branch stars which have been brightened by more than 3 mag since leaving the zero-age horizontal branch. It is inferred from the spectra and luminosity of the core UV-bright stars that similar objects could provide the source of the UV light in elliptical galaxies.

Landsman, Wayne B.↗

NASA NTRS1995

The tip of the red giant branch as a distance indicator for resolved galaxies. 2: Computer simulations

Based on both empirical data for the nearby galaxies, and on computer simulations, we show that measuring the position of the tip of the first-ascent red-giant branch provides a means of obtaining the distances to nearby galaxies with a precision and accuracy comparable to using Cepheids and/or RR Lyrae variables. We present an analysis of synthetic I vs (V-I) color magnitude diagrams of Population 2 systems to investigate the use of the observed discontinuity in the I-band luminosity function as a primary distance indicator. In the simulations we quantify the effects (1) signal to noise, (2) crowding, (3) population size, and (4) non-giant-branch-star contamination, on the method adopted for detecting the discontinuity,, measuring its luminosity, and estimating its uncertainity. We discuss sources of systematic error in the context of observable parameters, such as the signal-to-noise ratio and/or surface brightness. The simulations are then scaled to observed color-magnitude diagrams. It is concluded, that from the ground the tip of the red-giant-branch method can be sucessfully used to determine distances accurate to +/- 10% for galaxies out to 3 Mpc (mu approximately 27.5 mag); and from space a factor of four further in distance (mu approximately 30.6 mag) can be reached using HST. This method can be applied whereever a metal-poor population (-2.0 less than Z less than -0.7) of red-giant stars is detected (whose age is in the range 7-17 Gyr), whether that population resides in the halo of a spiral galaxy, the extended outer disk of a dwarf irregular, or in the outer periphery of an elliptical galaxy.

Madore, Barry F.↗

NASA NTRS2002

The Physical Origin of Galaxy Morphologies and Scaling Laws

We propose a numerical study designed to interpret the origin and evolution of galaxy properties revealed by space- and ground-based imaging and spectroscopical surveys. Our aim is to unravel the physical processes responsible for the development of different galaxy morphologies and for the establishment of scaling laws such as the Tully-Fisher relation for spirals and the Fundamental Plane of ellipticals. In particular, we plan to address the following major topics: (1) The morphology and observability of protogalaxies, and in particular the relationship between primordial galaxies and the z approximately 3 'Ly-break' systems identified in the Hubble Deep Field and in ground-based searches; (2) The origin of the disk and spheroidal components in galaxies, the timing and mode of their assembly, the corresponding evolution in galaxy morphologies and its sensitivity to cosmological parameters; (3) The origin and redshift evolution of the scaling laws that link the mass, luminosity size, stellar content, and metal abundances of galaxies of different morphological types. This investigation will use state-of-the-art N-body/gasdynamical codes to provide a spatially resolved description of the galaxy formation process in hierarchically clustering universes. Coupled with population synthesis techniques. our models can be used to provide synthetic 'observations' that can be compared directly with observations of galaxies both nearby and at cosmologically significant distances. This study will thus provide insight into the nature of protogalaxies and into the formation process of galaxies like our own Milky Way. It will also help us to assess the cosmological significance of these observations within the context of hierarchical theories of galaxy formation and will supply a theoretical context within which current and future observations can be interpreted.

Steinmetz, Matthias↗

NASA NTRSDate not supplied

Dissemination of Global Flood Severity and Surface Water Mapping using Remote Sensing Data to Global Stakeholders

Flooding is a natural event that occurs frequently with high severity worldwide, responsible for significant societal and economic impacts. Disaster managers face significant challenges managing essential information for preparedness, response, and recovery efforts. The development of an open access, global flood alerting system for effective identification of flood impacted areas, classification of potential impacts, and the formulation of effective emergency response measures requires the incorporation of a wide variety of flood models and remote sensing data sources from multiple platforms. NASA is currently funding projects focused on flood forecasting, post-event flood mapping, flood depth estimation and pre-event flood severity estimation using Earth observation (EO) datasets and derived flood products. A new initiative in the Disasters Program is underway to disseminate flood products from different hydrologic models and sensors to global stakeholders via Pacific Disaster Center’s DisasterAWARE®, NASA’s Disasters Mapping Portal and potentially other mechanisms. This initiative focuses on improving response capacity and use of EO products in near real-time by a broader community for resource planning in case of extreme events. As part of this initiative, we have deployed Model of Models (MoM) – an open-source ensemble approach, that integrates outputs from hydrologic models and EO data from optical imagery to assess flood severity daily at sub-watershed level globally. The MoM output is integrated with the incident event system of DisasterAWARE to generate flood severity risk and flood impact boundaries, which are disseminated via the DisasterAWARE platform to different stakeholders globally for decision-making and response efforts. The next step will focus on using MoM outputs to estimate flood depth and extent mapping using high-resolution Synthetic Aperture Radar imagery, impact assessment using optical imagery and population datasets, and damage estimation using critical infrastructure datasets, which would be disseminated via DisasterAWARE to decision-makers, emergency managers and first responders around the world.

flood↗

NASA NTRS1995

Synthetic properties of starburst galaxies

We present the results of an extensive grid of evolutionary synthesis models for populations of massive stars. The parameter space has been chosen to correspond to conditions typically found in objects like giant H II regions, H II galaxies, blue compact dwarf galaxies, nuclear starbursts, and infrared luminous starburst galaxies. The models are based on the most up-to-date input physics for the theory of stellar atmospheres, stellar winds, and stellar evolution. A population of massive stars is not only important in terms of its output of radiation but also via its deposition of mechanical energy. The output of radiative and mechanical luminosity is compared at various starburst epochs. In a supernova dominated instantaneous starburst, the mechanical luminosity can be as large as almost 10% of the total radiative luminosity. This occurs when most massive O stars have disappeared, and the synthetic spectrum in the optical and near-ultraviolet is dominated by B and A stars. During this epoch, the output of ionizing radiation below 912 A becomes very small, as indicated by a very large Lyman discontinuity and a very small ratio of ionizing over mechanical luminosity. We discuss the relevance of these results for the interpretation of starburst galaxies, active galactic nuclei, and the energetics of the interstellar medium.

Leitherer, Claus↗

DOE OSTI2024

Emission line predictions for mock galaxy catalogues: a new differentiable and empirical mapping from DESI

ABSTRACT We present a simple, differentiable method for predicting emission line strengths from rest-frame optical continua using an empirically determined mapping. Extensive work has been done to develop mock galaxy catalogues that include robust predictions for galaxy photometry, but reliably predicting the strengths of emission lines has remained challenging. Our new mapping is a simple neural network implemented using the JAX Python automatic differentiation library. It is trained on Dark Energy Spectroscopic Instrument Early Release data to predict the equivalent widths (EWs) of the eight brightest optical emission lines (including H α, H β, [O ii], and [O iii]) from a galaxy’s rest-frame optical continuum. The predicted EW distributions are consistent with the observed ones when noise is accounted for, and we find Spearman’s rank correlation coefficient ρs > 0.87 between predictions and observations for most lines. Using a non-linear dimensionality reduction technique, we show that this is true for galaxies across the full range of observed spectral energy distributions. In addition, we find that adding measurement uncertainties to the predicted line strengths is essential for reproducing the distribution of observed line-ratios in the BPT diagram. Our trained network can easily be incorporated into a differentiable stellar population synthesis pipeline without hindering differentiability or scalability with GPUs. A synthetic catalogue generated with such a pipeline can be used to characterize and account for biases in the spectroscopic training sets used for training and calibration of photo-z’s, improving the modelling of systematic incompleteness for the Rubin Observatory LSST and other surveys.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2026

Synthetic Biology of Plants and Microbes for Agriculture, Environment, and Future Applications

Agriculture is under pressure to provide food for a growing population and the feedstock required to drive the bioeconomy. Methods to breed and genetically modify plants are inadequate to keep pace. When engineering crops, traits are painstakingly introduced into plants one-at-a-time, combine unpredictably, and are continuously expressed. Synthetic biology is changing these paradigms with new genome construction tools, computer aided design (CAD), and artificial intelligence (AI). “Smart plants” contain circuits that respond to environmental change, alter morphology, or respond to threats. Further, the plant and associated microbes (fungi, bacteria, archaea) are now being viewed by genetic engineers as a holistic system. Historically, plant health has been enhanced by many natural and laboratory-evolved soil microbes marketed to enhance growth, provide nutrients, or confer pest/stress resistance. Synthetic biology has expanded the number of species that can be engineered, increased the complexity of engineered functions, controlled environmental release, and assembled stable consortia. New CAD tools will manage genetic engineering projects spanning multiple plant genomes (nucleus, chloroplast, mitochondrion) and the thousands of genomes of associated bacteria/fungi. Here, this review covers advanced genetic engineering techniques to drive the next agricultural revolution, as well as push plant engineering into new realms for manufacturing, infrastructure, sensing, and remediation.

Clauer, Phillip [Massachusetts Inst. of Technology↗

DOE OSTI2022

Targeting the Bet-Hedging Strategy with an Inhibitor of Bacterial Efflux Capacity Enhances Antibiotic Efficiency and Ameliorates Bacterial Persistence In Vitro

Persistence is a bet-hedging strategy in bacterial populations that increases antibiotic tolerance and leads to the establishment of latent infections. In this study, we demonstrated that a synthetic non-toxic taxane-based reversal agent (tRA), developed as an inhibitor of ABC transporter systems in mammalian cancer cells, enhanced antibiotic killing of persister populations from different pathogens, including Burkholderia, Pseudomonas, Francisella, and Yersinia. Acting as an inhibitor of bacterial efflux at 100 nM, tRA99020 enhanced antibiotic efficiency and suppressed the production of natural products of Burkholderia species polyketide synthase (PKS) function. We demonstrate that the metabolites produced by PKS in response to stress by different antibiotics act as inhibitors of mammalian histone deacetylase activity and stimulate cell death. Applying a single-molecule fluorescence in situ hybridization (smFISH) assay, we analyzed on a single-cell level the activation profiles of the persistence regulating pks gene in Burkholderia thailandensis treated with tRA99020 and antibiotics. We posit that a multi-pronged approach encompassing antibiotic therapies and inhibition of efflux systems and fatty acid catabolism will be required for efficient eradication of persistent bacterial populations.

59 BASIC BIOLOGICAL SCIENCES↗

NASA NTRS2024

Determining Simulation Fidelity Necessary for Evaluating Onboard Vehicle Capabilities and Crew Roles on Long Duration Exploration Missions Beyond Low-Earth Orbit

Identification of onboard vehicle capabilities and crew roles and responsibilities necessary for achieving effective human-systems collaboration will require iterative cycles of concept development and empirical evaluation of human performance in complex operations. This report presents the results of an effort to lay the groundwork for determining the level of fidelity of simulated environments most suitable for validating concepts and evaluating implementations of a new Human Systems Integration Architecture (HSIA) that will support the flight crew on long duration exploration missions beyond low-Earth orbit. To do that, we conducted a literature review on simulation fidelity and surveyed simulation capabilities inside and outside of NASA used in NASA-sponsored research. We also analyzed two International Space Station (ISS) vehicle anomalies to identify the types of scenario events and crew activities that may need to be simulated. Our survey findings reveal that most NASA simulation facilities are designed to achieve high physical fidelity while HSIA risk mitigation requires simulation emphasizing task and functional fidelity aspects. A trade analysis shows that, for standard and requirement development, evaluation conducted using synthetic task environments with inexperienced participants will support testing a wide variety of conditions and yield findings robust enough to be generalized to a wide variety of designs on which developed standards and requirements might be levied while allowing human performance standard measures to be collected using consistent methods across tasks and conditions. For technology/tool development, because findings will only need to be generalized to the actual target environment in which the technology/tool will be used, it is more suitable to evaluate the prototypes in a scaled world that preserves functional relationships present in the actual target environment with intended user populations. To wrap up, we give an overview of a well-known synthetical task environment in the space domain and discuss what it takes to construct a synthetic task environment.

simulation fidelity↗

DOE OSTI2024

Robust and optimal alignment of high-dimensional data using maximum likelihood estimation through a random sample consensus framework

Abstract Correcting spatial orientations of groups of high-dimensional data sets such that they are all in a consistent coordinate system is often a time-consuming and error-prone process. Automation of this process can be accomplished by using Generalized Procrustes Analysis to estimate the relative orientations among a population of high-dimensional data sets. A least squares Procrustes solution is applied through a maximum likelihood estimation and random sample consensus framework for robustness. The likelihood model is comprised of a mixture distribution where inliers are modeled using t -distribution and outliers from a uniform distribution. Applications will focus on a synthetic data set that emulates triaxial acceleration data and also real shock data from a population of triaxial accelerometers. Outliers represent either non-rigid body responses, environmental noise, and/or sensor and data acquisition issues. The intended application for the methodology is to robustly automate the rotation of populations of experimentally collected triaxial accelerometer data sets to a single global coordinate system.

LOSAC↗

NASA NTRS2024

Dynamic Orbital Slingshot for Rendezvous with Interstellar Objects

The solar sail “statite” concept presents a potential means to study interstellar objects (ISOs). A new class of asteroids and comets, ISOs offer a unique scientific opportunity to answer fundamental scientific questions about the origin of solar system volatiles, the compositions of exo-solar systems, and the transfer rates of material between solar systems. Unfortunately, they are also challenging to study due to their high excess energies and the short lead time offered by present detection infrastructure. By using its solar sail to “hover” in place, a statite is able to await the discovery of an ISO and, when called upon, convert the enormous potential energy of its stationary state into the velocity necessary to rendezvous with the targeted comet or asteroid. The investigation completed in Phase I focused on establishing the viability of the proposed mission concept. To do so, optimal trajectories to the two known ISOs were demonstrated and the relationship between statite placement and the resulting trajectory was explored. Post-launch trajectories from the Earth to strategic statite states were also shown to be feasible. Concurrently with these efforts, a thorough review of published ISO population estimates was conducted and preliminary steps towards creating a database of synthetic ISO ephemerides were completed. If renewed for a Phase II, this will be used to characterize the capabilities of the statite concept.

NIAC Phase I↗

DOE OSTI2024

A synthetic co-culture for bioproduction of ammonia from methane and air

Abstract Fixed nitrogen fertilizers feed 50% of the global population, but most fixed nitrogen production occurs using energy-intensive Haber–Bosch-based chemistry combining nitrogen (N2) from air with gaseous hydrogen (H2) from methane (CH4) at high temperatures and pressures in large-scale facilities sensitive to supply chain disruptions. This work demonstrates the biological transformation of atmospheric N2 into ammonia (NH3) using CH4 as the sole carbon and energy source in a single vessel at ambient pressure and temperature, representing a biological “room-pressure and room-temperature” route to NH3 that could ultimately be developed to support compact, remote, NH3 production facilities amenable to distributed biomanufacturing. The synthetic microbial co-culture of engineered methanotroph Methylomicrobium buryatense (now Methylotuvimicrobium buryatense) and diazotroph Azotobacter vinelandii converted three CH4 molecules to l-lactate (C3H6O3) and powered gaseous N2 conversion to NH3. The design used division of labor and mutualistic metabolism strategies to address the oxygen sensitivity of nitrogenase and maximize CH4 oxidation efficiency. Media pH and salinity were central variables supporting co-cultivation. Carbon concentration heavily influenced NH3 production. Smaller-scale NH3 production near dispersed, abundant, and renewable CH4 sources could reduce disruption risks and capitalize on untapped energy resources. One-Sentence Summary Co-culture of engineered microorganisms Methylomicrobium buryatense and Azotobacter vinelandii facilitated the use of methane gas as a sole carbon feedstock to produce ammonia in an ambient temperature, atmospheric pressure, single-vessel system.

Biotechnology & Applied Microbiology↗

DOE OSTI2024

Dynamic nitrogen fixation in an aerobic endophyte of Populus

Biological nitrogen fixation by microbial diazotrophs can contribute significantly to nitrogen availability in non-nodulating plant species. In this study of molecular mechanisms and gene expression relating to biological nitrogen fixation, the aerobic nitrogen-fixing endophyte Burkholderia vietnamiensis, strain WPB, isolated from Populus trichocarpa served as a model for endophyte–poplar interactions. Nitrogen-fixing activity was observed to be dynamic on nitrogen-free medium with a subset of colonies growing to form robust, raised globular like structures. Secondary ion mass spectrometry (NanoSIMS) confirmed that N-fixation was uneven within the population. A fluorescent transcriptional reporter (GFP) revealed that the nitrogenase subunit nifH is not uniformly expressed across genetically identical colonies of WPB and that only ~11% of the population was actively expressing the nifH gene. Higher nifH gene expression was observed in clustered cells through monitoring individual bacterial cells using single-molecule fluorescence in situ hybridization. Through 15 N 2 enrichment, we identified key nitrogenous metabolites and proteins synthesized by WPB and employed targeted metabolomics in active and inactive populations. We cocultivated WPB Pnif-GFP with poplar within a RhizoChip, a synthetic soil habitat, which enabled direct imaging of microbial nifH expression within root epidermal cells. We observed that nifH expression is localized to the root elongation zone where the strain forms a unique physical interaction with the root cells. This work employed comprehensive experimentation to identify novel mechanisms regulating both biological nitrogen fixation and beneficial plant–endophyte interactions.

15 N-tracking metabolomics↗

NASA NTRS2023

Geometric Analysis and Visualization of Maxillofacial Anthropometry

As part of head borne systems, the maxillofacial and mandibular components are critical for Soldier protection in extreme and dynamic conditions. Often this equipment must not only cover the lower face of the wearer, but also accommodate motion of the lower jaw and resultant deformation of the face shape. Although the application is different, head borne equipmentdesigned for astronauts has similarly critical design requirements including comfort and protection from other environmental hazards while allowing for maximum performance. To improve the design of such systems and to ensure adequate accommodation of the user population, NASA Johnson Space Center is collaborating with the U.S. Army’s Development Command Soldier Center (DEVCOM SC) to statistically analyze facial landmark and measurement data from large Soldier anthropometric databases ( ANSUR 1988 and ANSUR II). Anthropometric measurements were incorporated from 5383 males and 3594 females for analysis, including individuals aged 17-58 across a range of races. Facial landmarks were analyzed, specifically the 3D coordinates of the Menton, Prementon, Gonion, Tragion, Stomion, Zygion, Pronasale, and Subnasale. These data were statistically correlated with demographiccharacteristics, such as sex and population origin. A statistical model of the lower head-face surface geometry is currently in development to describe the variance of head and face shape across the population. The model will be able to visually show the statistical trends of the different shapes and sizes of the head, along with the synthetically represented boundary cases. The specific analytical methods and outcomes will be detailed in the final proceeding. This study will provide a more comprehensive assessment of how face shape varies across the military population compared to traditional linear measurements. The outcome of this study is expected to provide critical insight and recommendations for improved protective equipment design and development, not only with Soldiers but also astronauts in future exploration missions, as well as first responders and others that require critical equipment fitted to the maxillofacial and or mandibular region.

W Green↗

DOE OSTI2024

Evaluating disease surveillance strategies for early outbreak detection in contact networks with varying community structure

Disease surveillance systems allow public health agencies to respond to emerging diseases before they become widespread. Developing such systems requires identifying optimal ways to monitor in the context of an epidemic outbreak; this problem is known as sensor selection. Contact networks represent the dynamics of interaction in a population and are used to model how a disease spreads in a population and to explore strategies of sensor selection. We evaluated five sensor selection strategies on their ability to provide an early warning of a COVID-like outbreak in synthetic contact networks encapsulated in four network scenarios. Three of these scenarios assessed different aspects of community structure. The fourth scenario employed a contact network representing the population and interactions of 6.8 million people in New York City, constructed from an agent-based simulation using census and transportation data. This scenario exemplifies how sensor selection strategies may perform in a real-world, urban context. Our findings suggest that the choice of the optimal strategy depends heavily on the community structure of the network. Strategies that select highly connected nodes or maximize network coverage are the optimal surveillance strategy for outbreak detection in many network community structures. However, a naive implementation of these strategies may fail to provide an early warning at all—including in the New York City scenario. Moreover, these methods are impractical for real-world use as they require knowledge of the underlying contact network. Instead, a selection strategy that starts with a set of random nodes and then performs a random walk through a chain of neighbors reliably provides early warnings without requiring prior knowledge of the network. We find this method, called “random chain”, to be the most pragmatic for implementation in a real-world disease surveillance context.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2025

Statistical estimates of the binary properties of rotational variables

ABSTRACT We present a model to estimate the average primary masses, companion mass ranges, the inclination limit for recognizing a rotational variable, and the primary mass spreads for populations of binary stars. The model fits a population’s binary mass function distribution and allows for a probability that some mass functions are incorrectly estimated. Using tests with synthetic data, we assess the model’s sensitivity to each parameter, finding that we are most sensitive to the average primary mass and the minimum companion mass, with less sensitivity to the inclination limit and little to no sensitivity to the primary mass spread. We apply the model to five populations of binary spotted rotational variables identified in ASAS-SN, computing their binary mass functions using RV data from APOGEE. Their average primary mass estimates are consistent with our expectations based on their CMD locations ($\sim 0.75 \, {\rm M}_{\odot }$ for lower main sequence primaries and $\sim 0.9$–$1.2 \, {\rm M}_{\odot }$ for RS CVn and sub-subgiants). Their companion mass range estimates allow companion masses down to $M_2/M_1\simeq 0.1$, although the main sequence population may have a higher minimum mass fraction ($\sim 0.4$). We see weak evidence of an inclination limit $\gtrsim 50^{\circ }$ for the main sequence and sub-subgiant groups and no evidence of an inclination limit in the other groups. No groups show strong evidence for a preferred primary mass spread. We conclude by demonstrating that the approach will provide significantly better estimates of the primary mass and the minimum mass ratio and reasonable sensitivity to the inclination limit with 10 times as many systems.

Phillips, Anya (ORCID:000900051914974X)↗

NASA NTRS2017

Synthetic Scenarios from CMIP5 Model Simulations for Climate Change Impact Assessments in Managed Ecosystems and Water Resources: Case Study in South Asian Countries

Increasing population, urbanization, and associated demand for food production compounded by climate change and variability have important implications for the managed ecosystems and water resources of a region. This is particularly true for south Asia, which supports one quarter of the global population, half of whom live below the poverty line. This region is largely dependent on monsoon precipitation for water. Given the limited resources of the developing countries in this region, the objective of our study was to empirically explore climate change in south Asia up to the year 2099 using monthly simulations from 35 global climate models (GCMs) participating in the fifth phase of the Climate Model Inter-comparison Project (CMIP5) for two future emission scenarios (representative concentration pathways RCP4.5 and RCP8.5) and provide a wide range of potential climate change outcomes. This was carried out using a three-step procedure: calculating the mean annual, monsoon, and non-monsoon precipitation and temperatures; estimating the percent change from historical conditions; and developing scenario funnels and synthetic scenarios. This methodology was applied for the entire south Asia region; however, the percent change information generated at 1.5deg grid scale can be used to generate scenarios at finer spatial scales. Our results showed a high variability in the future change in precipitation (-23% to 52%, maximum in the non-monsoon season) and temperature (0.8% to 2.1%) in the region. Temperatures in the region consistently increased, especially in the Himalayan region, which could have impacts including a faster retreat of glaciers and increased floods. It could also change rivers from perennial to seasonal, leading to significant challenges in water management. Increasing temperatures could further stress groundwater reservoirs, leading to withdrawal rates that become even more unsustainable. The high precipitation variability (with higher propensity for localized intense rainfall events) observed in the region can be a key factor for managed ecosystems and water management and could also lead to more incidence of severe urban flooding. The results could be used to assess both mitigation and adaptation alternatives to reduce vulnerabilities in managed ecosystems (agricultural and urban) and water resources.

agriculture↗

DOE OSTI2023

An optogenetic toolkit for light-inducible antibiotic resistance

Abstract Antibiotics are a key control mechanism for synthetic biology and microbiology. Resistance genes are used to select desired cells and regulate bacterial populations, however their use to-date has been largely static. Precise spatiotemporal control of antibiotic resistance could enable a wide variety of applications that require dynamic control of susceptibility and survival. Here, we use light-inducible Cre recombinase to activate expression of drug resistance genes in Escherichia coli . We demonstrate light-activated resistance to four antibiotics: carbenicillin, kanamycin, chloramphenicol, and tetracycline. Cells exposed to blue light survive in the presence of lethal antibiotic concentrations, while those kept in the dark do not. To optimize resistance induction, we vary promoter, ribosome binding site, and enzyme variant strength using chromosome and plasmid-based constructs. We then link inducible resistance to expression of a heterologous fatty acid enzyme to increase production of octanoic acid. These optogenetic resistance tools pave the way for spatiotemporal control of cell survival.

59 BASIC BIOLOGICAL SCIENCES↗