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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 73 records · Page 4

wavess 1.2: presenting an HLA-aware within-host virus sequence simulation framework

Motivation Understanding how virus sequences are shaped by selection can inform vaccine design and transmission inference. Modeling within-host evolution to interrogate these questions requires a detailed mechanistic framework that accurately captures sequence diversification. The CD8 + cytotoxic T-lymphocyte (CTL) response plays an important role in immune-mediated selection and can leave strong signatures in virus sequences; however, existing sequence-based within-host virus modeling frameworks do not explicitly include a human leukocyte antigen (HLA)-aware CTL response. Results We extended our previously published within-host sequence evolution simulator, wavess, to include an explicit CTL response, and share a method for identifying HLA-specific CTL epitopes given a founder virus sequence. We also updated the model to permit a variable recombination rate, which allows for modeling non-adjacent genes, segmented genomes, and recombination hotspots. These extensions to wavess allow for more accurate simulation of viruses and virus genes, particularly in regions of the genome where the immune response is dominated by CTLs (rather than antibodies). It also provides the foundation for investigations of how these newly-added biological mechanisms influence within-host evolution. Availability and implementation The core of wavess is written in Python 3, with helper functions written in R. It is available at https://github.com/MolEvolEpid/wavess.

60 APPLIED LIFE SCIENCES↗

(GO) 2 -SIM: a GCM-oriented ground-observation forward-simulator framework for objective evaluation of cloud and precipitation phase

General circulation model (GCM) evaluation using ground-based observations is complicated by inconsistencies in hydrometeor and phase definitions. Here we describe (GO) 2 -SIM, a forward simulator designed for objective hydrometeor-phase evaluation, and assess its performance over the North Slope of Alaska using a 1-year GCM simulation. For uncertainty assessment, 18 empirical relationships are used to convert model grid-average hydrometeor (liquid and ice, cloud, and precipitation) water contents to zenith polarimetric micropulse lidar and Ka-band Doppler radar measurements, producing an ensemble of 576 forward-simulation realizations. Sensor limitations are represented in forward space to objectively remove from consideration model grid cells with undetectable hydrometeor mixing ratios, some of which may correspond to numerical noise. Phase classification in forward space is complicated by the inability of sensors to measure ice and liquid signals distinctly. However, signatures exist in lidar–radar space such that thresholds on observables can be objectively estimated and related to hydrometeor phase. The proposed phase-classification technique leads to misclassification in fewer than 8 % of hydrometeor-containing grid cells. Such misclassifications arise because, while the radar is capable of detecting mixed-phase conditions, it can mistake water- for ice-dominated layers. However, applying the same classification algorithm to forward-simulated and observed fields should generate hydrometeor-phase statistics with similar uncertainty. Alternatively, choosing to disregard how sensors define hydrometeor phase leads to frequency of occurrence discrepancies of up to 40 %. So, while hydrometeor-phase maps determined in forward space are very different from model reality they capture the information sensors can provide and thereby enable objective model evaluation.

54 ENVIRONMENTAL SCIENCES↗

Verification and Validation of Simulation Framework for Analysis of Traumatic Brain Injury

Many U.S. troops deployed in Iraq and Afghanistan have suffered blast-related, closed-head injuries as a result of being within non-lethal distance of a detonated improvised explosive device (IED). Consequently, we are conducting a modeling & simulation investigation, coupled with clinical diagnostics of brain injury, into the mechanisms associated with blast to the human head that give rise to traumatic brain injury (TBI). In particular, we are attempting to identify the specific conditions of focused stress wave energy within the brain, resulting from blast loading to the head, which define a threshold for persistent brain injury. As these threshold injury conditions are identified, one can then employ a modeling & simulation toolset to assess the efficacy of various helmet designs to mitigate blast exposure that would otherwise lead to traumatic brain injury. In this report, we describe our efforts to establish the role of stress wave interactions in the genesis of traumatic brain injury (TBI) from exposure to explosive blast. We discuss our effort to correlate simulation predictions with clinical assessments of TBI subjects whose brain injuries have been diagnosed by advanced magnetic resonance imaging techniques. This work has been funded through the U.S. Naval Health Research Center, Office of Naval Research, Mr. James Mackiewicz, project funding manager.

59 BASIC BIOLOGICAL SCIENCES↗

TRANSFORM - TRANsient Simulation Framework of Reconfigurable Models

Existing development tools for early stage design and scoping of energy systems are often time consuming to use, proprietary, and do not contain the necessary function to model complete systems (i.e., controls, primary, and secondary systems) in a common platform. The Modelica programming language based TRANSFORM tool (1) provides a standardized, common simulation environment for early design of energy systems (i.e., power plants), (2) provides a library of baseline component modules to be assembled into full plant models using available geometry, design, and thermal-hydraulic data, (3) defines modeling conventions for interconnecting component models, and (4) establishes user interfaces and support tools to facilitate simulation development (i.e., configuration and parameterization), execution, and results display and capture.

Greenwood, Michael S↗

5G Enabled Transformative Co-design and Co-simulation Framework for Grid Decarbonization and Modernization

5G is a breakthrough technology to enable a fully mobile and connected society, and a 5G-enabled digital continuum will be one of the critical foundations for clean energy economy and grid modernization. The clean energy transformation not only requires innovative manufacturing, algorithm, application, and cross-domain co-simulation, but also a systematic evaluation and comprehensive support on the microelectronic and architectural computing customization to enable and maximize the high renewable penetration in the future power grid. The co-design of decarbonized grid, reliable yet efficient communication, and affordable yet ubiquitous computing will unlock the potential of almost any available tools for the undergoing clean energy transformation. 5G is also an opportunity to rethink the paradigm of infrastructure planning, as computing will be one of the core services for society alongside electricity and communication services.

5G↗

DTLMod: A simulation framework for in situ workflow optimization

In situ processing workflows have become essential for coping with the explosion in data volume and velocity in large-scale scientific computing, providing domain scientists with early insights at runtime. Multiple frameworks implement this paradigm through a data transport layer (DTL), offering different data access modes and deployment schemes, but researchers currently lack the appropriate tools to assess design and deployment options before committing to costly real experiments. We introduce DTLMod, an open-source simulated DTL that enables performance evaluation of in situ workflow configurations at scale. Built on SimGrid, it links into any SimGrid-based simulator and is available in C++ and Python. We evaluate DTLMod along four axes: scalability (tens of thousands of simulated processes across interconnected clusters in seconds, with linear memory scaling), versatility (three implementation variants trading fidelity for speed), accuracy (simulated times faithfully reflecting real behavior), and practical utility (two use cases demonstrating evidence-based workflow design decisions).

Suter, Fred [ORNL] (ORCID:0000000319021955)↗

Multiscale Simulation Framework for Coupled Fluid Flow and Mechanical Deformation

Our work in this project is aimed at making fundamental advances in multiscale methods for flow and transport in highly heterogeneous porous media. The main thrust of this research is to develop a systematic multiscale analysis and efficient coarse-scale models that can capture global effects and extend existing multiscale approaches to problems with additional physics and uncertainties. A key emphasis is on problems without an apparent scale separation. Multiscale solution methods are currently under active investigation for the simulation of subsurface flow in heterogeneous formations. These procedures capture the effects of fine-scale permeability variations through the calculation of specialized coarse-scale basis functions. Most of the multiscale techniques presented to date employ localization approximations in the calculation of these basis functions. For some highly correlated (e.g., channelized) formations, however, global effects are important and these may need to be incorporated into the multiscale basis functions. Other challenging issues facing multiscale simulations are the extension of existing multiscale techniques to problems with additional physics, such as compressibility, capillary effects, etc. In our project, we explore the improvement of multiscale methods through the incorporation of additional (single-phase flow) information and the development of a general multiscale framework for flows in the presence of uncertainties, compressible flow and heterogeneous transport, and geomechanics. We have considered (1) adaptive local-global multiscale methods, (2) multiscale methods for the transport equation, (3) operator-based multiscale methods and solvers, (4) multiscale methods in the presence of uncertainties and applications, (5) multiscale finite element methods for high contrast porous media and their generalizations, and (6) multiscale methods for geomechanics.

97 MATHEMATICS AND COMPUTING↗

Strain localization and dynamic recrystallization in polycrystalline metals: Thermodynamic theory and simulation framework

We describe a theoretical and computational framework for adiabatic shear banding (ASB) and dynamic recrystallization (DRX) in polycrystalline materials. The Langer-Bouchbinder-Lookman (LBL) thermodynamic theory of polycrystalline plasticity, which we recently reformulated to describe DRX via the inclusion of the grain boundary density or the grain size as an internal state variable, provides a convenient and self-consistent way to represent the viscoplastic and thermal behavior of the material, with minimal ad-hoc assumptions regarding the initiation of yielding or onset of shear banding. Here, we implement the LBL-DRX theory in conjunction with a finite-element computational framework. Favorable comparison to experimental measurements on a top-hat AISI 316L stainless steel sample compressed with a split-Hopkinson pressure bar suggests the accuracy and usefulness of the LBL-DRX framework, and demonstrates the crucial role of DRX in strain localization.

36 MATERIALS SCIENCE↗

TRANSFORM - TRANsient Simulation Framework of Reconfigurable Models

A Modelica based library for modeling thermal hydraulic energy systems and other multi-physics systems. Existing development tools for early stage design and scoping of energy systems are often time consuming to use, proprietary, and do not contain the necessary function to model complete systems (i.e., controls, primary, and secondary systems) in a common platform. The Modelica programming language based TRANSFORM tool (1) provides a standardized, common simulation environment for early design of energy systems (i.e., power plants), (2) provides a library of baseline component modules to be assembled into full plant models using available geometry, design, and thermal-hydraulic data, (3) defines modeling conventions for interconnecting component models, and (4) establishes user interfaces and support tools to facilitate simulation development (i.e., configuration and parameterization), execution, and results display and capture.

Greenwood, MichaelS. [Oak Ridge National Lab. (ORN↗

Integration of Silica in G4CMP for Phonon Simulations: Framework and Tools for Material Integration

Superconducting detectors with sub-eV energy resolution have demonstrated success setting limits on Beyond the Standard Model (BSM) physics due to their unique sensitivity to low-energy events. G4CMP, a Geant4-based extension for condensed matter physics, provides a comprehensive toolkit for modeling phonon and charge dynamics in cryogenic materials. This paper introduces a technical formalism to support the superconducting qubit and low-threshold detector community in implementing phonon simulations in custom materials into the G4CMP. As a case study, we present the results of a detailed analysis of silica phonon transport properties relevant for simulating substrate backgrounds in Beryllium Electron capture in Superconducting Tunnel junctions (BeEST)-style experiments using G4CMP. Additionally, Python-based tools were developed to aid users in implementing their own materials and are available on the G4CMP repository.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Modeling and simulation framework for dynamic strain localization in elasto-viscoplastic metallic materials subject to large deformations

This study describes a theoretical and computational framework for the treatment of adiabatic shear band formation in rate-sensitive polycrystalline metallic materials. From a computational perspective, accurate representation of strain localization behavior has been a long-standing challenge. In addition, the underlying physical mechanisms leading to the localization of plastic deformation are still not fully understood. The proposed framework is built around an enhanced-strain finite element formulation, designed to alleviate numerical pathologies known to arise in localization problems, by allowing a localization band of given finite width (weak discontinuity) to be embedded within individual elements. The mechanical threshold strength (MTS) model is used to represent the temperature and strain rate-dependent viscoplastic response of the material. This classical flow stress model employs an internal state variable to quantify the effect of dislocation structure evolution (work hardening and recovery). In light of growing evidence suggesting that the softening effect of dynamic recrystallization may play a significant role, alongside thermal softening, in the process of shear band formation and growth, a simple dynamic recrystallization model is proposed and cast within the context of the MTS model with the aid of the aforementioned internal state variable. An initiation criterion for shear localization in rate and temperature-sensitive materials is introduced and used in the present context of high-rate loading, where material rate-dependence is pronounced and substantial temperature increases are achieved due to the dissipative nature of viscoplastic processes. In addition, explicit time integration is adopted to facilitate treatment of the dynamic problems under consideration, where strain rates in excess of 10 4 s –1 are typically attained. Two series of experiments are conducted on AISI 316L stainless steel, employing the commonly used top-hat sample geometry and the Split-Hopkinson Pressure Bar dynamic test system. Axi-symmetric finite element simulation results are compared to cross-sectional micrographs of recovered samples and experimental load–displacement results, in order to examine the performance of the proposed framework and demonstrate its effectiveness in treating the initiation and growth of adiabatic shear banding in dynamically loaded metallic materials. These comparisons demonstrate that thermal softening alone is insufficient to induce shear localization behaviors observed in some materials, such as stainless steel, and support the hypothesis that dynamic recrystallization and/or other softening mechanisms play an essential role in this process.

36 MATERIALS SCIENCE↗

Real-time Simulation Framework for Hardware-in-the-Loop Testing of Multi-port Autonomous Reconfigurable Solar Power Plant (MARS)

Multiport autonomous reconfigurable solar power plant (MARS) has been proposed for integrated development of photovoltaic (PV) and energy storage system (ESS) that can connect to high-voltage direct current (HVdc) and alternating current (ac) transmission grid. To de-risk the development of this complex integrated system that consists of hundreds to thousands of power electronics modules, a controller hardware-in-the-loop (cHIL) test setup will be extremely beneficial. The cHIL testing can be used for evaluation of modules as well as the hierarchical control system in MARS. With the unique configuration of power electronics modules in MARS, it becomes necessary to develop custom-designed real-time simulation models in the cHIL setup in absence of off-the-shelf models. In this paper, high-fidelity dynamic model of MARS, control algorithms at the lower level, and required communication algorithms are developed and optimized for real-time performance in the cHIL setup. Real-time experimental results from the cHIL are provided.

Dong, Zerui↗

Multiscale Wildfire Simulation Framework and Remote Sensing

Wildfire as one type of climate extreme events causes huge socioeconomic losses and damages. Large wildfires (i.e., generated pyrocumulonimbus (PyroCb)) can inject tremendous amounts of smoke into the stratosphere, where black carbon and organic carbon aerosols can persist months to years and influence climate by imposing a significant reduction in the radiative forcing like that associated with large volcanic eruptions or proposed via climate interventions such as geoengineering. Both observations and numerical modeling results clearly indicate an increasing trend in wildfire frequency and intensity in many regions during the recent decades with climate change. However, current understanding of wildfire remains largely uncertain owing to limitations of modeling capabilities in representing the multiscale wildfire physics and dynamics and a scarcity of observations constraining important wildfire and environmental variables. This study primarily aims to improve the wildfire simulation capabilities in the state-of-the-art climate model by filling in two major gaps: (1) model resolution is typically too coarse to resolve fine scale processes associated with fires, and (2) chemistry and aerosol processes in fire smoke are poorly represented.

54 ENVIRONMENTAL SCIENCES↗

A Blockchain Based Co-Simulation Framework for Integrating DERs into Wholesale Electricity Markets

As the number of distributed energy resources (DERs) continue to increase across energy-delivery systems, there remains a need for integrating their capabilities into traditional grid operations. In this paper, a blockchain-based solution is proposed to facilitate FERC's Order No. 2222 implementations. The presented use-case enables small-scale DERs to participate in wholesale market operations through DER aggregators, while also enabling local distribution system operators to enforce distribution system constraints in a secure and traceable manner. The presented use case is built around the Unified Testing Platform (UTP) being developed as a part of the Blockchain for Optimized Security and Energy Management (BLOSEM) project. This is a multi-lab effort intended to simplify the deployment of blockchain-powered grid solutions by enabling the integration of simulation tools, and blockchain technologies through the use of system-agnostic interfaces that provide a modular, interoperable, and reusable connectivity layer.

blockchain testing↗

A Blockchain Based Co-Simulation Framework for Integrating DERs to Wholesale Electricity Markets: Preprint

As the number of distributed energy resources (DERs) continue to increase across energy-delivery systems, there remains a need for integrating their capabilities into traditional grid operations. In this paper, a blockchain-based solution is proposed to facilitate FERC's Order No. 2222 implementations. The presented use-case enables small-scale DERs to participate in wholesale market operations through DER aggregators, while also enabling local distribution system operators to enforce distribution system constraints in a secure and traceable manner. The presented use case is built around the Unified Testing Platform (UTP) being developed as a part of the Blockchain for Optimized Security and Energy Management (BLOSEM) project. This is a multi-lab effort intended to simplify the deployment of blockchain-powered grid solutions by enabling the integration of simulation tools, and blockchain technologies through the use of system-agnostic interfaces that provide a modular, interoperable, and reusable connectivity layer.

blockchain testing↗

Multiscale Framework Simulates Utility-Scale Wind Plant in Its Natural Environment. First-ever simulation could lead to a vital understanding of wind plant performance

Wind plant performance depends on local environmental conditions—and understanding those conditions is crucial to research on wind plant dynamics. Factors such as sloping terrain, surface type and cover, atmospheric heating and cooling, and weather events all play a role in determining the winds that turbines convert into power. However, most models used for wind plant design and operation do not sufficiently account for environmental effects. This can limit our understanding of wind plant dynamics and, thus, our ability to design, site, and operate wind plants for maximum power production and reliability. To meet this challenge, Arthur and other LLNL researchers partnered with scientists at the National Center for Atmospheric Research; the University of California, Berkeley; the University of Colorado, Boulder; and Texas Tech University to develop and demonstrate a novel, mesoscale-tomicroscale wind plant modeling framework.

17 WIND ENERGY↗